TCONS_00052758 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052758
Unique NameTCONS_00052758
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1495

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052758 ID=TCONS_00052758|Name=TCONS_00052758|organism=Clytia hemisphaerica|type=transcript|length=1495bp
aNAAACTTTTTAGCTGGACCAAGCTCACTCCCAGTAGAggtaCTTCAACA
AGCTGCTTCAGAAATGCTGAATTATAGAAAACAGGGCTTTGGTGTAATGG
AGATGAGTCATCGTTCTAAAGAGTTTGCTGAAATTTGTACAGAAGCAGAA
GCTGATatgagaaaattgatGAACATGCCAAAAGAATACAAAGTGTTGTT
CTTACAAGGAGGTTGCACTGGAATGTTTGCTGCTGTTGCAATGAACTTCC
TTAAAGGCAAAGCTGACTACATATGCACTGGAACATGGTCAGAAAAAGCT
GCCAAAGAAGCTGAGAAATACGGTCAGGTCAACTACGTCGTTCcaaaacc
agaaaaatatttgGGAGTTCCATCGACTGACCAGTGGAAACTTTCGCCAG
ATGCTGATTACGTTTATTATTGTTTCAATGAAACTGTTGGAGGAGTAGAA
TTTGAAAACATCCCTGAAACAAATGGTGTTCCATTGATTGTTGACATGTC
CTCAAATATTATGACAAGAAAAATCGATATCACAAAATTTGCAGCCGTCA
TCGCAGGGGCGCAAAAAAACCTGGGGCCGGCTGGTTTGACCATGGTTATT
GCACGTGAAGATATGTTGGGAAAGGAACAAAAGATTTGTCCAACGGTTTG
GAACTTTAAGAAACAAGCTGATGCGGATTCGAGGCTGAACACACCACCTT
GTTATTGTATTTACATGACTGGTCTTGTCTTCAAGTGGATTCTGAAGAAC
GGTGGGGTCGATTATTTCCACGATTTGAATAccaaaaaatccaaactttt
ATACGATACAATCGATGATTCTCTCGGTTTTTATAAACCGATTATCAACG
AAGGTTCTCGATCGCGAGTCAACATCGTTTTCCGTGTCGGAGGACCGCAA
GGAGATATCGATGTCGAGAAGAAATTCGTCGAGAAAGCAAAAGAAAATGG
TCTGGTTGGTCTAAGTGGCCACCGATCTGTTGGGGGATGTCGTGCTTCGC
TTTACAATCCTGTCACTCTGGAACAAGTTCAAAAACTATGTAAATTTATG
AACGATTTTCAAATGCAAAACCAGAACTAAACTTTGGTATATCCTTGACT
GGCAGAAGACATTGTTgcactttttctgaaaatggttTCTGCAAGGAGAC
AtccaagattttctttttttatacaaGACGAAATGGAGgatttgaaaaga
aacaaaGGACAGTCAAACTGCGAGAATTTGGAAGATTGTAATGTGTGTGC
GGGAAGGTACATTTTAATACTATTTATAATATTTAGATTATTTTAACAAA
ATGTCAGCATATATTTTAGGCAATTTTATGACAAATTTACAATATCTATC
TTGTAATTCAAATCCTTGACTATTTATAGTGCTTTATGCTAACATAGCTT
TTTTTTCTTGCAATTTATACCGATATTTGTTAGGTAATTTTTAATTGTGa
catttctttttaaaacttttcaataaaatattttaaaaatcaacC
Run BLAST on NCBI

transcript from alignment at scaffold_22:165216..173603+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052758 ID=TCONS_00052758|Name=TCONS_00052758|organism=Clytia hemisphaerica|type=transcript|length=8388bp|location=Sequence derived from alignment at scaffold_22:165216..173603+ (Clytia hemisphaerica)
