TCONS_00052345 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052345
Unique NameTCONS_00052345
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1665

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052345 ID=TCONS_00052345|Name=TCONS_00052345|organism=Clytia hemisphaerica|type=transcript|length=1665bp
GTTGGCGAAAGCTCTATTAATCGTTCAAATAGGAAGGGCGTTGTCCTACA
ACGTACCGCCCTTCGGGCACACTGCAGCTGAAGGTACACAACATGGTCGA
GAGAAAGACGATCCACTTTACTACCATACAAACTCCGATATCCCTCATCT
CCCCTTTGTGACGGGTTTCCTCGGCACACATGGCACCTACCGATTTCTGA
ACATCGCTGAGCAGGTCGCTACCATGATAGGAGATGgGAAACATGGCTTG
TGGCGAGTGCAACACAATGGTTTCATCCGCGAATACCGAAAGAAGGGGGC
AACCGGCCTACCACCCGGGATCGAAGCAAACTCTCAAACTACTTTGCAAG
ATAACGGATACCAACAAGCTGTTTTACATAGTTATTCACATCATCTTCCG
GACGAAGGTTTTTCCGGATACAAGTTTCCGGACCAAGCCGTTTCCGATGG
CTCTGATGGAATCGAAGGTCACCAGAATTGGATCGATTTAAGTATTTATC
ATGAGAAGTATGGTGGAAAGTATAATAATCATGTTCCCATCGATTTGCCA
CAATATTACTGTACACTTTCACAGGATAATTATCCTCACATTAAAAATGC
ATGGCAATATTTGAGAGCTCAACCAAACGCTAACAAGATCGGACCATTAG
GAATTCGAGCAGGTCTTGACATTAAAGAATTCACTATGAACGCTGTAAGG
GTCCACTTATTTGAAGATGCTGGAATCTGGGTCAATGTTGGCGTTGGTGA
CAGTAATTTAGATAGTAAACTGAAGGACTTGAAAGACTTTCGAGATAAAG
TGCAACACGTTAATTACCAGGCTATCGACTTATCACAAGTTCAATACGAA
ATCTACTACATTGAGCGATTATTCTACAACATGCCTTACCTCTTTGTTTC
GCTGGTGATTGACAACAAACCAGGAGAGCCATCTCATTTCTCTTTCGTTC
GTCCACATGGTGTATACTTTGAAGAGCTCAAGAAACATCGTGATGTTTCA
ACACTTAACACTAACGAACATTACGACCCTCAAGTACCGATCAAAGATTA
CCCTTTTAAAGGGAATACAActatgcagaaaaaaatcggtgttCCAGTAT
ACGGTGTCCATAATCCTCATCGTAGAGCATTTAACATGAGCGGTGGAGCG
TGTCCGGAGAAGGGTGGCGACTTTGGTAGGTACCCATGGGGCAACCCTGG
TAGTGGCTGGCCCAATACTTATGAAGAAGTGACTCCGATTTGTGACGCTG
TCATGATAGATGTCAAGTTCTGGGCGAACCTTGATCAACCCTGGGATACT
CTGGACGTTTTCCTTGGTAATGCTGGGTTCAAAGATCAAAGACAGGCTGA
CATTATCATGGATGCAAACCTGTACGGAAAATTCGAAGACCCTTATCTTG
AAGGACGAACCAACCCTCACATGGTTGATATGACAATAAACGGACAAACT
GTTGGACACGAGGAAAACACACGGAAGCCAAATCCCGTCAGGTTCACACT
TGACTACACACGATTGGGAAGTTATCTGAATTTCAACAATGTTTCAGCGC
TTCACAACAATCTGATTAACATTGAGCAGCCTTTGGATgatcagaaaaat
caaaatatctgcCCTGTTcaaccaaacaacaaagaagAATGCCGTGACGA
ACAATTGATGGTGGC
Run BLAST on NCBI

transcript from alignment at scaffold_213:472029..494878-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052345 ID=TCONS_00052345|Name=TCONS_00052345|organism=Clytia hemisphaerica|type=transcript|length=22850bp|location=Sequence derived from alignment at scaffold_213:472029..494878- (Clytia hemisphaerica)
GTTGGCGAAAGCTCTATTAATCGTTCAAATAGGAAGGGCGTTGTCCTACA
ACGTACCGCCCTTCGGGCACACTGCAGCTGAAGGTTTGTAATTTGCCTCT
TATTACAGTTTTATTTTATACCTATATTTGATTTAAAGAATTTTATACAC
AAGTTTGGTTCCTTACGTTGAAAATTTTTTTAAATTTTACATCTTGGTTA
