TCONS_00052287 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052287
Unique NameTCONS_00052287
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052287 ID=TCONS_00052287|Name=TCONS_00052287|organism=Clytia hemisphaerica|type=transcript|length=2119bp
AAATTTGCTTTGCTAATATCGATagtCATGAAGTGGAATGTGTGAAAGCC
ATTGTTCAGTGCCCAAATAATCCTtgtttggaaaaaatgacaCGTGAGAC
AGCTAACCATCACGTGACCAAAGAATGTGTTTATCGACCAATCGAATGTC
CGTTCGCCGAAGCTGGCTGCCGATACCCTGTCAATCGTACCAATTACGAA
CAACACCAACGTGAATACATGGAAATGCACTTGGCGCTTGTTATGAAAGA
ATTGCGTGCCGTAAAAGAGGACAGTAGACAACAGGTAACTCAGCTCCGAA
ACGAATTGGACGCGACCAAAAATGAAATTGCAAGTTTACGAACCGAGTTG
GCCGATCAACACCGAATCGATGAACTCGGTCGAAACTTACGTAGCTCaat
ggataaaatctttatttccATGAAAGCTCTAGGAGGCAAAATTCATGACG
ATATTGTAGAGCTGAATGCCACTATTCGCGAGAAAGTGATCAGTTTTGAT
AAGTCGTATGCCCTCTTGGAAGGCAGGCTTGGTACCTTTAATCTATGGAT
TAAAAAACGAGTCGACGAAATGGCTGATCACTTTCGCGGTCAGGTTTTAC
AGTATACCGACCTAGATATGGAGCAAGTGTTCACCGACAATATTCGTAAG
CAAACCGAAAATAACGAGTCGGCGACAAATTCAACAGTCGTCTTTAACGA
CGATTTAAGAGAGAAATTACGACTAACGAGTTACTTGAATGAACACCGAG
AATTATCGGGGAAACTACATTTCGCATTAGCGAATATTCAAGCGGCGCTG
TTGCAACCAACGTACACCGAACGGTACCGTGGAATGTTGGATTTTATGGA
AGTAAACAAGAAGATACGTACAGAGAATGGTTATTATGTGATTAAAGTAC
AAATGTTGGATATCTTTGAAGACGAATGGAATATAGTGATTCTGAAAAAA
CAAACTATGTTTACAGAGtataaaaacacaaaacatCAAGATTTACTTAT
TAACCATTACGCTAAAACTATTTCCATTTATTTCCTGGATGAGGGTGCAT
TTCTTCATGATGTACCCTCAGTGAATGTGTATAGCCCGCGTAAGATGTAT
AAATTAATGTTACCAAGTGTACAAAGAGATGATATGAGATTCAGAATCAA
TTTTACAACGTTGTCGACTTCGaatttgattcaaaatggtTTTTTGTTGT
TGCGAATTCAAGAGGTCCCTAAAATGCTGGTAGACACATCGTTCTTCACG
CGAAGTACAACTATTTCATGAGTTACTTGTAtattaattaaaaacATTTA
TCTACTTtgcatatattttatttttatcaagtTTAGCTATAATTGAGGAC
TCAAGAACCTCTGTTCCAAAAGATTTGACGGTCCGTACTTTTTCCAGCAT
TTCTCTTGaggcgaaaaaaaatattccttGACTCttaattaccttaaggg
aacttattttggcgggaactaattttgacgagcggcaaaaatgctgaaaa
cttttaattttggcgagaacttatttttgcgaatgacagcgtaaatctgt
tctattttgccttatttgaagctttttttgtgaactcaagaagttattta
gctaaaataccaaaaaatttaattttagcgagaacttttttttggcgagt
gagcaaaatatataattttggcgaatttagacaaaattcgccaaaataag
ttcccttaaggtagtcacTCTAAAACCTCTCTAACCAACTCCAAGTTCCT
TGCTGTTTGGTTCATGGAGACTTTGTTAGAGACATATTTTCTGTAGATAT
TTTACGTaattttttcaggcttaaatctTCTTGTGATGTTCTTAGTTTTC
TTATAAGGCTTGTGTGACCTTGAAAGATTTCTCAGTTTCAGAGtctcaga
ttgttcttattttgttcataGATTGAGcctcatttttttcttataaaata
ctGCATTATTCCACAACGTATTTTATTCTTCATATACTCTACTAATTCAT
ATTTAAATAGATTGAAATCATgttatcataatttttttgtataagTATTT
CCATACAAAATTctttgtaaaaaactttttgcgaGAGTGGCAAAGGCCta
aaagcataaaaaataaaat
Run BLAST on NCBI

transcript from alignment at scaffold_213:1106510..1123984+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052287 ID=TCONS_00052287|Name=TCONS_00052287|organism=Clytia hemisphaerica|type=transcript|length=17475bp|location=Sequence derived from alignment at scaffold_213:1106510..1123984+ (Clytia hemisphaerica)
