TCONS_00052470 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052470
Unique NameTCONS_00052470
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052470 ID=TCONS_00052470|Name=TCONS_00052470|organism=Clytia hemisphaerica|type=transcript|length=2294bp
CGAGGTTTCGCAGTTCAGTAGCTCCCAACTTAAAAATAATATGCAACTAT
GTTATAATTTGATAATATCCGATACCAACTTCATCAGTGTACTCTATTAT
TTTCCGCGTAGTTAGTTATAGTATTGTGCTTTTAAGCCCGACTAAATCTA
GAAACCACCGATCCCTCTACCTACCTGCCGAAAACACGAAGAACAGAAGA
AAGTTCTCTTTATATTCAACTACAGAAACTGAAATGGGAAAACCACAGAG
AAAAAAACGAACacacaaaaatatcaaagattTCAAGAAGAAATTTCGGA
CAAGGAAAAGAACAAAAGATATCGACGAAGTTCACGAAGATGTTGAAAAG
AAATCTGATGCACTTTTACATCAAAAAGTGGACTCTGACCTTCCTGGACA
AGGCCAGTTTTACTGTTTATTTTGTGCACGCTACTTTATGGATGAGAAAA
CACTGACAAATCACAAGAAGACTAAGAATCATAAAAAGAGaatGCGGGAA
CTGAAAGATAAACCTTACAGCCAAGCAGAAGCAGAGATGGCAGCAGGTAT
GGGCTCGTTTACAATTCAAGTCACAAAACAAGGAAAGTCTCTCAATAACA
ATGTTTCGAAAGTCAAAAACGCTTCATCAGCAATGGATACTTTCTCGCCG
GCATCCAGTGTAACGAGCACTTCAAACATTATGGAAGGACTTAATATAGG
ATAGCCGCTACTTCTAATTCTTAAATAAACTGGTATCCACCTTGAGCCTG
TGGTCGGAGGTGTTGATCAGGTTGAGTTTGTGGCAATGGAACCCTTCCTT
TTAGAGAAGTACGATATGAATAGTGGCTTGAGATGATTTGGTTTCCTAAT
TAGTTATTAACGGgactgttttttttcttcaacaaACTGTGATGCAGTGT
AAAGTGCAAATATCGACTACAAGTGGGGGAGAAGGTGCCTACTTCGCAAC
ATTAAAAAGaacgaccgaaagtgactgtacgtATATTGCGTAAAATAACG
ACTAACAGTTTATAAatacgcatgcgttttaactttgttttgaaaatgat
gcGAAGTAGACACTTTCTCTATGTGACAAGCaatcatattttttataatt
tgttgataaaagttaaattttatgATATATTAGATTCTTATTTGGACCGT
TTTTGCGCAAAAATATGTGCCATTTTGAAGTTTCCAATAAAATGGTAGCT
GTGTTTCACCTAAATTTCCCTCGTGATCAAAAGAGCACCCATCTTGAGTA
ACGAATTGATCTTTATTAGGTTTTTCTTGGTCATTTTTTATCCACCAGCC
acgttttttgttaaaagcAACTTGATCTATCATGTCTCCGACAGTTGATG
TGGCTGATGCAAATGTCCCACGGAAAACCCACGAATCTGATTCCTTTCCT
ACTGTGACGTCCTTGTAAATGGCTATTAGATCACTCTCAACAAATGGATA
TGGTACAGTGAAGCTGATTAGCAAGTCAGTATTTTGGACTCGATCTGAGA
GTTCATTTAACCCGATCCAGTAATCTGATGTAAAAATTCCATTCACTGAA
GAAAGAGAAAATACTCTTTTTGGATATTTTAGTTGGCCAATGATTTCTCG
ACCAAAACCATTGCAACGAGCGTAGCGATATTTTTCTTCTGTTTGACTTT
TCAACGACATaagataaaaatcattttttttattcttgcaTGATGATACT
ATTGAAAAATCAATCAGCCTTTCTAAATTAATTGCTGATATGAAGGCTGT
ACTGTTTTCCTTTCGAGTAAATNTTGTACCAGATCGTTTAGTAGCAAACC
AATAAAGTGAACAACCGAAATGATAACTATCGAATCTTTGGACTTGAAAA
GACATACAGTTTTTTGTATGGTAACATCTAGTGAGACAATTTTCGATGCT
ATTTTCGTGGAAGTTAGCAAAAGGGTCAATAGGAAGATTTGTGTATCTat
caagaatttcaaaatgaattccaTCCAATCTTTGAAATGACATTTGACTG
CATTGTTCAAGGATAACATTCTGAATAATAAGCGGGAGTACAATTAAAAT
