TCONS_00052576 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052576
Unique NameTCONS_00052576
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1921

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052576 ID=TCONS_00052576|Name=TCONS_00052576|organism=Clytia hemisphaerica|type=transcript|length=1921bp
GGAATTTCAGATATTCAATTTAGAGGAAGCTGATAAGTTCAAAAGAGTGG
TTGCGTTAAGAAGGAAACTACGAGACTCCGGATCTCAAGGCTGTTCACAG
TTAATCAGGAAAATATAAGATACATGAATCAAATTACGAtagaagaatca
tatttttgaaTGACTTTAAAACGAGGAGACACGATGACGATGAATTCGTT
TGGAAATCACCACAATAATCATCAACAACATTCAAACAAACAGAACACCG
ATACTGGACTGAGTTTGAATTTGGCCGTGGTTGGATCGAAAGGTGCTGGA
AAATCAGCAATCACTGTCCGCTTCTTAACGCGTCGCTTTATCGGAGAATA
TGCATCACAAGCAGATGTATGCATCAATCGTAATATCGACGTCGCTGGTC
GTATTGCAGATGTTCACGTTAAAGACACCAATGCTTGCGATTGGTTAAAA
GGTCCGTCAGCATTAATTGGTTGGTCGACGGCTATCGCTATCATTTATTC
CGTCACCGATAAGAAAAGCTTCGAACTCGCTACTTATATATTAAGTCAAT
TAAACATCACTAAAAGACTAGAAGCTGATAATGTATTACTATTAGCCAAC
AAATGCGACTTAGAACATCTCCGACAAGTGAGTCGTGATAAGGGAAAAGA
ACTAGCCATGAAGTACGGTACACAATTTTACGAAACATCCGCAGCGAACG
ATTTAAACGGCGTACAGCATGCTTTCGAACGGTTACTATTCTCAGCTTTA
TCCAGTCAAGAATGTAAAGTACAATTTAATAATTATACTGAACAAACGTT
TCCGGTACAGCAACGGAAGTGCAATCGAGTGCAGCGTGACTTCAGACGTG
ACAATAGTGCACGTTCTAATAAACAATTACGTCGTATGTCGACGGGTTCG
CATAGCTCTTCAGTCGATACAATGTCTACGATATCGGATGATGATCGCTT
TTACGCTTTTAATATAGACTCTTCACATTCATCGACCTTCTCCACACCCG
ATCAATCACCGACGACGTCGCCCGTCCCATCTGCTGGACGACGAAAAATT
TCGTTACCAGTCTTGTTAGAGAAAATGGGTCTGACGTCATCTTCATCTTC
CAATCATCAACATTCGAGCCGTAAAGTTTCAATGGCTCCAAGAATAAGGT
GACGGTAAAGAGAAAGAAAGTTGCACAAGAAGATCTAACGACAAGGAGta
atttttgacagattttggTGACCACGAGAAGGTGGAAATGCTTGGAGATT
TCAATAAATGGTTGAGGCATTCGAATCAGAAATATAACCAACAACTTGGA
ACCCATATGTGTGCGGAACACAAAAACTGATAAATGGATCTTCAAATCAG
AGGAAAGAAAACACGTTATAAAGAACAAGGTACAATTGTTAGGCTTGTCA
AGACAATGTGGAGGCTATCATATACCTGTTTTTAGAATTTACCTCATAAA
GACGTTAAAATGTCTTGAAATTGACTTTAAGAATTTTAAGAATTCATGCA
ATGTGTACCATTTCTCCTTGTGACCGACACCTCGCCACTATTGAGTTGAT
CAGGAGATTTACAGGAAGTGACAAGTTTCAATGCTAGATGTCTTCATGTG
TCTCTGCACGAATATGACCTCTACTTATTTACAATAGAGAGGTTACAATC
TATCTGTTCTTAGAAAGAAATTGTGTCCCTTCGTTTTTGAGTCACCTTAA
ATATGCTTGCTTTGGGTAAGGAAGTGCTTTTCACCTCTACGCCCCTCTAC
GCTCAACCAGTATCcgaaaaaaacaatttccaaAGATTTTTCCTTTGTAT
ATAGTGTTGTATTttataaatattattttattattaatgaaaaatttttg
tgaatattttataTTGTTGTTGATAAATCATCGACTTTTACAGAATTCGA
AATGTATGATAAAAAAATCTC
Run BLAST on NCBI

transcript from alignment at scaffold_218:393343..407774+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052576 ID=TCONS_00052576|Name=TCONS_00052576|organism=Clytia hemisphaerica|type=transcript|length=14432bp|location=Sequence derived from alignment at scaffold_218:393343..407774+ (Clytia hemisphaerica)
GGAATTTCAGATATTCAATTTAGAGGAAGCTGATAAGTTCAAAAGAGTGG
