TCONS_00052556 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052556
Unique Name	TCONS_00052556
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1787

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_218:136798..146271+

transcript sequence

>TCONS_00052556 ID=TCONS_00052556|Name=TCONS_00052556|organism=Clytia hemisphaerica|type=transcript|length=1787bp
TAGCAAAGTTGGAAGTTATGGATATGGAGGAAAATATGGTGTTCAGAAAG
ACCGAAAAGATCAAGCAGCTGTTGGTTATGAGCATCaagaaaaattggca
aaacatGCTTCACAATCAGATCATTCAAAGGGATTTGGCGGGAAATATGG
TGTTTTGAAAGATAGACAAGATCAGTCAGCTGTAGGATTTGATCACCAAG
AAAAACTTGCAAAACACAATTCCCAACAAGATTATTCCAAAGGGTTTGGT
GGTAAATATGGTGTTTTGAAAGATAGTCAGGATAAATCAGCTGTAGGATT
CGATCACCAAGAGAAATTGGCGAAACACGATTCGCAACAAGATTATTCAA
AAGGGTTTGGAGGAAAATATGGCGTCATGAAAGATAGACAAGATGAGTCT
GCTGTTGGATTTGAGCATCACGAGAACCTTGCAAAGCATGACTCACAAAA
agATTACACGCAAGGTTTTGGTGGGAAGTACGGAGTTCAAAAAGATAGAC
AAGACAAGtCAGCGGTCGGTTTTGAGTACCAAGAAAAATTACAACAACAC
GAATCACAAACAGACCATTCCAAGGGTTTTGGTGGAAAATATGGCGTCTT
GCAGGATCGACAAGATAAATCTGCTTTAGGGTACGAGCATCAAGAAAAGC
TTCAACAACACGATTCACAAAAAGATTATTCCAAAGGTTTCGGTGGAAAG
TATGGTGTCCAAACAGACCGCTTCGATGAATCGGCTGGAACATTTGAGCA
GATGTCAGGTGTAACATCAAGTTATCAAACGGACAAACCAAGAGCGGAGA
GTGGAAGTGCCGGAAGTTTGAAAGCACGATTCGAACAAATGGCCAAACAG
GGGGATGAGGAGGCTCGTGAAAGAGCGGCCGCTGAGAAGAAACGTCGTga
agaaaaagaacaaagagAAAGAGACCAGGCCCGTCAAGCTGCTGAAAAAC
TGGAAGAAGTTCAAAGAGTCCAAAATGAAGCAGCTGAAAAAGCTTTAGCA
GAACAGGAAGCTCAGCAGGAGGAGAGTGTTGAAGAGGACACGCCCTCCAA
CGAAGGTGGTTTCTCATACACAACACAAGAAGAAGATCAACCTGCCCAGC
AAGAAACACCTGTCCAACAAGAAACACCTGCCCAACAAGAAACACCTGCC
CATCAGGAAACTCCAGCAGCTCAAGAAGAGTCTTCCGGTGAAGATTTTGG
CGTGATTGCGATTGCACTGTATGATTATGAAGCCAcTGCTGAGGATGAAA
TCACTTTCGATCCTGATGAACGAATCACCAACATTGAACAGATCGATGAG
GGTTGGTGGCGTGGAACGTGCCGCGGAAAACACGGGTTGTTCCCGGCAAA
CTATGTCCAGTTGGAATAAAAAATGATATGATAATAATTGGGTGAAATAT
GACTGAGTTTCTGCTCAAAATAACTTAAAAATGGAAATCTTGGagacttt
tatatttttctaaattaaacaTCGAAATGTATTTTAAATCGCATATATAC
CATGGTATGTCAAATTGGGAATACTTGAACAAATCTATAGggaatatttt
gataatttatttgatttctttttgtattataattttgttacactttttgt
aatgttttaaattttgttctctagctcaaatctttgttttacatttttcg
tttttcgaccgtctgaaaatttaaatgaaCTATAATGAAGGAGTAATACT
ATTTCAACGATTGAGTAAAAGTTTCATCGATAGATTTGTAAaattaattg
taaaatttaataactttaaaatcattttaaagaattt

