TCONS_00052580 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052580
Unique NameTCONS_00052580
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1847

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052580 ID=TCONS_00052580|Name=TCONS_00052580|organism=Clytia hemisphaerica|type=transcript|length=1847bp
AATTTACTTGGACAATCCATACTGTACAAAAAAGGAAAATATAAGATACA
TGAATCAAATTACGAtagaagaatcatatttttgaaTGACTTTAAAACGA
GGAGACACGATGACGATGAATTCGTTTGGAAATCACCACAATAATCATCA
ACAACATTCAAACAAACAGAACACCGATACTGGACTGAGTTTGAATTTGG
CCGTGGTTGGATCGAAAGGTGCTGGAAAATCAGCAATCACTGTCCGCTTC
TTAACGCGTCGCTTTATCGGAGAATATGCATCACAAGCAGATGTATGCAT
CAATCGTAATATCGACGTCGCTGGTCGTATTGCAGATGTTCACGTTAAAG
ACACCAATGCTTGCGATTGGTTAAAAGGTCCGTCAGCATTAATTGGTTGG
TCGACGGCTATCGCTATCATTTATTCCGTCACCGATAAGAAAAGCTTCGA
ACTCGCTACTTATATATTAAGTCAATTAAACATCACTAAAAGACTAGAAG
CTGATAATGTATTACTATTAGCCAACAAATGCGACTTAGAACATCTCCGA
CAAGTGAGTCGTGATAAGGGAAAAGAACTAGCCATGAAGTACGGTACACA
ATTTTACGAAACATCCGCAGCGAACGATTTAAACGGCGTACAGCATGCTT
TCGAACGGTTACTATTCTCAGCTTTATCCAGTCAAGAATGTAAAGTACAA
TTTAATAATTATACTGAACAAACGTTTCCGGTACAGCAACGGAAGTGCAA
TCGAGTGCAGCGTGACTTCAGACGTGACAATAGTGCACGTTCTAATAAAC
AATTACGTCGTATGTCGACGGGTTCGCATAGCTCTTCAGTCGATACAATG
TCTACGATATCGGATGATGATCGCTTTTACGCTTTTAATATAGACTCTTC
ACATTCATCGACCTTCTCCACACCCGATCAATCACCGACGACGTCGCCCG
TCCCATCTGCTGGACGACGAAAAATTTCGTTACCAGTCTTGTTAGAGAAA
ATGGGTCTGACGTCATCTTCATCTTCCAATCATCAACATTCGAGCCGTAA
AGTTTCAATGGCTCCAAGAATAAGGTGACGGTAAAGAGAAAGAAAGTTGC
ACAAGAAGATCTAACGACAAGGAGtaatttttgacagattttggTGACCA
CGAGAAGGTGGAAATGCTTGGAGATTTCAATAAATGGTTGAGGCATTCGA
ATCAGAAATATAACCAACAACTTGGAACCCATATGTGTGCGGAACACAAA
AACTGATAAATGGATCTTCAAATCAGAGGAAAGAAAACACGTTATAAAGA
ACAAGGTACAATTGTTAGGCTTGTCAAGACAATGTGGAGGCTATCATATA
CCTGTTTTTAGAATTTACCTCATAAAGACGTTAAAATGTCTTGAAATTGA
CTTTAAGAATTTTAAGAATTCATGCAATGTGTACCATTTCTCCTTGTGAC
CGACACCTCGCCACTATTGAGTTGATCAGGAGATTTACAGGAAGTGACAA
GTTTCAATGCTAGATGTCTTCATGTGTCTCTGCACGAATATGACCTCTAC
TTATTTACAATAGAGAGGTTACAATCTATCTGTTCTTAGAAAGAAATTGT
GTCCCTTCGTTTTTGAGTCACCTTAAATATGCTTGCTTTGGGTAAGGAAG
TGCTTTTCACCTCTACGCCCCTCTACGCTCAACCAGTATCcgaaaaaaac
aatttccaaAGATTTTTCCTTTGTATATAGTGTTGTATTttataaatatt
attttattattaatgaaaaatttttgtgaatattttataTTGTTGTTGAT
AAATCATCGACTTTTACAGAATTCGAAATGTATGATAAAAAAATCTC