aNAAACTTTTTAGCTGGACCAAGCTCACTCCCAGTAGAggtatgttgttg
tttttgtttttgaaagtcataaatttcatttatttttcctaAATTGAAAA
CACTTTTCTCTTTTTCCTGTCCACACCCCAGTTTTACAGGCAAATATTTA
GAGCTACAAGGAAAAGTATGTTtacacaaaaatttgaatttgaagtgTGT
AGAAATTATGACGAAAGTCTAAGGAATCACTGCAATTGACAAAATTCATT
GTTTTGCTAATGCCCAGACAGACAATCTCCTATTGAACCGAATTAACGAT
TGCGCTAGTCAAACCAAATCAACCAATTGAAATTTGATAACCAAACACAA
TTTGTTATTGGTTGAATGTCGGGTACTGCtgggaaacaaaaattttaaat
tttgtaggAATTAACTTAATTTGTTTTCTGAAATATATTGCTAGAGAAAT
TTGTGGTTTGTTGAcgggctcccccaggggctgaCGTGACATGTGAATGA
GCATTTTTTCTGCCATGAACAtttgaattagatttttttcaacacCTGTA
CGTGAATGGAGATATCAGTCATGGACCATATCAAAAGTAGCCAAAAGTAA
AAGATGATAAGGGGCTTTGGCAAACCAGATTAATGCAGGGTCCGTGCCAC
CTTAGACTGGGGCAAGGGGCCATGATCcctcacttttttgcaaaaaatag
aTGTTTCTAATTCCATGATTTATATACCTtgagggaacttattttggtga
gaactaattttggcgaaattggCGAGCGAACTCGAAATTCACCAAattta
gttcccaccaaaattaattttttaggtaattcgccaaattaagttcccgc
cagaattttaaaaaaatcgttgattcgccaaaataagttctcaccaaaat
taaaaaaattcctggattcaccaaaattagttctcgccaaaattagaaaa
aaaatttaaatcaactgtttgtcaaaattagttctcacTTTTAAAAGGGC
ACTTTAACCTTAGCCCAATTTGAATTAAGGTGCGGACCCTGTTATGTTAA
CACCATATTAACTTGGAAACAGAGGGGAGGGTGTTTACTTTTTCAATAAC
TCAATttcagtagttttgaaaattcaatgaacattattaaaacattttaa
agatcAGCCTCATAGATAATTATGCATCTGCTCTTTCAAGTATCTAGGCg
ttctaaatttcaaaattatttcaaaattagcACGTGGACGCATTTGTGTT
Gcgaattgaattttcaaaattttttagcaaaagttaaaacgcaaaagtga
aatttctttCTGAAAAAAGTTGCAAAACTTTCCTCTTCTACAAAAATTTT
ATCCCTCAATTGCTGACATGAACACAATTCATGAACATAAactgaaattc
aagaaaattacCTAAAGTTTTACAATAATGGTTGTTTGACTGCTATAAAT
GAAAAGAACTTTTTTCACCCTATGGATAAGAACTGAATAAGaacaaagtt
aaaaaaaataagaacagctgagCCTCAGAAAACTTTactgttttttatga
aaaaagtctATGTTATACTTATTTAGGCTCTAGAATACATTTAAGCTCTT
TCAATCCAATGCAATGCACTtccttttaatattttttgtttttatttttc
aggtaCTTCAACAAGCTGCTTCAGAAATGCTGAATTATAGAAAACAGGGC
TTTGGTGTAATGGGTATgtcaaagtttaaaatttcaaatttttacatata
tctttttggaaaatttacaATCATTATTTATGATCAATAAAACCCTGTAG
AAGAAAATAGTTTAGGAGGTTAATTCAGAAAGACAAGCTATTGTGAAAAT
CATAATGTTCAAAATTCGGTTTTTGAATGTTTGCCTCACGAATGTTTCAT
TTTAGAAACTCAAACATGATATTTTTGAACGtcctttgatttttcatttt
tcattttacagCTGACTTTGTGGCTGGGTACACTGCCGAAAATGTAGCCA