AAATTTGCTTTGCTAATATCGATGTAAGGACTAAAAGGATGGCGTTAAGG
ATTACCTCTTTTCCCTAATTTATTCAACTCAACCTCAACCATAAAAAACA
AAGTAtataatattttgttcttatttttagagtCATGAAGTGGAATGTGT
GAAAGCCATTGTTCAGTGCCCAAATAATCCTtgtttggaaaaaatgacaC
GTGAGACAGTAAGGGAATTATTGTTAAATCTAGATTGACGGTATAAAAAG
TGAGGTCTCAATCGCTATGGAATAAttgcaatttttaaaacaaatcaaca
aaacatAACAGTGAGCGCTTTTTCATTCAATTCTATTTAACAATAGAACG
TTTTCTTTCTAAGATCACATAATACaaagggacgagatggagtttttaca
agctctcatTTGATTAGGTTGGTCGATAaaaacttttgtctttttcaaaa
gaatgcgtcatttttattacttcaaatgacaattaacttatcttataaaa
actccatctcatctgaataCAAACCACTCATTTAGAATGCTTTAGCGTAA
AAATAGTGTTGCCCAATCGTGCAAGACCAGCACATGTCTTAAATCACTAA
CTTCTGTAATCCCTGGAGATTATCAATCCAAATCAATTGCAGCCTTTTGA
ACTGAGTTTtctgaaaagtggtaccctattGATCCCACTGCTCATATGTT
TGATGTAAATCATCATACTTTTTAACAGAAAACAccattgtatttgaatt
tacCTGCATCTAGTAGCCAACTTTTCTAAGAATTCAGATCgagatggtgg
atatagcttaTTCAAAGGTTTCAAATACAGGTTAATTAATACACTTTCCT
ATAAGTACATTTGATGTCAGTGCAATGGTCAAAAAATGAAGTCGAAACTT
AAAATAAGTTTTTGACTATTCTATATTACATACAGTATGGTTTGAccaca
ctcttttttataagcatactagAAAATCGGGTCGTAGCTCtgtatgctta
gcaaaatctcattttcagccttaatttatgcttatttatatgcttatact
tcgttttgttgattttcattgGGTTCatagaaatttcgaatttttaagtt
tttaattgattcggctcaaaaaataacaatttttttgtaatttggcgCCG
CATGtgaaaatctttggtctaagagctaaaacagctttaaaagctttaaa
ttatGCTCATTTTTTTACCgagtttgagcctaagtatgcttataaacgtt
atgcttacaaaaaaaaattgagtttatcaaaaatgaaatttgttgTGATT
CTTTTCCTCAAAAAGATAAATACAATGCCAACATTTATGTAGGATAAGCA
CATTACCTATTGTCTAAACATCAGTTTATCTATAGAATTTATCCAAAAAT
TTAACAATAGCTTTTCCTTCATTAGAAAATGATCCATCTTCTATTTTCTT
CGGTCTTTCTTGAATGCATCGTCTTAAAACAAGATAAGTTGACCTGGCTG
TAagcttttgaaaacttttatagTCAGCAAGTGAACTTGCTTTCTCAATA
TTTTTAATAATGTTTAACTGGAGTCGTTCGAGTCCATACTGGTCTGCCAA
AAGGAGCCCTTGAATCTGATTTTCGGCTTTATCTATTCCCCACATCGTgc
ttttatcttttttgttgAAATGATTTGATTGGATGAGGTACTCTTCTGCT
CGTTTGATTGGCCATTTAATCTCGTAGTGTGTCAATAAAGATAGGAGCTG
CTCGAAATCTGTGCTCcctaaaattaaattgaattcaTTGTGACTATTGG
TTCTCGCAGTGTGTCAATGAGGATTAGAACTGTTCGAAATCTGTTTCATA
TGAAACGTATACCTTACTTCAAGTACTACAAGAAATTGGTAAACATTTGG
ACACATTTCTCATTTTCGCGATCATTGCGGGTAAGttttactgaccttta
tatatcatGGCCTGAGCTATATCCAGCTTATTTGATCGcagtttttcgaa
aaatgataCCCTAATGATAGCACTACTCGATGTGGGTCAATttataattc
aaagaaattttccatttaaaaagttttcaccctcattgagtagtgctacc
attagggttcCACTTTCAAAaatctccgatcaaagatttcaGTGGTATCG
TCTCTTCGAATATCTATTAAAGTTCAGtaataattttctgacttgaaaac
caTGGAATTCAAATACCCAGCTATATCAATCCCAATcgagttttgttgtt
tttaacaCCAGTGTCTAACAAAAACCTACtcgatctgtgagaagggggtg
gtgcaatcccagctggcacacaacgttgtttcaacgtttttttgtttaca
cgttatatggacgttgtgaacgttagaaaaatgtcgaaacaacgttgtgt
gccagctgggaaagtcatgaaaattttcaaaggtaaaaagtgtctttttc
tttgttaatgTTTGTTAAAGTTTCATAAGTCAGGCCATTTGTGGGAATTT
TCATTAGCGAAAATTTAGTCTGCTAAATTGATGGACGAATCGGGCNAagc
ttttgaaaacttttatagTCAGCAAGTGAACTTGCTTTCTCAATATTTTT
AATAATGTTTAACTGGAGTCGTTCGAGTCCATACTGGTCTGCCAAAAGGA
GCCCTTGAATCTGATTTTCGGCTTTATCTATTCCCCACATCGTgctttta