Run BLAST on NCBI

transcript from alignment at scaffold_218:398550..407774+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052580 ID=TCONS_00052580|Name=TCONS_00052580|organism=Clytia hemisphaerica|type=transcript|length=9225bp|location=Sequence derived from alignment at scaffold_218:398550..407774+ (Clytia hemisphaerica)
AATTTACTTGGACAATCCATACTGTACAAAAAAGGTTTGAATAGAGTTTC
TACTCAATACTGTCAGACTGCCTGACCTATCATATCGATTAATAATCTGT
TCCATTTACCAGACCTCACAGCGGATCCTCAGTGAGAGAATCATAATCca
taatttcttttattttatttgatgaATGATGCCTTTGTGATTCATGTATA
GATCCTTGCCAGTGATCAAAGATTGATTTGTTTACTTGTTTGTctactta
aagcttttttttgcGTACCTCATCACTTTGGAGTGTCTTTTGAAAGTACA
GTGTAGCCACTACGTTCGAGTAAGGTTCAAAAGGCAgtgttaaaggtttt
tttttaataagagtgatatcgtttgcttactcatcaattttaatttacaa
gctttttcacattggattggcatggatgtggagcaagattggtcagaaag
gaggcaagaaaaacatttgtatcaatataatataacaatagacagacact
gtGCTGGTATGAACTATGTGTCTAATTATGAAACGGGAAcgcttatgtaa
aaataaaacctttaggGACTAGTAAAAATGTCTGAGTTAGAAGATAttca
agttatagaggttcgagttgaagagactccactgtactgTCCTCTCTACA
ATTTTCGGGCCAAATCGGGTGACTGCTCAACAGAGAGTTGGGAAAGGATA
TACTAAAACTTTAGCCTTTATTTAGTTCGGGCAAACGGACATCAGTTTCA
TAACTTTTATCAGTGGTTTAAGATACGGTGAACTTGTAAAATGACCTTGA
TTAAGATCGCCATTCCTTGACTTCCTTTGACTTAACTTGCGACTTGTGTT
TTCTTAGAATTCCGAAAAAGTAATATTTATGATGTGTCAAGGAGCGGGAG
TGGCGGACCGACATTAAAGAACTAGAAAGATTTGACTTAGCCGATATTTA
AGAACAGTTAGCGTAATTTGGGCCCTGAAACAAAAATTATTGTATTTTGC
CTATCTGATACTGCGTTGAGGTAGGTAGCCTATTTTGCTCTAGGTTTGTA
TGTTTTTCTTTGGCTTTCAGGATTGAAGGTTATGTTATGTGTTTGTTGTG
CCGGATGACATGGATTGTTTAAGAGGAAAGTTTCAGGGGGAACGAAAATT
TTCATAtaagaatgaatatttttggtatACATTCTATCAATCAATGAAAT
ATGCATTTTAATTGCTTTAATTTCCTTATCATCATTTTCCAGGGGTCAAG
TGATATGAtctaattgaaaaaattgatactAGCTCCTAGCCCCTTTATGT
AGGTCACGTCTTAATATTGATTCAAATAATTTCTCATTAAAAATTTATCT
TTGTGGAGTCTGGGTGCTAAGtttctgttatttttttctCGTAAAGTTGA
GAAAGTCACGATTTGATGTTTTgcagaaaaaagtttttaaatcttttgca
gttttcaaaagaaacatTGTGTGTAGTATAAGTTGGCACTGCTAttggaa
agaaagaaagagatctttatttttgcaaaaaaatgttgTATTTAGTTCAA
AGGATAAGATAATATAAAGCTCTATAGCGAAATCCTATTTCGAATCGGGA
AAATCTCTATACTACTTTGCTCCTTAGACTTTGATTATTTGACTCTCGGC
AATGCAAAATCTTTATTATGTCTTCGCAACGACATTTGTTGGACCGTCAA
ACTCGTCAGTTTCTGGATCTTAAAAGACGTTTGAAAGATCCTGCTTCGGC
TTTAGACTATTCGGGATTATTGTTATTGGATTTTGGGTAATGCTAAATCA
CGTCCGATAACATCTTTTTAACGATTGATGGTTTTGGACCGGCAAGTCTC
