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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052475 ID=TCONS_00052475|Name=TCONS_00052475|organism=Clytia hemisphaerica|type=transcript|length=396bp
gttagaaaaatactaaaatttctCACACGGGACCACGGGACGCAACGATG
TAAACAATTGAAAGAATACTCAAAGCGAAGAAAAAACACGAACAACCTCG
CGCCATCCAGGAATATTATGCTAATGGCAgcttaaaaatgagaaaaatat
TGCTTGACTTAAAGACGAAGGGCCCAATGAACCGTCCGTGACATACAAAT
ATTATCGTCAAGCTGTGAAGTAAAAATTTATGGTAGTGTTACCTAATTGT
AATTTATCGAAAGTGTACGTAAGGtaaaaaaagctaaaagaaTAAAAGTT
TATCTggctaaaaaatataaaagccaTGGATCATTTTACAATTAGAAATG
TCTTTGCcttcttttcgtttttcttctaGCGCCGGACCAGATTTCT Run BLAST on NCBI transcript from alignment at scaffold_214:350664..351786- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052475 ID=TCONS_00052475|Name=TCONS_00052475|organism=Clytia hemisphaerica|type=transcript|length=1123bp|location=Sequence derived from alignment at scaffold_214:350664..351786- (Clytia hemisphaerica)
GTTAGAAAAATACTAAAATTTCTCACACGGGACCACGGGACGCAACGATG
TAAACAATTGAAAGAATACTCAAAGCGAAGAAAAAACACGAACAACCTCG
CGCCATCCAGGAATATTATGCTAATGGCAGCTTAAAAATGAGAAAGTAAG
TGATTATACATCTTGACTTGTTCCACCCACAAACCAAATTCTTGCAAATC
CATTAAAGGGTAAACTTCCGTGCTTCAATACCTCAGAGTGTTTGTGCCCG
TTCCCCGTTGATTGTCGAATTTAAATCAGAAGAAAAATTTCCGGGTATAA
GTTAGAACAACAATCATGGTTAAATTTTGAACAGTTGACTTGGAATTTTA
TAGATGGAAAAACTTCCATGGTTTGAGAGATCGCAAAATATATCTGTCAA
GGTTATTTGTGTCTTTGGTACTTGACGTTTGTCAGCCTGTTAAGAAGTAA
ACTATCATTCTCTGTGCTATAATTTCATTGCTTTTACTCCAGGACTGGTA
GCTTTTATGTGGCACTGAGACAGGGGTATATTTAGAATAGAGCCTTTTTA
GACTAATTACCCAGGGTACTCATTTTTAACGGACAGGGCAGGCCCAGTGA
GAACCCTATCCATTTGAAAAAAATCGTCATCCTCTATTGAAACTTCACTT
GTATGTATAAGACAAGTAATGAATCTAGTAATTCAGACTGGATCTCTGTA
CTATTATCGTAAAATCTAAACCCACTAAAAACAGACCTTTGTTCTATTGG
TTTTTATGTTCTTTTATGTCCTTTTCCTAGCGGGCTAATAAACGACTCGG
ACTTTTTGAGACAGGGACGTTCCCCTCACACAAATGAAACATGTATAACA
ACGCTTCCATTTTTTTCTTCAGAATATTGCTTGACTTAAAGACGAAGGGC
CCAATGAACCGTCCGTGACATACAAATATTATCGTCAAGCTGTGAAGTAA
AAATTTATGGTAGTGTTACCTAATTGTAATTTATCGAAAGTGTACGTAAG
GTAAAAAAAGCTAAAAGAATAAAAGTTTATCTGGCTAAAAAATATAAAAG
CCATGGATCATTTTACAATTAGAAATGTCTTTGCCTTCTTTTCGTTTTTC
TTCTAGCGCCGGACCAGATTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052475-exon-scaffold_214-1575043694:351642..351786 | TCONS_00052475-exon-scaffold_214-1575043694:351642..351786 | Clytia hemisphaerica | exon |
| TCONS_00052475-exon-scaffold_214-1575043694:350664..350914 | TCONS_00052475-exon-scaffold_214-1575043694:350664..350914 | Clytia hemisphaerica | exon |
| TCONS_00052475-exon-scaffold_214-1510915933:351642..351786 | TCONS_00052475-exon-scaffold_214-1510915933:351642..351786 | Clytia hemisphaerica | exon |
| TCONS_00052475-exon-scaffold_214-1510915933:350664..350914 | TCONS_00052475-exon-scaffold_214-1510915933:350664..350914 | Clytia hemisphaerica | exon |
| TCONS_00052475-exon-scaffold_214-1491911889:351642..351786 | TCONS_00052475-exon-scaffold_214-1491911889:351642..351786 | Clytia hemisphaerica | exon |
| TCONS_00052475-exon-scaffold_214-1491911889:350664..350914 | TCONS_00052475-exon-scaffold_214-1491911889:350664..350914 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_214 | supercontig | scaffold_214:350664..351786 - |
Blast
The following BLAST results are available for this feature:
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