CCGAAACTTCTTTGCTGTCATTGTTTCCTGAAACGACAATAATAACATAC
CTaaactttaaaggctttaaaagaaattttgaattttatattatattctC
TTAAAAgaataataaagttttaaaattttatatattcaaACTTCACGACA
ATTGAtttgatttatattttgtaagttttcttttttctttgtatgCCGTC
CGTTGCATAAATTATACTCAAGAAAGAACAAATGAAAAACGAAT
Run BLAST on NCBI

transcript from alignment at scaffold_214:159619..168565-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052470 ID=TCONS_00052470|Name=TCONS_00052470|organism=Clytia hemisphaerica|type=transcript|length=8947bp|location=Sequence derived from alignment at scaffold_214:159619..168565- (Clytia hemisphaerica)
CGAGGTTTCGCAGTTCAGTAGCTCCCAACTTAAAAATAATATGCAACTAT
GTTATAATTTGATAATATCCGATACCAACTTCATCAGTGTACTCTATTAT
TTTCCGCGTAGTTAGTTATAGTATTGTGCTTTTAAGCCCGACTAAATCTA
GAAACCACCGATCCCTCTACCTACCTGCCGAAAACACGAAGAACAGAAGA
AAGTTCTCTTTATATTCAACTACAGAAACTGAAATGGGAAAACCACAGAG
AAAAAAACGAACACACAAAAATATCAAAGATTTCAAGAAGAAATTTCGGA
CAAGGAAAAGAACAAAAGATATCGACGAAGTTCACGAAGATGTTGAAAAG
AAATCTGATGCACTTTTACATCAAAAAGTGGACTCTGACCTTCCTGGACA
AGGCCAGTTTTACTGTTTATTTTGTGCGTAAGTGGATACTAAGTTTTAAT
TTTTTTACATTTGCAGCCCAAAACATTTTTACTTTTGTTGTCAGTATTTT
GTTTTTTTTCGATTTCAAGAAAGATAGACAACATCTGGGGTTTGTGCAAA
AGAACAAACGTCATAGAAAAAGCTGATACATTCATGAATGTAATAAAGTT
ATTAGATTTTCAATCCTAAACAGGGTACTGATAACTTCCAGGGCAGGGGA
TAGTCATTTGGGAGAACGTGACAGTCTTTTGAATACCGTCAATTGCTCTA
ACTTGGGATTATCTGACATAACATGGGACTGCAATTCGGCCACGACCACC
ATTTCACAGAACCTCCAAAGTCATTAGATTTGAATTAATGAATGGCGTAT
TAAAAAATACACGATTTCTCTTTCACACCGAGTAGGCTTTTAAATCAATA
TGAAAATAATCTGTGTAGTGGAACACATACATGCGAATGTCCAGACGATC
TCAATAGAACGGAATCAACAATCTAACCAGTCAAACTAAATCGAACGCAA
TCGACCGATTGAAATTCGATTGTCGAATGCAATCGAATCTCCATCGAATT
TTACAGTACCGCAATTTTCAGATTCGATTGATGTTAGTTAAGTTATTTCA
TTCAGGTCTTTGAGAGCTTGGATGTTGGGAAGCTGCAAGAATAAAGCCAG
ACAATCTCAATTGAGCAGAATCGACGATCGAACCCCAGTCGAACAACAAT
CAAACTAATCGAATATTACCTAGAATTTTGACATTCGATTGAGATTCAAT
TGCATTCGACAATCGAATTTCAATCAGTCGACTTGCGTTCAATTGCGTTC
AATTTGGTTCGACTGGTTCGATCGCCGATTGAGATCGTCTGGCAGTGTAG
CTCTAAAGCTCTAAAACAGCATCTAATAACATGAAAACCAGAATATGATT
CTTCAATGGGAATCAAAACTATAAAGTGCACTTACAAACATCAATTTGTC
AGATCTAACAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTGTCATCATTGACAATAAAACAAACAATATTCTGTCAAGAGCCTTGTAA
ACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAATCTACCAT
TTTAGCGCGGTCCGAGGATTGAGCCGTGAACTCTCGCAGAGCGCCCGAGC
TCCCGCGTGGCGCGCACCACGGGGATGAAAAACTTCAATCTGTCAATCAT
TTTCTCAAGCGAAGAGTACCCGAAGCAATTCTAGCTTTACGATAGTGCCG
CGGATCATCAATGGATAGTATTCAATTATCATTATCCCTTTATTTTCATT