AGTACTTGCCGAACTCGTTGAATATCGCGGATTTCTGCTCCTTAAAAGAA
CGCGTGAAAGATAGTACTGACAAGAGTCCTTATGAAAAGATTGAAATGGG
AGAACTTACTTAGACGCGTGCCTAGGCTGTTTTTATTTGAGTGACGTTTC
AATCGTATCGTATGTTTTTGCTCTTTATTATCATTGAAAATTgtactaaa
atcaaaaaagtgtTGATTTGTATGCCAGTTTGTTTATTTAGGATGACACT
CGTCATTGGAGGAGTTGGAGTTTTCTTTTCTATTGTCATCTGACAGTACT
CTGCTTTCGCTCTTTTTTCCATATTCATTATTCTTAAAAACGTTTGTCGT
GTTATTTCACTGTTTTAATCTTTCGTTAAACCTTGGTGTGTGATGGTGGT
GCTCTTTCTATATCTATGAAAAATGTCGTCTTTTTCAGTTGGTAACGAGG
AAAAAATTGCTGACTAGTCAGAAATGACGTTTTTGAATGCCGGCTATTAT
TATATTGTCCAATACTAATTTACTAGTCCCCCGACAAGTCaatattaaag
tttttttgttttcccaactagttttaaatttcaaaaacttttattgcaag
tttttttttttaatatttgtaaTCAAATAACAAGAGGCTGCTCAAGTAGC
CTAAGTAGGGAGAACATATACTTGAAAACTCCTTGAGtggcttttttttc
tttcgcgATTCTCTTCTGCGCGACTAAACCGTACTAAAAAGCATTGGGAA
TTGTCCACGATAAGACTTATTAAAACTGGACAATCAAATGCatttttagc
tggattttattagttttgaatACATTGAGGGTGTCCATTAAAAactcttc
attttatttttcgttcagGAAAATATAAGATACATGAATCAAATTACGAt
agaagaatcatatttttgaaTGACTTTAAAACGAGGAGACACGATGACGA
TGAATTCGTTTGGAAATCACCACAATAATCATCAACAACATTCAAACAAA
CAGAACACCGATACTGGACTGAGTTTGAATTTGGCCGTGGTTGGATCGAA
AGGTGCTGGAAAATCAGGTAAATTTACTCgctattttaaatattttcctt
tgaaaattatactttagtttcactttttgaaatgtgttcttttggaaaat
tcaccttttttgagatttttgtggAAATTTCCTTTCGAATAAATAACGTT
CATGCAAACCTAAAAATCATTTACATTCGGAATTTTCATCAAAGACTAAA
TTTGAGATTGTTATAACCTATGACATTAGCTTTTAGGAGATCAGATTTTT
TATAAGTAATCAACTGAAGGATTCATGCAAAAGAATTTCGAGAATTCTCA
TCGATTCgattaaatttcttttgatatgTCAGATACCGAACATgccatat
ttttccaaaattataAAACTTTGGGATAATCGCTTAATCTGATTGTGAGT
GTATGGTATACGCCTTAGCACGATATAAAattatttcagtgaaattagCA
TATCATTTTTATGTCTTTAGGTTAGAGCTGATTTGTTTCAGTATTATAAA
CCTAAATTCCTTGTTTTACTTCCCAAATTTCACACTTTctcaaactttca
caaaaaaaggaaattaaaaGGATTAACATCAAGATCTAGCTTGCACGAAC
GAActtcttttgaaacttttcaagcTTTGTTTCTTTTCTGACAGCACCAC
GCAAACTTAAAGCCCTGATATTCCTTGTTCCTTATTTTCATCCAAAACTA
GAGTTAAGTAGGAAAAGAACATTTATCAACCCTAAGAGAGTTTTACTATG
AacctttttcatcaaaatcttgaaaacacGAACATTCCTTTATCCCCCTG
TAATTCTTTTTAGATCAATACTCACGCTATTGAGGTCAAAATGATTTCGA
AATTCTTTGGGAAATAGTTCAGTTGAGTACACAATGCAGATTACATTGTA
ACTAAGACaactatttcatttttttctaacctTATAGCAATCACTGTCCG
CTTCTTAACGCGTCGCTTTATCGGAGAATATGCATCACAAGCAGGTAAGA
TTTACTTTATTTCATGCAAATGCCCAGACATTAACTAAAAACTGTTTCCT
TGGTGTTGAATTTGTTTCCTTTCCTTTGAAATGAAGAATGGGAAATTTCA