CAGCTTACATTATGAGCTGATTAGTGAGACAGTAGTTTAACTATTTTAGT
ACAAATACAGCATTTATTTTTTAAAGAAAGCATGCTCCTATAAGAAAAAG
TCAACAATCAAATTTTAATTTTTTACATTTTTGGAGATAAAAACAGATAC
TAGATACTAGATAGGACGCCTAAATATTACGACAGCTATCCTTCTTTTCT
TTCAATGTTTCAACCGGTATCCTCGTGTTTCTACTGCAGGTACACAACAT
GGTCGAGAGAAAGACGATCCACTTTACTACCATACAAACTCCGATATCCC
TCATCTCCCCTTTGTGACGGGTTTCCTCGGCACACATGGCACCTACCGAT
TTCTGAACATCGCTGAGCAGGTCGCTACCATGATAGGAGATGGTAAGTTT
TTATAAACACAAAATTTTATATACATATTTGTGGATTTCAAATGTGCCTT
CACACCCATCTAAAAAAAATACCAATCTGGAAGTTTTCTTCGGATGGGGT
CAAAAGTAGGGTGGCATTTTTCACGGCACTCCTAGATTCGGACCTAAACC
CTACATATCTCACCAACACAAGAAAAAAGTGCGTGTCCCATCGTTTCTTT
TATTGTTTTATGGGACAAGAAAAGAAAAGTGAGGGAAATACCCAAATGAC
ACGCTAATTTTGTCCCCGGGACAATGGAGCAAAATTGATTCGAATCAATT
TTGCTCCATTGTCCCGGGGACAAAAGTGAGACACACAAATGTTTTTGAAA
ATGTTGTCGATTTCACTTATATTGTTAAAAAGAAAAATGAGGTGTAGACA
CGAGAAAGCCTTTCAGGTTGGTGGGATGGAGCATGTTGCATTGTACCAAC
GTGAAAATAAAACTTCTCGTGTCCCCTAGCCGTAAAGGGTAACCCTTATA
GACCGTGATAAAGTCCCATATGAAATCTAATCACGCTTCTCACAAAATTG
TAATACCTCATCGGCCCTTTCTACACCGGCCATTTTTAGCATTATTTTCA
CTGACGTCATTTATAAGGACTGGCGTAAGGGATCGGAATTAAATATAGGA
CCGGGTTAAAAATGGAAACAAATTTAGCTTTGGCGTAATAAAGGTCGGTG
CAAAATTAGGGCCGGTGTAAAATTAGGGCCGATAAGATAATGCCTTTCTT
AATTTTCATTCATCAGGGAAACATGGCTTGTGGCGAGTGCAACACAATGG
TTTCATCCGCGAATACCGAAAGAAGGGGGCAACCGGCCTACCACCCGGGA
TCGAAGCAAACTCTCAAACTACTTTGCAAGATAACGGATACCAACAAGCT
GTTTTACATAGTTATTCACATCATCTTCCGGACGAAGGTTTTTCCGGATA
CAAGTTTCCGGACCAAGCCGTTTCCGATGGCTCTGATGGAATCGAAGGTC
ACCAGAATTGGATCGATTTAAGTATTTATCATGAGAAGTATGGTGGAAAG
TATAATAATCATGTTCCCATCGATTTGCCACAATATTACTGTACACTTTC
ACAGGATAATTATCCTCACATTAAAAATGCATGGCAATATTTGAGAGCTC
AACCAAACGCTAACAAGATCGGACCATTAGGAATTCGAGCAGGTCTTGAC
ATTAAAGAATTCACTATGAACGCTGTAAGGGTCCACTTATTTGAAGATGC
TGGAATCTGGGTCAATGTTGGCGTTGGTGACAGTAATTTAGATAGTAAAC
TGAAGGACTTGAAAGACTTTCGAGATAAAGTGCAACACGTTAATTACCAG
GCTATCGACTTATCACAAGTTCAATACGAAATCTACTACATTGAGCGATT
ATTCTACAACATGCCTTACCTCTTTGTTTCGCTGGTGATTGACAACAAAC
CAGGAGAGCCATCTCATTTCTCTTTCGTTCGTCCACATGGTGTATACTTT
GAAGAGCTCAAGAAACATCGTGATGTTTCAACACTTAACACTAACGAACA
TTACGACCCTCAAGTACCGATCAAAGATTACCCTTTTAAAGGGAATACAA
CTATGCAGAAAAAAATCGGTGTTCCAGTATACGGTGTCCATAATCCTCAT
CGTAGAGCATTTAACATGAGCGGTGGAGCGTGTCCGGAGAAGGGTGGCGA
CTTTGGTAGGTACCCATGGGGCAACCCTGGTAGTGGCTGGCCCAATACTT
ATGAAGAAGTGACTCCGATTTGTGACGCTGTCATGATAGATGTCAAGTTC
TGGGCGAACCTTGATCAACCCTGGGATACTCTGGACGTTTTCCTTGGTAA
TGCTGGGTTCAAAGATCAAAGACAGGTAAGGTTTTTTTCTGTTGTTAACT
ATACCTAGTTACCGAGTTTTCCGTTATAATATAAGGAATGCTTTGAAACT
TTTTAAGATATCTGAAGGCTTCAAAATTTTTGAATGTTCTTATAAAAAAC
GTGTAAAGTGCCTTCATAGTGTTTCAGAAATGGGTACAGAAAACCTTGTT
TCATACACAAAGTTCAGCATTGAGAACAAAATAATAATTTTTCAATAAAG