tcttttttgttgAAATGATTTGATTGGATGAGGTACTCTTCTGCTCGTTT
GATTGGCCATTTAATCTCGTAGTGTGTCAATAAAGATAGGAGCTGCTCGA
AATCTGTGCTCcctaaaattaaattgaattcaTTGTGACTATTGGTTCTC
GCAGTGTGTCAATGAGGATTAGAACTGTTCGAAATCTGTTTCATATGAAA
CGTATACCTTACTTCAAGTACTACAAGAAATTGGTAAACATTTGGACACA
TTTCTCATTTTCGCGATCATTGCGGGTAAGttttactgacctttatatat
catGGCCTGAGCTATATCCAGCTTATTTGATCGcagtttttcgaaaaatg
ataCCCTAATGATAGCACTACTCGATGTGGGTCAATttataattcaaaga
aattttccatttaaaaagttttcaccctcattgagtagtgctaccattag
ggttcCACTTTCAAAaatctccgatcaaagatttcaGTGGTATCGTCTCT
TCGAATATCTATTAAAGTTCAGtaataattttctgacttgaaaaccaTGG
AATTCAAATACCCAGCTATATCAATCCCAATcgagttttgttgtttttaa
caCCAGTGTCTAACAAAAACCTACtcgatctgtgagaagggggtggtgca
atcccagctggcacacaacgttgtttcaacgtttttttgtttacacgtta
tatggacgttgtgaacgttagaaaaatgtcgaaacaacgttgtgtgccag
ctgggaaagtcatgaaaattttcaaaggtaaaaagtgtctttttctttgt
taatgTTTGTTAAAGTTTCATAAGTCAGGCCATTTGTGGGAATTTTCATT
AGCGAAAATTTAGTCAGCTAAATTGATGGACGAATCGGGCTGAGTGGGTG
CGTGGTGGAGTGGGTACATGTGAGTAAGTGGGTAAATTTAAAGTGTTTTT
GCGTGGTCAAATTTTGAGCATGGGTAAATCTTTTGGCGCTGGTGACTGTA
ATTATGTTGATATCCTTGAAATGTATAGAATAGAGTATAAAGGATAAACT
AAATTATCAAACTTtggacccacgcaaaaatattagactcacacaaaaaa
tcttttggtcCATGCAAAAAAAagacgcgaaaaaaaattaccaaaccACC
CCCCACCCACATTCTAACCCAACCAACCATGTAGCGAAAGTGAGTCGCga
aaattgtgaaatttctAAATCCGTTAAATCAGAAATAAGCTGTAGGCTTA
CCTGTTAGTTCAGCAGGATGACTTGCATAGATAAGATGTAAAAACATTTT
AACCGTCGCTTTGTCATAAGAACCACTAAACAGTGGTGATTTCGAATCAC
CTAAACCCATGCTTGAAGAAAGGTCCTGTTGCCATTCtgttctcaaaatc
taaaagaaAATGCGATGAGAAAATTATAAGACTGGCTGGCCTCAACTTGT
GTACTGAAGCTGACAATgtttttgtcatattttgaatttctttcgTGATT
TCTATGAAGAAAATTCCTTAGTCTATGTTTTTCTACGtgcaaaaaaattc
ctaaacaTTTCCATACTATTAACATTTGCTTCTGATTATGAATAAAATTG
AGGTTGTTTCGAATTGGCCgggaggggggtacttaggcaaaaatgggttt
TGGGTATGCGCGGACGGTAAGGGTTTTtccacctttcaaagtctctctaa
ggatcggaaaaatcagaaaatttcaaggtaGTTTCTCTGAGGGttggaaa
attcacgatttttaggatttttttttgttttcgagagaaaaaaatgtata
aggcgaaaataaaaaaaatgtagtgtttccggaaaccggccgggtgaaac
aaaaaatttttctgacgcggccgcagactatgggttcatcataaagaaaa
tcaagttgaccattcaagctatcaaacgtcttTTGGTTtgatattcccgc
ttgtaaatcaattttgttcgttagtagttgatacattagtattcagatTT
ACTTCATACCGTTTGCACATAAAGgatatctttaaagttctatttcaatg
atcttaagttatcaaaaatagcaaaaaataatgttttttccggccggccg
cataggagcttttttccttcatccgcattccggaaacacaacattttatt
tattttcgcCTTTAAGGGtaagacttttttcaaaaatggaagaacatttt
tcaaaaaagtctctctaagggtcaccttttcagctaaaatccacacatac
ccctcatccgcgAACTCTTTACCCTTTATCTTTTCAGTCCACGTGCACGT
gtctttcttaatttttggctCTGGCGACTTCTTTTGTCGTGAAATTATTG
TAAATAAAATAAGTTGCCTACCTCAGAGTAGAAGCCTAGTACTTTAGAAT
GGACCGAAAATGTCTTCCCTTCTTTGGTTGGAATCTCCATATCAGAATCT
TGTCTGTCGTTGAAAAGTTGTTCATCTAACGGTCTGCTCTCTATATCCTG
AAAGAAATGATAAATAGTTTATTGAACTTGGGCACTTCATTGGGGGATTG
GAGGATATATTGTTGGCGAAGGGGgtgtagtgaaaaatctacaaaatttg
ctcTTGTCCAAGGGaggtcaactgatgcttttTCAAGGGGTTTAAGTTGC
TGTCTGTGAGTAATTTTaattgtccagggggtcaactgatgcttgtacGG
