TCONS_00052592 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052592
Unique Name	TCONS_00052592
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1252

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_218:557083..573003+
coding sequence from alignment at scaffold_218:557083..573003+

transcript sequence

>TCONS_00052592 ID=TCONS_00052592|Name=TCONS_00052592|organism=Clytia hemisphaerica|type=transcript|length=1252bp
CAAAATATGTTGAATGAGTGGGTTTCTCATTTCCGGACCTGTTTTTAAAA
CAGAGGATTTCTATCATAGTTTTGCACAACAGTTTTACCTATTTGATTGA
GGGTCATATGTTTTCGTCAAATCAGATGACTTGTTTCAATGTGGTGTCGT
GACTTGGCAATGACCAACATGATTCATCCAATATCATCAAAGAGCAGATG
AGAGTGCACAAGGATGAAATATGTGGGAAGACAATCTGATTCTTGACTAT
CTGATGTTATTCAATCTCTACCTGGCTTTTAACAATGGAGAGACAATTGA
AAGACAATCCACTGGCTCACCATCAAGACATTGTTTATCACATAAAACAA
TCACAATTATTTCTGATGGTGTTATAAGCAATACAATTCAGTATGGACTT
GAAGGCTTGGTTTACCATTTGAGGGGTATGATCGAACAAGAACCTTGCTA
CACGTTTTACGTCTACTTATCAAGAGAGCAACGTTTCATGAAATGGACTC
ACAAAGATGAGGCTTTTCAAAATCGAATTGAGAATAATAACCTGATTCTT
TTGTCACCAAATGAGACTCTACAAGTCATCAAAAAATATGGAGAGTTAAT
AACTACTTTGCGTTCGGCAAAACAGACTTTGGTTTATTTTGCATTATCTG
ATCTCTATAAAAGAAATCAGGGTGTATTTGACAGTTTACGCAATCTTCAG
GTTGACGACAATGTTGAGGTGGTTGTAATATGTGTTGTTGCTACATGCCC
GACTCAAGGCGAAGAATGGATACCATTTTATCGGATATTACCATATGAAA
ACACCCAAAGTTCACAAACCACCATGCAGTTGTATCGAAATCTGAAAGAC
TTATTAAAGAATCCGAATTTCAACCGATATGAATATATGAGAACAGTCGA
TTTACTGCCAGAACTGGTGATCAATCCTGAATGTGTCAAAGACATCAATT
TCATTCATATCGCCATGGACAAAATCACTGACCCATTCTTACCAATGGCA
TTGAAGTTCATTGAACAAGAAAACATTCATCGTCAAAAAGCCAATCTGCA
ACCACTGGCAATCGTCTTCCAATGCTCCTTTGTAGAAAAGGAGAGCTTAG
AGTTCTGGGGATACTATTTTCATCGAATCAGAGAACACTATACGATTTAT
CCTGGTATTTTAGTATCCAGTCTTCCCGAGTCGCCTATTCTAGGCACAAC
ATATGTTTACAAGGCGTACAACCAAGTAAAAAATACTCGTTTTTATATTT
CG

Run BLAST on NCBI

protein sequence of TCONS_00052592-protein

>TCONS_00052592-protein ID=TCONS_00052592-protein|Name=TCONS_00052592-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
MWEDNLILDYLMLFNLYLAFNNGETIERQSTGSPSRHCLSHKTITIISDG
VISNTIQYGLEGLVYHLRGMIEQEPCYTFYVYLSREQRFMKWTHKDEAFQ
NRIENNNLILLSPNETLQVIKKYGELITTLRSAKQTLVYFALSDLYKRNQ
GVFDSLRNLQVDDNVEVVVICVVATCPTQGEEWIPFYRILPYENTQSSQT
TMQLYRNLKDLLKNPNFNRYEYMRTVDLLPELVINPECVKDINFIHIAMD
KITDPFLPMALKFIEQENIHRQKANLQPLAIVFQCSFVEKESLEFWGYYF
HRIREHYTIYPGILVSSLPESPILGTTYVYKAYNQVKNTRFYIS

Run BLAST on NCBI

transcript from alignment at scaffold_218:557083..573003+

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052592 ID=TCONS_00052592|Name=TCONS_00052592|organism=Clytia hemisphaerica|type=transcript|length=15921bp|location=Sequence derived from alignment at scaffold_218:557083..573003+ (Clytia hemisphaerica)
CAAAATATGTTGAATGAGTGGGTTTCTCATTTCCGGACCTGTTTTTAAAA
CAGAGGATTTCTATCATAGTTTTGCACAACAGTTTTACCTATTTGATTGA
GGTAATTCCACACTCCTATCTAaggtattttatattttcatagcTAGTCT
AGATACCATAGCTCTAAACTCTGGTAAAATACGCATGAGATACGTACAGA
TTACGAAATGCGTAATTTTTATATCCAATGTACATTTTTCTTGTTCCGCT
GGAGGTTTAAGAGaatttaagccttaaaattcaTAAGTTCAGACTTACTT