GCTGACATTATCATGGATGCAAACCTGTACGGAAAATTCGAAGACCCTTA
TCTTGAAGGACGAACCAACCCTCACATGGTTGATATGACAATAAACGGAC
AAACTGTTGGACACGAGGAAAACACACGGAAGCCAAATCCCGTCAGGTTC
ACACTTGACTACACACGATTGGGAAGTTATCTGAATTTCAACAATGTTTC
AGCGCTTCACAACAATCTGATTAACATTGAGCAGCCTTTGGATGATCAGA
AAAATCAAAATATCTGCCCTGTTCAACCAAACAACAAAGAAGGTAATTGT
CTTCCAGTCTCTTCATAGTTTATACAATATACAGCTCCAGGCTTTTATGC
CTTACTCTTGGTCCACTGTATAAGCACTGCTATAGGCGGCCTAGTGCCTC
CCCCCACGGGGATTTTCTTTTTAATAGGATTAAACATAATAAAAGTTTTT
AACAAAAGAAGTTTATCAATAGAGATGAATGAAAGAATGTTTAAAACAAA
GCTGATTGGGTTATGTTTGGAAAATCTCTATTGTTTCATTAAAACTTCAG
TGTGCATGCGATGTATCCAGAAAAATTCAATATTCAAAATAATAGCGCAC
TAATCCCTTCTTTGATATATGAAAAGTTTTTTTAGATTGTTGGGTTTTAT
TTCAAAATCTAATGAGCCTTGTAAGTTGTAATCAAGACTGAATTAATTTT
AAACCATAAATAAACCATGTCCGAAAACACCAGAAAACTTCATCGAAATA
GTATACTAAGCAATCTAAATCATTGATTGAACGATGTGTTTTTCCAGAAT
GCCGTGACGAACAATTGATGGTGGCGATTTTAGTGCTGGTGGGTGTTATC
TGTATCATTAACATGTGCGCATTGTTTTGCTGTTGCGCATGGCAACGAAG
CAAGTCGTCATCGAAACATGATGGAAATAACGAAAGCCGAGCATGTGGAG
TCGACAACCGAGTGGGTAGAGTCGACCTCGGTGTCGACAACCGAGCGGGC
GGGTTTGACCATGGAGTCAACAACCGAGCGGGCGGGTTCGACCACGGAGT
CGACAACCGAGCGGGTGGAGTCCACCTCGGNNNNNNNNNNNNNNNNNNNN
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TAGTGCCGACATTAGGGTACCAATTTTCAAAAAGCTCCGATCAAAGATTT
TGCTTGGCTGGGATTGAGAAGCTTTGTCCAGGGTATATAAAGGTCAGTGA
TTTCAATACTGGAACCTTTTGTTTAGTCTAGCATTTATAGTATATGTTAA
TTAATCAATCAATCAATTTTCAATTTATGTCAGTAAAAAATTGCAGACTC
AGTCGATTTTATACATGTTTTTGTTTGATGTACGGGGCCCCCCCAGTGGT
TTGCGTGAATGCGTGAATGGGCTTTTTTGCTTGCGTGAATGCGTGAAAAT
TGAAAAAAAATTGCGTGAATGCGTGAATTAAAAAAACTTGCGTGAACGTG
AAAATCCATTTTCTATTGCGTGNTGCGTGAATGCGTGAATTAAAAAAACT
TGCGTGAACGTGAAAATCCATTTTCTATTGCGTGAATGCGTGAATCTGCC
CTGTTTTTTACGTGAACTCGGGGAATTTTCCTTTTCACACAGTTTGCAGA
ACGTGGTACGTTTGTTCGAGATTTTGAGTGCAGCACTCGCCAAAAGTCGA
GTGCAAGTATAGTTTAGTCAGGCCTCACCACAAATTTTTAATTCAAAGAA
ATATTTAATACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATA
CCCATGATGCAGACTTTTGAGAACCTCATTTCTTGGCAAAATCAGTCTGA
AATGGAGTCGTATTTAAGCACATCAGAGTGTGAAAATAGAAATTTTCCAC
TGTCGGTGCAAACCATGGTTGCGCCTCCCTTAGTCACTATGTTTACGGCC
CCTCCACGTTAGGAAATCAAGACGCGAGCCCTAATTAAAATTTTTGTTTG
CTCGCTTCGCTCGCAACAAATGTTCGTCCTTTTACTTCATTTTGCAAACT
ATCAAGCGATCGTACCTCGCCTCTTAACGAATTTAGACTACATTCTTTTT
CAACGGTGTTAAAGATAGCATTTTTAGCCAAACGCGAGGTGACAGAAATG
CAAAAAATTTCCTCTCTGCGAAAACCATGATGGTTGCACCTCCTTACCCC
TTAGCTAAGCATCATGGTGTCACCCTGGAGTTTGTTTGACCTATTTTTTA
TAATGATTAAGATATTTTTTGTACAAAAATTCGCCTGCGGCGCATATCTT
TTCACTTACTATCGCGATACCTTAACTGGAGAAGTTTCACCTTTTCTAAA
CGACAGTGACATGTTAGAAGAATCAAATATTTTGCGTGATGGCATATGAT
TTAAAGTTAAAAACTTACGTAGCGCTTTAAGCTAATGTGCATATAATCAG
GTGTGTAAAGGAAAAAATCACTACTGAGTTAAGTTTTTCTCAAGTGCATG