ACTAGAACTTTTGCAAAAAAAAGGANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGTCC
CGCCTTTGCGGGATTTTGGCCCAAGTGCTTGAGTGCAGCATAGGGTACAA
AGTCCAAATATGCGTTTCCCGTAATTTTTGTATGAAGAGTTAGTTCTACA
CTGTCTGGGAATGTCTGGAACGAAGAAAACCAAATTACAAGTGGCAAAAC
GATGGAGTGTTTGGCGTCACTTGCGCGACAAGTTACACACTCGTTATTTG
TTAATCCCATAAGGCGTTAGGTGGCGGGCGTTCTCTAATACTCCAATCAG
CGTCTGTTCATTTTGAATGAAAACAAAAAAGTTGAAAAGGGCGCACTATC
ACTCAGTGAAAGTTATCGTGACATGTCATGACAGAATGTATGATTGATAA
ACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAAAACAG
TAAGTGAAAATACATACAAGCCAGATATCAACAGTTCCATTTTTCGACCA
ATCGTCCCAAGTTAGAGCAGTTGACGGTAACTAGTTTTAAAATTTGTTAC
TCCAAAGTTAGTTGTTTAATGATAACTTACTCTCCGGTGCCTAATAAACG
TACAGATCAAAATAAACGTACAGGGTCAGGGGGGAAATAATTAATTGGAA
TTAATAAACGCACATGCTGAAATAAACGTACAGGCGAGAAATCAGAGCTG
AAATAGATAAACGTACAGGCTAAAATAAACGTACAGGGAAAAATCTACCA
ATTTTTAAAAAGTAGAGTTCAAATCAAATGCTCAAATTTATAGCAAATCA
TTCAAATTTACTCGTAACATTCAAAATCTCCCACAATATGTTCAAATGTA
ACTAACAACCTTTTCTACACGTCTTATTGAACAAAAAATAACAATTTTTT
CCAATACTGGGTCAAAATAAATAAACATACAGGAGGGAATAAAGGTACAG
GCGGGAAAATTCCTCAAAATGAATAAACGTACAGGTTCTAATAAGGTGCG
TACAGGCGGTAAATTTGACACGAAAAAATAAACGTACATACTTATGTTTA
TTAGGCCGCCGAGAGTACTGAATTAAAATATATTATAATTGATTTCTCAG
GTAAATTTATGCTTGTTCAAATTTTTTGGTCATTTTCAGAAGCAGTTCCA
CCCTCTTAGTTATGATGAACCATACATCAAAAGAAGCGTATTCTGATGTT
GAAAATGAAAATGGCTGTTACTTAGCTGTTCATTTTTGCCTTTTTTGATA
TTTTGGCTAAAAACCTGTTTTTCAGGCCATTTGTGATGACGTTTTAGTGA
TTGATTGTTAACTTTGGTATGTATTTGTTTATGTTTGATTTTTTATTTCG
AAGACCAGCCTACAGCTATGTTGAGATAACAAGACGCATGTAGATTTTAG
AAGATTCTACGGTATTCTGGTTGCAAAATCTTTTAAATCTTTCGATGATG
TCAGCAAAAATTGCAGAAAATCAAATTTTTGGAATATCTGCTGACATCAT
AAAAATTTTAAAAAGATTTTTAAATTGATACAATTCTTGTGCTAATATGG
CTATTATTAAGTTTTGTTAACAAGTTCTTGGGATATTCAATTTTTTTATT
TTATGACGTCAGCACAAATGGCCTGAAAAACAGGTTTCAGGGATCGAATT
AGCGTATCGCATTTCGCAATTCGCGATGCGGTTTTGGATTACTTACAAGC
TAAAAATTGAAAATTGATCCATTTTAGGATGCAAAATCATGCTTATCAAA
AAATTGCGATGCACCTTCTATCCTTATTTCGATGCCTGGGTTTTTAACCA
AAATATCAAAAAAGGCAAAAATTAAATTCAAAAAAGTAGTAGCCATTTTC
ATTTTCTTCATCAGAATACGCTTCTTTTGATGTATGATTGATCATATTAA
GAGGGACGGAACTGCTCCCAAAAGATTACCGAAAACTTGGGCATGCACTA
ATTTACCTGAGTTGTCTTTTGAAATACAACTTTCTTAGGGACAAGTTAAT
TTATCACGTTTAGTACTGGCTGAGTGCCTCCATTTTATTTCTCAAGGTCT
TAGGTTTTCATGGGTTGGCAAACGATATCATCTTCTTATTTTCTACTTTC
CTATCTTCTATTCTAATTTTCTGACTTTCTCAAATGTTTCTAACTGTTTT
AACTTTGTACTGTCGTTTTGCATAAGATTCTCATTTCTGCACTAAGATTC
CTTTGCCACTTTTCTAGCAGATTAAAGACCAGTTTCATAAGTAAACACAA