Run BLAST on NCBI

transcript from alignment at scaffold_218:136798..146271+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052556 ID=TCONS_00052556|Name=TCONS_00052556|organism=Clytia hemisphaerica|type=transcript|length=9474bp|location=Sequence derived from alignment at scaffold_218:136798..146271+ (Clytia hemisphaerica)
TAGCAAAGTTGGAAGTTATGGATATGGAGGAAAATATGGTGTTCAGAAAG
ACCGAAAAGATCAAGTAGGTCCAAGAATTTTTAAAACCATTCAATTTTAA
ATATTATAAGATCTCATTAATATCGTTTGGATTTAGTTGTCACAGATATT
TGCAataaaattagccaaaataacTTTCACTTATCATTTTANTGTCACAG
ATATTTGCAATAAAATTAGCCAGAATAACTTTCACTTATCATTTTAATTG
TGACATATTCAGGCAGCTGTTGGTTATGAGCATCaagaaaaattggcaaa
acatGCTTCACAATCAGGTTTGAAAGTCtattcttttgattttattttac
tGCCCCTTTAAACCCTTAAACCCttttaacttcaaaaaactTAGTTTTCC
CCAAATTTTGCACTCAAGAAGGCCTGTTGAAGATTCCCCCTAAAAAGTAA
CAACTGCTCATTTCAAAGTCAAAAGTTGATTTCCATCAGACTTTTTTAAA
GCTGTCCCTCTTCAATTAAATTTTGGATCTGAAGCTACGATGAATATACC
CGTGAATACAGAAGCAatatttaaatgttttaaatttttgcagATCATTC
AAAGGGATTTGGCGGGAAATATGGTGTTTTGAAAGATAGACAAGATCAGG
TGAGagtacaaacaaaataaaacaaaaaaatagttatttttatattttat
ttatgtaCCAAAAGACAACAATTTAGCTTCGCATTGCTTCAATAATTACC
AAAAAGACTGAAGGAGCCGACTTAGTTAATATTTATTCCTTTCTCCCAAT
TATTCCAGGACAGCTGCTTGccaaaaaagttacaaagaatTATCAATGAA
TTTATTAAGATagctatgaacttaattttcGTATTATTCTTTTTCATACA
TATTTAGTCAGCTGTAGGATTTGATCACCAAGAAAAACTTGCAAAACACA
ATTCCCAACAAGGTAATCAAAATTACATCCTAACATGTTTTTCCGTCCAA
ATCAACAAATGACACTCAATAATTAATAGACTTAAATCAGAATTAGATAT
TCAAGATCTATTTGGATTGAAAAAGGATAGACCTTCTCACTTCTATTTCA
AAAGCCACCAGATggaaaaacttatttttcagtTAATTTTTTCTCTTGTA
ATTTTCTCTTTACTGGTTAATTAATTCGTTTTAATTTGCAGATTATTCCA
AAGGGTTTGGTGGTAAATATGGTGTTTTGAAAGATAGTCAGGATAAAGTA
AGTTGTACTTTGGCCAAATGGATTACTCTTTGCTGGAAAAGCTTTCTCAC
TAAATTCACATTTTCAACTTAATGATCCAAGATGGGCATGTTCTTGAAAT
CCTACTATCATCAAATAAAATTTCGATCATTTTtatattgtaaaaatatt
tcgtGATTACAATAACTTTTGAAAGTTATTTTCTCTTTCATTTTTAGTCA
GCTGTAGGATTCGATCACCAAGAGAAATTGGCGAAACACGATTCGCAACA
AGGTAAGAATAAACTTTTTGTTCCAAGATGATTTTTATATCTTCTCTTAT
TTCAGGGTGGGACCGGTATTAAATATAAATACTGAAAAGGTTTTCGAGTA
TTTTTTGCATACCACCACCCCATTTTAGAAAACTGGTATTTTAGTCTTTA