GAGTTAAACCTGCTGTCCCtgggtaattttgaatatcaTGGGGTTAAACC
TGTTGTCTGGGGGTCAAAAGTTGCAatgtttaggggggggggggNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggggggggggt
tgaattTCCACAAATTGTTATATCCCcatattttttctggaagagctcct
tttgttgtatttttttcacCAACCtgaaatatcgactctatcatctattg
gttagaagtgtcgtaaaacttgaatttaaccaatagaatggcttaaTTTT
GCTTCAGAGTGGAACGGAACCGTTACGTGTGAACGTGGTCTATATACATG
GGTTACCTTTGTCTGCTTTATTCCTTCCTCTGTCTGCCGAAACATAGTGT
TAAAGATTTCCAAAGTGGTTTTGACATGGTTTGTATCGACTGCTTGTGTC
ACTCGACACATGGctaatttgattttgaaatcatCGTGAAGATCGTCAAA
CCCTTCCAATCGTTGGAGCTCATTGATTGGACAATAATTGAAATTGATCA
ATTTTAATGTCAACTCGTGGAATTTATACTTGAAACCAATCAGCAtgcct
taaaaatgaaaaatttcaaagaatttcaaaatttcaaaaatgtggGGTTT
TCGGGATAAATCGGATTTGTGTCAGAACACTAAAAAGGCTTCTTTAATCA
GAAAATGGTTGACTCAGCAAGAAACGGAAGAAACTAGCAattacctcacc
aaaaaccgggattatCAACTCCGTTTCTTTGTGAGCTCCACTTTGATGAT
TCTTGAagatagaagcctttcaagtttTGACGCTAATTCGATTTTTTGCT
AaatctttttgctttgaaatgctaaatgctaaaaaaaGCTACGCTCCAGC
ACAGAGACATTTGGAGATTTgcgtcaaaatttttgagacACGGAACTTTG
CCTAACCGTAACAAACCGAACTTcgcgttatcttttcagtcagcgaagaa
gagATTGGTACAGGCTAAGTACAGGCTAGTGAGATACTCGCTATTACCTT
TGATGTTTCTTTCGCAATTCTCATAATCTATAGCCTCTTCCTCATCTTCT
TTGTTTACGaatccgccatcttgtttttgaGTGAAGTAAGAGTCGAGAGT
CCGCGAAATCCATTCTGCATCGTATTTCTGGCCAAGTGTAATCAAACGGT
CAATTCTTTCTTCGTCTAATGGATAAAAAAGATTATGGGAAACTTCATCT
ACATTGACCCCAAAGATatgctattcatgatatgcaacactggagagtct
tctgagaattttcaaaaagttcaacccaatacgtcacttaaacgaTAGAA
AAATTGACGTATTGGGttgaactttttagaaattcttGGAAGATTCTCta
gtgttgcatatcatgaattaaaaaAGGGATGTAGAACGTCTTATATTTCT
AGAAGTTATCCAACTAAAACAAATAGTTAATTTTTTGTGTCTAATGGATA
TGAAAGAAATATGGGAATCCTATACTGGTGGACGAACACCATATCTTTGG
ACCCCCAGAGTACGCTAGCCAAAAGGaatctaaaaaattgaaagtttttt
aaaacttgTCCAACCAAACAGAAGGTCTATTTATTCTTTGTGTAATTATA
TTATTAGAATTTTGACGATTTAATTTTCGAATTCACTTTAAACGATAGAA
ATGGTTGATTCTTATATGACCCAAATCGTGAATCTACAATTTTCCAATGC
TTATTCTTAATTTAACACTATATTGGACTCTCGCCAATTCGAACatctat
tattcgaatccttCTATTTAATTTCCAATTTGCATAATACACACGTCCAT
TTTTTCCAGATCACTTACAGACGGCTCATAAATATACGTCACAAAAAAGc
gtttatttgacgtcaaaaaatTTTTTTTTGTTTAAAAAAACTGAAATTTT
TTTAGCTAGAAATATACCTTGAAAACGGCCctggccgaaacatgttggaa
atttctagcatctaatggtatttttgtctcgatcctccgtccgataTACA
ATTTGCATAATATATGGAGAAGGGTTTGGACAAGATAGATCGGAGACGTA
TTGTATAAGTTTTAGCCTCAAATATTGGCTAGTCTGTTATAAGTACAAGT
TTTGGGGTAAAATTGTCCCAACCGAAGTATTCCTTTCTGGGTTTCAGTTG
TTATTTAAGTTCCCATACCTATAACATCGATGTCTATCAAATGAAAATGT
TCTggataaaacaacaaaaagaaggTCATCCAGTCTTCAACTTCTGCCTT
CTCATCAACAACCAATGAAATCTCTTGAATCTGTCCATCTCCATGGTGAT
TTTGTTGTTTGTCCTCATGTAAAATATCACGAAATTTTGTTGAATAAAAA
GATAAGATTTGTTGATGGAGATAAAATGTTTCATCTTGAATTTTGATCGC
GATGTCTGTTGTTTCTGAGCGTTTGAACGGATGTTCCattttgattcaaa
attcaCCTTGCTTATTCTCTACTATAAAAAGGTATTGGggacatagattt
ataaagcccaaagggctagatgtcgtacttttgctgaaaagtgtaccgtg
gttaggtaggaatcCTACTTAGGCCACGTggcattacaatagaatttcag
cgcttgatcAATCAGAAGCATCgcgggttttcaaaaacaatagcaacaat
atttttcccaatgttcactttttttgcccacgatggcttaaagccccctt