CATCCCTGTATTCCCTTGTGGTGTGTATTTTTCATGATTCATTTACCGTA
GGGTCATATGTTTTCGTCAAATCAGATGACTTGTTTCAATGTGGTGTCGT
GACTTGGCAATGACCAACATGATTCATCCAATATCATCAAAGAGCAGATG
AGGTACTCAAATTTCAGATCTCGATTTATTAACTTTGTTTTAATAAACGG
CTCCAAACCTCCCGTCCTCAAAAACAGCCTGGCCTGAATTTTTACAGAAA
TGGTAGGTAGGTAGGGtttcaaatcacgcaatcatcacgcaaaaaaaact
CTAAATCACGATCTCGTTTATCACGTTGGCTCCTCCGATCATGCAATCGc
gcactttttttttttttttttttttttttttttttttttttNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttatgtatatgttatgtat
ataaatgtatataaaattctaCGATTCAAACTGATACGAAGTGGACAGCT
AAATCATTAATGGAAGCTTAGTGGGCTGGTTGGCTACATAGTATAGAAAT
AGTAAATGAATGGGCAACCTAATATAGAAGACGCTGAAAAATAGGTTCGT
CGGATAAGATGATATAGANNATATAAAATGCTAGAACAATgttttagata
aaataaaataaatattaacataaaataaatatatcaaaaggGGAACGCTA
GAATCGCTGGTGGGCTAGAAAACACAAGAAGAGTGAGTCTAAATATATAG
CAAgtgattgaaaataaatgacCTTAGAAAATAGACTAGGCTGCAAATGC
TAAAGACTACACGtcttaaatcacgaaatcacttgaaaaacgccaatcac
gccatcagGCTTGTTTATAGCCTGCTTTTTCATTTGACTCCATCCAAGAC
ATATTGCATAATATCCAGCCTGAAAAATGCTCTGACCTTCTTTGAAAATG
ACATTCGTAGTGATTGCAGTTGACTCTCTCGCTCTCTCTTTTCAACtttt
ataattcgaatatttcggtaattcgaactaaaatattggtctcTCAGCTG
GAAAGTTGTATTAAATATTGCGTATACTTCGTTAAAGCTCGACCTTTAGG
AGCTTTTGCCATGAGcatgactttttgagttttaagcttaataATATTCT
TAGCATGCTctttttttcactatttttgagcatttttgcccCTTTTTCTA
AGAAACTGACTGTTTTAGAGTCggcaaagccttatgttcttatatagttt
gttcttataaaaaaaacgtgtatgagtAAGACATGTATGATTCATAGAAA
GAAGGTGGCAAgtagtttgttttgttggtttcNATATTTCGGTAATTCGA
TCTAAAATATTGGTCTCTCAGCTGTAAAGTTGTATTAAATATTGTGTATA
CTTCGTTAAAGCTCGACCTTTAGGAGCTTTTGCCATGAGCAtgacttttt
tagttttaagcttaataatattcttagcatgttctttttttcaccatttt
tgagcatttttgcccCTTATTCTAAGAAACTGACTGTTTTAGAGTCggca
aagccttatgttcttatatagtttgttcttataaaaaaacgtgtatgagt
AAGACATGTATGATTCATAGAAAGAAGGTGGCAagtagtttgttttgttt
tgtttacttcTTTTGAAGCATCTAAACCTTTCTATTGAGTAATATTATTG
CAAAAAAGTAAGTACTCGTCaaagtttgaaagaaaatatgatGTCATATT
CATCACTCGCGCACCCGGTTgaccaaacctttttaacaacttttgaTATG
CTACAACCCCTTCTCAcggacccactgggaccccttccagtggaaaatta
tccgcCATTttttccccactgaaaataatcaaataaaccaatcctacTGC
AAAATATCTACTATTTTtcctatccccactgaattttctgatttgaaaac
aaaataattgaaatccctAGACTTGagaaattttatccccactggttgAA
AAAATTCTGCCGGGTCTGTGAGCAGGGGGTGTTATAATTAATGGtttttt
tcatgatatttggacagcgtgaaaatgaaatttgtgaTAGAGTTTTGTCA
TTACAGATAAGGTCATTGCTACCTGATGACGTTATCAGACTTTGACAGAT
CCGATATTAGGACTCTCTCTGTAACGCCtttttaagttgtaatttttttg
ctcaaattttgtgcACTAACTTCATGATAAAATACAGGTGCGAGTAAACG
TTCAATTACCACCTATAAAATATTTAGGTCTATATTTTCAACCTTTAGAA
TAAGAATAACTTCTTTACACTTTTGAAATTGTATTGTCTTTTGATAAATG
TCAAGTCAGGCTAAAAGATTCAACCATTTAATTATACCTTTCGAGAATTA
GTTATTGTTGGCATGGCATTGAAAATGACACGACTGTCTTATTCTCAGAG
AAAGCgattcatttgaaaaaatactcaTACTGATAAACAAAATGTGTGGT
CACTCACGAGAACACTCTAGTTTTTGAGTTAGATGTCtgttttgtacaaa
aatttacTACAATCAAACAAGTTAAAGAAGGCGAGTGTCTCCAGTACAGA
CTTCTTGAGAGTGGAAACTGTATATTATAATTTATTACTTTCTTAAGATG
GGAAATTATGACAAGTTTTCTCAAACAGTTCAAAAGATCTTTTAAAATCA
TATCTTTTAGCCTGTAATTTTGGCGTATAATTTTTGTATgctcgaaaaaa
aacatttttctactGAGAAAACCTTTCCTTGCTATCTTTACGATAATTTA