ACCAGATCCGGTCGAAAAATATCTCGAGTGTAGCAGCCTTGCCATTTTGG
TTCCACTGGGGGGCCTCGTATACGAGGGCATTCCNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGGATCGAAAATTTGGG
GGAAAATGCACTCTAAGGGTATGATTTTCACTGATTTTTGCTGCACTGTA
AGGGTGCAATTTTAAAAGCCAATTTTTGGCCTGCACTACTGTCAGTCCGC
AAACCCATTGCCCCCCGGGCATCGTATCGATACAAAAGTGACAAGAGGAA
GATTGGTGAACGCTTTTCCTGAAATAAGTAATAGCTATCACACTGTACCG
AGTACAATATGGGATATAATTTTTTTGAGTTCATATTTTTCTTCATGAAC
GAGAAAAATATATCCCACACGGGATCCCACATTGTTCGAGTAAAAGTTTG
CTAACTGGTTTATCGTCAATTTATCATAAAATATCAAGAAACTTTTCTCT
CTCCATTTGTATCTTTCTCTATGTTTTGTTTCATCTAAACATTTTGAACC
AGTCAGATTTTGCTCATATTTTTCATGTTGACGAAAAAACAACAACACAT
CTCATCTAAGATTTTTTTCCACCCTCCATATTTGAGTTTCGTAAGTCCGC
GTTCGTTCTTATTTCAAGAGTAATTTACCTATAATTTGAGTAAATTTTGG
CGAAAAAATTACCCTAAGTCCTAACGGCGCATGCCTTGACGTCATCAATC
AGATATTTCAAAATTCTGCTTCATAAAACGTCATTCTCACTTGAAGTTGC
CCCCGGAATATAAGGTACTGAAAAGTATGGATATTTATCAAATAGAAAAG
CAAAGTCGTTTTTTAATTCTCAAATTTCTTAAATTATATATTATATTTAT
CATAGTCTAATTCTTTAAAAAATAAAGTTATCATTAAAAAAATTTAAGAA
ATTAAAGCTAAAAACTAAATCTTGAAATACACGAATTAATACTACCATCT
CCGATTCAGTTGGGACCGCGCAACGCGTTATGCAGACTGTTTGAAGTTTG
AAAAATTCTCCGGTACTTTTTAAAGTGGTTAAATCAAAGCTTGTTAAAAT
CGATTTACATCTGGAATGAAAAATTATCCCATCTTAAGAGTGGGCAGACC
CTGGAGTGGTAGGGCAAATACTGTATTGAATCTAAAAACAAAAATTAAAA
TCAATCAAAATAAAAATATAAGAAAAAATAAGTTCTATTCACAAAGTAAC
AAAAAAAATCAAACAAAACTGCAGAAAAAAAATCTTTAAAAGAGTCAATA
TTGTAGAAAAATTAAAAATAGGTCCCACCCTCCCAAATTAAAATATTTTC
TCCTATCATTAATTGGCTTCAACCTTAAAAACTTGTAAAAAATCTTGTCA
ATCAAAATGACATTTTGAACTATAAAATACCTATGCTGCTTGGCATTCCA
TTTCAATTTTGCAGATTCCATTAAATTTCTATAATAAAATTTCCTAAATG
AGATTTCATATAAGAGCATGGGTTGTTTTTTTTTATTTGGCGCACCTTCA
AAGATAGCAATAAATCGTCAATTGCATCCTTTAGAGAGCAATTAATCGTT
AATCGCACTCTCGAAGAAGCACCAATTTCTTCAAAATTGAATGTTTCACA
TCGTTCTTTCATCGAACGTGTTGATTTAATTCAAATGTTATTTTGAGAGA
AAAAAAACACAATAAAAATAGAAAAAGAAAAACATACAGAGATGAGAGAA
AAATAAAGCTTTCAGTGTAATTCCCTTTCATTGTTTTCATGAGGCAGAAA
AAAAGTTCTGAAAATCATTGTGCGATTAGCTCGTAATCACATGATTACAC
TCGTGATTTTTTGTCTCGAATTTAAAAATTAAAAACAGAAATTAACTGGT
GCAACTATTTCCAAATTGCACTCCTTGTCATGTGATTACATATACTAAGC
ATATAATAGATAAGCATAACCATTAAAAAAGCTGGAAATTCCAAATCAGT
CATATGCCATAAAAATTGAATTTAAATTTGACTTTACAATCACGTCTTCA
AATGTGCCCAAACCAAAAAAGTGTTTTCTTTACCCACAATACTTTTCTTC
CGGTCAATGATCCGTATACCGGCGTCAAGACATTTACGTCCGCACGTCAA
CACAAGACGTTTACGGGATTCGTCCGGATTACGACTGGTGATCATACGTA
AAGGAATAATAGCATCAACAAATTCGTCGTAACAGCGTACGGATAGACGG
GGGACCATGTGCCCCATTGCGTCACATACGAGTAGACAACCAGCCGTGGT
ACCAACGTATAATTGCTTTTCTACCACGACCAAAGATACGATTTGTGCAT
CCGGAGCTGAAGAAAATACGTTAGTGGGAAGTTTATTTCAAAGCGTCAAT
CAGTAAGGTAATAAATTAGCCTGGAAAAAAATTGAAATCATCCAAAGAAA
GGGGAAGAGGCTGACAGTAAAGAGATTCTTTCTAATAGATGTCTTTAACT