TTGCGTTAAGAAGGAAACTACGAGACTCCGGTACCAACTCTTTAACCTTT
ATTTTAACACTGGCGGTGCATCACTTTGTGAAGACATTATATTTGTTCTG
GTGCAACACGTCTCATTGCCCCCTTAAGTAAGTGATATGTCTTTCTCTAT
TCATTTTTTTAGGATCTCAAGGCTGTTCACAGTTAATCAGGTACAAcata
ttctttttataagattGATTTCATATTTGTTACCCTATCTTTGAAATTTG
AACGCCAGCCAGATAAGGGGATAGTTTCTACTTGTAATAATGATCTGTGC
TCGATTCTCTGAGGAACTTTAGGAGAGAGTAAGTTCCTTGGAAAGAGTGG
AAATTTATCGACTCCCTCTGCATGTCAAGTACAATTTGAAGTTGAGGACC
AGATATATTTTAAGAATAAAGCCAGAAAAGAATCGTCCATGTAAGCTGTA
CTAGTGACCAGTAGGCTACTAAGTCTTGCAACCCCCtctcttttttcaaa
actgactCTGTTTTTGTCTGAGTTAAAATTTCCATATACAGTTTCTTTTC
TTACTGTATAGAAAACTTTTCAGTTTAGTTTGAGTCTTGTATTGTTGTTA
TTTGTTCATGTCTGACATTTTGTCACCATCATAATTTATTGCACAGTTCA
TTGGAAATTTGGGTGAAGGACACCGAGAATATCAGGGAAAAACAGTGATT
ATTGATAAACAAAACCGTGACcgttattttgtttatttgtttgcgAGTCA
TTTTTCTTccttattgtttttgttttcagttgTTTTGTTTTCGTAAACAA
TCATTTCCGGACTTTCatcaatttatttttattacttaATCTACCAGTCg
tcgaatttcaaaatttgggtAAATTGATCAAAAGTTGACTTTTTGCTATT
TCCATGATTAAAAGGTTTGGTTAAAATACTTAAAAACTTTCATACCTAGG
ACTGGTACGAGTCGGTTTTATTCACGGAGAGTATTCCAGCAAGCCTCATT
CATTTAACCGTTAGTTGTGATGTTCACGacaaaaatgttgatatttgttg
ttgtttgtgaCCAATTGGAGGAATCCTTTCTTCTTCTTAATAATATAATC
AAGAAGACTCTATTTTCCCGAtgagatttttgtttatattaCAGTATTAC
TTGGTCCTTTAGAAGTAACTTTGTGTGATGGACAACGGCGATCTTCTTTT
AGGAACAGGTTTAAGATTGGATGCTATTTAAGGAACGCGAAATCCCATAA
TACGATAATCTCGCTAGAAGACTCTCCAAGAGAAAAAGTAAGAGCTTAAA
AAATGAATGAATCAAAGGGGCGCTTTAATTAAAATGAATGGATTTGTAAT
AAGTGAAATTACGAAAACTAAAGCACTTGTAATCTCATGACGTTGTAGCT
CACGGTATATTTATGTAGAAGAGTCTTTTTTTAAGTCATTAGAGAAAGAA
CTTTTTGGCGATTTAAAGAAGACCGTCACGATGTTGGTACGGATATCGAG
CATTGCGGTGGAAATATACGAATAGCCGGGTATTTGAAATTAACTTTCAC
ATCATTCTTTAGTGCTCGAGGAATTATATAGAATATTCGTAGGAATGAAA
CGAGCTTTCGATTAAGAGGAGCTCACTTATAGTGGGACAACACAAGAGGG
GAGCAGACACCAGACTTATAGGAGTTGAAGTTACTTGCCTCAAACTGTAA
CTTGTATGGTGAGGAAGGTTCTGTACATGGCCTTTGGGAAACCACTTTTG
CATTCTTGCTATCGTTATCGTGTATCTAGTCTGATTCGATGAGCTACAAA
TGATAGTtaatattcatttttcaaaagtttttatgcTTTTTCTTAGCAGA
AGAATTAGTATGAAGATTGATACTTTTTGCATTGCTATACtctccaaaat
gaaaaattggttCAGAGGAAAATCCAATTGTGAGACTTCTTATTCCAGGC
CAGTTCTGTTAAACTTTCACAACAccttgaattttattttcttgtgtCGA
TATCAATCAAACGGGGCGTGAGAATATCACCGTTCAGTCTTAAGTATTAT
AACTTTATGACATCACGCACGGTAAACTAAAGATGCTACTAATTTCTCAC
ACATAATGTCACCATTCATCTCAAAATAGattattgactgaattattTGA
CTCTTCTAGACCAACTTTGTTACGTCCCACGTTTTGTTTCAAGGGCCCTC
TCAAGATAACAGAATAATCATTTGTTACGTTAACGGTGACTTAACTGTCC
CTTTTTGACGTTCATTCTCTCTGTTCTATTTCCCTTCTGATTTGACATTT
TTCAGGGTTGAATTATGCTGAGTTGACCATTTCAACTCACAACATTATGT
CAAAATCTTATGACCATACTCTATGGTGCCATAGTCTTTTGTAGAGCTAT
TACCCTTTTTTCGGCATTAAGTTTATTAAGTCAGACACCCTTTAAGGGCG
GTACATACTCGTACTCTCTATTTCCCTAGTAACTCTCCGAGTTATGCATG
TGCTACtgaatgctttttgttttgaatgagAGAAATGGTTGGTCGGATAT
AAAGCGGCAATttgtttttcaaggtttttcagTACAAGAAGTGTTATAGA