GTATTTTGGTCTTCTCAGGACAAATTTTGTCTTCTCGAGACTATTTTTCC
CAAAAGTGCTGATTTTTGCAGCATAACATTCATTTTTTGCAAGAAAAAAC
ACTAATTTTAGTACCAATGTACTAAAAGAAttcttaaatttcatttttga
caCCACCTTTTTGGTACTAAAAAaggattttaagttttttgggAATACTC
ACTAACAGCCCTTTCGATTGAGAAACTTATTTGCCATACTCACCAGCTTT
GTCAGATCCAAAATCTCAATGTCCAAAGATCACAATTTGTGGCAAAATCC
TACACCGCTACGCCGCCATTTTGATTTCCGTATCGTGATGCttcgtcagc
agtttttctGTTAGGGTTTTTTGAGCGCGAAGTGTTTATACGCGCGGGcg
tttttttaaccaatcaaattgccgattggcattgttttgctttagcattg
gaaggtcttctatttttcaaaatctttgtcaaaAGTGCCAAAGATTGGAG
TTCGAAAagcgaaaagaacacaggtctcgTGGGAACATTGTTTTGTATGG
ATTTAAGTTCCAAAAATGTGAATTACGTGTAATGTTCAAGCCCTATCAAT
CCTAGAAATAAAATTGTGAcggaatactttaatgggataaacttttgtgg
ggattgaatttcgcggatttggcggatttggatGTCATTAAATTAAGTCC
CAatagaaatttggaagggcctcatccgcgaaatatttcttaacaaaact
caaaatatgtcaaataaatactatttgaatggttaattgcatcaaagagg
cgcaaataatgtgtatttcaacaaccaacatgcatgatttgacagtaaaa
gtcacaaaatcgtgaaaatattcacccaatagtgccacccgcgaaattaa
gtccccgcgaactttttgaatttcgcggataggcccaaccgcgaaattta
atccctgcgaaaatttatcccattaataAACCAAATTTGAAATGCAGGca
gcaacgaagctcgctttaAAGACACAATAGAAGATAGACGTCtagtcgtt
tatatgtttatGGTTTCAATGATTTGTTTAAAAAACTGCAATACTTTTGC
AAGATCAACATTTTCGTCGTAGCGATTCAGACCTCGTTTTTTATCCTGCC
AATCTAGCTTTAATAGTTGTGTTAGCAAATCCAATCAAACAAATGTTGAT
TCTTAATTTTCAGATTATTCAAAAGGGTTTGGAGGAAAATATGGCGTCAT
GAAAGATAGACAAGATGAGGTAACAAACCCAAAATCGCATAGGATTTTCA
TTACTGTTGCTagccttttcaaaaatattttgtttcttgtcaGTGCCCAA
AGAGAATTGGACCTTTACTTCTTATGATGGCGCGTAATTTTGTGAAGCCA
AAGGTCAATTTTGGATGTTTGATTCCGGAGACCAGattatttcaaatctt
tttccttcaTCTATCATAGTCTGCTGTTGGATTTGAGCATCACGAGAACC
TTGCAAAGCATGACTCACAAAAaggttttcatttcttttcgaCCTACATT
ACTTGTCTTCAATCTAACGTGTTTAAAAATATAGCACTTCTTAGCAAATT
TACAATGTCCTTTCCTTtggaaatcaatttttttctaatgtTCTATGGAA
CGTCTTCCAACTTGAATAAAATCTGTGATACTTgttatttccaatttttc
tccTCCACAGATTACACACAAGGTTTTGGTGGGAAGNCTTCCAACTTGAA
TAAAATCTGTGATACTTgttatttccaatttttctccTCCACAGATTACA
CGCAAGGTTTTGGTGGGAAGTACGGAGTTCAAAAAGATAGACAAGACAAG
GTGAAGTTCTATTCTTATCTTTTACATTTACAGTTTTTctaatacagttg
acgctctctaattcgatcttcaaggggaattggatttttatcgaatgaag