TTAGAAGAAGCGCTCAAATTAAAATTTCACTTCAAAAAAGAAGGCTCTTT
GTTTGAACTGCTATGGTATGCGAGATTGCCAAGGTTGAAATAATTTTGCC
CAGGAAGCTTTTTGAAAGCATAATCATGTCATCATGCGAACCACTTGGGA
AGGGGACTCGTTAGATCTGAAATAAAAAATTTACCCCTCATCGACTTTGA
CTTCTTTGAGGGTTTAGCAGAATTCACTGAAAATGAAAGAAATATATATA
TTTTAATTCATCTCTGTCCTTCTTCGCGTAAATAAATTGCACTCTGATAC
AAATCCTACAACAGCCGAAAGACCTTAACTACAGAATCAGTGAAACAACA
TACACGCTTTTTTTTTATAAGAATGGTGTAATTCCATTTCATCATGGATA
TTCTTAACTTTTATGGGAAAATCATCCTAAAATATTCTTACAACATTCTT
AGGTTATGATCCTAATTGACAATTTATAATTTAAAATGGTCTAAAAATGG
CATTCTTAGCTTGACTAGCAAAATTCTATGATGGTGATATTCTTAGAATA
TTCTTAATTTTTTGGCCATTTTCATCATAGACATTCTTATAAAGTGTATT
CTTATAAAAAAAAAAGCGTGTATTTCCCTTCGTTTTATTGCCACGGAAGG
AATGACTCTTTCGTGAAATTTTCTTGTCTAATTATCGGACAGCTTTGGAT
AATTTTGAATCATTCACCATTTAATCCCTAAGATTTTAGAATCATTCCTT
CAGTGATAACAAAACAAGGGGAATATGGTGACTGGGAAAATAATCTGATT
TAACGTTGACAAAAAAAGGAGAAAGGTAAACTTACAGTCATGCCAAGGAG
AATGTTGGCTGACATCCATCGATTCTTCCAAAACTCTTTTGTCGACATTC
CAACGAGATATTTTAGTTCCCGGGTACGCCACCACCCACACATGAGCAGA
TTCCATTACTTGGGCGGGCGAGGGTGTCTTCAAGCTACCGCCCTGATTAT
TATTGATGGCTGAATCATAAGAACGAGATGTCTCGATTAAAATGACATTA
TAGACCTCATTAAAATCATTATCTTGATTTGTCCCGGTTACCGGCAGAGT
TTGCATTTCACGGAGTGTCTTCATTTCCAGAATTGATATCCGTCCTTTAT
CTTGACCACACCAAAGCTCAAGCGTAGGTTCCCGAGCTTCTGGTGAAGGA
CTCCTTGACTTCCCCTGCCTTGGCGAGCTATTGTCTCGCTTTGTGACAGC
GATGTCTCCGCCACCATCCGCTTCTTGGCTATAACGGCGCAAAGCGAAAC
TTGTTACTCCAGCCATACAATGAATTTTCAATTGGCTTGTGAAATGTTGT
TTTTCTTCCAGTTTCCGTATGACAGTGGTCCGGTCTGCTTTATGAAAAAT
TTCCACTGCATCGTTCTGAGGGATTGTATTGTTATATTTGGAAATGTTAT
CATCGAAAGCATGTAGACTGCCATCTGAGAGTGAAACAAAAACAGTACCA
CAAACAGGAGAATGAAGAATCTTGAGTATGACTCGAAGGTTGAAGAAACC
GAAAGCAACCGGTTTATAAGTGAGCGCACAAAACACTTGGATATGTCCCG
CTTCAGTGCCAATCCATACGAAACTACCAACCGAACAGATTTGTACAACA
CGCTCACGAATCTTGATATTCTGAAAAATGAATGAAGAAAAACAGTCTGA
GTTCTTTGAATATCATGTAACCTACAAATTAGTTTCTGTTGTTAATTGCC
TCGTGATGCCGAGTGGTAATATCAGTCCTATCTCGGCAAAGAATTTTTTT
CTGTCATTTCAAGTTTGACAAAAGATCTTAACGGACTTGGAAATTTAATA
GGCTAATTTTCAGAGACATTCTCATTAATTCATGGTTTAACCCAATGAGG
TAGAGCTGAAGGCTAGAGTCGAATCACCTGTGCAGGATTTGAGGCTAAAT
ATTTCTTACACAATATGCGCATCCCACGTGGTTGCTGGATTGGAAGTAAC
ATTTACCTACCATTTTACTACCTTAATTCGAAAATGTAAAGCGCGAAAAC
AAAGAATTAATTCCTAATTCCTAATTGGAACCTCAATAATTCGGATCCTT
CTGCAATTTAATTTAAAGCATTGGTCCCCTGAGCTAAGAACCTGAGGATC
TAGAGCTTAGAAAAAAAGTTGGTGTCAAAAAGAAAAGTTGGTAATAAAAT
TTGGTAATTTGTCGCGCCATATGAAAGAGCTGATTCATAATTCTAAGAAA
AGTTCTTTCGTTAAACTATTTAAAAGATATAGCTCTCATCAAAAGAATGC
CATTCCATTATCAAAATTCCTTATCTTGAGAAAATAAATATCGCTCGATT
TAGCAAATTTTAATACCACTAATTAGTTCTACTTAATCTTCTTATCTCTC
TTAGCATGGAGGTATAAAGAAAGACAGGAGAAGTATGCTATTGTAACCAA
GCTCGCCCTACGATTAAAAAAGTTACGATGTATGCATGCTCATAATCTCA
TATATCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCAAAAGACTTTAACGACCAATTACCGACACATTCAACTCCTGTTTTCTT
TATACCTCTATGCTCTTAGCATTTCGAATCGACCTTCCAGCGCAAGTTTT
TTTTTTCTTTTGCTTAGCTCTAGTTTAGGGCAAAAAGTGGGCCGTCTAAA
CTAGAGCTTACTAGACAAGATTAGAAGATCCAATTAGTGATCAGATTTTT
TAATCTTTCTTAGATCAAAAGATACAGATATTTAGTCAAGGTTTGAAGCT
AATAGCATAGTTTTGACTTTAAAAAGATGTTGCAAACAAACTCGGTCAAT
AAGGTAAGATAAGGTTGCTAAGATTTTAATCACAGCACAAATGTGGGCTA
TTTTAATATGAAGCGTGTTTATGAAGACAATGTTATCAAAAAAAGGTATG
GAAAAGATTCTTTAAGCAGGAAAAATAAACAAATAAAGCAGGAAAATGGC
GAATCTAGTGCAAAAGAACTGATTTCACGACCTATGTGTTCATTGCAGAG
AAAACAAATGGCCTGAAACGACCGAAAGTTAAGGGGATCGAATTTTTTAC
TGGCAGAAATTCTGGTTAATGATACCGTTCTTTCATTTTAGAAGATGTTG
GCGAAAGCTCTATTAATCGTTCAAATAGGAAGAGCGTTGTCCTACAACAT
ACCGCCCTTCGGGCATACTGGAGCAAAAGGTTTGTACGTTGCCTCTTATC
AAAGTTTCATTCTACACCTGTACTTGATTTTAAAATTTTTTTACAAAATT
TCGGTTCCTTTGGGATTAACGTTGACTAATGTTTTATATTTTACAGCTTG
GTTGGTTTTACAGGTTTTGCAGCTTACATTAGTTTTAGCCATTTTAGTAC
AAATACAGCTTTGTATTTTTGAAAGACAGCATGCTCCTATTAGAGGGAGT
CAACAATTAAATTTTGATATTCTACATTTTCGGAGATGAATTTCAACGGA
AAAATTGATACTGTACTAAATACTAGATATGACTCCTAAATATTACGACA
GCTATTCTTCTTTTTTTTCAATGTTCCCACCCTTATCCTCGTGTTTCTAC
TGCAGGTACACAACATGGTCGAGAGAGAGACGATCCACTTTACTACCATA
CCAACTCCGATATGCCTCATCTCCCCTTTGTGACGGGTTTCGTCGGCACA
CATGGCACCTACCGATTTCTGAACATCGTTAAGCAGGTCGCTACCATGAT
AGGAGAAGGTAACTTTTCATAAACACAACATTTTCAAATATTTTTGAATT
TCAAATGTGCCTACACACCCAACCTTAAAAAATGCCAAACTGGGAGTTTT
ATACAGACGCAGTCAAAAAGTAGGGTGGCATTTTTCACAGCGCTCCTAGA
GTCAGACCTAAACCTACATGTAGATGATCGAAAAAAGGTGGGCGATCTCC
TATTGGCAATTAATGGGTTAGACATTGTTTTTAACAGTTTGGAGGACATA
CGTTGCAAGTTAAAAAAGGGCAAAAACAAAAACATTAATCTAAATGTCCT
ATTTTAGTAAGCTCATCCACCCATGTATTTTAATACGTGTCGCCTTGTTG
TATATAGGGGTACGCTTTAAAGTGAGTTGTTCTTTTCAAATTTAAGAGTT
TAAGGGCAGCCCTCCTCAAAAGACGGTTCTAATTAGATAACACTGTACTG
TGTAAAGGGAAACCCTTATAGACCGTGATAAAATCCCATATGAAACCTTA
TCGCATTCTTACAAAATTGTAATACCTTACCAGCCCTTTTACACCGGCCA
TTATTAGCGTTATTTTCTATCGCTGACGTCATATATAAGGACTGGCGTAA
GGAATTAAATAGAGGGCCGGGTTAAAAATGGAAACAAATTTAGCTTTGGC
GTAATAAAGGTCGGTGCAAAATTAGGGCCGATGTAAAAAAGGGCCGATAC
GATAATGACTTTCTCAATTTTTATTCATCAGGGAAACATGGCTTGTGGCG
AGTGCACCATAATGGTTTCATCCGGGAATACCGTAAGAAGGGGGCGACCG
GTCTACCACCTGGGATCGACGCAAACTCTCAAACTACTTTGCAAGATAAC
GGATACCAACAAGCTGTTTTACATAGTTATTCACATCATCTTCCGGACGA
GGGTTCTTCCGGATACAAGTTTCCGGACCAAGCCGTTTCCGATGGCTCTG
ATGGAATCGAAGGTCACCAGAATTGGATCGATTTAAGTATTTATCATGAG
AAGTATGGTGGAAAGTATAATAATCATGTTCCCATCGATTTGCCACAATA
TTACTGTACACTTTCACAGGATAATTATCCTCACATTAAANCTTGCCACA
ATATTACTGTACATTTTCACAGGATAATTACCCTCACATGAAGAATGCAT
GGCAATATTTGAGAGCTCAACCAAACGCTAACAAGATCGGACCATTAGGA
ATAAGAGCAGGTCTTGACGTTAAAGAATTTACTTTAAACGCTGTCAGACT
