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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052712 ID=TCONS_00052712|Name=TCONS_00052712|organism=Clytia hemisphaerica|type=transcript|length=1214bp
ACGATGGAGAGTCTCCCTCACACAAATAAAAGCTTCTTTGACGTAATTTT
GAACACAGAAAGTGAAACGTATCAACAGATGtaccttttgaacattttgt
gtACAGAAAGCATTTATGTTTCtttgaaagaacaaaatattttttctaca
agaaaatttatagaaaatatttttttttcgaatctcgagaaaattgagTG
TGTGAATTCACCACGTTCACATACCCTGTATCTGCCTCTGGGTTGCTGCC
AAGCACAAAGGTAAGGTCAATGGATGATTCCAACTTGCAGCAGTTCTCTC
TTGGCAAGTGCATGAACCTTCCCCccggtcaacccatgccatgtaaGGGG
AATAGGTAAAGTGTCTATAATTACAAAAATGGGCCTCAAAGCGTCCTGTT
TGCAACTCTaccaaaaagaaatagaaattatCTAAAtagaaatttagatt
ttgcCTTTGATTTTCAGTCTGCGCCAGCAAAGCTTCTCACGCCCCATCAC
CCAGAAGGTTAGaattcatccgccatttttggtgCTTTTTTTGCTGGCGC
GGGGTATAAGCAgcatagatatcttatataaaacattaGATAGAGCTACT
TGGTATTCCCAAGCAACagcaggtgaagcaaaataatgcgccatctttgc
tgaatGATAGGTCACAGTTCAGTGGCATATTGTTGTTCACCGTACACcga
gaaaaaaaactgaatggTGCGGCGACGCAACaagatttctatttctattt
gattgagtagcaggaggctttgaggcctatttttgcaactatagacgctt
tcaatgagcatcccgtcagcaccttggactgactactcAATTCCcttcac
atggcatgggttgacccgggcggaGGTTTATTCACTgacaatgaccacta
taccacagcgccttaTAGATAGGCTTGATCAATCAATTTGCCAGCACCAA
ACTATGGTCTacttatcaaagatggcggattacTTTGCTTGTACCGTTGG
CTAAATCTTCATGATGCACCGACAAGCACGGAGActtagaaaaatttttg
aaacttttcaatactTTACCCCGGTTCGAACAGCTACATGTTTCCGATTA
CGAAACACGTATAGTCTATACCACTGGGCCACGACGGCTGCTAATTTTCC
GAAATTCAAGGTTATTTATAGAGTGACACATATAGTATATACGGGTGAAC
AGACCtcacgagtt Run BLAST on NCBI transcript from alignment at scaffold_218:625474..626687 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052712 ID=TCONS_00052712|Name=TCONS_00052712|organism=Clytia hemisphaerica|type=transcript|length=1214bp|location=Sequence derived from alignment at scaffold_218:625474..626687 (Clytia hemisphaerica)
aactcgtgaGGTCTGTTCACCCGTATATACTATATGTGTCACTCTATAAA
TAACCTTGAATTTCGGAAAATTAGCAGCCGTCGTGGCCCAGTGGTATAGA
CTATACGTGTTTCGTAATCGGAAACATGTAGCTGTTCGAACCGGGGTAAa
gtattgaaaagtttcaaaaatttttctaagTCTCCGTGCTTGTCGGTGCA
TCATGAAGATTTAGCCAACGGTACAAGCAAAgtaatccgccatctttgat
aagtAGACCATAGTTTGGTGCTGGCAAATTGATTGATCAAGCCTATCTAt
aaggcgctgtggtatagtggtcattgtcAGTGAATAAACCtccgcccggg
tcaacccatgccatgtgaagGGAATTgagtagtcagtccaaggtgctgac
gggatgctcattgaaagcgtctatagttgcaaaaataggcctcaaagcct
cctgctactcaatcaaatagaaatagaaatcttGTTGCGTCGCCGCAcca
ttcagttttttttctcgGTGTACGGTGAACAACAATATGCCACTGAACTG
TGACCTATCattcagcaaagatggcgcattattttgcttcacctgctGTT
GCTTGGGAATACCAAGTAGCTCTATCtaatgttttatataagatatctat
gcTGCTTATACCCCGCGCCAGCAAAAAAAGcaccaaaaatggcggatgaa
ttCTAACCTTCTGGGTGATGGGGCGTGAGAAGCTTTGCTGGCGCAGACTG
AAAATCAAAGgcaaaatctaaatttctaTTTAGataatttctatttcttt
ttggtAGAGTTGCAAACAGGACGCTTTGAGGCCCATTTTTGTAATTATAG
ACACTTTACCTATTCCCCttacatggcatgggttgaccggGGGGAAGGTT
CATGCACTTGCCAAGAGAGAACTGCTGCAAGTTGGAATCATCCATTGACC
TTACCTTTGTGCTTGGCAGCAACCCAGAGGCAGATACAGGGTATGTGAAC
GTGGTGAATTCACACActcaattttctcgagattcgaaaaaaaaatattt
tctataaattttcttgtagaaaaaatattttgttctttcaaaGAAACATA
AATGCTTTCTGTacacaaaatgttcaaaaggtaCATCTGTTGATACGTTT
CACTTTCTGTGTTCAAAATTACGTCAAAGAAGCTTTTATTTGTGTGAGGG
AGACTCTCCATCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052712-exon-scaffold_218-1491911889:625474..626687 | TCONS_00052712-exon-scaffold_218-1491911889:625474..626687 | Clytia hemisphaerica | exon |
| TCONS_00052712-exon-scaffold_218-1510915933:625474..626687 | TCONS_00052712-exon-scaffold_218-1510915933:625474..626687 | Clytia hemisphaerica | exon |
| TCONS_00052712-exon-scaffold_218-1575043694:625474..626687 | TCONS_00052712-exon-scaffold_218-1575043694:625474..626687 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_218 | supercontig | scaffold_218:625474..626687 . |
Blast
The following BLAST results are available for this feature:
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