ATGTTACTctgaatatttttatcaatcGAACTTCCTTGTCAACCTTTTTA
AGGCTGGACCATATTTTTGGTCTTCCACCGGCAGTGTAGAAGGTTGTCGG
TGTCTACTtaaggccggcgtaaaaagggtcgATACGGcaccaaaaaaatt
caaattaccGAGATACTTTAGAGCGGATGGGAGCTCGTAAAGAAAGTATA
TTTGGTCTTGCCTTAAAATATTCGGCGGTAGCAGGATTTACTAAGATGAC
CTTAAAAAGTAAAATGCAACAACATCtaaaattaaacttttaaaaaccaC
ATACTCAGTTATGATGCTGTATCTCAATGGTTTGATGGCGCTTGTGGTAA
CCACCAATAAccttaaaaagttcaaaatcctTGCATTGTCGTGTGGTGAT
TCTGCTACGTTTGCTAAACTTTCTCATTCTCGGGAAAACATTCCTCGTTC
ATTACTGCGATCTTTCAACTGTTTTCCTGGAAatactgaaaaaatctttt
ttaaagacCGTCTTGGCTCCGTAATCTGTCCAGGTTGGAGGACCGCTTCA
GTGGCGTTTCAAAGGGGTTCAAAATTTATACTGGGGACTCTTCATCTATT
TCCTTAGACGATTTTTTTGTTCGTTACAgggatagtaaaggcgggaaaat
caATAAGCGCAGAGTTTACAGCCGTTATGGGGTATACAGAAAAAAAATCG
GTGGTAGATTTTAGAAGAAGTTAaaactggcaaactctaccaaCTGCTCT
CTGGCATAAAACCtatttgcgaattttcttcagttttggctttttcttag
atagtgatttatCTCAGACTAGCAAAGTCTactatttcctaggaaattaT
TTCCTCGTAAATTTGAAGCCCTCTCTCTCCCTTCAGATCTATAACTACGC
TTTGACCTTGTTCATAAAGTTTCTTTTCAGTTTAGTCATGTCATGTGAGG
AGAATCGGGTATCAtgctctgatacaagagtgccGGGAGATATATCTGAC
TCTGTGGTGTGGGTGCTAATACCTGTCAGGTTCGACACGCGAGGATGCAT
TTTCCTACCAACTTCCGAGTTGGTAGAGTCAGGTAAGCGCACTGATTTCC
TTAGGATAGTGAATACTGTTTCGTTTATTGGAAGGCTCATAGCTCCCATA
GCAGTGTTCGTTAAATACAGATAAAATGATCAATATCTGTAATTTTGACG
AAGTTCATTATCCATAAAATGTTTGTTCATTAGAGTGATAGCTCATGTAT
ATCATTTCCAGGTGTAATTGCGTCACTTGCTTGGTTTCTGTACATTTTCT
TTTTGACTCTTTCTCTCATTTCCATCAAACGTTGCTCTTTATATTTTGTT
CCGGGTACAATAGCATACTGATAGCTTTTTTCCCGTAGATCAGAAATCAC
ATGACAAAAGTATTGATAACAATGGTTAAGTTTTGATACAGCTccttttc
aacaattttgtttGTTTCCAATGGCAAACATCACTGTTAACATAATAATA
GATACAAATGAAGCACTCAACAAAGCCATTCGATCGTCCATAACACTTGG
TATATGTCACCCACGAAATGCTTGAATGAAACAAGCGAGCTGTATCACCA
TGATTAACGGATTTACATATCCGGACCTGCAATGAAAGTAAATGCCATGA
CATTCAAATGGATTCTGGAAACTTGCAGACATCAGAGCTCAGAGACCGTC
ACGACTGGAGATTCTTtttcaagataaaaaaacatttgCTGTGATAAAAT
CACCAAGACATGCATTAATGGATCATCCAAAAATGGATTGAAATAGAGTT
ATTTAGATAACTTCAGGATAAACTGAAGATTGAGAGTCCCACTTGGGAAG
TTGGACAGTGCATTTTGATGAGAaatacaattaaaatgctacgaaAAATG
ATTTAATGGTTAAAGGAGAGTGAAAAATAATACCATTACTGCTGACAAGG
CTTGAACATACAAAATTAGGGAAAGTTGGTCGGTTTTTTTTcaagtgtct
ataataattctaTGGGTGAACGAAAAAGAATGTCGAACAAATGAAGTCAT
TCGGGCCGGTATATGAGTGTAGAAACAAATACTAAAGGTTCGAAAATGTC
TTTTGCTGGACTCGTCACTCCATATTTTGGATCTACAAGAATATCGATAA
CTAAAGCTATCAAAATCATCCATCCATCAATATCTGTACCTGGGAATTCT
CCTTTTCAACGTTCGATGATTGAGTTTAGAGAATCTTAGATTAAACTGTC
CCAAATTTGGCTGTATGTGTTTACATCTTCTTTTGCTCTTGGTGTAACGT
AAGTTTCAATATTTGACaaagaaaaatccaaatttgccaaatttgtcAAA
CTAGCATTCGATTggttaaaaagaagaaacataAGCCACCATAAAATTGT
CATTGttggattgtttttttttcctgaaATATTAATTAAAAAAGTCAAAG
GAGTAACCATATCaaacaaagtgaatttttttcctCATCATTCACTTGAA
TCCGGGAGATTTGAAAAGACTCTAAATGTTAAAGATATTTggccaagaaa
aaaaaaaagcaacTGATACTATTCCATATATACAATTCAGATATATAAAA
CAGATATTATATTCCAAAAATAACACAGCTATTAGCCTGTTATACCATCT
TCAAAGAAGTGATAAGATTTtacaaattctttaaaatgttttttagtGAC
CTCTACTATCGTGGGAACCACAttttaattttctctgaatGTTAACCTGT
AGAGACGGACAATAAGAATTTTATCACACATGTCTCGATCACATTGCTAt
