TCONS_00052755 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052755
Unique NameTCONS_00052755
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1960

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052755 ID=TCONS_00052755|Name=TCONS_00052755|organism=Clytia hemisphaerica|type=transcript|length=1960bp
aagcaaaaacaaacaaaaatttataattcacaATATTCAAATCTGTTCAA
ATCAACACAAAATCTAAATATTagtcaaaaaatacaaacaaaagcATGGA
ATCGATATCAAAAGATTGGGTGGATATGGCTGATACAGGGACATGTGATT
CCCGATGGATCTTTCGTGATTACAAATGTGAGAAATACATGTTTGCTGAA
GACTACGATCGCAATGAAATCAAAATGAGAGTATTGGAATCCCATAGAGT
CAAAGATACTATTGAAAAGAGAAAACGAGAGACGGGCATTCACCAAAGTC
AATCACTTCAAGAAGCAGCACAGATCATAGATGAAATCGCTCACACATTC
AGTCTAGGGACGATCAGATTCATGGCTTATTCATTGATTAAGATTATCAA
GAAATTATTCCAAAGAGTCTTGGTCAACAAAGAGGGAATAAAGCAATTCA
ATGAATGCGCAAAGATGACACCCATTGTCTTAGTTCCAACACATAGCAGC
TACTTTGATTTCTTGCTTGCGTCAGCCATTTGTTTTGCACTCGACCTACC
TTTACCAGCAATTGTGGCCGGACAAGattttttgaACATAGCAGTTGTTA
ACCATTTGCTTCGTGGTTCGGGAGCTTTCTATATGAGACGATCGTTTGCG
TCGGATACGTTTTACAGAAGCATCTTCACTGAATATGTTCAACAAATACT
GTGTATTGGTGAGCGACCTGTTGAATTCTTTCCTGAAGGAACGAGGAGTC
GAAGTGGAAAAGCTCTCCAACCGAAACTTGGGCTTTTATCCATGGTACTG
GAAAGTTGTTTTCATGGCTTCGTGAATGACGTGTCTTTCATTCCGATGAG
CATCAGTTATGAGAAGATCACCGAAGAAATGTTGTATGCGTTCGAATTGG
TCGGCATACCCAAACCTAAAGAATCTCTATCGGGCCTTTTGAAAGCGCGT
TCAGTTTTGACAACAGATTACGGGACAGTTAGCGTGACGTTCGGCAAGCC
GATGTCACTAATGGAATATTGTGGCAAGCAAATTGATGGCATGGACTATG
TTCGAATACCGAGATGTGAGCGACATCTGAAAATATTCGGCCGTGGAGCT
CAAGAGATGAAGATCGCTaaatattttggtgaaaaattgatttttcaaca
acaacaaaacttGGTCATTTATCCTCGCGCTGTCGTCACTTACATAATGA
TGAGTCAGCAGAATGATGTCTATGTggAACATTTAGCGTTCAAAGTGGAC
AAAATCGGACACCTGTTGAGAGAATTGGGTTTTCGAACTTATGGATTTGA
AGATCTGTTAACAAATTCAAGTGGCATTGAACAAGCAGTGAAATTCAGTG
ACATGGTTCTCACCTGCGATCACGAAACTAAAATAATATCACGTACAACA
TCTGCGTTCACCGATCCCAAGTTACGTACTACAGCACTGTATAACGCGTT
CGGTAAAAGCGAGGAACTTCTTTCGAAGAGTTTGGCGTACATTTATTCAT
CATGTCAACGCAATAAGCTGGTCCATCCGTTCCTTCTCCCCTCGTTAGTT
TTACATTCCATCAAAGTTAGGAATGATTTGAATGGAGCACGGAACCTGTT
CTGTTTCTTGAAACAAGTCTTCAGGATCGAGTTCATCTTCGATCCTGACA
AAACCGGTGAACAGGATTTCAATGAAACATTACCAAAGCTGCAATCAATC
GGTTTGGTTTCTATGACTACCGCCGATAACCAAGTGGAACTGTGCTCCAA
ATGTTCATTTGAAATCGACTTCTTAATGGGTCTTGTGCAACCTTTCCTGG
ATGCTTATATGATTGTATTGGTGAGCTTTCTACATGACACTTTTGAATAT
CCTCTGAAAATGAAACCGATGACCAAATTGCTACAACTGCAGGCTGCCAA
GTTTATCAATTCTGGtaaaatattaatattaattATAAGATTAAGGATCT
TTACTTCGca
Run BLAST on NCBI

transcript from alignment at scaffold_22:145410..159972+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052755 ID=TCONS_00052755|Name=TCONS_00052755|organism=Clytia hemisphaerica|type=transcript|length=14563bp|location=Sequence derived from alignment at scaffold_22:145410..159972+ (Clytia hemisphaerica)
aagcaaaaacaaacaaaaatttataattcacaATATTCAAATCTGTTCAA
ATCAACACAAAATCTAAATATTagtcaaaaaatacaaacaaaagcATGGA
ATCGATATCAAAAGATTGGGTGGATATGGCTGATACAGGGACATGTGATT
CCCGATGGATCTTTCGTGATTACAAATGTGAGAAATACATGTTTGCTGAA
GACTACGATCGCAATGAAATCAAAATGAGAGTATTGGAATCCCATAGAGT
CAAAGATACTATTGAAAAGGTAGgttcattttgatttgagtCTACCCTAT
AGTATAGTTctttaaacattaaaaacataGTTGTGTGTATGCAACGTTTC
CACGGTTTGTctaattttgtttgtttctctAATTTATTTGTTAGAACCTT