CATGTACTTCAACTTTTCCTGTTTTTTCTCGTtatatgttttttcttttt
acatactCAACATTATCATAAAAAATGTCATGGCACTTTTGAacttattt
ttcttcaaaattttggaatacGTATCAAGATGGGTGACGTATTAGTTACG
TCATTATTTCCCGTTTGGCACTTAAAAGGTCGTTTATTAAGTCATAAGTA
GGAGGAGAAAAGACGAGAAAAAAATGCACATGAAATTCTTCGTTAATTAG
TATAGTCTGTATCTGGGATATGTAGTAATTTATTGTGAGATGCTCGAGCC
TTATCTGATAGAGACGTTCCTTTGTTGTGTTTTATCCGCATATTTAAAAG
CGAATGGTTGTGTGTTAAATTTTGTGGATTCTGGTATGTATAAGTATGTG
ATTCATACCATTAGGGTGGAAATTGGCTAACTCTGGTTTCATTTATCTTT
TGGAACTGATTTTATGGTGGNTACAAGTATGTGATTCATACCATTAGGGT
GGAAATTGGCTAACTCTGGTTTCATTTATCTTTTAGAACTGATTTTATGG
TGGAAAAGTTTGCGTGGATTTAAATCCATCACGACACTAACTTTGTAAAG
AGTTGGGAAATGCTATTTGAGCTTAACAGTATACATTAGGTTGATTGCGT
GTATTTTGAAATGAATAAAAGATTCTCTGAATTGAATTCTGGTATGGAAG
TATACAATATCTTTTTGACTAATTAGATTTGGTTTGTACCTTCCTTTAAT
GTCTAGACTCCATACATCTATTCTGTTCGCTCTGTTCTTACACTTCAAGA
TAAGGCAAATTAATTTGGTTACTTTGATTAGCACCGGAAAATagattttt
ctctatttttcgtGAGTGGGATGTGGGATTGACACCTTTTATAGATTAAG
AATGTTCTAAGCTGTAATATTTCCTTCTACGCACTAATTGATAGGTTTAA
GTTTCCCtataaaaactttatatttgaaattttaaatagtAGACTTACTT
AAGCTTAATTGAGGTTCCGGTGAACTTTTTTATCTTAATACCTGATGACG
TCTGCATTTTGGTTAAGTTGCCGTTCATTCCCTCCCCCTCTATTTCTGTA
GACTTCTCTGTTCATAGTCAACCCATTGATTTTGTATCTATGGAATTACT
TTCGGGTTGAACTCGATCAAAGTTAATGTTTACGTTAGTTGTATTGTTTG
TGGTAATGCTTAGCAGCTGGTTTGTTTGCAGGTGTATATGGTGGGTACAA
TCAATAATGGCTTTTAGAACAGTTTGATTTTTTCCCAAAACACCAATCAG
GCCTTACCCAAAAGGttgcatttttaatttgttaaaatttcgtcAAATGC
ACGTGTTTATGCGATGCTGGTAcattaattaaataaaaaaaaacctaatt
tttgtCTCATCTGTTGATTTTTAAGGAATCAAGCTTACTAGGAGCTTCGG
TTACGTGTTTCGGATATGTTTCTTCTTTTATTAGATATGACCTAAACTCT
GATATCTGTTTCAATGCCAGTATCTATGGTAGTTTTTCagattaaagatt
taaaatcgacattaagtcaataaaattattttccaagcTGTATTTTTGTG
GTATTTTTATGATGCATTTCACGACAATTGAAGTCAAGTATCAGTTTTGA
AGTTTTCAACTGTTTTTGGTTGAAGTGCTGTGATTTGATAAATTAAGATC
AAGGTCTGTAAAAGCAATCACTATTTCTCTTGTAATAAATTGTGTCCTCC
CACCCACATTCTAGAACAGTTAAAATGTTATATACAATTATCCTGGAATG
GATTACCGTTAGACCCCCGTTAGACCACTTCGATCTTCTTTTACCcgtct
ttttttctatttataaaaagtgaAATCTTTGCGTTGACAATTGAAATGGA
AAACTTCCATTCCTATGAATACTTATTCCAGAAGttcttgaattttgatt
ttagacTTAATTTTGGATAAGGAACCAGGGCTTGTGAAGATTGCATACTT
TTTGTTTATTGAGTTTAGTGCACTAATGTTAATATGATATAACTTTAAGA
TACAGAGGAGAGGTATAAAGTATTactttggaatttttattggcattatt
tttgattgtttgatcAAGTGACAGACAGTAAAATCATTTCACCTTTTTGT
TCATATCCATTGACAACTTGTCAACGTGCGTGTGTAGGATGTTGAAATGT
TGCTGAGAGTAAAGTAAATAGGATACAGTGTGATGAAGTTAAATGTGTGA
GCACTGTGCATTTCTGCCAAGATGAGCTCTCTGATAAACTTCTTTTGCCT
CTGAGTTTAATGTTCTAAAAAGAACTTCATCAATCAATAAATGTAAGGAA
TATACTTCAAACATGGCCATTGCTTtagtattaaatatttccctccATTT
AAAGAGAGAAATGAGTGAGAAATATTGCTAGAGTTGAACCACAAGTTTTA
GTATTGCGACTTTCTGTCCTCGGTATGGTAAACTTTTGAAGAAGGAATTT
CGTAAATTCACTGTCTATTTTTCTCGTCCAGATTCACCAAAGCGAAGGCT
GTTACTGAATTTACTTGGACAATCCATACTGTACAAAAAAGGTTTGAATA
