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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052482 ID=TCONS_00052482|Name=TCONS_00052482|organism=Clytia hemisphaerica|type=transcript|length=1315bp
CTGATAACAAAAcggtctttttctttttaaaaagattcGACCCTGGTAAC
TCTTCGATATAAAACTCGTACAAGAGTCAAGTGATAAAAagttgcctgaa
gattgtcacaaaagtggcatgaaactgccagtagcagaataaaaaagtgt
cttttctttctgactgaagtgataaaaatataatttatcaATAGATTAAC
TTACTTTAACATATTTGAGAAACATGTATGTCTTTCCAAGCCTCCAATTT
TCTTCTTTGCAACATTCAGTCGTTCTTTCTCTTCCGGCTCATCAAACAAA
TCATCTTTTGTAAACAAATCGAACAAGTATATCATTGATTCGTCACTTAA
GATATGGTTGAAGGTATCCTTGACTTGCCTTGCTGTTTCCCAGAATGTCG
AACCTCTACCCACTTTGACGGTGATATAAGGATTGGACGGCATGTAGTTA
GCGCACTTCCAAGAAACTTCTTTAGTGATTCGACCACGCAAATTTATAGG
GATTTCAATCAGCAAGTTGACAACATCAGGGacagttttttgatttttaa
acatGCAAGCAGCCATAGCACATGCTTGAACTCCACATAAAGCAGCTCCA
ACAGTAATTCCCTTTGCTTTACATTCTTTCTTGAAATTCTCAAATTCGAT
CTCAGTGCTTGAATATGGTGTAAACACTACTCGATCATtctcttcaaatt
caaaataacaatTTGCAGAATCCATAACGTTCAAATGAAACTCTTTAAAA
CGCTTTTGTTGTTCACGAAACTTTTCTTCGGAACCAAAAAATTCCAGTCG
ATAATCTTCAAAAGATTTTGGAGCTGGATATTTCATTGGTTCGTAGTTAG
CATCTTTTTGAAGCTCTGAATAAGTCTCTAAAATAAGACTAGTCATAGCA
GTAATTCCGGTCCCATCCATACAGTAATGACTTGCAACAGCGATGACCAC
AGCTTCTTCCTTACAAGGTTGAATCAACATTAATTTAAAAGGTGGATAAG
TTTCAAAATCTGTTCTCAAATGTTTATTATTGTATTCTATACAAACGTCT
TTCCAATTAGCAATGTTTGGCAACACTTCAAAATACTGTTCTATCTCTTT
TAAAGGTTTGAAGTAAATTTCTTCTCCCTCGAACCTTAAAACAGCGTTGA
TGTTGGGCTGAGATTTGATGACTTTGTAGACAGCTTGACTAAGTAGATGA
GTATCAATTTGACATTTGGTTTTCAACAATGTTGGACATActatattgta
tattttttttcggtcGGCATTGGCTCTTTCACAAAAGCCGAATTTTCTTA
TTTGTTCTGACAtct Run BLAST on NCBI transcript from alignment at scaffold_215:53041..54355+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052482 ID=TCONS_00052482|Name=TCONS_00052482|organism=Clytia hemisphaerica|type=transcript|length=1315bp|location=Sequence derived from alignment at scaffold_215:53041..54355+ (Clytia hemisphaerica)
CTGATAACAAAAcggtctttttctttttaaaaagattcGACCCTGGTAAC
TCTTCGATATAAAACTCGTACAAGAGTCAAGTGATAAAAagttgcctgaa
gattgtcacaaaagtggcatgaaactgccagtagcagaataaaaaagtgt
cttttctttctgactgaagtgataaaaatataatttatcaATAGATTAAC
TTACTTTAACATATTTGAGAAACATGTATGTCTTTCCAAGCCTCCAATTT
TCTTCTTTGCAACATTCAGTCGTTCTTTCTCTTCCGGCTCATCAAACAAA
TCATCTTTTGTAAACAAATCGAACAAGTATATCATTGATTCGTCACTTAA
GATATGGTTGAAGGTATCCTTGACTTGCCTTGCTGTTTCCCAGAATGTCG
AACCTCTACCCACTTTGACGGTGATATAAGGATTGGACGGCATGTAGTTA
GCGCACTTCCAAGAAACTTCTTTAGTGATTCGACCACGCAAATTTATAGG
GATTTCAATCAGCAAGTTGACAACATCAGGGacagttttttgatttttaa
acatGCAAGCAGCCATAGCACATGCTTGAACTCCACATAAAGCAGCTCCA
ACAGTAATTCCCTTTGCTTTACATTCTTTCTTGAAATTCTCAAATTCGAT
CTCAGTGCTTGAATATGGTGTAAACACTACTCGATCATtctcttcaaatt
caaaataacaatTTGCAGAATCCATAACGTTCAAATGAAACTCTTTAAAA
CGCTTTTGTTGTTCACGAAACTTTTCTTCGGAACCAAAAAATTCCAGTCG
ATAATCTTCAAAAGATTTTGGAGCTGGATATTTCATTGGTTCGTAGTTAG
CATCTTTTTGAAGCTCTGAATAAGTCTCTAAAATAAGACTAGTCATAGCA
GTAATTCCGGTCCCATCCATACAGTAATGACTTGCAACAGCGATGACCAC
AGCTTCTTCCTTACAAGGTTGAATCAACATTAATTTAAAAGGTGGATAAG
TTTCAAAATCTGTTCTCAAATGTTTATTATTGTATTCTATACAAACGTCT
TTCCAATTAGCAATGTTTGGCAACACTTCAAAATACTGTTCTATCTCTTT
TAAAGGTTTGAAGTAAATTTCTTCTCCCTCGAACCTTAAAACAGCGTTGA
TGTTGGGCTGAGATTTGATGACTTTGTAGACAGCTTGACTAAGTAGATGA
GTATCAATTTGACATTTGGTTTTCAACAATGTTGGACATActatattgta
tattttttttcggtcGGCATTGGCTCTTTCACAAAAGCCGAATTTTCTTA
TTTGTTCTGACAtct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052482-exon-scaffold_215-1491911889:53041..54355 | TCONS_00052482-exon-scaffold_215-1491911889:53041..54355 | Clytia hemisphaerica | exon |
| TCONS_00052482-exon-scaffold_215-1510915933:53041..54355 | TCONS_00052482-exon-scaffold_215-1510915933:53041..54355 | Clytia hemisphaerica | exon |
| TCONS_00052482-exon-scaffold_215-1575043694:53041..54355 | TCONS_00052482-exon-scaffold_215-1575043694:53041..54355 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_215 | supercontig | scaffold_215:53041..54355 + |
Blast
The following BLAST results are available for this feature:
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