gagcttatcgaataaggtaGTGTCGTTAACgagttgacggggactttaga
tttcatcgaataagggagtccatcgaatagtagaacgtccatcgaatagt
agaacgtcgaattagagagcgtcaactatattacattgagaaattcaaaa
ttcaaaacgtcTAAATTACCCAACTCtgtattttaacaaaaatttgtaat
tcttttttcagtCAGCGGTCGGTTTTGAGTACCAAGAAAAATTACAACAA
CACGAATCACAAACAGGTATTCACAACTTTCAATATCGACAATTGCTAAC
GGTAGAATTATAAGCTTGTTCTTGAGCTCCTTTGAATTTGTAAACACGAT
AACcggttttaaaactttttttaattgttatcGAGAAAATGATTTTACTG
CCGTGATAAAACTTTGCTTTCCATCATCCTTTATAGACCATTCCAAGGGT
TTTGGTGGAAAATATGGCGTCTTGCAGGATCGACAAGATAAAGTATGGAT
TTTGAACAATAGTTAGCCTAGGAACCTGTTGATGAAAACTCGTTTACTGA
ACCTGATCCATCCGATTGCCATGACCTCAGCAACGGGTTGGGTTGCCAGG
GCAGACCTCACACAGTTTTCTATGCTCATCTTTTGATTAGTTTAGAGATT
TCAAAGTAATCAAATGACACTAGGACAGTTACTGtagaatttcatatttt
tagaaTGGGAAAGCATTAAGAAGACTTCAGAGCCGATTTGAGCATATTAA
TTTTTAAACAGAAATGTAATTGAAATATGTCTTCTTCAGTCTGCTTTAGG
GTACGAGCATCAAGAAAAGCTTCAACAACACGATTCACAAAAAGGTATCT
ATTTCATGAAATGTCATTcgcaaattattttcttttatattaCTCAATTT
CTCGCAAAAAAAAACTGTCCCTAAAAGTACTATCAGGGATGCAGTTTTTG
TGCCATTTTGTTTGCTTTCTGAGAAGAAAACGGCTTCATTTCAACCTTTA
CTTTCTTATGTTTTAGATTATTCCAAAGGTTTCGGTGGAAAGTATGGTGT
CCAAACAGACCGCTTCGATGAAGTAAGCATTCTCACAAAATAAGCAACTC
AATTTTATTGTACCTTTTGTTTCGTCGCCGTTTAGCGGACTGTGTTCTAA
TAATAACTACGAACCAAGAAACGTCCATAAATCTATATATCGATTACAAT
TTTAGTCGGCTGGAACATTTGAGCAGATGTCAGGTGTAACATCAAGTTAT
CAAACGGACAAACCAAGAGCGGAGAGTGGAAGTGCCGGAAGTTTGAAAGC
ACGATTCGAACAAATGGCCAAACAGGGGGATGAGGTAATCATTTCATAAA
ACGATCTCACACAGAAATTGAGATGATCGAGCTTGGCGATGTATTTTACT
CTATTGCTGGATCCTTCAGTCGGATACTGGGATCGCAGTTAAAGAATTAA
GGATCGCTTTTGGGGTGGCTTGTATTGCTTTAAAGGAATAACTATAATAC
AATCTCTATGGGTGGCCCTGTTTTGAGATTTAAAGGGACTTATTATCGTC
TTTTGGTTTatctttaaaagttatttttaaaatcttttttatcgCTCTCC
GTAGGGTCATACaagtttatatttttatgttaTGTAAAATCTTTCCGGTT
tatttaaaactatttaaatCTCCCATGGCTTATGCAAAAACGTAAGAGGA
AGAAATTAATTAGTTCGTTGCTGTGATTATACTCGTATTGACTTCCCTTT
TTCGTAAGGgaaacaaaaatagaaatattccATAATGAAAATCGTGCTGT
TTTTCAGCCAGTCTACTTTATTGACTCGACCTTGGGTCCAAGAATCATGT
TTTGAACCCTTTTAATGGGATTTTATGATGATGTCAATTTTCAGTGCAAA
CCCCTGCGGCGTAGacgtagtggtatagtggttatcatcTTGAACTCCCA