tcaaagaatcaaagatgagaAGATCATTGATCCAGGGGCTGGATCCGCAA
CTCCTGAATGGAAGATGAAGCAATTTTTCAATATagagaagtgtatttct
caggcctattgacctctatgaaacaatcttacatctttacaatttataga
tcttatcattccattcgttTATCAGTTCTAGTTTGAAATTCTCTGCGGAC
GGTGCATTTGCAACATTGGTTCCAAAACCGTTCCACGTATCAATGCTCCT
GCAGTAAAGTGAATTCGTTTGGTATCCTCTAATGCCGGTGGTAATGCAGG
TCGATTTCGATGAACGAGTTTCTGACATAGGGAATGTTTATCATAGACAT
TAAGATGCTTTTAAAATTCCACCATATCTCCGATTTTACACTGGATCTTA
AGGGTTCATGACTTGTAAACGTTCTTCGTATGAATGGTTTCTACCGACAA
GTCTTGTTGCTCTACGTTGGACACTTGCATCAGAGTGTTTGATCAGCTGT
GGAGACCAAACTGCTTGTGCGTGATCAAAGTGAGGTCTTACAAATGCTAT
GAAAAGTGTGCAAAGCATCTCGGGAGGAAGGACGTCGAGGCTTATGTTAA
TCAATCCAACGATTGAGTTAGCCTCCTTGATGTTGGTGTAGATATGCTCT
TCGAAATTCAGTTCACTATCGATAATCATTCCGACAGTTCTAGGACAGAG
CCAGCTAGATCTCGTCTTACATGTCGCATGTTCCAGAATTTCCCTAGTGT
CAACAACCAGTCATATTGGTAACGATCGGACAAAACtcctttcaaccaat
caagtaCCATTCCTCTGATACCATACGCTTCGAGTTTTCTTAGCAATCTG
CGATGTGGAACGTTGTCAAAGGCTTTTTTGTCACTGTCGATCGCTTTCCC
ATAAACCCATGTTGTTGGGTTGATAGCAATTTCTCATTCGTGAGGTGTTC
AATTATTTGTTCCTTTAGGATTCTTTCCATTGCTCTACACGCAACTGGTG
TTAGACTAAATGGGCCTGTAATTTTCTGCACGGTTCATTTTTCCTTTCTT
GTAGATCGCGGACACATGTCAGTCTTCCAATCATCCGGCAGTTTACTTTC
TACTAAGGCCTTGGACATAATAGAATGGTAAAGGAACGGCTATATAAAAG
ACCCGTTTTTCAGCATGACTGGATGAATCTTTTCAGGTCCTAGCGATTTA
TTAGGATTCAAAACTTTCAGTCCATTTCTTAACATGCTACGTTTGTTTAT
GTTCGTGATGGAAACTCAGTGATCCAGCAGGTTCATTCGTAAAACACTGC
AAAACTGATCCTGTAGAATGTCAGCTTTGTCTTCGTCAGTAAAACGAAGT
GATAATTTATCATTTGGATCAAGCAAAAGGGGGAAAATCCCCGATTTGGT
CTTCACTTAGTTCCGGATATGCTGTTCCGATATAAACTTCTTCGGGCTTC
TTTTTGCTTGAACACAAATTCGTTTTTAtagtcttcttctttctcgcTTG
ATCTTTCCTGTAACCTTGTTTCTCGCAGTAGTGTAAATAGCTCTGTTTct
ctaccgtgaaaagcacatgccgaaatcatattctgacctgtgccgaccaa
tcgagattctattcagcaaccaatcaacgcagagaaaagtgaCCATGACG
ACAAttcaagatcttggattaagttcaaattaagttaaaagttgatattt
ttattcttgtcgttgaaaacacaactcagaaatagtttttttgtaaagat
attttttagaaaagaatCGGgttcaagctggagtttttacaagttctttg
atgactctgttggtcgttaaatgttgagacaaacgattttattacttttt
ctaaagaacgcatcatccctattgtttaaaaataaccaatcagttaagca
tctcCAAGGCATCTGAAGAATCGGCGATAGCAGAGAAATGAAAAGTgata
gaaaaacagcttcttgagaACGATAGAAATACGGCTCGCCAAATACCATT
TCGATAATCAGAGAAACGCTGTTCTATCCCTTTCCATTTCTCTTGTGATG
GAGAGTCATAACATAACgatctgtctattatttcgcttccattgaagtaa
cattaccataaTTATAATAGTTGAGTatttactgttatacatttggaaAT
CATGTAGGagatttcttttaaaagaaactcatttcgattacacttggagg
tttttgGGGAATTCGGTAATAGTAAAcggcatactgatacagtctgctag
acatacAAATATGGttatatttgctcttcatctttgattttttctacagt
gattagattaaCACATgcgcaataaaatttctataattaGTCGTCAGAGG
TTGATTTATTCTTTGGAAACTCCGATACTCAGGGTACTATTTCTCTGCTA
TTTCTTATCCTTTTGCGATGAAGGCGACGTTTTCTTTTAGGCTTTGTTAA
ATGTCTTGGTCGATTGCAAAACTTCCTTTTTTTCCGTAAACATGTTTTCC
CTTCGTACGAGGAACGTACCGATTCCTAAGCTCGAATTTTATCTCGCAAC
ATCTTCCAGCAATCATTAACGTTTGCATTTTCTGCTCCTTGATAGAAACC
TGTAACCCAAACAGAGTTCTCAAGATGTCCTTTCATTGCTTTAAAATTTG
CCTTATTGTagttttaaccctttaagtgccacggtcattttgttctaagt
tttttaaagaaaatcgctagttcaaactttaaagactTATTTCTCCGGAT
CTaaaaggagttagaagcttgttcatagctcgttggatagcttagagagC