GAGTTTCTACTCAATACTGTCAGACTGCCTGACCTATCATATCGATTAAT
AATCTGTTCCATTTACCAGACCTCACAGCGGATCCTCAGTGAGAGAATCA
TAATCcataatttcttttattttatttgatgaATGATGCCTTTGTGATTC
ATGTATAGATCCTTGCCAGTGATCAAAGATTGATTTGTTTACTTGTTTGT
ctacttaaagcttttttttgcGTACCTCATCACTTTGGAGTGTCTTTTGA
AAGTACAGTGTAGCCACTACGTTCGAGTAAGGTTCAAAAGGCAgtgttaa
aggtttttttttaataagagtgatatcgtttgcttactcatcaattttaa
tttacaagctttttcacattggattggcatggatgtggagcaagattggt
cagaaaggaggcaagaaaaacatttgtatcaatataatataacaatagac
agacactgtGCTGGTATGAACTATGTGTCTAATTATGAAACGGGAAcgct
tatgtaaaaataaaacctttaggGACTAGTAAAAATGTCTGAGTTAGAAG
ATAttcaagttatagaggttcgagttgaagagactccactgtactgTCCT
CTCTACAATTTTCGGGCCAAATCGGGTGACTGCTCAACAGAGAGTTGGGA
AAGGATATACTAAAACTTTAGCCTTTATTTAGTTCGGGCAAACGGACATC
AGTTTCATAACTTTTATCAGTGGTTTAAGATACGGTGAACTTGTAAAATG
ACCTTGATTAAGATCGCCATTCCTTGACTTCCTTTGACTTAACTTGCGAC
TTGTGTTTTCTTAGAATTCCGAAAAAGTAATATTTATGATGTGTCAAGGA
GCGGGAGTGGCGGACCGACATTAAAGAACTAGAAAGATTTGACTTAGCCG
ATATTTAAGAACAGTTAGCGTAATTTGGGCCCTGAAACAAAAATTATTGT
ATTTTGCCTATCTGATACTGCGTTGAGGTAGGTAGCCTATTTTGCTCTAG
GTTTGTATGTTTTTCTTTGGCTTTCAGGATTGAAGGTTATGTTATGTGTT
TGTTGTGCCGGATGACATGGATTGTTTAAGAGGAAAGTTTCAGGGGGAAC
GAAAATTTTCATAtaagaatgaatatttttggtatACATTCTATCAATCA
ATGAAATATGCATTTTAATTGCTTTAATTTCCTTATCATCATTTTCCAGG
GGTCAAGTGATATGAtctaattgaaaaaattgatactAGCTCCTAGCCCC
TTTATGTAGGTCACGTCTTAATATTGATTCAAATAATTTCTCATTAAAAA
TTTATCTTTGTGGAGTCTGGGTGCTAAGtttctgttatttttttctCGTA
AAGTTGAGAAAGTCACGATTTGATGTTTTgcagaaaaaagtttttaaatc
ttttgcagttttcaaaagaaacatTGTGTGTAGTATAAGTTGGCACTGCT
AttggaaagaaagaaagagatctttatttttgcaaaaaaatgttgTATTT
AGTTCAAAGGATAAGATAATATAAAGCTCTATAGCGAAATCCTATTTCGA
ATCGGGAAAATCTCTATACTACTTTGCTCCTTAGACTTTGATTATTTGAC
TCTCGGCAATGCAAAATCTTTATTATGTCTTCGCAACGACATTTGTTGGA
CCGTCAAACTCGTCAGTTTCTGGATCTTAAAAGACGTTTGAAAGATCCTG
CTTCGGCTTTAGACTATTCGGGATTATTGTTATTGGATTTTGGGTAATGC
TAAATCACGTCCGATAACATCTTTTTAACGATTGATGGTTTTGGACCGGC
AAGTCTCAGTACTTGCCGAACTCGTTGAATATCGCGGATTTCTGCTCCTT
AAAAGAACGCGTGAAAGATAGTACTGACAAGAGTCCTTATGAAAAGATTG
AAATGGGAGAACTTACTTAGACGCGTGCCTAGGCTGTTTTTATTTGAGTG
ACGTTTCAATCGTATCGTATGTTTTTGCTCTTTATTATCATTGAAAATTg
tactaaaatcaaaaaagtgtTGATTTGTATGCCAGTTTGTTTATTTAGGA
TGACACTCGTCATTGGAGGAGTTGGAGTTTTCTTTTCTATTGTCATCTGA
CAGTACTCTGCTTTCGCTCTTTTTTCCATATTCATTATTCTTAAAAACGT
TTGTCGTGTTATTTCACTGTTTTAATCTTTCGTTAAACCTTGGTGTGTGA
TGGTGGTGCTCTTTCTATATCTATGAAAAATGTCGTCTTTTTCAGTTGGT
AACGAGGAAAAAATTGCTGACTAGTCAGAAATGACGTTTTTGAATGCCGG
CTATTATTATATTGTCCAATACTAATTTACTAGTCCCCCGACAAGTCaat
attaaagtttttttgttttcccaactagttttaaatttcaaaaactttta
ttgcaagtttttttttttaatatttgtaaTCAAATAACAAGAGGCTGCTC
AAGTAGCCTAAGTAGGGAGAACATATACTTGAAAACTCCTTGAGtggctt
ttttttctttcgcgATTCTCTTCTGCGCGACTAAACCGTACTAAAAAGCA