GGCTTGGATAACATCCCCAATTAATAATGATTTCTATTTAATCATTTAGA
GAAAACGAGAGACGGGCATTCACCAAAGTCAATCACTTCAAGAAGCAGCA
CAGATCATAGATGAAATCGCTCACACATTCAGTCTAGGGACGATCAGATT
CATGGCTTATTCATTGATTAAGATTATCAAGAAATTATTCCAAAGAGTCT
TGGTCAACAAAGAGGGAATAAAGCAAGTAAGAATCTATTCGTCCATTCAT
CTATTCGTTTATATATTCGTCCATTTATCCANTAAAGCAAGTAAGAATCG
CATTCTTCATCCGTCCATTCGTCCATTCATCTATTCGTTTATCTATTCGT
CCATTCATCCATTTAtccattcgtttatctatttgTCTATTCATCCATTC
GTTTATCCATTCGCCTATTCATCAATTCGTTTATCCATTCGTCCATTCAT
CCATTCGTTTATCCATTCGTCTATTCGTTCATTCGTTTATCCATTCGTTC
ATCCATTCATCCATCCGTCCATCCATTCATTTGACCCTTCATGAAGCTTT
CCTACTTATTTGAAGATTCTGATTTGCAGATTCTGATTTGCAGATCGAAA
TCTCAGATTCATTAACTTGTTctccatttttcttttacaaTAGTTCAATG
AATGCGCAAAGATGACACCCATTGTCTTAGTTCCAACACATAGCAGCTAC
TTTGATTTCTTGCTTGCGTCAGCCATTTGTTTTGCACTCGACCTACCTTT
ACCAGCAATTGTGGCCGGACAAGGTACGTCAATTTCTGATTTATCAAATG
TTGGACTTATTATTAACCTTTCagtaaaaagaattttcaaatactTAAAA
CAATCATCCCCTCAAAATTGTTTTCCCCATGAGCTATTAgaattactgta
atttttttctatcataagtattttgaaaatatttttgccaaaatcttATA
GTTAAACTAAATGAAATGTCTCATACATCTATATACAGTCTGAATCCATT
GAATTCTTTTCCCTTTTTCCACCCTTTGTGTTTATTTCCACTCTGAAAAT
CAATGTTGCATGTTTTGAACTCAAAACTTTTACCAACAAGAAATTGTAGG
TAGGTTGATTAGATGTTTACATTTCTTTAGTCATAGAGATTATCAGTGTT
GTGTTTTTCTTAACgattcaattttgaaaatatgagtACAATCAGAAGGT
CTCAGTACAAATGGTGCCCggagggtactagggttgcgagctgatggggg
cggggtgccgcccgactttcgaactttggacccttaccgggacttaAACG
GAGAAAACAAAGgtaaattttgggaattttacgacccttaccgggacaaa
tttgaccaattttgacaaaatttcgatctttcaggggataaaaattttcc
catttttcctACCcatagtgggactgaaatttgattttctggtttttccg
acccttagcgggactttggaagtccaaaaaaggtacccttaagggcggca
cataccgtaccctcaatttgcctaagtaccccccccctctGGGAAATGGT
GGCGGAAAACATCCTTCACTGTGCCCGATGGTGTGCGAAgtatctctcga
aacgtagccataCGTAAATCTCCTAATCCAAGCCATGATAAACTTCTGAT
GCGAATATCACTGGGTCGACAAACTCAAACCGGTTTAGAGATTAAACAAT
ctacacgttttattttttattagaacccagtttataagaacattgaggct
aaaatttgtcgaaaaattaagaacatcgtaagaacatgcacAGCCTCAGT
ttgggaaaaaaatgacaagaaactacaattttttcttcttttcaagtagt
tttaaccgaacttagggatggattttctaaaatcgagagtcaaatattgt
ccaaatNacccagcctcagtttggaaaaaaaatgacaagaaactacaatt
ttttcctcttttcaagcagttttaaccgaacttagggatggattttctaa
aatcgagagtcaaatattgtccaaatttaaCCAATTTTaggtgctcttta
ttttgcatgatattgtcgatttagagtagtctgaaaaatcaagaatacat
ttaagaacattttaggctgaaaactgccaaaaaaataagcacatccaagA
TCAGCCaaatttaggtgttctaataaaaaaaaaacgtgtattcccttctt
tttccagattttttgaACATAGCAGTTGTTAACCATTTGCTTCGTGGTTC
GGGAGCTTTCTATATGAGACGATCGTTTGCGTCGGATACGTTTTACAGAA
GCATCTTCACTGAATATGTTCAACAAATACTGTGTATTGGTGAGCGACCT
GTTGAATTCTTTCCTGAAGGAACGAGGAGTCGAAGTGGAAAAGCTCTCCA
ACCGAAACTTGGTAAGTTACGATTCATGACGTAACGGtttaattcttgat
atgcgcgagtaaaaagattacatcatttttCATATCNTGGTTTAATTCTT
GATAGGCGTAAGTAAAAAGAGTACATCATTTTCATATCGGAGACAACCGA
GAGAACCGTAATCTGACCCGTGTGTTGCTATTTTTAGTGACACTCAAGGC
TCAAATTCCGgtgttttcgggtgtttccgacaAGGAAAATGACTTAATCT
TGACTGACGCATATGACGGAAGCATAAAAAATAACCCTGGCGTCTGCTTA
CTAGTTTTGCATACactctttttattttataagaacaacgaggctcaaaa
tcgccgaaaataagaacagtttgaCAATAGTGCTGAGCCTGGAATTGCTC
CTAGCTCCAAGCAATTTAGGGATCACAGTAGTAAAAATTTCCCTACAAAT
AAGGGAAGATATGAACAGTTTGAGGCTTGtggtgccaaaaaaataagatg
gGTGGAGCCTCATCAAAAATatactgattcttataaaaacaatagtATTG
TTCAGATTCAAAATAAGTGACAAACACCAAGTCGTTTTTGGGCGCTTCCg