TTCAGGTTCGAATCTTTGCATTACCCTGCAATTGACGTAGTTGATGGATC
TCttgtgaattttttgaaaactttggaaGATTTCTAGGTCATGTCTAGTC
TGCTTCTTGTTGTGAGATAGATAAATCCTAATTTTATAAATCTGTTTTGT
AGAGATTAGTCCAACAACATACAAATTTTCTTATTCAGAGGGTTCATTCA
ATAATCTTTGTAGTATGTCTGAGATACAAATTTTATTAGTTTGAATCACT
TTTGACCTTTGTTTCTTCCTAATACCCCTCATACCACTTTTTCAAACAAC
AACTTGCCATTCTATTTGCTTAGTGAATCTTTTGTTGACTGATACTACTC
TGTTtggtatatcatcaatatatttgtttttatgtcTTTTCAAAGACCTT
TTTTCTTTGATGGAAGTCAACAGAAATTGATACAGTGTTAATCTCAATCA
ACAGAAATCCAAATCCTACGCTTTCTTGGCTTGCATTTTGAGACCTTTTG
TATTANGTTCTTCAGAGGGTTCATTCAATAATCTTTGTAGTGTGTGTGAG
ATACAAATTTTATTCGTTTGAATCACCCTTGACCTTTGTTTCTTCCTAAT
ACCCCTCATACCACTTTTTCAAACAACAACTTGCCATTCTATTTGTTTGG
TGAATCTTATGTTGACTGATACTACTCTGTTtggtatatcatcaatatat
ttgtttttgtgtttttaaagACCATTTTTCTTTGATGGAAGTCAACAGAA
ATTGATACAGTGTTAATCTCAATCAACAGAAGTCCAAACCCTACGCTTTT
TCTTGGCTTGCATTCTGAGACCTTTTGTATTGAATTACATTCATGTGTGT
TTCTTGCATCaactgtttttctttggatGACTTGTTGAAATTTAAGTCTT
TTATTATTCGTAAGGAAAGTCCCTCTGTTTATGATTCAACTCAGAACTTT
AGTCAACTGCATTCGCAATGTATTTAAACCTTTGATAACTTCTTCAATTA
ACTCATCTTTCCTAGAATAATAACCGAATATTTGCTTTTTAATAAGGAAA
AATTTGCTTCGATATGAAACTCTGAAACTAGTACACAATGATAACAGCTT
TTATTTGTCTTGGGAAATATCTCACTCAGTTGTCTGTCCATGCCTGTCaa
ttcttgtttttatttccCGATTAATCCGATTTTCAATTTCCGGAATGGAT
ATGAAGTCTGTTTCCGATGCACTTTAAATGTGGTTCTCTTATCTTGTGTT
GGTTTTTTAttatcttgaaaatttcttgatcatcgaaaatataaatttta
gaaCAATTACACTTTTCACTTTCCTTGAGTTTCAATTTTAACCTCTTAGA
CTACCCTAGAACCCTTACATCGGTTTCCTGATAGAGCAACGATTGTGAAA
GAAGTCAAACGGCTCGTGTCTACTCAGAAAATATTGGTTTATTTATAAAC
TTATGCAAGTCTTACTTCAACCCtcataaaatcaagaaaaatatgACCTT
GAAGTACAAAATTCAACTTTCATTTTGCATAAGAAAGCTGCATGAAACCG
CGTCATTTATTACGTAAATAGTTCAAGGGGATAGGACCTTTTTCTGTTTT
AACTGTTTGGGTCTATAATTGTCACCTAAGTGCCATGTTAACATTGTAGA
TTATAATATTAATCGTAAGCCTTACTTATTAACATGATTGAAGGTCATCA
AGGATTGAATTTCCTGAAAGATAACAAGTTTTTGTTAGTTTTCTTTCGAT
AATGCAGTAGTCTTACATTTGGTGCAAATCAAACAATCTTGAATTTCAAC
CTTCCCTGAAAACATCTAGGGTTCATTTGAAATTACATAAAGCTACCGTA
ACTTTGAAACATCATTGTAATTAAAAGCTACTATTCTAAATCAACGGCAA
TTAAACCTAATTTAAGACGCACAATTGAGGAAGCCATTTAAACTGTGGGC
TTTCTATCAGAGAAATATTCGATTCCAAGAATCTTTAGTTTCGATTCACT
CACTGAAACCTGTAGCTTTGAACTAACACTTTCTCTCTCTCTTTGCAGAT
GTATGCATCAATCGTAATATCGACGTCGCTGGTCGTATTGCAGATGTTCA
CGTTAAAGACACCAATGCTTGCGTAAGTTGGTTTGATTTAAACTTGCAAT