TTGGGAATTGTCCACGATAAGACTTATTAAAACTGGACAATCAAATGCat
ttttagctggattttattagttttgaatACATTGAGGGTGTCCATTAAAA
actcttcattttatttttcgttcagGAAAATATAAGATACATGAATCAAA
TTACGAtagaagaatcatatttttgaaTGACTTTAAAACGAGGAGACACG
ATGACGATGAATTCGTTTGGAAATCACCACAATAATCATCAACAACATTC
AAACAAACAGAACACCGATACTGGACTGAGTTTGAATTTGGCCGTGGTTG
GATCGAAAGGTGCTGGAAAATCAGGTAAATTTACTCgctattttaaatat
tttcctttgaaaattatactttagtttcactttttgaaatgtgttctttt
ggaaaattcaccttttttgagatttttgtggAAATTTCCTTTCGAATAAA
TAACGTTCATGCAAACCTAAAAATCATTTACATTCGGAATTTTCATCAAA
GACTAAATTTGAGATTGTTATAACCTATGACATTAGCTTTTAGGAGATCA
GATTTTTTATAAGTAATCAACTGAAGGATTCATGCAAAAGAATTTCGAGA
ATTCTCATCGATTCgattaaatttcttttgatatgTCAGATACCGAACAT
gccatatttttccaaaattataAAACTTTGGGATAATCGCTTAATCTGAT
TGTGAGTGTATGGTATACGCCTTAGCACGATATAAAattatttcagtgaa
attagCATATCATTTTTATGTCTTTAGGTTAGAGCTGATTTGTTTCAGTA
TTATAAACCTAAATTCCTTGTTTTACTTCCCAAATTTCACACTTTctcaa
actttcacaaaaaaaggaaattaaaaGGATTAACATCAAGATCTAGCTTG
CACGAACGAActtcttttgaaacttttcaagcTTTGTTTCTTTTCTGACA
GCACCACGCAAACTTAAAGCCCTGATATTCCTTGTTCCTTATTTTCATCC
AAAACTAGAGTTAAGTAGGAAAAGAACATTTATCAACCCTAAGAGAGTTT
TACTATGAacctttttcatcaaaatcttgaaaacacGAACATTCCTTTAT
CCCCCTGTAATTCTTTTTAGATCAATACTCACGCTATTGAGGTCAAAATG
ATTTCGAAATTCTTTGGGAAATAGTTCAGTTGAGTACACAATGCAGATTA
CATTGTAACTAAGACaactatttcatttttttctaacctTATAGCAATCA
CTGTCCGCTTCTTAACGCGTCGCTTTATCGGAGAATATGCATCACAAGCA
GGTAAGATTTACTTTATTTCATGCAAATGCCCAGACATTAACTAAAAACT
GTTTCCTTGGTGTTGAATTTGTTTCCTTTCCTTTGAAATGAAGAATGGGA
AATTTCATTCAGGTTCGAATCTTTGCATTACCCTGCAATTGACGTAGTTG
ATGGATCTCttgtgaattttttgaaaactttggaaGATTTCTAGGTCATG
TCTAGTCTGCTTCTTGTTGTGAGATAGATAAATCCTAATTTTATAAATCT
GTTTTGTAGAGATTAGTCCAACAACATACAAATTTTCTTATTCAGAGGGT
TCATTCAATAATCTTTGTAGTATGTCTGAGATACAAATTTTATTAGTTTG
AATCACTTTTGACCTTTGTTTCTTCCTAATACCCCTCATACCACTTTTTC
AAACAACAACTTGCCATTCTATTTGCTTAGTGAATCTTTTGTTGACTGAT
ACTACTCTGTTtggtatatcatcaatatatttgtttttatgtcTTTTCAA
AGACCTTTTTTCTTTGATGGAAGTCAACAGAAATTGATACAGTGTTAATC
TCAATCAACAGAAATCCAAATCCTACGCTTTCTTGGCTTGCATTTTGAGA
CCTTTTGTATTANGTTCTTCAGAGGGTTCATTCAATAATCTTTGTAGTGT
GTGTGAGATACAAATTTTATTCGTTTGAATCACCCTTGACCTTTGTTTCT
TCCTAATACCCCTCATACCACTTTTTCAAACAACAACTTGCCATTCTATT
TGTTTGGTGAATCTTATGTTGACTGATACTACTCTGTTtggtatatcatc
aatatatttgtttttgtgtttttaaagACCATTTTTCTTTGATGGAAGTC
AACAGAAATTGATACAGTGTTAATCTCAATCAACAGAAGTCCAAACCCTA
CGCTTTTTCTTGGCTTGCATTCTGAGACCTTTTGTATTGAATTACATTCA
TGTGTGTTTCTTGCATCaactgtttttctttggatGACTTGTTGAAATTT
AAGTCTTTTATTATTCGTAAGGAAAGTCCCTCTGTTTATGATTCAACTCA
GAACTTTAGTCAACTGCATTCGCAATGTATTTAAACCTTTGATAACTTCT
TCAATTAACTCATCTTTCCTAGAATAATAACCGAATATTTGCTTTTTAAT
AAGGAAAAATTTGCTTCGATATGAAACTCTGAAACTAGTACACAATGATA
ACAGCTTTTATTTGTCTTGGGAAATATCTCACTCAGTTGTCTGTCCATGC
CTGTCaattcttgtttttatttccCGATTAATCCGATTTTCAATTTCCGG