tttaaaacattacgtcatgaatatcactaATTGAGCGGTcaagattattt
tatttttatgcaTCCTTTTGTGGTGGAAGTTTCAAGTTGTTCAATCTTTA
TAGTATAGCAAGTTTGCGAACGCACTCGATGACTCCTCTTCCGAATCTTT
GCGGGACCAAAGATCTCGTACTTAGTACCGGGTGTGTCAAAAAAACGGTA
AGCTTTTATAATAGGCTCAGTGTcatatttgcaaaattttatgagcataa
gtagaaaaagctacgtcaaaatttcaattttaggcccgttttttttttac
acacCCGGTAcaacaattttgtttttaaataagagtgatattgtttgctt
actcatcaattttgatttacgCAAGCTTTTTGCTATTgcattgacacgaa
tgtggagcaagattgatcagaaagaggaaaagaaaaacaattattttgct
tatatatgtaaaaacaaaatctttaatgcCTCTCTGTCTTCTACTTTTTG
TGTCAACTGTTATGCAGAGAAGcagcttttgttttgaaattaatgtTTAA
CAAAGTTATTGTTAGGTTCAAGGGGATTTTTGAATGGGTAGCCAAATTCT
TGAAACATCTTTTCTTCTAAAGTGACaatgaacatatttttgtattttaa
gtctcgataactcgaacacgcacggggaacgaAAATTTGTTCATGTTATG
GAAATCTCGAGTTATGgaaccttttttattttagtttattaGGCATTCTT
AACTGAAGGAACCAGGAAACTTGTTCGGGTACAGAGACATTCGcctaata
gaggttcgagttacggagactctactgtataacttttaatttatcttttc
tttttttgtaggGCTTTTATCCATGGTACTGGAAAGTTGTTTTCATGGCT
TCGTGAATGACGTGTCTTTCATNACTTTTAAtttatctgttctttttttg
taGGGCTTTTATCCATGGTACTGGAAAGTTGTTTTCATGGCTTCGTGAAT
GACGTGTCTTTCATTCCGATGAGCATCAGTTATGAGAAGATCACCGAAGA
AATGTTGTATGCGTTCGAATTGGTCGGCATACCCAAACCTAAAGAATCTC
TATCGGtaagcttttattctatttgttttttatatacagtcaactctcta
tCTCTCTAGTTCGAACCTCCACTATTCGAACCTTTCAATTCGAACTAAAG
TATTGATCCCCTCTGCTGAAAATTAGTATAAAAtgctctctgtaattcga
atctttctctaattcgaagaaaatttttggtcgaattagagagagagtca
aTACTGTACTTAGCTTGTTATGACATGAGACTTTCGGAAACATTCTTACA
CTCTTGTGATGGGTTCTCGGCATTCTCGACCTCAATTGGACTAGAATCTA
ATAATGTCAGTCTATTTTACTGAtcagtcacaaaaactttagggtaTCCT
CAAAAATAGTcttttttggctaaaatttgGTGTACTTCTGACTGAAAATT
GTCCAGTGAACTTATCAgcaccatccagtctatcaaagaGCTATAAGTGG
CCCCTTGGCTAATTCCTTTGGTGAATTTAATTCCTTAACTTGTTTCTTGA
TCTCTTTCTAAACACTGAAATCTTTCTCCTCATCCAGGGCCTTTTGAAAG
CGCGTTCAGTTTTGACAACAGATTACGGGACAGTTAGCGTGACGTTCGGC
AAGCCGATGTCACTAATGGAATATTGTGGCAAGCAAATTGATGGCATGGA
CTATGTTCGAATACCGAGGTAtggttattttttatttttcacgcTTTCCC
TAAAAAAGCGTGCACTTTCATATTGTTTTCCTAAAGAAATCTTTAAGTTA
ACTACAATGATTATTTTACATATAATGTACAGCGGCCTTAACATGAAcat
agtgggcacccccccCCCAGGATTCTGGAGGGGGGGTTgacgattttcaa
attttttgaatcagGTGGGGGTCGagttgatgaaaaaattcaGGTGGGGT
AACCCTATACAGGTGGGGGTGgaaattttcaggtgggggttgtgTAGTTT
TGAGTGCATCTTTCagttgaacaaaaaaagaaaaactttgaaaaaacaat
atATACAGGCTTGCtaattataaaagaaaaaagctcACTTTTTTTAGCAC
AGCTGCCTCACACTTACTAATAGGATCATGAAATGGCTAAATGATCAGGC
AAACAAAAAAGAGTCCAAACCTATAAGAAAAACATCCCAATTTGTAGTAT
AATGTATACAAATTTAATATAACACTGGTGAGGGTGTTTCAATCAAATCT
attaatgaaaacttttaaaatttgagaaacagatgaaattggatttttca
ggtgggggttggaagattttttaaaatcagGTGGGGGTTGCCCAAGAAGG
TGGGGGTTGAGTAGTCCtcaattttcaggtgggggtaagcCTATGCAGGT
GGGGGATGGAGGGGTGTTGCCCACTATGATGAAGGTAGAGCTATATGTAG
GTGCTCAAGGTCATTGGTTCAATCCCTGGCCGGGTCACACCGAAGATTTC
GTACTTAGTAAAAAATGGTAATTGATTCCTCTCTGCTCGATGCTCGGCAA
TTAAAGAGAAGTAAAAGGGTAAGTGGGGAAAAGAATGGTGCCCTCGCCCA
ACCCCCTTACTTTGGGTAAACAGCTAAAGAAAAGTGAACTTTCTGTGGTT
GCAAACTCACTTACTTACCATTGAACATGTCCTCCATGAACAATGAAAAG
AGTAAGTTTGAAGAGAATCCATACCATACGCTTCAAAACAGACAGGATTT
CCATTTTCTTTCTAGATGTGAGCGACATCTGAAAATATTCGGCCGTGGAG
CTCAAGAGATGAAGATCGCTaaatattttggtgaaaaattgatttttcaa
caacaacaaaacttGGTCATTTATCCTCGCGCTGTCGTCACTTACATAAT
GATGAGTCAGCAGAATGATGTCTATGTgggtatgttttgtttttgtgtca
