TCONS_00052685 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052685
Unique NameTCONS_00052685
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052685 ID=TCONS_00052685|Name=TCONS_00052685|organism=Clytia hemisphaerica|type=transcript|length=197bp
CGAACAGATCCCCGATTACTTATTAAATCGTCTGCAACGTATACAGAACA
TTACTGCAGGATATGTCCTAAACCGATATGCCACACTGATAGATGTTGTC
GATCTGCAATGGTTACCAATAAAAGAGCTTAGtgattttaatgtttccaa
acttGTTTACAAGGCccttaatgataaaaaatggcCTTCATATCTTT
Run BLAST on NCBI

transcript from alignment at scaffold_218:18885..19081

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052685 ID=TCONS_00052685|Name=TCONS_00052685|organism=Clytia hemisphaerica|type=transcript|length=197bp|location=Sequence derived from alignment at scaffold_218:18885..19081 (Clytia hemisphaerica)
AAAGATATGAAGgccattttttatcattaaggGCCTTGTAAACaagtttg
gaaacattaaaatcaCTAAGCTCTTTTATTGGTAACCATTGCAGATCGAC
AACATCTATCAGTGTGGCATATCGGTTTAGGACATATCCTGCAGTAATGT
TCTGTATACGTTGCAGACGATTTAATAAGTAATCGGGGATCTGTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033289XLOC_033289Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052685-exon-scaffold_218-1491911889:18885..19081TCONS_00052685-exon-scaffold_218-1491911889:18885..19081Clytia hemisphaericaexon
TCONS_00052685-exon-scaffold_218-1510915933:18885..19081TCONS_00052685-exon-scaffold_218-1510915933:18885..19081Clytia hemisphaericaexon
TCONS_00052685-exon-scaffold_218-1575043694:18885..19081TCONS_00052685-exon-scaffold_218-1575043694:18885..19081Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_218supercontigscaffold_218:18885..19081 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052685 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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