GTCACCGCTTTAGGGTCTGGTACAAAAATGGTATATGTTTGATAACACAC
TAACACACTAAAAATTTGCAGTACCTTACAGGGTAGACCCAAATATGCAA
TGTAAATAATCTACAAGTTTTTTGCAAAGATACTTTTGAGATATCACTTT
TCTATAAAAGCTCTCCAAGTcaaacttttaagaaaaatgcTTATTACAAA
AATGGAAGGCTAGGTTTTTTTCTTGGATAGTGCCCAAGCCTCAAATATAA
CCACTATCGTTTCGCACTTGAAATAAAATCGGCGCGTGGACCTCTTCAGA
ATCTCGNAATCAAACAATCTCGAATTTCAACCTTCCCTGAAAACATCTAG
GGTTCGTTTGGAATTACATTAAGCTACCGTAACTTTGAAACATCCTTGTA
ATTAAAAGCTACTATTCTAAATCAACGGCAATTAAACCTAATTTAAGGCG
CACAATTGAGGAAGCCATTTAAACTGTGGGCTTTCTATCAGAGAACTATT
CGATTCCAAGAATCTTTAGTTTCGATTCACTCACTGAAACCTGTAGCTTT
GAACTAACACTTTCTCTCTTTCTTTACAGATGTATGCATCAATCGTAATA
TCGACGTCGCTGGTCGTATTGCAGATGTTCATGTTAAAGACACCAATGCT
TGCGTAAGTTAGTTTGATTTAAACTTGCAATGTCACCGCTTTAGGGTCTG
GTACAAAAATGGTATATGTTTGATAACACACTAACACACTAAAAATTTGC
AGTACCTTACAGGGTAGACCCAAATATGCAATGTAAATAATCTACAAGTT
TTTGCAAAGATACTTTTGAGATATCACTTTTCTATAAAAGCTCTCCAAGT
CAAACTTTTAAGAAATGTTCGTTTAAAAAATGCTTATTACAAAAATGGAA
GGCTAGGTTTTTTCTTGGATAGTGCCCAAGCCTCAAATATAACCACTATC
GTTTCGCACTTGAAATAAAATCGGCGCGTGGACCTCTTCAAAATCTCAAA
TAGAACCCttgaaaaaccgtttttctacTAGTACAAACTTGTTCATCAAA
ATTATTGCAACCTGACACCCGGCTTTGCGTCACTGTGCACATAATCTCTT
TCTCAAGGAGTATGTTGTCAAACTGTCTTGAGTACTAAAGGATGTTAAGT
CATGTTGACCACTTTATCCCTGTCGGAAATGAAATCGTTATCTCCCTAGT
TTTTTGTTATGTGATGTCATGAAATGTAAACACGTGGGCTCGTTAAGTAC
TAGTCTCAAGAACTTTGACCACCCCATTTGGCAACTAAAAGGGATGATAC
CTATTTTTAAGATggattttgatgttatttagACACATAATGAAAAGCTA
TTTGCTGCCAGGTTGAAGTAATCATTTTAGAAAAGGGGTGGAGATTTTAA
ACAATCTGCTAAAGTAATTAatacaaaactctaaaaaattCCTTAAGGAA
TCCTAAAAAGACTAAAAAGACCAGCATTATATTAACTTCTCTCAATCTTT
ATTACTGATTTGAAAACCTTACTATTAATAACGGATGTTTTAAGTGTATG
ATTCTGTGATTCTAAATTTCCTTTGCCCTTGTTCATTTACAGGATTGGTT
AAAAGGTCCGTCAGCATTAATTGGTTGGTCGACGGCTATCGCTATCATTT
ATTCCGTCACCGATAAGAAAAGCTTCGAACTCGCTACTTATATATTAAGT
CAATTAAACATCACTAAAAGACTAGAAGCTGATAATGTATTACTATTAGC
CAACAAATGCGACTTAGAACATCTCCGACAAGTGAGTCGTGATAAGGGAA
AAGAACTAGCCATGAAGTACGGTACACAATTTTACGAAACATCCGCAGCG
AACGATTTAAACGGCGTACAGCATGCTTTCGAACGGTTACTATTCTCAGC
TTTATCCAGTCAAGAATGTAAAGTACAATTTAATAATTATACTGAACAAA
CGTTTCCGGTACAGCAACGGAAGTGCAATCGAGTGCAGCGTGACTTCAGA
CGTGACAATAGTGCACGTTCTAATAAACAATTACGTCGTATGTCGACGGG
TTCGCATAGCTCTTCAGTCGATACAATGTCTACGATATCGGATGATGATC
GCTTTTACGCTTTTAATATAGACTCTTCACATTCATCGACCTTCTCCACA
CCCGATCAATCACCGACGACGTCGCCCGTCCCATCTGCTGGACGACGAAA