AATGAAGGGAAATGCCGAGAAAACCGAATTCATTGCTAACAGCATCGATA
ACGAATTAAGTATAGCAATTCAAGATCAGTGGGTTTCAAATAGCAACACA
TCTAAGATATTAGGAATGACTTTTGACAACCATGTCACATTCGAGAATTA
CATCGAACAACGCTGTAAAAAGGCAAGTCAAAAGATAAGTGCTCTAGCGA
GAATAGTTCCTCATATGAATCAAGATAAACGACAAAAACTAATGaatgca
tttttcaaaagtctGTTTAACTATCCGTTAATTTGGATGTTTCATAGCCG
CCGCCTAGAAAATAAGATAAACCATTTACATGAACGATGCTTAAGACTAG
TCTTCCCTgaagaaaatttgagttttgaaGAACTTCTAGAGAAAGACAAT
TCAGTAACTTTCCACCATCGTAATATTCAGCTTCTGGCAACAGAGCtatt
caaatgtaaatcaaacaTTTCAAAGCTAAATGATGGAATATTTGTTCATA
ATGAAAAGTCTACGAATACACGACATCAAACGTTTTTTAAACCTAGAAAC
ATCAGAACAGTTTTCCATGGTGAGGAGTCTTTATCCTATCAAGGCAAAAA
TATGGGAATTAGTTCCCTAAGAACTTCGACATCTTAATGACCTTAAGGAA
TTTAAAGACAAAATTAAGCATTGGAAACCAACGTTATGTCCGTGTAGAAT
ATGTAAAGTGTACATTGATTGTGTTGGCTTCATTTAAGAACTATATAACT
TGTAAATAGGTTGACTTATATTAGCCTAGTAGCTATTTGTTTTTATGTCA
ACGATAAATAAcaattacaaacaaacaaacaaaaaaaacctgggaggccc
gagttcgataTCCACCGTGTCATTACTcagatacaagagtgtgggtagat
tagacTGGCATTGTGACGTGTCGTGGCACTAATAAGGCTCGGCCTCGTGT
GAGGCATCAGGTGTgatggtatacgccatggcttggcaACTGTCTGTTaa
gtcgcagtgtctgtcagcgctTTGATTCCTACTCCTTAGGAAGTAGGCCC
CATCCGGAATCATTCGGAGGGCATATATCTATCTACCCCTGaaaacaaga
tttttttaaagttttcaataaTAAATTTCCATTGTTCTACTCGAAAGATC
ATGAATATTAGATACGTAAATAGGTCGTTTTTTTAAATTACTTCCAATTT
GATtaaccccccccctaaaatggtcaaaaataagaCTTTCGAAGCAGTCT
CGACGGGTCTTGAAGCGTACTAACTGAAAATGGTATGGTTCATAGGGTTC
GGATGGCTAGGTAACGAGATACTTGGGTGTAAAGTTTTACTGTTTCAACT
TAAATATCGTAAAAGGTGCTGAATTTTGCTGTTATCCATTCCATCAATTG
AGGATCTTACTTGCGGGAGTTCCGCACTGACAATGGGTGAAAATTTTACT
TGGTTGCATTAACTCACTTATCCTTCATTATTTACTTTGTAGGAGGCTCG
TGAAAGAGCGGCCGCTGAGAAGAAACGTCGTgaagaaaaagaacaaagag
AAAGAGACCAGGCCCGTCAAGCTGCTGAAAAACTGGAAGAAGTTCAAAGA
GTCCAAAATGAAGCAGCTGAAAAAGTAATTAACACTCAAATTGTCCTCGA
ATCTGTTTTTAGATCCAAATAtcctatttttttttcaatacttACCAGAT
ATATACCGGTAGATATATAGGCCGAAAAGCTTCGGCATCGTCAGTTCAAC
CTGTACTACGGGAGCCAGGGGTGGTGCTGTCGGAGTGAAAGTAAGCAGGG
GAGATTGACGCGTGTACCTCATACCCCCATACCTCACTCGCCTCCTCAGA
CTGCTGTGTATGGAGGGTGTCAGTTGTCTTCATGTGGTGCCCCTGTTTGG
AACGAAACAGATCTAGAGGATGGGATTCACTCAACGCATTAAATGATGTG