GATTTTCTGTACCTTTAGAAACAAACCTTTTCCTATCTCATGCTGGTTTA
TCCAAGGAAAAATATCAAAAAAATTCTGAAAAAATGACAAGAATCTTAAA
TGGGCATCTTATACAAAACCGAAGTATTTTTCTGAAATAGGTCTTCTACC
CCAGCTTGAACCACCAAGTGCAAGCTCAACGCCCAACCGCTTGCTCTACA
GCACAGAGACACATCAGAACACTGTCATTCACAAATATTTACAGCATGTA
ATTTTACAGACCTTAACCCTTTTTCAGTCCTAGAATTTCCTAGATAACTT
TTAAACCACAACTGCTATGTTTCTAAAATTAGTAGGAATGAATTAAAGGA
AAACTTATAAAATAAAAATACATATAACATTATTGACAGAGCTGCTTCAG
CTGCTGTAAAGGGAATTTTTTCAGCAAAAATAAAACTTATAAATATAAAA
TAGCTGTATTATTATATTTTTATATCAGCTTTTGTACATCTTGAAAAGTT
AAACCTTACATTGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGGTGGAG
GATATATTATTTTTTTCATGAATTACCCCTGGACACGGGTTATACCCCTG
GACACGGGTTATACCCCTGGACACAGGTTATACCCCTGGACACGGGTTAT
ACCCCTGGACACGGGTTATACCCCTGGACAAACATCAAATCAACCCCGTG
GATACAAAAAATTACCCCTGGACATTGGAATTTACCCCCTGGACATTGCA
ATTTTTTGGTATTTTTTCAATACCCCTGGACAATTCATTCTCCACCCCCC
ATGAACGGATTTTTTCTGGAAGAGCCCATTGCAGATTTTGGGCCATTTGG
ACAATATAATTTTTTTAAACAACCTCTTACAACCATCACAAATTTTGTAA
TGTACTTTTCGGATAAACTCCAAATTTATATTTTAACACTTAAAATTTAT
TTATATAGTTGTCTTTAATAAAAGTAAATGACTAAAAGTTTTGTGCTTCT
GCACTTGTTCAAATTTACAAGTACTTTTTAGATCATTTCTCTTGTACATT
TGAACAAACGCAGAATTGTACTTTTATTGAAAGAAAACTATATCAATTTC
ACTTGGCTCTGGTATCTTGTTGTTTATCATCGAGCACTATTCAGTTTTTC
ATGGCAATGATTTATTTTAACACTTTTTTTAACAAAGTTTTTGGCTCTAT
GTAAGTTATAGAACTTTATATTTCACAGATCTATAGCTAATGATTTATGT
GTTGGAGATATTAGGGGTAATTCACTTGTATGACACTAATAGATGCTTAA
TTCAGGTTTATTTTTACATTTCAGACGCTACTTTATGGATGAGAAAACAC
TGACAAATCACAAGAAGACTAAGAATCATAAAAAGAGGTGAGTTTCCTAA
TTACTCTAGGGGCTGAGTTAGGTAGTTAGGTCCCGTATGCGCATCGGCGT
ATAGTCATTTTTTCTTTTGATCATGAAAGTATAGTCATTGAAGAGTCAAA
AAACGTGTGTAAAATTTAGCATAAAATTTCTGATCGATTGGTATATAATA
TGCAGGGTTTTAAGCTCAAAAAATATTTTTCTTAGGCTAGCAGAGCCTAA
GAGCCCATGTGACGAAAGAAAACTTTGAATCCGCCATTATGGATTTCGAA
ATTCATGTAGAAAAAAAACTTTTCCTGAATTTTATTATTTGAACGCTAGG
CAAGACCCTCCGAAAATTTCAAATAAATTAAGTAAGCCAATCAAATGTTA
CAGCCACGCAAATCTGGAATCAAAAGTAGTCATTTCAAAAAATCGAAATC
GAAAGTGCCTCATATCTCCAGATAACGAAATTTTCAGACCATGATTCTGA
CCTTTTTCTTAATCAGCATAAAATTTGTGATCGATTGGTATATAGTATGT
CTATGTTTGAAGTCAAAAAAAATATTTTTTCAAGCAAGAGGGCTAAAAAG
GGTTGAAAATCTAAAATCCGCCATTATGGAAATTTGTGCCTGATCCAAAT
AACGCCACACACGTTTTCTCACTCTTCAAGGACCATACTTTCATGATCAA
AAGAAAAAATGACTATACGCCGATGCGCATACGGGACCTAACTCAGCCCC
TAGAGTTAATCTTTTCCATCCATTTATGAAGTGGGAGATGATTAGGGGCC
GTCCACATAGAATGAACAAGTACGTACTTACCAGAGGGGGGGGGGTATAG
CCATTTGCGTACATTGTGCTATACAATGAAACACAGAATAGTGTCCTTAA
ACCAATTTATACATTATATGAAGCATTATACATTATATGACATTATATTG