ccactttcattttcggaatattttgttatttaaaaacAAGACTTAAAGTT
GCAGCTTCCTCCACAAATTTATTCTAGAGCAGTGTTTAACATCACTTGgc
ccttgttttgaaattattttgaaatttctgactTGGCTTGTTCCTCGAAT
GTCATTAATCAAATGAGGTTGTTAAttaaatttaaccgctaaaaaccGAG
AATTTTTATGCCAAAAATCAGTGTTGCAACTTTTACGTTTGTAGACGGAT
ATCCGTCCAGTTGAGTTACAAATATATCATTTCCGTCTTGCCAGTAAGAG
GGTTTTTGGTTCAAGTGACCATCTAATCCTAAGGTTTCCGTCCATATTCA
CAAAACCTAGTTGCAACACtgaaaaatacattcaaatgtagcgtttttga
ttctctaaaacaagcaaagaattgtatttgactatcaaaaggcattcttg
tttccactgccaattatatctggatagacTCTAACATGAAAGGGGTCGCA
TCACGagcgttccgttttcgcaaattggggcaaatggggcaaagtgTGGC
GACTTGTGGCGACTTGTGGCAACATTTCACATAGGAAACACAGCGATGTC
CCTATGGCTGAATTCTTGGGGCAAATCGCGCAAagtgtggcgagctgtgg
caacatttcatataATGAACACAGCGATATCCTCatagctgaatttcttg
gggcaaacggggcaaagtgtggcgagctgtggcaacatttcatataATGA
ACACAGCGATATCCTCatagctgaatttcttggggcaaacggggcaaagt
gtggcgagctgtggcaaaattttatattatagaGAATACAGCGATTCCcc
atggctgaatttcttggggcaaacggggcaaaacgtggcgagctgtggca
acatttcatacaCTGAACATAACTCAGCGATATACCAATGGctaaatttc
ttggggcaaatggggcaaagtgtggcgagctgtggcaacatttcatataG
TGGACACAGCGATATCCTCatagctgaatttcttggggcaaatggggcaa
agcgtggtgagctgtggcaacatttcatataATGAACACAGCGATATCCT
Catagctgaatttcttggggcaaatggggcaaagcgtggtgagctgtggc
aacatttcatataATGAACACAGCGATATCCTCatagctgaatttcttgg
ggcaaacggggcaaagtgtggcgagctgtggcaaaattttatattataga
GAAATACAGCGATGTCTccatggctgaatttcttggggcaaatggggcaa
agcgtggtgagctgtggcaacatttcatataATGAACACAGCGATATCCT
Catagctgaatttcttggggcaaacggggcaaagtgtggcgagctgtggc
aacattagacataaacatAACGATGACATAGACATAGACATAAACATAAC
GATGTTCccatggctgaatttcttggggcaaagtTGTGGTATCAATTTAT
AGTAAGAAATGATGGttaatttctttggaaaaagaGGGAAACATTTCGTC
GCAGAATTGTGAAAAACGAGCGAACTAACTGTTTTGAATGTCACAGTTAC
TTTTACTAGTAATCGATGTTGTTTCGAATTGGTTAATTTAAATAGTATGT
TGAcgaagcaaaaaataatgaccatTTGAGAATGTATGCATATATTTGAT
TTAAATCTTACAATATGAACCTGATCATTATACGGAACGCACTGTAAGTC
ACTATTTTGTGAATCTAGTGATCAATCGAATTGACTAACACGGCGAACAC
ATATACTAAGCTACGTCATCTGTTCCTATCTTAAAATGTTTATAGAGTAA
ACTAATATGCTGCATTCATGCCTGCCCATGAAAGGACGCGAGATTGATAT
TTTCTgctttcaattttatttgaaaatatgacatgttaacaaaataaaaa
ccataTTTACAAAACATGGAGACATCGCTGTATTCtctataatataaaat
tttgccacagctcgccacactttgccccgtttgccccaagaaattcagcc
atggAGACATCGCTGTGTTTTATATGTGAAATGTTGCCACACTTCGCCAC
GCTCTGCcccgtttgccccaagaaattcagccacgGGGTATCACTGAGTT
TTCGATATCTAATGTTGCCACAACTCGCCACGCTTCGCcccgtttgcccc
aagaaattcagccatgaGGACATTGCTGTGTTCACtatatgaaatgttgc
cacacCTCGCCACGCTTCGCcccgtttgccccaagaaattcagccatgaG
GACATTGCTGTGTTCACtatatgaaatgttgccacacctcgccacgcttt
gccccatctgccccaagaaattcagccacgTGTTAACACTGAGTTTTCTA
TATATCTAATGTTGCCACAACTCGCCACGCTTCGCcccgtttgccccaag
aaattcagccatgaGGACATTGCTGTGTTCACtatatgaaatgttgccac
aaCTCGCCACGCATTGCCCCATTCGCCCAAAGAAATTCAGCCACGGGGAT
ATCGCTGATTTTCTGTATAGTATAGAAGAGACAGTTTATGTTAACGTTCA
ATCAATGATTTTATACAATAACGTAACACAATCATAGCATGTGGAAGAGC
ATTATCCCGTTATGTTTTACTGACTGTAGTATGATAGTATGAAATTTTCG
TATTGAGAGAGAGATTGCCGGTTGCATACATGACAATCTTCTCTTGCCGT
ACGTCAGTTTATTCCATTAGACGTGAAAAGCAACGACATTTTCAGACACA
CATATATCGCGACCTAGCCGCAATtgatcgttaattgcatcctatAGAGa
gcaatgggccattccattttatatccatacatggAGTAATCCGAGACAAA
TTTCCAGggagttttttaattttttttccaaggggttaagagttattcta