GATTTAGAAAGGGCGGGGTGGACGGCggctaaggggggggggggggggNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNagcttaaaatctcgctgaaaagactca
cttttgattctttttttgcttgaacCCAATCCAGTTAAACTAGGCATTAC
AGGAGGGTTTCGCTCTCCTTCATAGCCTATGACCAATATACTTGTCATTG
GAACTTAAAGAGTTAATGCATTCTGTTTCAAGATAACATTCGAACGAAAA
TGATAGAATAATGTGATCACTTTAATTAATTAAGTGGTGAAAGATAGGAG
ATGCTAACCTGGCTTTCTTCTTTTGTCAGAATCAGGTGTTGGGTAAAAGA
AGGAGTCTCTTAAAGCTTCGAGAAATTGTTCGTTTTCCTTCGTGTCGTGG
TGAGGATTTGACCTATTTTCCCAATTGATATCTTTATAGTTGAAGTCTCC
AACGATACACTTGTGACTGTATTTCTTATTCATTGCAATTTCCTTAAGTg
ttgcattgttttttttatgttgaCGTGTTGGTTGGATTCCGTTACATACA
TCCGAAAAGCAAAGAATCCGCTCCTTTAAGCATGCCATTAGAAACATCAG
AAAATGACGAAGACATCTCCAACACGAACAGAGGCTTTCATGCCCGCGTG
AAAGGAAGTGATAACACCAAACTGGTTTAAAGAAATACCAAATTTAGATT
AAGAATTTTCCAGAGAGCGGTTCTATTGAGTGTCTTGTAGGCTTTAGTAA
AATCAATGAAGATTATATAGAGGTTGTTGTTTAGTTCACGCGCTTGTTCT
TGTATTTGTCGCAATACAAATATAATACCGACTGTACTTTTACCAGCACG
AAAGCCTCATTGAGATTCATGATTTGCAGAGAGAAACGCATGTGTAACTG
TCCTGTTTAAAATGACTGTAGTGAGGATTTTATCAGCTTGCACCGGAGGA
GTATGGTTACTAGGTTTTCGAAATGAcgcctgatttttgaaaatcggagg
aaaaattgaaattttgtgaGATTTAGGACCCTTACCAGGacttttttcct
aaaatttagCATATTTTAGGGATACATATTGGAGTTTTTGGTTTCTTAGT
AACACTTAGCGGGACTGACATAAGATATTatgatttttacgaccctttcT
GCAGATTTTTCTAACAGGGATTGACATTCATTTGAGTAAATAGAAGTTCA
CGGAAACTCTCGTATAGTCTTGCATTAAGTTGACCTTGATTTGCGATCGT
ATTTAGGCGTAACCTGTTAGACGAAaccgttttttttaattttggtttgt
ACTGGCTAATTTGGGCGTGNTGACCTATTTTCCCAATTGATATCTTTATA
GTTGAAGTCTCCAACGATACACTTGTGACTGTATTTCTTATTCATTGCAA
TTTCCTTAAGTgttgcattgttttttttatgttgaCGTGTTGGTTGGATT
CCGTTACATACATCCGAAAAGCAAAGAATCCGCTCCTTTAAGCATGCCAT
TAGAAACATCAGAAAATGACGAAGACATCTCCAACACGAACAGAGGCTTT
CATGCCCGCGTGAANaatggcaaatttcgcggaatttaatttcgcgaatg
agccgatttcaaaagtttcacggaatttaatttcgcgattgagaagaagt
tatcaacttagattaactaTTAAGCATCGTGGAGTTGTTTGTATTTGTTT
CTATTTGATacaaaatacacgttataacgcttaaaataatcaattgtgtc
catcttttttggtaatacctggtcaaaaacagcaaaataaaagaagaagg
aaaaaaattgaatttcgcggtatttaatttcgcgatttaacaattttggt
gtgtttcgcggaatttaatttcgcgaattacgcccaaattcgcgaaatta
aattccgcgaaacacatcaaaattgttaaatcgcgaaattaaattccgcg
aaaatttcttccgcgaaaatttcttctcgcgaaaattactTCCCTTAAGG
TACGTTCAGCTTCTTACGTTGTGGcgcgttttttgtttttcttgaaactg
AGCTTGATGAAAAGTATTCAGAAAAAAGTAGACGATGGTCAGACCAAGAT
TTTGAGGTAAATAGATAGGCATAATTTTGTAATGTACACATCAGATTTAT
TTATTACTGATGATCCAGAGGGCGAATTACCAGATTTCCCTACACGAACA
GAAAAGAAGATTACTCGTCACCGAGGAGATGATGAAGAACCAGATTAAAC
TGCTTGACAAAAATATGTTGACACTGCCAACACTGCTGGGCTTTTACgcc
gcttaggctttcttgtaTAAATTTCGAACacaatttttcgagtgatttag
cCCTCGCCTCAACCAAAATTTGGCATTCTGTGGAACCATTTAGCGTTGCT
GGGGGAATTATTGGAAATTTAATGGTAGGATGGCATGCTTAGGTTCAGtt
tccaaattccatgatgccgttattcttaattttttagccaatttcatcat
aaatattctcaTAGAGTATCTTCTTATAAGAAAGTGTACCCCCAGcaccc
tggggctaatagggtaaAAAGTCACTGAGGTAAGCGTCCTCCTCCACGGG
acgagctggagtttttataagatttcaCTAATTGGTAAATATTACAATCT
GGAACATTCTTACTCCAACAAAAATGATCTACAGGGGAagctccaattag
cggacaccatcggggaaaagGTTTAGTGTCCGCTGATTAGAAGTACCCGC
CTTTTAAAAACCTTCAATTTTCTGTGCTCTAATTTTGTATAGGGTATTAT