AATTTCGTTACCAGTCTTGTTAGAGAAAATGGGTCTGACGTCATCTTCAT
CTTCCAATCATCAACATTCGAGCCGTAAAGTTTCAATGGCTCCAAGAATA
AGGTGACGGTAAAGAGAAAGAAAGTTGCACAAGAAGATCTAACGACAAGG
AGtaatttttgacagattttggTGACCACGAGAAGGTGGAAATGCTTGGA
GATTTCAATAAATGGTTGAGGCATTCGAATCAGAAATATAACCAACAACT
TGGAACCCATATGTGTGCGGAACACAAAAACTGATAAATGGATCTTCAAA
TCAGAGGAAAGAAAACACGTTATAAAGAACAAGGTACAATTGTTAGGCTT
GTCAAGACAATGTGGAGGCTATCATATACCTGTTTTTAGAATTTACCTCA
TAAAGACGTTAAAATGTCTTGAAATTGACTTTAAGAATTTTAAGAATTCA
TGCAATGTGTACCATTTCTCCTTGTGACCGACACCTCGCCACTATTGAGT
TGATCAGGAGATTTACAGGAAGTGACAAGTTTCAATGCTAGATGTCTTCA
TGTGTCTCTGCACGAATATGACCTCTACTTATTTACAATAGAGAGGTTAC
AATCTATCTGTTCTTAGAAAGAAATTGTGTCCCTTCGTTTTTGAGTCACC
TTAAATATGCTTGCTTTGGGTAAGGAAGTGCTTTTCACCTCTACGCCCCT
CTACGCTCAACCAGTATCcgaaaaaaacaatttccaaAGATTTTTCCTTT
GTATATAGTGTTGTATTttataaatattattttattattaatgaaaaatt
tttgtgaatattttataTTGTTGTTGATAAATCATCGACTTTTACAGAAT
TCGAAATGTATGATAAAAAAATCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033245XLOC_033245Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052580-exon-scaffold_218-1491911889:398550..398583TCONS_00052580-exon-scaffold_218-1491911889:398550..398583Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1510915933:398550..398583TCONS_00052580-exon-scaffold_218-1510915933:398550..398583Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1575043694:398550..398583TCONS_00052580-exon-scaffold_218-1575043694:398550..398583Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1491911889:401268..401466TCONS_00052580-exon-scaffold_218-1491911889:401268..401466Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1510915933:401268..401466TCONS_00052580-exon-scaffold_218-1510915933:401268..401466Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1575043694:401268..401466TCONS_00052580-exon-scaffold_218-1575043694:401268..401466Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1491911889:402387..402443TCONS_00052580-exon-scaffold_218-1491911889:402387..402443Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1510915933:402387..402443TCONS_00052580-exon-scaffold_218-1510915933:402387..402443Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1575043694:402387..402443TCONS_00052580-exon-scaffold