aaatttctaggGGGGGGACTTTAGTTTGtccctcactttaaggtatgaaa
agaatctttccaagggtatttttgcaaattttgtcattttccagggggta
tctacgcatttccaataattttttttgacttgagaaaaatataaaacccT
CTGTAATTTGCTTTCCtataactgggaaaaagtagtgaaaacCATTGTGC
GATtggctcgtaatcacataataactcgtacaatttgaatgcaattatat
tcgaattgcactcgttatcatgtgattacatatactaagtGTTGATTACC
AGAAAAATGTAACCAAAAAGGGCAATTATCCGagatgaaagaatgacaaa
tagGAGAATATTTTGCAATaggaaaaccaaaggaaaagttatatttaaaa
aaagagatGAATCATTTTCTacactttcatatataaaacattggaaaaaa
ggtcaaaaattatAGTATCCAAAAGattaaagtaaaaaactttcaaaaca
gggaaacaatttcataatattccaacagaatgcaaaaaagaaattcccct
aacagaagccattttataatttccaaaagaatgcaggaaaagcaaaaaaa
atttctcatacttggaaacaatcataatttccaaaaaaataaatgtCAAA
AAGGAAAAAGTTGTCATTCCTGGAAATACTAGAAACAATTTTGAGGCGAA
CATAAAAAAATGttgtgtttccggaaaccggccgggagAAAAATGTTGTT
CTAACCCGGCCGCAGACTTTTGGTTTGTCCATTTTAATCATATTACAAAA
CATATTACagattaaagaatttaaaatttatatCAAAGACTGGGTAATTA
CTGTTACACATTTGGGAGTCAGTGAAAGAAGGATTTCTTTATCCAGTCGC
AAAACATTGAATATGCGATTTCTCGGGCTTCAATCAGTTATcagtggtaa
tatttcgttctttgggcTTAAAATTCAAGCTTTTTTATAACTTCCCCCAC
CATATAAAGGGCTTTATCGTGTGTAAGCAACTCTCAACTcagcgggtgcg
acgccgggtgacggtaAGTGATTTACGTATGATGTCCTTTGTCATTTCAT
CGACATAAAATCGagcatattttttcgataagCATACTGATTAATAATGG
ACTACATGTATCTTCACTCCATATCTCGAAATCGCCATCTTCGTTCATCG
TCGGCGATTCTGTAATGTCGCCATCAATTATGATTCTGATTGTATTGTTG
AATGTAAAGGGTGGCTGTTTGAAGTTAGGtttcttttctttgaaaaaggC
AATCACATGAACTTGGTTATCACCTCCGATCTCTTTTATTTCCTGGATTA
TTCCTGTGGtgttttttatggaaaattCAGATATTGTGCTGTAGTATGGA
GTTGGATCTTTGAAGAGTATCCTGTAGATTGTCCCGGTAAAATTTGAGAT
ATGTTTGAAATGTATGTTTGTAAAAGTATGTTTTTCAGCATAATATATCG
TAGCGTTTATGGGAAAGTCATATAAAAATTTCATTAGGAATGTAACATCT
TGAAATATATTCATAGTAAAATCAAACTCATACAAATTCCATATGAATAC
ATTTGTGTCGTTTGATATTTTGCATTCACTTTTTATTTCTCTAGTATACC
TCTCGCGCCAATTGTGTTGAGGGTTCTTGGCGAGATCAAGTAAGATGTTA
TGTAGGTGAGGGTTGAAAGCTGTATGTCCCAAGAATCCATAAATGNATAA
GATGTTATGTAGATGAGGGTTGAAAGCTGTATGTCCCATGAATCCATAAA
CGACTTTTTGATTGCCCAGCCATTTTTCGCCTTCTTGGCAAAGTAGAGAT
GGCTCCGTACATGAAATAACAATGTTATGTTTTTGTCTTATTTCTTTGAG
TTTTGAGTTGAATTCCCCTTTGGCTAATACCTTTATGCGAAATTGAAGAC
TGACAAACAACAGTGTTTGCTCGATTTCATCATTGGTTTGAGGTATATGT
GATAAAAGATTCAAAATATCGTTATCATCTGTGTTCGTTATGGTCATCCA
CTCTGTCTGAAGAAATCGAACGTAATTTTCTTCTGTTTGGCGTATACAAC
GGTTCAAAATTGGTGAATAGATCcatatttcaaaacaagaatCCTCAAGC
AAAGACTTAATAAAGTATCGTAATTGCGAGGAAGTATTCTCAAGGATGTC
ATTCCTTAAGTTAAATATCAAATCGTCTTGAGTATCAAAATCGGCAATAT
GAGGaatgatggtgatatttttcCTATCACTACATAACAATGATTCCCCG
CAGACATCAGTTGATTGTTGAAAAGTGCAGGAAATCGCAAGAATTCTGAT
CAATTTGAAGACGTTCATAATGGCTTCTCTTGAAAGAAACGACAAAATCA
TTTACATCGACacgatttttatcaaaattgtaaaGAGCTGTTTAATGAGA
CACTATTGTCTTTGATTATAAGTTTAATCCATTCCTCATTATAGAAAAAT
CTGTATGTTCTGTTCTGAGATTACGTTCTTTCATctgatcattaattttt
tatttttttgtataaaagtggtaggtaaattttatattattttataagaa
caaaacgAATCATTTTCTTAGTTACCAGCTCAACACTTTGTGATTGACTC
GTCGaatttttctgactttgacCACAAAGATGTGTATCCATAAACTCTCG
ATCGTGATTGAGCTCAATTTTCGATTAATAAATTCTGTGTGCAaactttt
gttaaaaaaatgagtaaaaagggTTTTTGTACTTTTCGCCAAATTGCATC
ATCATTTATCTCTGATTTTTTTGTATCGAACAATGTAAAAGCAGAGGTGA
ATGGTAGATTCTATCCCCTTCCCCACCCTGGGGCTCAATAGGGGTAACCT
TTTTGTGAGCagctttgttcttataaaattgtcctTATAAAAGGAGACAC
TAAAACGACTACTAAACGAGTTTAAAAGGTTGCTAGTGCCTTTCGCAATC