TATTAGGGGGttaagtatttaattttttggTCCGAGGTGCTTTCCTAGAG
ACACTTGAATATGGAAGAACAAGAGACCTATTATTCAAATGtaacaattt
agtttttatgaatCATAGTAATCTTGAGGTCcctaaaatttatcattttt
atgagGTAAGCAAATTCGCCGACTAGATAAACAGAGTGCTCCAAAACGTT
TATaagcaatttttttcaatgaagatttgaagtgtttaaaaaataaatag
tttggataaatcaatcttgtctattttttttttgaagtctgTGACCAATT
TAACCGTcgatgtccgctaattagagggtTCGCttattgagtgtccgcct
tttggaaacttttATGAGAATTTGACTGGTAAATGAACGGGGAAAATAAA
ATTGACGGCTAATCAGAGGCGTCCACCTTTTAGAGTGTCTGTTAATTGGA
GGTTTTACTTTatgctgaaatattttttaaataagttcCTTCGTTATCCT
TGATGCTTCTATATTAGCTATAGGCTTTTTCAAGCTAAATGGAGTGGCAG
TTTTATTTTATTGGTCTTTTTATAAATAGTCAAATTCTCACGTCAAATCT
CAGAAATCGTCAAAAGAATCTTAACATGTGATCAAAAGGGATAAGATTCT
ATATAAGGATTTCTCATGTTTTTCCAAGTCAATAATTAGTCTTATGTTCA
CCACATGGCGACTCAAAAAGATAGACTAAGGAAATAACAACGTTTCGATT
CTAACGTTTTTTAATACAGAGGGAACATTTCAAATTGTGTACTGCCCCGC
CCGTATTTTGAAAACTTCATTAATTTTGTAAAAGAACTTCTCCATGATCT
TTGGGAcatatttttaaggaaaaataagtttttaagATCTATTAAGTAAA
GTCATAGAATACATAATGGgtgtatttttctgaatttttaaaTCATAGAA
GGGTGATCAATTTATCAAAACAGAGGTGTTTTGTCCCTAAGGGANttaaa
tttttaaatcataGAAGGGTGATCAATTTATCAAAACAGAGGTGTTTTGT
CCCTACTTTTAAAGTTACTAGGAGTGGAATCAAGGAGTTGAATGGGAATG
GAAAATCTCCTATTGCATTCATTCTATTGAATTCTATTGCAGTGTTTGTA
TAAACCCATTTCAGGATATTCTTTCTAAAGGGAAATTTCGGGCCGTTTTA
TCCAAAATGGAGCTGTAATACTGTGGGTGTACTGACTGCcagtgttttca
aaaaaagactttgCTTTGACGAAAAACAACAGAGAAAAGTCAATTAAGAA
ACTAATAACGACCGTGTCGATGTTTCCTtttaatgaaaatgcttcctctT
AGCTCATGGCACATTACAAGTGCTTTGAATTGATATCCAaatatcttgaa
atattttcatttctatttttcatttgttttgttATCTAAGTGCATTAGTC
TGTCTTAATATAATCTGCAGCAGAGACAAATacggctataacttttgata
gaattcaaattatatagcggttttgtgctcgttaaataGATATTCCGGAG
TGGAATATCATCATTCAAAATAATGGgataatgaagatgaaaagagaaga
gaagaagaagatcaactGTTTGTAGAATAATGCTATAATCTTTATTTTCT
CAGCAAATCTTCGATCTTAAAACGTCATAAATGcgaaggaaaaaaattca
aaagattttttcaatcaaaaaatacagTTCAAAAATTATCCCTGGTTAAC
TTTGAAAAAGGGCTTATTTTTGAtggtttatatttgataaattgttttat
taaattttgtcaCATTGATGATGTTTTAAAATCTAAGAACCTTGAAAAAA
TTAATCATGTGAAAATGATTATTATAGCACATTTATTGGAGAATTTGATA
tctcttcttcatcttcaatcttcattttccggtattttcatattttttct
ttctgatGATATTCCCCCCctatttatcttttcaacaagcacaaaaccgc
tatctaattcgaatcaaaagccttttttgtctccgctcaAGATTACATTG
AAACAgactttaactttttattttccacttgttcttttttcaataaatgt
ttttaaatcgtTACAGATTATATTATTGctgaaatgataattttgaatTG
TAACTCTTTTATATCACGTCAGTTTTTCTGACTCTGTGCATAAATTAAGA
AACGCCATGGTCGCGGAAAAGATATAGCCGTTTATTATGTCATTGTTCGA
CTGGTTATTAAGTGCTTTGTTGAAattatttgatctttttttaaagtaat
ttcCATACTATTTTGCCAGAGTGCACAAGGATGAAATATGTGGGAAGACA
ATCTGATTCTTGACTATCTGATGTTATTCAATCTCTACCTGGCTTTTAAC
AATGGAGAGACAATTGAAAGACAATCCACTGGCTCACCATCAAGACATTG
TTTATCACATAAAACAATCACAATTATTTCTGATGGTGTTATAAGCAATA
CAATTCAGTATGGACTTGAAGGCTTGGTTTACCATTTGAGGGGTATGATC
GAACAAGAACCTTGCTACACGTTTTACGTCTACTTATCAAGAGAGCAACG
TTTCATGAAATGGACTCACAAAGATGAGGCTTTTCAAAATCGAATTGAGA
ATAATAACCTGATTCTTTTGTCACCAAATGAGACTCTACAAGTCATCAAA
AAATATGGAGAGTTAATAACTACTTTGCGTTCGGCAAAACAGACTTTGGT
TTATTTTGCATTATCTGATCTCTATAAAAGAAATCAGGGTGTATTTGACA
