|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052681 ID=TCONS_00052681|Name=TCONS_00052681|organism=Clytia hemisphaerica|type=transcript|length=507bp
NNAAAAACAATCAAAacgaacaaaacaaaacaaaaaacagagCTAAAAGC
ATAATGATAAAACAATCGATGGGAatcttttcaataattttgaaatatag
aGAACATATAAAAACTCTAGGCACTCTCACACATACTCTGACCTTGCAAA
AATTCGACTTGATTGGAGGCGAATGTATCAAAATACTGCGAATAAAGTTC
ActtaaaatattctaaaatatATTAAAAGGTTTATATTAATATAAGAATT
TATTATATACTAAAAAGCATGctgtacaaaaaaaaaagaatttaaagata
ATTTAAGAAATCTAATagaaaattatatcaaaattaTTTCGAATCAATAA
CTatttaatattttaaatttataaATTAATTCATCAGTATCAACCATGGA
AGAGTACAACCCTTTCATCCTATTGTGAGGCTTCCCAAAGTGTCCCACTC
TTCGGTGCAAACACTTTTCTTTAATAAACAAGCCCTTCTACATGTCGATA
GAATTAA Run BLAST on NCBI transcript from alignment at scaffold_218:602760..603400- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052681 ID=TCONS_00052681|Name=TCONS_00052681|organism=Clytia hemisphaerica|type=transcript|length=641bp|location=Sequence derived from alignment at scaffold_218:602760..603400- (Clytia hemisphaerica)
NNAAAAACAATCAAAACGAACAAAACAAAACAAAAAACAGAGCTAAAAGC
ATAATGATAAAACAATCGATGGGAATCTTTTCAATAATTTTGAAATATAG
AGAACATATAAAAACTCTAGGCACTCTCACACATACTCTGACCTTGCAAA
AATTCGACTTGATTGGAGGCGAATGTATCAAAATACTGCGAATAAAGTTC
ACTTAAAATATTCTAAAATATATTAAAAGGTTTATATTAATATAAGAATT
TATTATATACTAAAAAGCATGCTGTACAAAAAAAAAAGAATTTAAAGATA
ATTTAAGAAATCTAATAGAAAATTATATCAAAATTATTTCGAATCAATAA
CTATTTAATATTTTAAATTTATAAATTAATTCATCAGTATCAACCATGGA
AGAGTACAACCCTTTCATCCTATTGTGAGGCTTCCCAAAGTGTCCCACTC
TTCGGTGCAAACACTTTTCTTTAATAAACAAGCCCTTCTACATGTCCATC
GACTTAAAGNTTAATTTATCAGTATCAACCATGGAAGAGTAACCCCTTTC
ATCCTATTGTGAGGCTTCCCAAAGTGTCCCACTCTTCGGTGCAAACACTT
ATCTTTAATAAACAAGCCCTTCTACATGTCGATAGAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052681-exon-scaffold_218-1575043694:602910..603400 | TCONS_00052681-exon-scaffold_218-1575043694:602910..603400 | Clytia hemisphaerica | exon |
| TCONS_00052681-exon-scaffold_218-1575043694:602760..602775 | TCONS_00052681-exon-scaffold_218-1575043694:602760..602775 | Clytia hemisphaerica | exon |
| TCONS_00052681-exon-scaffold_218-1510915933:602910..603400 | TCONS_00052681-exon-scaffold_218-1510915933:602910..603400 | Clytia hemisphaerica | exon |
| TCONS_00052681-exon-scaffold_218-1510915933:602760..602775 | TCONS_00052681-exon-scaffold_218-1510915933:602760..602775 | Clytia hemisphaerica | exon |
| TCONS_00052681-exon-scaffold_218-1491911889:602910..603400 | TCONS_00052681-exon-scaffold_218-1491911889:602910..603400 | Clytia hemisphaerica | exon |
| TCONS_00052681-exon-scaffold_218-1491911889:602760..602775 | TCONS_00052681-exon-scaffold_218-1491911889:602760..602775 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_218 | supercontig | scaffold_218:602760..603400 - |
Blast
The following BLAST results are available for this feature:
|