TATATCCAACCCACTGATTAAATATCAATTGTATATCGATAGTAATCGAT
GATCGATTTCAACGATTGATTGATCGTCTAGCCTGATACTCTTGTTCTCT
TTCCTTTTTAGAACATTTAGCGTTCAAAGTGGACAAAATCGGACACCTGT
TGAGAGAATTGGGTTTTCGAACTTATGGATTTGAAGGTTCGTATGTATGA
AATGCGTAATTCAAtgggcttttctagaaaaaaaaattacccccactgtt
aaggatattgatttttcgaagtatcgaaccccctggattatccactctta
aaaatatactcaaccccctggatatcctcatttataaagatgcttacccc
tggatatcgtattttttagtTGAAAAGACACTTTGCCCCCTGGAtgtccg
ctcccttgtagatatttaaccccttGGAtgtccacttttgaacaaaaatc
gttaaccccctggatatcccatatcctcaacagggggtcacggactattt
ctggaaaagcccaatcaaaGAATTCATTAAACTCTTCTCAGTTAAAATTG
TGTTCTGGAtacactgttttttttttaaacttttattgatttattttatt
GGTTCTATTGGATGTTAAAAAAGAGTTAATTAGGACGTAATCTATGTAAG
ATGACAACCCGAACCATGaataattttcgaaattcaataATACAAGTAAT
GTTATCTTTATCTCTCTTTCTTTTATATTCTCTCCTAATTAGATCTGTTA
ACAAATTCAAGTGGCATTGAACAAGCAGTGAAATTCAGTGACATGGTTCT
CACCTGCGATCACGAAACTAAAATAATATCACGTACAACATCTGCGTTCA
CCGATCCCAAGTTACGTACTACAGCACTGTATAACGCGTTCGGTAAAAGC
GAGGAACTTCTTTCGAAGAGTTTGGCGTACATTTATTCATCATGTCAACG
CAATAAGCTGGTCCATCCGTTCCTTCTCCCCTCGTTAGTTTTACATTCCA
TCAAAGTTAGGAATGATTTGAATGGAGCACGGAACCTGTTCTGTTTCTTG
AAACAAGTCTTCAGGATCGAGTTCATCTTCGATCCTGACAAAACCGGTGA
ACAGGTAAACGTTGAATGGTTTGTAGCCTATTCATGAtttgcaccactgc
aatgacttcacgaatatatgcaacttttctggttttttttccacccaata
cgtcactttttctattgtttaagtgacgtattggatgGAAGTTCTCAAAG
TTCTCAGAAGGCTTTCCAgttgtgcatatcatgaatattagACGCCACGG
CTTTTTATCTACgcagtaacgtctattccactttgcgacatTTCCGAATG
TTTGAAgtccaggttttcgggctctgagcattcgatttttttacctcact
ttaaactttcaaaGCTACCGCAGtagcaaaaattcgaatttctgTCAGAA
TACTTGTAAGGCTGTTTTTTTCATCGTCATCTTGACGCTTATTTAGAATT
TGCCATCTTATGTTTAACTCCAGATTTCACTAAAAGGGGGAAGtgtgaaa
ttaaattttctcgtgtaagatacacgttttttagataggagcatccaaaa
tttttgaagctttctggtgttcttaacttttttagtttttaagccttaaa
atgttcttaatattttggacaTCCTAGCTTTATGGTCTTTTAtagtttct
tcttataaaaaaacgtgtaaaactCATGACTTCATGAGTCTGTTCGGTTC
CTTAAATATTCTCAAGTTTCAATTTGTGTCCCTTTATATGATAGGATTTC
AATGAAACATTACCAAAGCTGCAATCAATCGGTTTGGTTTCTATGACTAC
CGCCGATAACCAAGTGGAACTGTGCTCCAAATGTTCATTTGAAATCGACT
TCTTAATGGGTCTTGTGCAACCTTTCCTGGATGCTTATATGGTATGAAAA
CTATGTTACTAATTACCGGGcgaataaatttaatttttgtctaCATAAGT
TTAAGATGTAAGTTACTTTAATgggttaaattttgaaatttcaatcctCG
TATTCTTTTTCTAGATTGTATTGGTGAGCTTTCTACATGACACTTTTGAA
TATCCTCTGAAAATGAAACCGATGACCAAATTGCTACAACTGCAGGCTGC
CAAGTTTATCAATTCTGGtaaaatattaatattaattATAAGATTAAGGA
TCTTTACTTCGca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033355XLOC_033355Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052755-exon-scaffold_22-1491911889:145410..145678TCONS_00052755-exon-scaffold_22-1491911889:145410..145678Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:145410..145678TCONS_00052755-exon-scaffold_22-1510915933:145410..145678Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:145410..145678TCONS_00052755-exon-scaffold_22-1575043694:145410..145678Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:145859..146035TCONS_00052755-exon-scaffold_22-1491911889:145859..146035Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:145859..146035TCONS_00052755-exon-scaffold_22-1510915933:145859..146035Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:145859..146035TCONS_00052755