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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052706 ID=TCONS_00052706|Name=TCONS_00052706|organism=Clytia hemisphaerica|type=transcript|length=1304bp
GCTGGTAtcgtgtacacgtttttttattagaacctagtttataagaacat
ataggctgaaattcgtgtATTCTACAGAGTGGCCCAAAATTGCCCTTTTA
ACTAAACCAGTCCTAGGATACTGTATCTAGTGATTggaaaatgctattga
cttgaaattttgacaagaGTTAGCTATACCGATAATAAGAAAGTGAGCAT
CCGGGTAAAAAAAGGACTTGTACCTTCGAGGGACCAAGGATTtccttcaa
attaaaaaaagatttcataatTACGGACGGTACTTTAATTTACTTTCCAG
CTGAGCGGACTAATGTTTaacttcgaattacagaaagataaAAATAGTGG
AGGTtgaaattagagagagttggcAACATCGACGATTGAATTGAACCTAA
TATTTAAAGATTTAACACGTGATTTTTGACGAGATGAGTTTGATGGTGAG
AtagtttaatatttttgttatgatGAAACGGGAAAGTTTGATACATAACA
GTTTTCTAGTGGCTGTCAAATGTGGATATATCTAACGCAAGCTAAAAATA
TTGGCACTGCGGGGACTTCGGACCAGCCTTTAGCGCCAAAATTATGCTTT
ATCTTTGAGAAAGCCTGGAGACTTccaaaatggtcagatttgacTGAAAT
TGGGCATATTCAGTCCTTGGGTCAATAGATGAGGCGCTTGTTTTTCAttt
atagaaaattttcaattttgtgccTTTGAGACAGATTTAATGCATGTCAG
ATATACCCGTCATGTGGATGGGAAATATAGATAAAATGAAcgtgtcggat
atatccgaaaAAGAGTGAAATACGCGTGGCGGATATATCCGACAATGGCA
CAGAAAGGGTTAAGATGGTGTACGGGTTTCAAAGTTATAAATGACTGTGT
TAGTCTATTTTTGGGTCATTATTCTGATGTTTGAATGAAGAAAAGGCTGT
CGCTACTGTTAAGTCTCTCTAACTCGATCTTGAAGGGAGcagaaattttc
ttcgaattagagaaaaattcaaattgcaGAGTGTATTGCATATTTTTCAG
CTGAGGAgcattagttcgaattatagaaagattcgaatagtaggggttcg
aattaaagagattTTACTGTATTAGGGTGTTcccaaagtttttcaaaact
cGCTCTACGATACACATCCGCTACACTAAATCTCGTAATGCTTAAGCCTT
TTGTTGTCTAGCAGTGTCTAATCGTCTGTTTGTTCACTACTCTCAAAGAA
ATGAGATGATTTGATATGATTTGAACATTGAATCAAATGAATgatcaaac
aaaa Run BLAST on NCBI transcript from alignment at scaffold_218:491659..492962 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052706 ID=TCONS_00052706|Name=TCONS_00052706|organism=Clytia hemisphaerica|type=transcript|length=1304bp|location=Sequence derived from alignment at scaffold_218:491659..492962 (Clytia hemisphaerica)
ttttgtttgatcATTCATTTGATTCAATGTTCAAATCATATCAAATCATC
TCATTTCTTTGAGAGTAGTGAACAAACAGACGATTAGACACTGCTAGACA
ACAAAAGGCTTAAGCATTACGAGATTTAGTGTAGCGGATGTGTATCGTAG
AGCgagttttgaaaaactttgggAACACCCTAATACAGTAAaatctcttt
aattcgaacccctactattcgaatctttctataattcgaactaatgcTCC
TCAGCTGAAAAATATGCAATACACTCtgcaatttgaatttttctctaatt
cgaagaaaatttctgCTCCCTTCAAGATCGAGTTAGAGAGACTTAACAGT
AGCGACAGCCTTTTCTTCATTCAAACATCAGAATAATGACCCAAAAATAG
ACTAACACAGTCATTTATAACTTTGAAACCCGTACACCATCTTAACCCTT
TCTGTGCCATTGTCGGATATATCCGCCACGCGTATTTCACTCTTtttcgg
atatatccgacacgTTCATTTTATCTATATTTCCCATCCACATGACGGGT
ATATCTGACATGCATTAAATCTGTCTCAAAggcacaaaattgaaaatttt
ctataaaTGAAAAACAAGCGCCTCATCTATTGACCCAAGGACTGAATATG
CCCAATTTCAgtcaaatctgaccattttggAAGTCTCCAGGCTTTCTCAA
AGATAAAGCATAATTTTGGCGCTAAAGGCTGGTCCGAAGTCCCCGCAGTG
CCAATATTTTTAGCTTGCGTTAGATATATCCACATTTGACAGCCACTAGA
AAACTGTTATGTATCAAACTTTCCCGTTTCatcataacaaaaatattaaa
ctaTCTCACCATCAAACTCATCTCGTCAAAAATCACGTGTTAAATCTTTA
AATATTAGGTTCAATTCAATCGTCGATGTTgccaactctctctaatttca
ACCTCCACTATTTttatctttctgtaattcgaagttAAACATTAGTCCGC
TCAGCTGGAAAGTAAATTAAAGTACCGTCCGTAattatgaaatctttttt
taatttgaaggaAATCCTTGGTCCCTCGAAGGTACAAGTCCTTTTTTTAC
CCGGATGCTCACTTTCTTATTATCGGTATAGCTAACtcttgtcaaaattt
caagtcaatagcattttccAATCACTAGATACAGTATCCTAGGACTGGTT
TAGTTAAAAGGGCAATTTTGGGCCACTCTGTAGAATacacgaatttcagc
ctatatgttcttataaactaggttctaataaaaaaacgtgtacacgaTAC
CAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052706-exon-scaffold_218-1491911889:491659..492962 | TCONS_00052706-exon-scaffold_218-1491911889:491659..492962 | Clytia hemisphaerica | exon |
| TCONS_00052706-exon-scaffold_218-1510915933:491659..492962 | TCONS_00052706-exon-scaffold_218-1510915933:491659..492962 | Clytia hemisphaerica | exon |
| TCONS_00052706-exon-scaffold_218-1575043694:491659..492962 | TCONS_00052706-exon-scaffold_218-1575043694:491659..492962 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_218 | supercontig | scaffold_218:491659..492962 . |
Blast
The following BLAST results are available for this feature:
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