aaagcacgacatctagccctttgggctttataaatctgtgattGGATACA
ATTTTACCAGGGTTGAACCAGGTCAAATGTCGATCCTCTTATGACACAAA
TGAATAGGTAAATTCACTGTTTGATACGATTTGATTGCTGAGACCTTTTT
TTATACTCTTATTTTGTGATTCCCCTCCGTCTAGCATGATTCGACCGATC
AAAAAATTTactctgaagatttttttaaagaaaaaattaggaAATAATAG
TACAAGGTTTTCTAATGTATAAATGTTGCTTTATTTAGTACGGAGATAAT
TAAAAGTTCTCTATCAAGGAGGCTACAGTTAATTTTTCAATgctttaaaa
taatattttttgtgagTTTTCTTTTACCAAGAATACAAATACTGAAATCA
TTTTGTTATAAATCTTTTCAACaattatttatcattttaatttcatttca
ttgttgagaaatatttttgcgaATATCAAaagtttcttacaaaaaatggt
aaatttgaGATACGGGAAATTCGAGAAACCTACTCTTGTCAAGGAATGTT
TATTTCCTCACACCCTACACTTTcagcaaattttagaatttgCTTGTTTC
ATCTTGTTTCGTCTCCATATTTCGATTCGTCTGATCTTTGTAGCTTAGGT
GTCCACTTTTTTATGGGAAGAGTTTTATATGAAGGCAATGctgaaatttt
gatcaaaagCTATAAGAACACATTAAGAACAGCCTAAGCCTCAGACTTCA
AAAGCTAAGAAATCACTGATTGAAGACCATGTAAAGAAATCAAGTGCATA
ATATTAAACATCTTAAGAGCATTTcagcttgaaaaaaaagaaatcgagAA
CAAATGAACTTAACCTAAATTTggctggttcttataaaaagcttGTATTT
TTATCTTACATTGTAATATTAGATCATACTCTATTATGATAACTTTGTCC
CCCCCAAAAGTAACATAAACTTTCTCTTCGTGTAATACGCTGTCAACCTT
TACAGACTGGGTTTGAGTTTCGAAATGTATTTGCATTAACATTCTCATAA
AACATAATTGTGACTTCATTTTCATGTAAATTTCGTTACCAGACCCCTTA
AAAGCCAACCGCGCCTTTAACGGTTGATATGTACGTCCTCGTCTAAGCGA
GTGGCTTGAATTTTGTGAAATCGTATGTGAATAATGTATTAATTCTGAAT
TCCAGAGGGATTTAACACTAACATTGATGCTGTATTCTAATGTATTAACC
TCTCTCAAGAGGGGTTTGATTGAGTTGATGAGGGTTGTACTGACAAATAT
TGCCCGAGATCAATTAAAGATCCATCTTGCGAGGTCGTTGCGCTGACCGA
TGACCGTTGATTGTAtcaccagagtgtatctcacgtttattgcttcatag
tacactctgtgcgcattgtttgcttgatgaaaaaattcccgtacggagac
ctctgcgatgaaatATGATCTACAGAGGCAACTCTGTGCAATGTAAACCT
GTTGTCTTGTGAAAAGTTAAAGCCAGTTGTGTTGCGTCAAAACTCGTACA
AACAGCTTCATAAAATAAACCGGTTGACAATGCCTGAAGTTCCACGTATT
TTCAGTAAAAAAGCCGAAAGGAGAATGTAACAACACAAAAGATATGACCA
TCTTAGCAGATGATGCACAGCTTTTTCTGGAATACACTAGTTTAACTATT
TCAAAAACTGTCTGAAAGGTATTTTCTGAGTAAGATGAAATTCGTTTCTT
GTTAGGATTTATTAACATTGAATTTCTATTTCACACCATCAGGCTAACCA
TCACGTGACCAAAGAATGTGTTTATCGACCAATCGAATGTCCGTTCGCCG
AAGCTGGCTGCCGATACCCTGTAAGTGGACTCTTCATTTGATTTACATAT
TGTTAAAACAGCGCACAACCAAAATTAGTGTGAGGTACGCTCAAGCCACA
AAGGGTCCCTtttacaccctcgaaagtctttTAAATCGACATCCTCAGGG
tcataaattttcttaatttcgactaaaatttcaaaattttggctgtaaaa
acgtaagaaaagtggcaaaattttcaaaattcagtctcttaaagggtcta
tttttcaaactttggctCAGATNgtggcaaaattttcaaaattcagtctc
ttaaagggtcgatttttcaaactttggctCAGATATACCCCTCATCTCGC
GAACTTAGCACCCACACACACTGGGCACACCATTCATGATATTAATTACG
TAACGTTTTCTACGGAAAATCAGCAGGTTTTTTGCCGGTATTGGCAAACT
TAAGTTGATTTTTTCTagcttaaatttgccactactacTGCTATTAACCG
GGGTGTTTACATAGAGAACATTTCGAATATCATCATTTTCTCAAAAGAAC
TTTATTCAGAAATATTCGAGAAAGCTTTGATTGCCATTGCAAAGAATTGC
TTATTTTACTCCCAGGGGCCGCTACACACTTCCGTAAGTTGGTCtgatgt
cgacatccctcttctaatttcgtcacccttctttagagataggaataata
ggaatgtcagaattgctgattgaaactaattttctttgcttagcaatcag
ttgaggagtccatcagtgattctgaccttagTAGTAGGATAAACTGAATA
GCATTATTATAGTTTATACAAAGCAATAATATTATCTCttaatttaaagt