TCAAATAGAACAATCAACTGACCAAACGCACACAGTTTTTTTCTAAACCC
TCAATGTTTTCGCAAGCTCAGCATTTTTGTCATAGTAATTCAGACCTCCA
TGTTTAACTGTCAATCTGGCTTTAAAAATTTGAAAAGTCTGATCTTAGGG
TTTGAGTAACCGGTTCCCCTCCTCTTATTTCAATATTTTCCTTTACATAT
GTGGACCTATCTTTACTTAGTTTTCCTAAATTGTGCACATTATATTTTAC
TGGTTTGAAGCCTTTATTATGATGATCTATCCCCTAGAGATGCTGTTTTG
AATCAATCTCCAAAATTGATTTTCTTCTCCCTTCCGCCAATTTTACCTAA
AAATAATACCCTTTAAATAGGAAACTGTCACATCTAACTTGGGGATTCTT
TTTTATGTTTCATGTGGAGTTCGCAGGATGATCAAAGTGGAGTTTTGGGA
AATTTAATTTGGTGTTCAACATATAGGACCCATTGAAGCAAGTTTTACTG
TGATATTTTTACCCCATAAGGCTTTTAAGTTTTTCTTACAAAAAAATGTA
CACACTCTCGCTTAGAGCTTTTAATTTTTCTTTAGAATGCGGGAACTGAA
AGATAAACCTTACAGCCAAGCAGAAGCAGAGATGGCAGCAGGTATGGGCT
CGTTTACAATTCAAGTCACAAAACAAGGAAAGTCTCTCAATAACAATGTT
TCGAAAGTCAAAAACGCTTCATCAGCAATGGATACTTTCTCGCCGGCATC
CAGTGTAACGAGCACTTCAAACATTATGGAAGGACTTAATATAGGATAGC
CGCTACTTCTAATTCTTAAATAAACTGGTATCCACCTTGAGCCTGTGGTC
GGAGGTGTTGATCAGGTTGAGTTTGTGGCAATGGAACCCTTCCTTTTAGA
GAAGTACGATATGAATAGTGGCTTGAGATGATTTGGTTTCCTAATTAGTT
ATTAACGGGACTGTTTTTTTTCTTCAACAAACTGTGATGCAGTGTAAAGT
GCAAATATCGACTACAAGTGGGGGAGAAGGTGCCTACTTCGCAACATTAA
AAAGAACGACCGAAAGTGACTGTACGTATATTGCGTAAAATAACGACTAA
CAGTTTATAAATACGCATGCGTTTTAACTTTGTTTTGAAAATGATGCGAA
GTAGACACTTTCTCTATGTGACAAGCAATCATATTTTTTATAATTTGTTG
ATAAAAGTTAAATTTTATGATATATTAGATTCTTATTTGGACCGTTTTTG
CGCAAAAATATGTGCCATTTTGAAGTTTCCAATAAAATGGTAGCTGTGTT
TCACCTAAATTTCCCTCGTGATCAAAAGAGCACCCATCTTGAGTAACGAA
TTGATCTTTATTAGGTTTTTCTTGGTCATTTTTTATCCACCAGCCACGTT
TTTTGTTAAAAGCAACTTGATCTATCATGTCTCCGACAGTTGATGTGGCT
GATGCAAATGTCCCACGGAAAACCCACGAATCTGATTCCTTTCCTACTGT
GACGTCCTTGTAAATGGCTATTAGATCACTCTCAACAAATGGATATGGTA
CAGTGAAGCTGATTAGCAAGTCAGTATTTTGGACTCGATCTGAGAGTTCA
TTTAACCCGATCCAGTAATCTGATGTAAAAATTCCATTCACTGAAGAAAG
AGAAAATACTCTTTTTGGATATTTTAGTTGGCCAATGATTTCTCGACCAA
AACCATTGCAACGAGCGTAGCGATATTTTTCTTCTGTTTGACTTTTCAAC
GACATAAGATAAAAATCATTTTTTTTATTCTTGCATGATGATACTATTGA
AAAATCAATCAGCCTTTCTAAATTAATTGCTGATATGAAGGCTGTACTGT
TTTCCTTTCGAGTAAATATGGTACCAGATCGTTTAGTAGCAAACCAATAA
AGTGAACAATCGAAATGATAACTACNTTGTACCAGATCGTTTAGTAGCAA
ACCAATAAAGTGAACAACCGAAATGATAACTATCGAATCTTTGGACTTGA
AAAGACATACAGTTTTTTGTATGGTAACATCTAGTGAGACAATTTTCGAT
GCTATTTTCGTGGAAGTTAGCAAAAGGGTCAATAGGAAGATTTGTGTATC
TATCAAGAATTTCAAAATGAATTCCATCCAATCTTTGAAATGACATTTGA
CTGCATTGTTCAAGGATAACATTCTGAATAATAAGCGGGAGTACAATTAA
AATCCGAAACTTCTTTGCTGTCATTGTTTCCTGAAACGACAATAATAACA
TACCTAAACTTTAAAGGCTTTAAAAGAAATTTTGAATTTTATATTATATT