CCTGAAACACGTCTGCTTAGAATTGGCTCTATGGTAATGTTGTATTGAAT
ATTTCTTGTTTTACAGAGATGAGTCATCGTTCTAAAGAGTTTGCTGAAAT
TTGTACAGAAGCAGAAGCTGATatgagaaaattgatgtaaGTGGGGTgac
ttttttttctgttttatggAAATTCCATTCGCTATAATTTAGTTTGCTTG
GTTGGGCGAAGAGCTATTtttcttatcaaataaaaattgaatattgcatt
ttttttttatttcaagggaTCAATATAATATATTGTGGCATTTTAAATCT
TAATATCATAGTTTTCTTTTATAATTGTAATATTTCTTATCCCTTTTTAG
GAACATGCCAAAAGAATACAAAGTGTTGTTCTTACAAGGAGGTTGCACTG
GAATGTTTGCTGCTGTTGCAATGAACTTCCTTAAAGGTTGGtagtttttt
ataaattttaccacctttgcttgaaattttaaaattaacttcACAAAGTT
TAATCTTGTATAAATTGTTTCCAAATGGTTTCATGTTATAGAGCTATATA
CTTAAAAGTTCCCAAaccgaataattttgaaaaatagattcTTTTATGGT
ACACTATGTATATATTGGGTCACTTCTGTATTTTAAATctatatataccg
ggtgcaccaaaaaaaaagtatacaactttgtcgatatattgtgagcttca
ggattttaGCGGATgctttaacttgaattttgagctatcgcacattaaat
ttgaaaaagcagttcgaaagttattttcaaaaaactgactttttttccag
gtcgaaatttcaaaaactcattaaaaacagcaatcacgctataaataaga
caaaatgacaaaaacgcaatttcattgtttttttattcctttttctctta
tcttaaattttgcaaacagtttctccatcttatttgcacgtcatgaacat
ttccaacaccagcaaactAAATGCAGACACAAGTTCTTTGAGCTACTATT
CGAGGAATAGTGATctatttgtttcaaaaattttcacataGCACACACAT
AACATCGAAACCTCTCTTGaagatttccaaaaaagtttttcagcctttct
aaaaatattatcccacatgggaatagcttgttttaccatattatTAAATT
CTGCAACGAGTTTTGATGAgcacagttgcattttttggtatttttatgtg
taaagaaggtaatgttaagagaaaagtttgctcgctgtttttaatgattt
ttttaaatttcgacctggaaaaaaagtcagttttttgaaaataactttcg
aactactttttcaaatttaatgtactgtatgatagctcaaaattcaagtt
aaagcatcctctacatgtttttttttttatacgcAAGtttatgccccttg
gtcaggctcgagtatgcttaagctttcaaagcatccagacatagaatatg
cttattatatgcttaagaattattatgcttttgattcacccaaccaaatt
ttttagtaaaatctttaaaattttgttaatattcgattcaaaaagcattt
aaatttttgagtagtggaatgtggctagccgtggaatgtattttttactt
gaccacttgcaaacctttttgaataGACAGAGATTGgctacttgaaaaat
atttcaggctagcGCATATGCTtgtgttatgcttaggaaatctgcaaatc
tgagccttcatatgcttataagcgttatgcttattaaaaaaaaacatgta
tacaataaaaaaagaatgaacaaaaaagaagctcacaatatctcgacaaa
gttgtatacttttttttggtgcacccggtattttattttaaacttgCATC
ATCTATGTCTCTTtctgaaacaatttttttgaagaggTCGGTAACACTGT
ATAATGGTATTAcagattaaaaaatattttttcacaatTATTTCTCATGA
TTTATTAGGCAAAGCTGACTACATATGCACTGGAACATGGTCAGAAAAAG
CTGCCAAAGAAGTGAGTAAATAATAATACCTTTATATacattgtttgttt
gttttgaacatTTCAGTAATCAAAATCTGTAGTTCTTCTATAAAAGGCGA