CCACTTATTTGAAGATGCTAGAGTCTGGGTCAACGTTGGCGTTGGTGACA
GTAATTTAGATGCTAAACTGAAGGATTTGACAGACTTTCGAGATAAAGTG
CAACACGTTAATTACCAGGCTATTGACTTGTCAAAAGTTCAATACGAAAT
CTACTACATTGAGCGATTATTCTACAACATGCCGCGCATCTTTGTTGTGC
TGGTGATCGACAACAAACCAGGAGAGCCTTCTCATTTCTCTTTCGTTCGT
CCAGATGGTGTATACTTTGAGGAGCTCAAGAAACATCGTGATGTTTCAAC
ACTTAACACTAACGAACATTACGACCCTCAAGTACCGATCAAAGATTATC
CTATTAAAGGGAATACAACTATGCAGAAAANACACTAACGAACATTACGA
CCCTCAAGTACCGATCAAAGATTATCCTATTGAAGGGAATACAACTATGC
AGAAAACAATCGGTGTCTCAGCATACGGTGTCCATAGTCCCCATCGTAGA
GCATTTAACATGAGCGGTGGAGGGTGTCCAGAGAAAGGTGGCGACTTTGG
TAGGTACCCATGGGGCAACCCTGGTAGTGGCTGGCCCACTACTTATGAAG
AAGTGACTCCGACCTGTGATGCTTTCATGATCGATGTCAAGTTCTGGGCA
AACCTTGATCAACCCTGGGATACTCTGGACGTTTTCCTTGGTAATGGTGG
TTTCAAAGGTCAAAAACAGGTAAAGTTGTTAAATACGCCTAGTTACCGAG
CAAAACACATTTACAAACGAAGTTTTTTCATATACACCATTCTTTCCATA
AAGTACAAACTATACAAGAACATAAAAGGCTTCGATTGCAAAAAAACATT
ATAGCGTGTTCTATTCGTTTTATCTCCTAATAGTGTTTTATAACTCTACA
AATGGATACAAAATACCTGGTTCTATACAAAAAGTTCAGCATTGAGAACA
AAATAATACTTTTTTAACATAGGTTGACATTATCTTGGATGCAAACCTGT
ACGGAAAATTCGAAGACCCTTATCTCAAAGGACGAACTAACCCTCACATG
GTTGATATGACAACAAACGGACAAAATATCGGATATGAGAAAAATACACG
GAAGCCGAACCCCGTCACGTTTACACTTGACTACACACGATTGGGAAGTT
ATCTGAAGTTCAACAATGTTTCAGCGCTTCACAACAATTTGATCAACATT
GAACAGCCTTTGGATGATCAGAAAGAGCCAATAATCTGTCATGTTCAAGA
AAACAGCAATAAAGGTAATTGTCTTTCAATCCCTTTCAGGAAACTCTCTA
CCGGGTACGCCACAAAAAAATTTCTCTCTTTGAAACTGATTTCTCAAAAT
CTAAGAATTAAAAAACAACCATTCCTATTCCATCGGAAAGAAGAAAGATT
AACTTAAATTTTTATGGGTCATTTATTAAATTCGATACATTCGATCAAAA
GTTATGCTTAATCGATAAAAAAAGTTACTTTGAGAAAGTGCCCGAAAACG
TTAAAAATCGACCTATCAAATTTTATTTTGAAATTGACAATCGCAAGAGA
CTTTACATGATTAAGGCCATTTTTTCAGTAATTAAACACATAAATTTTGA
GACTGATGCAACGAAAGGGTTTAAAATGTTCATCAAAATCATTTCACTTT
ACTTTTAACAAAATCTTTCTCCAGATTTTTGGTTCTAGACTGGAAAAAGT
CTATGTAAGGCGGAATGTACCTCGAAACCCATATTTGATGTATTTTTATG
AATTTTACCAGATTTTTTGGCTTTTTTCGACGAATTTTCTGCCTCTTATT
GAAATTCAATCTTCCTTTATATAACAAACGGTCATTTGACAGCTAATTAT
CATTAGCTATTTTTAGCTCATTATTATTCTTCTGTTTAATTTGATAGGTC
GATTTTTAAATGGCTCTTTTAAGATTTTTAGATTTCGGAAAAAATACTTT
TAAAGAGAGAAACTTTTTCGTGGCGCACCCGGTATTGTTTCACTAAAACT
TCAGTGCGCATGCAATGTATCCGGAAAAATTCAATATTCAAAACAAGAGC
AGTGCGCATATCCCGAAGAGAAGGAGTTTTACGCTCGAAACAAAAGAAGA
TATGACGGAGCTTAGTCCCTTTGATATAAGAAAAGTTTTTTGAATTTGTT
AAGACTATTGACTTTTCTTTTCAAGCTTTAATGAACCTTGTAAGTTGTAA
TCAAGACTGAAGGAATTTTACGTGTAAACTTTTCGTGATTTTGTTCTCCT
TCCATTTCTACTTCAACTTTCAAATCAAAATAAGATTAGATAAACCATAT
GTCCAAAAACACCAAATACGAAATAGTATACTAAACAATTTAAACCATTG