CTCTTAAAAGAATAATAAAGTTTTAAAATTTTATATATTCAAACTTCACG
ACAATTGATTTGATTTATATTTTGTAAGTTTTCTTTTTTCTTTGTATGCC
GTCCGTTGCATAAATTATACTCAAGAAAGAACAAATGAAAAACGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033177XLOC_033177Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052470-exon-scaffold_214-1575043694:168139..168565TCONS_00052470-exon-scaffold_214-1575043694:168139..168565Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1575043694:162979..163041TCONS_00052470-exon-scaffold_214-1575043694:162979..163041Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1575043694:160199..161480TCONS_00052470-exon-scaffold_214-1575043694:160199..161480Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1575043694:159619..160140TCONS_00052470-exon-scaffold_214-1575043694:159619..160140Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1510915933:168139..168565TCONS_00052470-exon-scaffold_214-1510915933:168139..168565Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1510915933:162979..163041TCONS_00052470-exon-scaffold_214-1510915933:162979..163041Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1510915933:160199..161480TCONS_00052470-exon-scaffold_214-1510915933:160199..161480Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1510915933:159619..160140TCONS_00052470-exon-scaffold_214-1510915933:159619..160140Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1491911889:168139..168565TCONS_00052470-exon-scaffold_214-1491911889:168139..168565Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1491911889:162979..163041TCONS_00052470-exon-scaffold_214-1491911889:162979..163041Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1491911889:160199..161480TCONS_00052470-exon-scaffold_214-1491911889:160199..161480Clytia hemisphaericaexon
TCONS_00052470-exon-scaffold_214-1491911889:159619..160140TCONS_00052470-exon-scaffold_214-1491911889:159619..160140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_214supercontigscaffold_214:159619..168565 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.1853	18.202	7.477	6.20538	39.6645	33.5426	25.1752	24.6738	14.1475	13.3306	15.6718	13.3487	14.0202	17.8868	13.3632	14.3586	13.7635	13.471	6.99095	7.95069	14.2164	12.7838	22.1475	20.4882	18.3281	24.6317	5.95894	8.19822	11.6695	12.5166
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052470 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top