TGGAAAGCCAATATTGacaagaaaatcaaagtcaaagtcTTCAAACAGAC
AGTTGAATCAATCCTCCTTTATGGGTCAGAATCATGGGCACTTTCAAAGT
CTCTTGCAAAATCGTTAGACGGGAAATATACAAGAATTCTTAGAGTTGTT
CTAAACGTTCCGCCAAACACCCTCGTGAAGGTGAAAGCCATGGCTCATGA
AGGGCGAACTGTGGTTGTGGGAACAAACATTTGGCAATGATTGTCTCGTT
GACCATCAACGATCATCACATTTTTACATTCTAAGTATAATGAaagtaat
ctttttttttcatattctgCGTAGGCTTTAGCAGAACAGGAAGCTCAGCA
GGAGGAGAGTGTTGAAGAGGACACGCCCTCCAACGAAGGTGGTTTCTCAT
ACACAACACAAGAAGAAGATCAACCTGCCCAGCAAGAAACACCTGTCCAA
CAAGAAACACCTGCCCAACAAGAAACACCTGCCCATCAGGAAACTCCAGC
AGCTCAAGAAGAGTCTTCCGGTGAAGTATGTGCTCTTTTTATCTCCTTCC
CTTTTTCCTCTTGGTCTTATGTAATTTTGCTTTACGTGCGATAATCATGG
TACAATAAGATCGTATTGGAGGAACTAAAAAGCGTAGTAAAGTTCACCTA
TCAATAATGGTGGATGTTGTATTTTAGTAAAAAGTCTCCCTAAAAAACCA
AATGATCTCGTCCAACTCATCAAAGATCTTGTCCAACTCAACAAAGATCT
TGTCCAATAACAAGTAAAGcgaattttatttcaaaaaatcttcttaaaaa
catgaaactatTAAAACATCCCTAGTAATGATAATAACGtggaaaattaa
caaaaaaaagttattattttccagaaacaaaaaaatgatgatTCGTTTAT
CTTTTCAGGATTTTGGCGTGATTGCGATTGCACTGTATGATTATGAAGCC
AGTAAGTATAGGATGACTATACCCAGTTGTTCGTCAGTGTGCTTTATTTC
GATTGCTTTcctcaatgaaaaaaaattttttaggataatatttcttggaa
taCTGTCTTTCGACGCAGGTCGAGTTTAATGGAATGAGGTTCAAAAGATT
TACGGGGCTAATTAATTTCCTTAAGTAATTTCGCTTGGGTGATGCATTAT
AGAAGAAAAATATCCaagtgttttttttgttttttaaccgGCGCGGTCAG
TTAGGTAGATGCGACTGGGTCGCTAGTGGCTTTGCTAAGTCATCAAATTG
CACTTCTCCTTTGAATAAGTTGTAAAGTTTGAACTCGCTGCTTTCTCCTT
TGAATAAGTTGTAAAGTTTGAACTCGCTGTTTTCTCCTTTGAATAAGTTG
TAAAGTTTGAACTCGCTGTTTTCTCCTTTGAATAAGTTGTAAAGTTTGAA
ttcgctgttttgttttttgtagcTGCTGAGGATGAAATCACTTTCGATCC
TGATGAACGAATCACCAACATTGAACAGATCGATGAGGGTTGGTGGCGTG
GAACGTGCCGCGGAAAACACGGGTTGTTCCCGGCAAACTATGTCCAGTTG
GAATAAAAAATGATATGATAATAATTGGGTGAAATATGACTGAGTTTCTG
CTCAAAATAACTTAAAAATGGAAATCTTGGagacttttatatttttctaa
attaaacaTCGAAATGTATTTTAAATCGCATATATACCATGGTATGTCAA
ATTGGGAATACTTGAACAAATCTATAGggaatattttgataatttatttg
atttctttttgtattataattttgttacactttttgtaatgttttaaatt
ttgttctctagctcaaatctttgttttacatttttcgtttttcgaccgtc
tgaaaatttaaatgaaCTATAATGAAGGAGTAATACTATTTCAACGATTG
AGTAAAAGTTTCATCGATAGATTTGTAAaattaattgtaaaatttaataa
ctttaaaatcattttaaagaattt