AATGGATATGAAGTCTGTTTCCGATGCACTTTAAATGTGGTTCTCTTATC
TTGTGTTGGTTTTTTAttatcttgaaaatttcttgatcatcgaaaatata
aattttagaaCAATTACACTTTTCACTTTCCTTGAGTTTCAATTTTAACC
TCTTAGACTACCCTAGAACCCTTACATCGGTTTCCTGATAGAGCAACGAT
TGTGAAAGAAGTCAAACGGCTCGTGTCTACTCAGAAAATATTGGTTTATT
TATAAACTTATGCAAGTCTTACTTCAACCCtcataaaatcaagaaaaata
tgACCTTGAAGTACAAAATTCAACTTTCATTTTGCATAAGAAAGCTGCAT
GAAACCGCGTCATTTATTACGTAAATAGTTCAAGGGGATAGGACCTTTTT
CTGTTTTAACTGTTTGGGTCTATAATTGTCACCTAAGTGCCATGTTAACA
TTGTAGATTATAATATTAATCGTAAGCCTTACTTATTAACATGATTGAAG
GTCATCAAGGATTGAATTTCCTGAAAGATAACAAGTTTTTGTTAGTTTTC
TTTCGATAATGCAGTAGTCTTACATTTGGTGCAAATCAAACAATCTTGAA
TTTCAACCTTCCCTGAAAACATCTAGGGTTCATTTGAAATTACATAAAGC
TACCGTAACTTTGAAACATCATTGTAATTAAAAGCTACTATTCTAAATCA
ACGGCAATTAAACCTAATTTAAGACGCACAATTGAGGAAGCCATTTAAAC
TGTGGGCTTTCTATCAGAGAAATATTCGATTCCAAGAATCTTTAGTTTCG
ATTCACTCACTGAAACCTGTAGCTTTGAACTAACACTTTCTCTCTCTCTT
TGCAGATGTATGCATCAATCGTAATATCGACGTCGCTGGTCGTATTGCAG
ATGTTCACGTTAAAGACACCAATGCTTGCGTAAGTTGGTTTGATTTAAAC
TTGCAATGTCACCGCTTTAGGGTCTGGTACAAAAATGGTATATGTTTGAT
AACACACTAACACACTAAAAATTTGCAGTACCTTACAGGGTAGACCCAAA
TATGCAATGTAAATAATCTACAAGTTTTTTGCAAAGATACTTTTGAGATA
TCACTTTTCTATAAAAGCTCTCCAAGTcaaacttttaagaaaaatgcTTA
TTACAAAAATGGAAGGCTAGGTTTTTTTCTTGGATAGTGCCCAAGCCTCA
AATATAACCACTATCGTTTCGCACTTGAAATAAAATCGGCGCGTGGACCT
CTTCAGAATCTCGNAATCAAACAATCTCGAATTTCAACCTTCCCTGAAAA
CATCTAGGGTTCGTTTGGAATTACATTAAGCTACCGTAACTTTGAAACAT
CCTTGTAATTAAAAGCTACTATTCTAAATCAACGGCAATTAAACCTAATT
TAAGGCGCACAATTGAGGAAGCCATTTAAACTGTGGGCTTTCTATCAGAG
AACTATTCGATTCCAAGAATCTTTAGTTTCGATTCACTCACTGAAACCTG
TAGCTTTGAACTAACACTTTCTCTCTTTCTTTACAGATGTATGCATCAAT
CGTAATATCGACGTCGCTGGTCGTATTGCAGATGTTCATGTTAAAGACAC
CAATGCTTGCGTAAGTTAGTTTGATTTAAACTTGCAATGTCACCGCTTTA
GGGTCTGGTACAAAAATGGTATATGTTTGATAACACACTAACACACTAAA
AATTTGCAGTACCTTACAGGGTAGACCCAAATATGCAATGTAAATAATCT
ACAAGTTTTTGCAAAGATACTTTTGAGATATCACTTTTCTATAAAAGCTC
TCCAAGTCAAACTTTTAAGAAATGTTCGTTTAAAAAATGCTTATTACAAA
AATGGAAGGCTAGGTTTTTTCTTGGATAGTGCCCAAGCCTCAAATATAAC
CACTATCGTTTCGCACTTGAAATAAAATCGGCGCGTGGACCTCTTCAAAA
TCTCAAATAGAACCCttgaaaaaccgtttttctacTAGTACAAACTTGTT
CATCAAAATTATTGCAACCTGACACCCGGCTTTGCGTCACTGTGCACATA
ATCTCTTTCTCAAGGAGTATGTTGTCAAACTGTCTTGAGTACTAAAGGAT
GTTAAGTCATGTTGACCACTTTATCCCTGTCGGAAATGAAATCGTTATCT
CCCTAGTTTTTTGTTATGTGATGTCATGAAATGTAAACACGTGGGCTCGT
TAAGTACTAGTCTCAAGAACTTTGACCACCCCATTTGGCAACTAAAAGGG
ATGATACCTATTTTTAAGATggattttgatgttatttagACACATAATGA
AAAGCTATTTGCTGCCAGGTTGAAGTAATCATTTTAGAAAAGGGGTGGAG
ATTTTAAACAATCTGCTAAAGTAATTAatacaaaactctaaaaaattCCT
TAAGGAATCCTAAAAAGACTAAAAAGACCAGCATTATATTAACTTCTCTC
AATCTTTATTACTGATTTGAAAACCTTACTATTAATAACGGATGTTTTAA
GTGTATGATTCTGTGATTCTAAATTTCCTTTGCCCTTGTTCATTTACAGG
ATTGGTTAAAAGGTCCGTCAGCATTAATTGGTTGGTCGACGGCTATCGCT