-exon-scaffold_22-1575043694:145859..146035Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:146453..146582TCONS_00052755-exon-scaffold_22-1491911889:146453..146582Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:146453..146582TCONS_00052755-exon-scaffold_22-1510915933:146453..146582Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:146453..146582TCONS_00052755-exon-scaffold_22-1575043694:146453..146582Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:148017..148220TCONS_00052755-exon-scaffold_22-1491911889:148017..148220Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:148017..148220TCONS_00052755-exon-scaffold_22-1510915933:148017..148220Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:148017..148220TCONS_00052755-exon-scaffold_22-1575043694:148017..148220Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:149763..149914TCONS_00052755-exon-scaffold_22-1491911889:149763..149914Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:149763..149914TCONS_00052755-exon-scaffold_22-1510915933:149763..149914Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:149763..149914TCONS_00052755-exon-scaffold_22-1575043694:149763..149914Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:150447..150577TCONS_00052755-exon-scaffold_22-1491911889:150447..150577Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:150447..150577TCONS_00052755-exon-scaffold_22-1510915933:150447..150577Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:150447..150577TCONS_00052755-exon-scaffold_22-1575043694:150447..150577Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:151625..151788TCONS_00052755-exon-scaffold_22-1491911889:151625..151788Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:151625..151788TCONS_00052755-exon-scaffold_22-1510915933:151625..151788Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:151625..151788TCONS_00052755-exon-scaffold_22-1575043694:151625..151788Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:157871..157945TCONS_00052755-exon-scaffold_22-1491911889:157871..157945Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:157871..157945TCONS_00052755-exon-scaffold_22-1510915933:157871..157945Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:157871..157945TCONS_00052755-exon-scaffold_22-1575043694:157871..157945Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:158502..158863TCONS_00052755-exon-scaffold_22-1491911889:158502..158863Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:158502..158863TCONS_00052755-exon-scaffold_22-1510915933:158502..158863Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:158502..158863TCONS_00052755-exon-scaffold_22-1575043694:158502..158863Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:159554..159700TCONS_00052755-exon-scaffold_22-1491911889:159554..159700Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:159554..159700TCONS_00052755-exon-scaffold_22-1510915933:159554..159700Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:159554..159700TCONS_00052755-exon-scaffold_22-1575043694:159554..159700Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1491911889:159824..159972TCONS_00052755-exon-scaffold_22-1491911889:159824..159972Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1510915933:159824..159972TCONS_00052755-exon-scaffold_22-1510915933:159824..159972Clytia hemisphaericaexon