_218-1575043694:402387..402443Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1491911889:404598..404671TCONS_00052580-exon-scaffold_218-1491911889:404598..404671Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1510915933:404598..404671TCONS_00052580-exon-scaffold_218-1510915933:404598..404671Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1575043694:404598..404671TCONS_00052580-exon-scaffold_218-1575043694:404598..404671Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1491911889:406292..407774TCONS_00052580-exon-scaffold_218-1491911889:406292..407774Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1510915933:406292..407774TCONS_00052580-exon-scaffold_218-1510915933:406292..407774Clytia hemisphaericaexon
TCONS_00052580-exon-scaffold_218-1575043694:406292..407774TCONS_00052580-exon-scaffold_218-1575043694:406292..407774Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:398550..407774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0.0322652	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.69225e-06	0
Blast
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BLAST of TCONS_00052580 vs. Swiss-Prot (Human)
Match: RSLBB (Ras-like protein family member 11B OS=Homo sapiens GN=RASL11B PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.354e-26
Identity = 62/167 (37.13%), Postives = 95/167 (56.89%), Query Frame = 2 
Query:  191 LNLAVVGSKGAGKSAITVRFLTRRFIGEYASQADVCINRNIDVAGRIADVHVKDT-------NACDWLKGPSALIGWSTAIAIIYSVTDKKSFELATYI---LSQLNITKRLEADNVLLLANKCDLEHLRQVSRDKGKELAMKYGTQFYETSAANDLNGVQHAFERL 661
            + +AVVG+ G GK+A+ VRFLT+RFIG+Y   A     R + + G    + V+DT       N+    +  +  I W+ A+ I++S+TD KS+EL + +   + QL++  RL    V+++ANK DL H++QV    G +LA   G  FYE S + + N V  AF  L
Sbjct:   34 VKIAVVGASGVGKTALVVRFLTKRFIGDYERNAGNLYTRQVQIEGETLALQVQDTPGIQVHENSLSCSEQLNRCIRWADAVVIVFSITDYKSYELISQLHQHVQQLHLGTRLP---VVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVSVSENYNDVYSAFHVL 197
The following BLAST results are available for this feature:
BLAST of TCONS_00052580 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RSLBB1.354e-2637.13Ras-like protein family member 11B OS=Homo sapiens... [more]
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