ATCATTTATTCCGTCACCGATAAGAAAAGCTTCGAACTCGCTACTTATAT
ATTAAGTCAATTAAACATCACTAAAAGACTAGAAGCTGATAATGTATTAC
TATTAGCCAACAAATGCGACTTAGAACATCTCCGACAAGTGAGTCGTGAT
AAGGGAAAAGAACTAGCCATGAAGTACGGTACACAATTTTACGAAACATC
CGCAGCGAACGATTTAAACGGCGTACAGCATGCTTTCGAACGGTTACTAT
TCTCAGCTTTATCCAGTCAAGAATGTAAAGTACAATTTAATAATTATACT
GAACAAACGTTTCCGGTACAGCAACGGAAGTGCAATCGAGTGCAGCGTGA
CTTCAGACGTGACAATAGTGCACGTTCTAATAAACAATTACGTCGTATGT
CGACGGGTTCGCATAGCTCTTCAGTCGATACAATGTCTACGATATCGGAT
GATGATCGCTTTTACGCTTTTAATATAGACTCTTCACATTCATCGACCTT
CTCCACACCCGATCAATCACCGACGACGTCGCCCGTCCCATCTGCTGGAC
GACGAAAAATTTCGTTACCAGTCTTGTTAGAGAAAATGGGTCTGACGTCA
TCTTCATCTTCCAATCATCAACATTCGAGCCGTAAAGTTTCAATGGCTCC
AAGAATAAGGTGACGGTAAAGAGAAAGAAAGTTGCACAAGAAGATCTAAC
GACAAGGAGtaatttttgacagattttggTGACCACGAGAAGGTGGAAAT
GCTTGGAGATTTCAATAAATGGTTGAGGCATTCGAATCAGAAATATAACC
AACAACTTGGAACCCATATGTGTGCGGAACACAAAAACTGATAAATGGAT
CTTCAAATCAGAGGAAAGAAAACACGTTATAAAGAACAAGGTACAATTGT
TAGGCTTGTCAAGACAATGTGGAGGCTATCATATACCTGTTTTTAGAATT
TACCTCATAAAGACGTTAAAATGTCTTGAAATTGACTTTAAGAATTTTAA
GAATTCATGCAATGTGTACCATTTCTCCTTGTGACCGACACCTCGCCACT
ATTGAGTTGATCAGGAGATTTACAGGAAGTGACAAGTTTCAATGCTAGAT
GTCTTCATGTGTCTCTGCACGAATATGACCTCTACTTATTTACAATAGAG
AGGTTACAATCTATCTGTTCTTAGAAAGAAATTGTGTCCCTTCGTTTTTG
AGTCACCTTAAATATGCTTGCTTTGGGTAAGGAAGTGCTTTTCACCTCTA
CGCCCCTCTACGCTCAACCAGTATCcgaaaaaaacaatttccaaAGATTT
TTCCTTTGTATATAGTGTTGTATTttataaatattattttattattaatg
aaaaatttttgtgaatattttataTTGTTGTTGATAAATCATCGACTTTT
ACAGAATTCGAAATGTATGATAAAAAAATCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033245XLOC_033245Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052576-exon-scaffold_218-1491911889:393343..393422TCONS_00052576-exon-scaffold_218-1491911889:393343..393422Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1510915933:393343..393422TCONS_00052576-exon-scaffold_218-1510915933:393343..393422Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1575043694:393343..393422TCONS_00052576-exon-scaffold_218-1575043694:393343..393422Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1491911889:393555..393582TCONS_00052576-exon-scaffold_218-1491911889:393555..393582Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1510915933:393555..393582TCONS_00052576-exon-scaffold_218-1510915933:393555..393582Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1575043694:393555..393582TCONS_00052576-exon-scaffold_218-1575043694:393555..393582Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1491911889:401268..401466TCONS_00052576-exon-scaffold_218-1491911889:401268..401466Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1510915933:401268..401466TCONS_00052576-exon-scaffold_218-1510915933:401268..401466Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1575043694:401268..401466TCONS_00052576-exon-scaffold_218-1575043694:401268..401466Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1491911889:402387..402443TCONS_00052576-exon-scaffold_218-1491911889:402387..402443Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1510915933:402387..402443TCONS_00052576-exon-scaffold_218-1510915933:402387..402443Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1575043694:402387..402443TCONS_00052576-exon-scaffold_218-1575043694:402387..402443Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1491911889:404598..404671TCONS_00052576-exon-scaffold_218-1491911889:404598..404671Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1510915933:404598..404671TCONS_00052576-exon-scaffold_218-1510915933:404598..404671Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1575043694:404598..404671TCONS_00052576-exon-scaffold_218-1575043694:404598..404671Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1491911889:406292..407774TCONS_00052576-exon-scaffold_218-1491911889:406292..407774Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1510915933:406292..407774TCONS_00052576-exon-scaffold_218-1510915933:406292..407774Clytia hemisphaericaexon
TCONS_00052576-exon-scaffold_218-1575043694:406292..407774TCONS_00052576-exon-scaffold_218-1575043694:406292..407774Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:393343..407774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0207721	0	0	0	0	0	0	0	0	0	0.0159409	0.0293203	0.081471	0.0199012	0	0.211814	0.154598	0	0	0	0.132104	0	0.0571155	0	0	0.179252	0	0.734302	0
Blast
[Close]
BLAST of TCONS_00052576 vs. Swiss-Prot (Human)
Match: RSLBB (Ras-like protein family member 11B OS=Homo sapiens GN=RASL11B PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.570e-26
Identity = 62/167 (37.13%), Postives = 95/167 (56.89%), Query Frame = 1 
Query:  265 LNLAVVGSKGAGKSAITVRFLTRRFIGEYASQADVCINRNIDVAGRIADVHVKDT-------NACDWLKGPSALIGWSTAIAIIYSVTDKKSFELATYI---LSQLNITKRLEADNVLLLANKCDLEHLRQVSRDKGKELAMKYGTQFYETSAANDLNGVQHAFERL 735
            + +AVVG+ G GK+A+ VRFLT+RFIG+Y   A     R + + G    + V+DT       N+    +  +  I W+ A+ I++S+TD KS+EL + +   + QL++  RL    V+++ANK DL H++QV    G +LA   G  FYE S + + N V  AF  L
Sbjct:   34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLP---VVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVL 197
The following BLAST results are available for this feature:
BLAST of TCONS_00052576 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSLBB1.570e-2637.13Ras-like protein family member 11B OS=Homo sapiens... [more]
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