TCONS_00052755-exon-scaffold_22-1575043694:159824..159972TCONS_00052755-exon-scaffold_22-1575043694:159824..159972Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:145410..159972 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.78321	4.39592	2.57061	2.07456	0.00210824	0.0115417	0.131592	0.321674	0.533878	0.125848	4.75074	0.0467575	9.75866e-05	7.03863	7.98333	2.5043	9.29558	1.43971	1.2381	6.47333	0.985634	7.96994	7.48497	4.79418	6.61286e-06	3.7148e-06	0.393449	0.0497121	9.67389	16.189
Blast
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BLAST of TCONS_00052755 vs. Swiss-Prot (Human)
Match: GNPAT (Dihydroxyacetone phosphate acyltransferase OS=Homo sapiens GN=GNPAT PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 7.745e-91
Identity = 190/540 (35.19%), Postives = 301/540 (55.74%), Query Frame = 3 
Query:  216 EIKMRVLESHRVKDTIEKRKRETGIHQSQSLQEAAQIIDEIAHTFSLGTIRFMAYSLIKIIKKLFQRVLVNKEGIKQFNECAKMTPIVLVPTHSSYFDFLLASAICFALDLPLPAIVAGQDFLNIAVVNHLLRGSGAFYMRRSFASDTFYRSIFTEYVQQILCIGERPVEFFPEGTRSRSGKALQPKLGLLSMVLESCFHGFVNDVSFIPMSISYEKITEEMLYAFELVGIPKPKESLSGLLKARSVLTTDYGTVSVTFGKPMSLMEYCGKQIDGMDYVRIPRCERHLKIFGRGAQEM-KIAKYFGEKLIFQQQQNLVIYPRAVVTYIMMSQQNDVYVEHLAFKVDKIGHLLRELGFRTYGFEDLLTNSSGIEQAVKFSDMVLTCDHETKIISRTTSAFTDPKLRTTALYNAFGKSE---ELLSKSLAYIYSSCQRNKLVHPFLLPSLVLHSIKVRNDL--NGARNLFCFLKQVFRIEFIFDPDKTGEQDFNETLPKLQSIGLVSMTTADNQVELCSKCSFEIDFLMGLVQPFLDAYMIV 1817
            +IK  VL S  +   I++  +E+        +E ++I+DE++H   LG IRF A++L K+ K++F +V VN+EGI++     +  P+VL+P+H SY DFL+ S + +  DLP+P I AG DFL + +V  LLR SGAF+MRR+F  +  Y ++F+EYV+ +L  G  PVEFF EGTRSRS K L PK GLL++V+E  F   V D   +P+SISY+KI EE LY +EL+G+PKPKES +GLLKAR +L+ ++G++ V FG P+SL      ++    Y  +PR      I  + +++M         K+   Q +N+V+ P  ++  +++  +  +  + L  K   +  L +  G    GF  +  ++   E+ V  S ++    H     S   S   D       L    G SE    L+ + +  +  S  RN+L++ F+ PSLV  ++++          + F FL+ VF  EFIF P  T  +DF E    L     + +TT D  + +  K +  ++FL+GL +PF+++Y I+
Sbjct:   70 DIKCSVLNSEEIHYVIKQLSKESLQSVDVLREEVSEILDEMSHKLRLGAIRFCAFTLSKVFKQIFSKVCVNEEGIQKLQRAIQEHPVVLLPSHRSYIDFLMLSFLLYNYDLPVPVIAAGMDFLGMKMVGELLRMSGAFFMRRTFGGNKLYWAVFSEYVKTMLRNGYAPVEFFLEGTRSRSAKTLTPKFGLLNIVMEPFFKREVFDTYLVPISISYDKILEETLYVYELLGVPKPKESTTGLLKARKILSENFGSIHVYFGDPVSLRSLAAGRMSRSSYNLVPR-----YIPQKQSEDMHAFVTEVAYKMELLQIENMVLSPWTLIVAVLLQNRPSMDFDALVEKTLWLKGLTQAFG----GFL-IWPDNKPAEEVVPASILL----H-----SNIASLVKD----QVILKVDSGDSEVVDGLMLQHITLLMCSAYRNQLLNIFVRPSLVAVALQMTPGFRKEDVYSCFRFLRDVFADEFIFLPGNT-LKDFEEGCYLLCKSEAIQVTTKD--ILVTEKGNTVLEFLVGLFKPFVESYQII 583
The following BLAST results are available for this feature:
BLAST of TCONS_00052755 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNPAT7.745e-9135.19Dihydroxyacetone phosphate acyltransferase OS=Homo... [more]
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