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033237	XLOC_033237	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_218	supercontig	scaffold_218:136798..146271 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
91.2574	72.0462	106.276	100.619	66.8818	54.249	79.431	82.0306	57.1327	76.3028	48.8915	32.7857	42.9084	45.2127	53.4673	53.9187	52.8577	56.3093	45.707	61.3921	51.7349	45.7814	33.3153	32.0483	54.9141	49.4197	35.8555	40.3034	48.8014	44.4333

Blast

[Close]

BLAST of TCONS_00052556 vs. Swiss-Prot (Human)
Match: SRC8 (Src substrate cortactin OS=Homo sapiens GN=CTTN PE=1 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 1.400e-103
Identity = 164/270 (60.74%), Postives = 214/270 (79.26%), Query Frame = 2

Query:   44 QKDRKDQAAVGYEHQEKLAKHASQSDHSKGFGGKYGVLKDRQDQSAVGFDHQEKLAKHNSQQDYSKGFGGKYGVLKDSQDKSAVGFDHQEKLAKHDSQQDYSKGFGGKYGVMKDRQDESAVGFEHHENLAKHDSQKDYTQGFGGKYGVQKDRQDKSAVGFEYQEKLQQHESQTDHSKGFGGKYGVLQDRQDKSALGYEHQEKLQQHDSQKDYSKGFGGKYGVQTDRFDESAGTFEQMSGVTSSYQTDKP-RAESGSAGSLKARFEQMAKQ 850
            ++DR D++AVG+E+Q KL+KH SQ D  +GFGGK+GV  DR DQSAVGF++Q K  KH SQ+DYS GFGGKYGV  D  DKSAVGFD+Q K  KH+SQ+DYSKGFGGKYG+ KD+ D+SAVGFE+     KH+SQKDY +GFGGK+GVQ DRQDK A+G+++QEKLQ HESQ D+  GFGGK+GV  +RQD +A+G++++EKL +H+SQ+DYSKGFGGKYGVQ DR D++A TFE ++ V+S+YQ   P  A +    +++A FE +AK+
Sbjct:   91 EQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQGKTEKHESQRDYSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLQLHESQKDYKTGFGGKFGVQSERQDSAAVGFDYKEKLAKHESQQDYSKGFGGKYGVQKDRMDKNASTFEDVTQVSSAYQKTVPVEAVTSKTSNIRANFENLAKE 360

HSP 2 Score: 107.842 bits (268), Expect = 1.740e-24
Identity = 42/75 (56.00%), Postives = 55/75 (73.33%), Query Frame = 2

Query: 1139 ETPAHQETPAAQEESSGEDFGVIAIALYDYEATAEDEITFDPDERITNIEQIDEGWWRGTCRGKHGLFPANYVQL 1363
            E P H     +  +    D G+ A+ALYDY+A  +DEI+FDPD+ ITNIE ID+GWWRG C+G++GLFPANYV+L
Sbjct:  474 EAPGHYPAEDSTYDEYENDLGITAVALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGVCKGRYGLFPANYVEL 548

The following BLAST results are available for this feature:

BLAST of TCONS_00052556 vs. Swiss-Prot (Human)

BLAST of TCONS_00052556 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SRC8	1.400e-103	60.74	Src substrate cortactin OS=Homo sapiens GN=CTTN PE...	[more]

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TCONS_00052556 (transcript) - C. hemisphaerica