GTTTACGCAATCTTCAGGTTGACGACAATGTTGAGGTGGTTGTAATATGT
GTTGTTGCTACATGCCCGACTCAAGGCGAAGAATGGATACCATTTTATCG
GATATTACCATATGAAAACACCCAAAGGTTAGATTTTGTATTAAAAGATA
GATTTTGTATTAAAGGATATGAAATTGTTGgctaaaacaagcaaaatgaa
aatagcaaaaattgACCCACTTCACATGGTTTTTTAtctagaaaagtaaa
aaatactgAGCACAGAATATCGAATCTTAAATTCTACGTTACTCGAaact
atctttccaacggtTAATAACTTATCATAGCATAAATGTTTgttaaaaat
cattcaaaagtGTTTCGAATCTTTGAGTAAAGCCTTTTGTAGTATGGTCC
CCATTCCATCAGACCATAAAGAACTGGATCGTTTCACTTTTATGCGTTTT
ATTTTTCCTCTTATTTCTCATCATCATAGTTCACAAACCACCATGCAGTT
GTATCGAAATCTGAAAGACTTATTAAAGAATCCGAATTTCAACCGATATG
AATATATGAGAACAGTCGATTTACTGCCAGAACTGGTGATCAATCCTGAA
TGTGTCAAAGACATCAATTTCATTCATATCGCCATGGACAAAATCACTGA
CCCATTCTTACCAATGGCATTGAAGTTCATTGAACAAGAAAACATTCATC
GTCAAAAAGCCAATCTGCAACCACTGGCAATCGTCTTCCAATGCTCCTTT
GTAGAAAAGGAGAGCTTAGAGTTCTGGGGATACTATTTTCATCGAATCAG
AGAACACTATACGATTTATCCTGGTATTTTAGTATCCAGTCTTCCCGAGT
CGCCTATTCTAGGCACAACATATGTTTACAAGGCGTACAACCAAGTAAAA
AATACTCGTTTTTATATTTCG

Coding sequence (CDS) from alignment at scaffold_218:557083..573003+

>TCONS_00052592 ID=TCONS_00052592|Name=TCONS_00052592|organism=Clytia hemisphaerica|type=CDS|length=2064bp|location=Sequence derived from alignment at scaffold_218:557083..573003+ (Clytia hemisphaerica)
ATGTGGGAAGACAATCTGATTCTTGACTATCTGATGTTATTCAATCTCTA
CCTGGCTTTTAACAATGGAGAGACAATTGAAAGACAATCCACTGGCTCAC
CATCAAGACATTGTTTATCACATAAAACAATCACAATTATTTCTGATGGT
GTTATAAGCAATACAATTCAGTATGGACTTGAAGGCTTGGTTTACCATTT
GAGGGGTATGATCGAACAAGAACCTTGCTACACGTTTTACGTCTACTTAT
CAAGAGAGCAACGTTTCATGAAATGGACTCACAAAGATGAGGCTTTTCAA
AATCGAATTGAGAATAATAACCTGATTCTTTTGTCACCAAATGAGACTCT
ACAAGTCATCAAAAAATATGGAGAGTTAATAACTACTTTGCGTTCGGCAA
AACAGACTTTGGTTTATTTTGCATTATCTGATCTCTATAAAAGAAATCAG
GGTGTATTTGACAGTTTACGCAATCTTCAGGTTGACGACAATGTTGAGGT
GGTTGTAATATGTGTTGTTGCTACATGCCCGACTCAAGGCGAAGAATGGA
TACCATTTTATCGGATATTACCATATGAAAACACCCAAAGTTCACAAACC
ACCATGCAGTTGTATCGAAATCTGAAAGACTTATTAAAGAATCCGAATTT
CAACCGATATGAATATATGAGAACAGTCGATTTACTGCCAGAACTGGTGA
TCAATCCTGAATGTGTCAAAGACATCAATTTCATTCATATCGCCATGGAC
AAAATCACTGACCCATTCTTACCAATGGCATTGAAGTTCATTGAACAAGA
AAACATTCATCGTCAAAAAGCCAATCTGCAACCACTGGCAATCGTCTTCC
AATGCTCCTTTGTAGAAAAGGAGAGCTTAGAGTTCTGGGGATACTATTTT
CATCGAATCAGAGAACACTATACGATTTATCCTGGTATTTTAGTATCCAG
TCTTCCCGAGTCGCCTATTCTAGGCACAACATATGTTTACAAGGCGTACA
ACCAAGTAAAAAATACTCGTTTTTATATTTCGATGTGGGAAGACAATCTG
ATTCTTGACTATCTGATGTTATTCAATCTCTACCTGGCTTTTAACAATGG
AGAGACAATTGAAAGACAATCCACTGGCTCACCATCAAGACATTGTTTAT
CACATAAAACAATCACAATTATTTCTGATGGTGTTATAAGCAATACAATT
CAGTATGGACTTGAAGGCTTGGTTTACCATTTGAGGGGTATGATCGAACA
AGAACCTTGCTACACGTTTTACGTCTACTTATCAAGAGAGCAACGTTTCA
TGAAATGGACTCACAAAGATGAGGCTTTTCAAAATCGAATTGAGAATAAT
AACCTGATTCTTTTGTCACCAAATGAGACTCTACAAGTCATCAAAAAATA
TGGAGAGTTAATAACTACTTTGCGTTCGGCAAAACAGACTTTGGTTTATT
TTGCATTATCTGATCTCTATAAAAGAAATCAGGGTGTATTTGACAGTTTA
CGCAATCTTCAGGTTGACGACAATGTTGAGGTGGTTGTAATATGTGTTGT
TGCTACATGCCCGACTCAAGGCGAAGAATGGATACCATTTTATCGGATAT
TACCATATGAAAACACCCAAAGTTCACAAACCACCATGCAGTTGTATCGA