tcgggtgaGAATGGCATTTCCATTTTAttccattgaatattttgttgaat
atttcgattctgAGGGGGGTTTAGTTACTTGCAGATTATATTCTCAGCCT
TCTTGTAAAATGTTTGAGCTTTATTTTGATCCTGAGATAATAAGATCGTC
CTAAGTCTAAAGTCCAATGTTGAAACTCGACATTCCAGAAGCAAATCAGA
GCACTTTTGGCTCAGGGAACTCCcgtttttctcaaatattataacTTTAA
TTATGGAATTGccatggtttcagcccccccccttaaaataaggggtgatt
taaaatttagagaaaaacacAAAGGGCAAAACTGTTAAAAACTGAGAAAT
AAGGGGGGACTTGGTCTCAAGGGTCAAATGGAAGCCCTTGCTACTTGAGG
GGGGAGTAATCTTGTTCCTTTCTGTTCTAACGGCTGATATTTCTTCgtca
cttttttcatttttacctcattctaaaataattttgttcctGCTGTGTCC
CGATCTTGTAAAGCATCTAATGCTCCAATCACATTTCAGCTATggaattt
tctatttctatttgaatgttacattcgaaaatattttcgtttcCTTGGTG
TGTCATCATCCTACACTACATCTAAGGCTCCACCAATCACATTTCAGTGA
TTCGAATGCTTACATTTTtaaaagacattcaatttttctgttcTGCTTCT
ATATGGAATAGTTTCCAGTTAAAGGAGAAAACGATTTTAGAAAAGTGTAT
TGTAGGGATTTTTATACCAGGTATATTGTTTATTGCAGTTTATCATACCC
TactaatattttaaatttgctgATTTAGAAAAGTATATAAtgataagtaa
tagttatcggacagttgcgagaacaatatgagaaatattttctgagattt
ttccgtccaatattttccgagcctttaggcgaggaaaatatgcggaaaat
ccggaacgagtgaaatatttccatattgtacgagcaaatgtctgataact
ggtttatcggtgacccaaaaaatgcacttttgtGTTGGAAcaaagcgcag
ggcacttttgtagtgcaaagtgacgttagattgcttctaccgctacaatg
caacaacaccttttcgtcaatttatatttttacatgtaaaatacaagatt
tgtactctttttaaccaatcagattgcagatattttttggatcgccgata
aaaaactttttcacaaaagaaagaaatatcagTAGAAGAGCTTCCTCAAA
AGATTGAGCTGATGCTGATGCACCACCAACCAATAAACAAAGAATAAAAA
GCGGAACCCAGAACTAGGGTTTTCTCCCGgatggcattcaaaaattgtgt
gaggttttcaaaaacagcaaaaaaaaaagaaatttgaatatctcttttga
aaaacaaaaacttcagaatattggttctaaagtaggttgaagtaggttga
aaatttttttttttgtaaaatgggccaaaattgcggcacaaatcaagaaa
cccactatgttgataaaacagcagccacaaatttgtccaatgagtaaaaa
tcatttttttcagatgaaactcgtagcaaaagggtttatccacaaaatat
aaaaaatggaaccaaaattattgggtcattgggctagaattgcggctcaa
agctgaaattttttttcatatatgctttgattgaagccacattttaagcc
cattgaaaactCTGCAgtcacaaattaaacccataagtatcttaaAACCT
TAataaactaccaatttcaagaaaaacggttaaaagaaatattgaagtct
taaagcaggacagcacataagCCAACCCTAAATATGCCAACTAATACTTN
aaacggttaaaaaatattgaagtcttaaagcaggacagcacataagCCAA
CCCTAAATATGCCAACTAATACTTATATGTAACAGCTCAGAGGGTTATAG
TTACAAAAAATGGTATAGTGGCAGCCACAAAATGTACACtctttcttaaa
ataacactgtATTGTGTCAGATTATTGTGTTTGCTTTGCTTTGCAAATAT
tcatgttttaaaaacaaaacccaacctggaatgtgtaaattgataaatta
gtgattgaagtatgattgaagccacattttaagcccattgaaaaccgcag
ccacaaattaaaaccataagtatctttatcagacctttaaaactaccaat
ttcaagaaaaacggttaaaaaatattgaagttttaaagcaggacagcaca
tgTAAGCCAACCCGTTGAGTGAGACACAGTGACATACAGCCACAAAACCT
GCCCTCACTTTGCcatcttatatttcaagacTGAATCACTCTACTTCAAA
GAGGGCCTCATTTTTGGAAATCTcatcaattttcttattttatgtaattt
tgtactacacagcagccacaagaatgtcaacgctgtgggctaaaaagtgg
ttgttattgaaaacctcactttttggggttctatttttgaatgcaatccC
TGCAATGTGTTTATGGACTAATTTCTCGCTTGTCTCTACACCtcaaaaat
agaccttttttcataGGCCACCCTGttaaataattatgtagtccagcaga
aaaacaatgataaaaccatgtataattattacaatatgcatgatacagta
attatgcatggctctatcattgtttttatggctggactacataattattc