ACTGAACGATGTGTTTTTCCAGAATGCCGTGACGAACAATTGATGGTGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033096XLOC_033096Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052345-exon-scaffold_213-1575043694:494796..494878TCONS_00052345-exon-scaffold_213-1575043694:494796..494878Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1575043694:494287..494439TCONS_00052345-exon-scaffold_213-1575043694:494287..494439Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1575043694:492404..493512TCONS_00052345-exon-scaffold_213-1575043694:492404..493512Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1575043694:491887..492178TCONS_00052345-exon-scaffold_213-1575043694:491887..492178Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1575043694:472029..472056TCONS_00052345-exon-scaffold_213-1575043694:472029..472056Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1510915933:494796..494878TCONS_00052345-exon-scaffold_213-1510915933:494796..494878Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1510915933:494287..494439TCONS_00052345-exon-scaffold_213-1510915933:494287..494439Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1510915933:492404..493512TCONS_00052345-exon-scaffold_213-1510915933:492404..493512Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1510915933:491887..492178TCONS_00052345-exon-scaffold_213-1510915933:491887..492178Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1510915933:472029..472056TCONS_00052345-exon-scaffold_213-1510915933:472029..472056Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1491911889:494796..494878TCONS_00052345-exon-scaffold_213-1491911889:494796..494878Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1491911889:494287..494439TCONS_00052345-exon-scaffold_213-1491911889:494287..494439Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1491911889:492404..493512TCONS_00052345-exon-scaffold_213-1491911889:492404..493512Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1491911889:491887..492178TCONS_00052345-exon-scaffold_213-1491911889:491887..492178Clytia hemisphaericaexon
TCONS_00052345-exon-scaffold_213-1491911889:472029..472056TCONS_00052345-exon-scaffold_213-1491911889:472029..472056Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_213supercontigscaffold_213:472029..494878 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0827673	0.0269916	1.46177	7.77384e-07	0	0.00858229	0	0	0.329966	0	0.139686	0	0.0691807	4.89996e-06	0	0	0	0.0542096	0	0.103421	1.3368e-05	0	0.156968	0.178669	0.0334114	0.0356576	0.027045	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052345 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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