AATCTGAAAGACTTATTAAAGAATCCGAATTTCAACCGATATGAATATAT
GAGAACAGTCGATTTACTGCCAGAACTGGTGATCAATCCTGAATGTGTCA
AAGACATCAATTTCATTCATATCGCCATGGACAAAATCACTGACCCATTC
TTACCAATGGCATTGAAGTTCATTGAACAAGAAAACATTCATCGTCAAAA
AGCCAATCTGCAACCACTGGCAATCGTCTTCCAATGCTCCTTTGTAGAAA
AGGAGAGCTTAGAGTTCTGGGGATACTATTTTCATCGAATCAGAGAACAC
TATACGATTTATCCTGGTATTTTAGTATCCAGTCTTCCCGAGTCGCCTAT
TCTAGGCACAACATATGTTTACAAGGCGTACAACCAAGTAAAAAATACTC
GTTTTTATATTTCG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033250	XLOC_033250	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052592-protein	TCONS_00052592-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052592-exon-scaffold_218-1491911889:557083..557183	TCONS_00052592-exon-scaffold_218-1491911889:557083..557183	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1510915933:557083..557183	TCONS_00052592-exon-scaffold_218-1510915933:557083..557183	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1575043694:557083..557183	TCONS_00052592-exon-scaffold_218-1575043694:557083..557183	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1491911889:557434..557534	TCONS_00052592-exon-scaffold_218-1491911889:557434..557534	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1510915933:557434..557534	TCONS_00052592-exon-scaffold_218-1510915933:557434..557534	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1575043694:557434..557534	TCONS_00052592-exon-scaffold_218-1575043694:557434..557534	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1491911889:571602..572209	TCONS_00052592-exon-scaffold_218-1491911889:571602..572209	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1510915933:571602..572209	TCONS_00052592-exon-scaffold_218-1510915933:571602..572209	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1575043694:571602..572209	TCONS_00052592-exon-scaffold_218-1575043694:571602..572209	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1491911889:572562..573003	TCONS_00052592-exon-scaffold_218-1491911889:572562..573003	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1510915933:572562..573003	TCONS_00052592-exon-scaffold_218-1510915933:572562..573003	Clytia hemisphaerica	exon
TCONS_00052592-exon-scaffold_218-1575043694:572562..573003	TCONS_00052592-exon-scaffold_218-1575043694:572562..573003	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_218	supercontig	scaffold_218:557083..573003 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.170075	0.0995102	0.154055	0	0.550455	0.434977	2.53644	3.11153	1.40453	0.461563	1.55078	0.815539	0.927517	0.963236	1.89286	1.01566	0.434095	0.497279	0.0361588	0	0.230214	0	0.117003	0.106373	0.76693	1.043	0.279849	0.199108	0.0377541	0.0384655

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00052592 vs. Swiss-Prot (Human)

BLAST of TCONS_00052592 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00052592 (transcript) - C. hemisphaerica