aacaggacgtcctctttgaaaaaaggtctattaaggGCATGTATACATAA
GAGTCTTGCAAATTTAAGGGGGGAGTAAAACTTAAGGGGCACCTCAAAAC
AATCTTTAAGCTTTAAGGGGGGATAAATTGATAAGGGGTGATTTGTGTTT
TAAGGGGGGACTCAAAATCATGGATGAAACCATGATTGCAGACGATATTT
ACACGAAGACTTCACTAGAGTTCATTGCACGAAACAAAAGTACAGAAAAG
ATAGGTTCTACTACGAGACAGGGTTGTTATCAGTGTACAAAGAAATCTGA
AATAAGAAACATAACAGAGATAGAACAGAAAAATTGCATGTAAAGATTGA
TCCAGGCTGATTTTTGCACACAGACTCAATGCACGAGACAAGacaataag
aacatgttaaattTGCATGTAAAGACAGCACCAATTAAAGACATTTTGCA
CGGACtaacccagccggcacacaacgtcaaaacaacgtccatttgacatt
cataacgtccaaataacgttatttgaacgttaaaacaacgttgtgtgcca
gctgggaatgcTCTAGATAGAGATATGAAAAGCGTCAAGTTGAAATTGCA
CGTAAAGGCAGCAAGTAAAGAGATTTGCACGGAATTAATCTCACACGAGA
CTTTAAAACATATGGCTTTTAAACCGGCTAAACATTTATTTCAAAACTTC
AGGTCAATCGTACCAATTACGAACAACACCAACGTGAATACATGGAAATG
CACTTGGCGCTTGTTATGAAAGAATTGCGTGCCGTAAAAGAGGACAGTAG
ACAACAGGTAACTCAGCTCCGAAACGAATTGGACGCGACCAAAAATGAAA
TTGCAAGTTTACGAACCGAGTTGGCCGATCAACACCGAATCGATGAACTC
GGTCGAAACTTACGTAGCTCaatggataaaatctttatttccATGAAAGC
TCTAGGAGGCAAAATTCATGACGATATTGTAGAGCTGAATGCCACTATTC
GCGAGAAAGTGATCAGTTTTGATAAGTCGTATGCCCTCTTGGAAGGCAGG
CTTGGTACCTTTAATCTATGGATTAAAAAACGAGTCGACGAAATGGCTGA
TCACTTTCGCGGTCAGGTTTTACAGTATACCGACCTAGATATGGAGCAAG
TGTTCACCGACAATATTCGTAAGCAAACCGAAAATAACGAGTCGGCGACA
AATTCAACAGTCGTCTTTAACGACGATTTAAGAGAGAAATTACGACTAAC
GAGTTACTTGAATGAACACCGAGAATTATCGGGGAAACTACATTTCGCAT
TAGCGAATATTCAAGCGGCGCTGTTGCAACCAACGTACACCGAACGGTAC
CGTGGAATGTTGGATTTTATGGAAGTAAACAAGAAGATACGTACAGAGAA
TGGTTATTATGTGATTAAAGTACAAATGTTGGATATCTTTGAAGACGAAT
GGAATATAGTGATTCTGAAAAAACAAACTATGTTTACAGAGtataaaaac
acaaaacatCAAGATTTACTTATTAACCATTACGCTAAAACTATTTCCAT
TTATTTCCTGGATGAGGGTGCATTTCTTCATGATGTACCCTCAGTGAATG
TGTATAGCCCGCGTAAGATGTATAAATTAATGTTACCAAGTGTACAAAGA
GATGATATGAGATTCAGAATCAATTTTACAACGTTGTCGACTTCGaattt
gattcaaaatggtTTTTTGTTGTTGCGAATTCAAGAGGTCCCTAAAATGC
TGGTAGACACATCGTTCTTCACGCGAAGTACAACTATTTCATGAGTTACT
TGTAtattaattaaaaacatttatctACTTTGCACATACAGTGAACTCTg
acattcgaatctttctataattcaaactaaAACATTGGTCCTCCGGCTGG
AAAGTAGAAAGTCTTTCCGTGACTTGGTCCCTTGGAGTTCGAATTacctt
aattttaattttattcttcAAATTTATTGAGAACTCAAAAAAAACCTCTT
TTCAACTCGAATGGCTTTTCTGATCCCTTGCGAGAATGTAGACCTAGCTT
GACTCCTAATACCTAATTCTTATtaaaaatcgttttttttttttgttcat
aatTTTAATGTGCTTAAATATCTGCTTGTCCTTCTTAGTTTGCCTAAAAT
GTTTGGTTGTCTTCCTTTAGTTTAGTTTCTACTTGTATATTAATTACAAA
CATTTATCTACTTtgcatatattttatttttatcaagtTTAGCTATAATT
GAGGACTCAAGAACCTCTGTTCCAAAAGATTTGACGGTCCGTACTTTTTC
CAGCATTTCTCTTGaggcgaaaaaaaatattccttGACTCttaattacct
taagggaacttattttggcgggaactaattttgacgagcggcaaaaatgc
tgaaaacttttaattttggcgagaacttatttttgcgaatgacagcgtaa
atctgttctattttgccttatttgaagctttttttgtgaactcaagaagt
tatttagctaaaataccaaaaaatttaattttagcgagaacttttttttg
gcgagtgagcaaaatatataattttggcgaatttagacaaaattcgccaa
aataagttcccttaaggtagtcacTCTAAAACCTCTCTAACCAACTCCAA
GTTCCTTGCTGTTTGGTTCATGGAGACTTTGTTAGAGACATATTTTCTGT
AGATATTTTACGTaattttttcaggcttaaatctTCTTGTGATGTTCTTA
GTTTTCTTATAAGGCTTGTGTGACCTTGAAAGATTTCTCAGTTTCAGAGt
ctcagattgttcttattttgttcataGATTGAGcctcatttttttcttat
aaaatactGCATTATTCCACAACGTATTTTATTCTTCATATACTCTACTA
ATTCATATTTAAATAGATTGAAATCATgttatcataatttttttgtataa
gTATTTCCATACAAAATTctttgtaaaaaactttttgcgaGAGTGGCAAA
GGCCtaaaagcataaaaaataaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033078XLOC_033078Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052287-exon-scaffold_213-1491911889:1106510..1106532TCONS_00052287-exon-scaffold_213-1491911889:1106510..1106532Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1510915933:1106510..1106532TCONS_00052287-exon-scaffold_213-1510915933:1106510..1106532Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1575043694:1106510..1106532TCONS_00052287-exon-scaffold_213-1575043694:1106510..1106532Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1491911889:1106640..1106717TCONS_00052287-exon-scaffold_213-1491911889:1106640..1106717Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1510915933:1106640..1106717TCONS_00052287-exon-scaffold_213-1510915933:1106640..1106717Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1575043694:1106640..1106717TCONS_00052287-exon-scaffold_213-1575043694:1106640..1106717Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1491911889:1117352..1117429TCONS_00052287-exon-scaffold_213-1491911889:1117352..1117429Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1510915933:1117352..1117429TCONS_00052287-exon-scaffold_213-1510915933:1117352..1117429Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1575043694:1117352..1117429TCONS_00052287-exon-scaffold_213-1575043694:1117352..1117429Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1491911889:1121662..1122777TCONS_00052287-exon-scaffold_213-1491911889:1121662..1122777Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1510915933:1121662..1122777TCONS_00052287-exon-scaffold_213-1510915933:1121662..1122777Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1575043694:1121662..1122777TCONS_00052287-exon-scaffold_213-1575043694:1121662..1122777Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1491911889:1123161..1123984TCONS_00052287-exon-scaffold_213-1491911889:1123161..1123984Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1510915933:1123161..1123984TCONS_00052287-exon-scaffold_213-1510915933:1123161..1123984Clytia hemisphaericaexon
TCONS_00052287-exon-scaffold_213-1575043694:1123161..1123984TCONS_00052287-exon-scaffold_213-1575043694:1123161..1123984Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:1106510..1123984 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052287 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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