GTTTCTAATGTCCTAAGCTAACAATAAAACTTGTTTCCACTCAGTTAAGC
TCTGAGAATAGAAATATAATCCGTCAATCAATTGATAGCACGCGTAAGAG
TTTTGAAGAAATAACATAGAGGGTTTCAGAATTTATCTGAGAAAGATGTC
CAGAAAGAAGATGGTGATTGATAAATCTGTTACTTGGGGCTAATTCCTGT
AATGTCTCGGACCTTGCAATTCCTTCTCACTTATCTTTTTCCTGACTTCT
GAAACTTTCTTTGATGATTCTTCACTCATTTCCAGTGATGTTGAACGAAT
TGTGAGTTTTCAGAAAGAAATAATATTGAGAGACATTATAGGTTTTAGTC
GCAACTAATCTGTTCATCTCCTATAAAGATTTTCAACAGCCCTGAAATAT
TATTGCTGTATCTCGAAGCTGTGCAGACTGTCACTTTTTATATTAAATGT
ATCGAATATTTAATCtgactgttttgttttttttatctctAGGCTGAGAA
ATACGGTCAGGTCAACTACGTCGTTCcaaaaccagaaaaatatttgGGAG
TTCCATCGACTGACCAGTGGAAACTTTCGCCAGATGCTGATTACGTTTAT
TATTGTTTCAATGAAACTGTTGGAGGTAAATATTCATTGATGTTTTGTTT
AACAATGTACTGTATAGTACTAATTTGCTCATGATAGGCCATAAGTGATA
CTTTGGAAATATCCGGTCAAATTGTTTGATCTAGACAATAATGGACACTG
TTATCCTGAAGGGCTCATTACATACACAAATTCTGTCGATCGATTTCGGG
AAATCTCGTGTAAAAACTTGCCTCATTGCAACGATTTCTCATTCTGTGAA
ATTATTGCAGATCTGTTTTGCTAAACTTTTCCTGCCATACACAATGTAGA
TGGAGGAAAGCATTTTTTTTCTGTAGAGTATAAAAATTTACTGAACATTA
TATTTACAATCTCATAGTTTACCGGTTTACCACTGCTTGTCTGGTAGTAA
ATTTTCCCGTCGATAATATGTTGCTTCTTATCAGTTAAgataaatttaat
attttgattCAAAAACTTATGTTATATTACATcaaatgtttccaaatttt
agGAGTAGAATTTGAAAACATCCCTGAAACAAATGGTGTTCCATTGATTG
TTGACATGTCCTCAAATATTATGACAAGAAAAATCGATATCACAAAATTT
GCAGCCGTCATCGCAGGGGCGCAAAAAAACCTGGGGCCGGCTGGTTTGAC
CATGGTTATTGCACGTGAAGATATGTTGGGAAAGGAACAAAAGATTTGTC
CAACGGTTTGGAACTTTAAGAAACAAGCTGATGCGGATTCGAGGCTGAAC
ACACCACCTTGTTATTGGTCAGTGGCTTTAATATGTTTCACATTTCCATT
GATGAAAAGGGTTtacataaaaataaattaaggGCTGGACTTTAGTTTAG
CTTGTTTATCATGCCTTATTGTGTTCCCAAggaactttatttttatttaa
gttTCTTGGTGTTCCTAATAATTTATGAACATTATGATTGGACATTCATC
TGTTTCATTCAGTTCAATATTTTATACAACTCAAGATTATCTTTTAAACG
AGCCTAAAACCGATATCTAATATTCAGATTCTATCGAAAGTTACAGCTTT
TCTTTATCTCCGTTGCAAATTATATTAAGACAGACTTTAGACATTCATTT
TTTCTATCATTTCAGTATTTACATGACTGGTCTTGTCTTCAAGTGGATTC
TGAAGAACGGTGGGGTCGATTATTTCCACGATTTGAATAccaaaaaatcc
aaacttttATACGATACAATCGATGATTCTCTCGGTTTTTATAAACCGAT
TATCAACGAAGGTTCTCGATCGCGAGTCAACATCGTTTTCCGTGTCGGAG
GACCGCAAGGAGATATCGATGTCGAGAAGAAATTCGTCGAGAAAGCAAAA
GAAAATGGTCTGGTTGGTCTAAGTGGCCACCGGTAAGGTTTGATTCGTtt
tgtttggtatttttgtactttttcttTCAAACCGCTGTTGTATAAAACTT
AACCAACACTGATAAGGGAAATTTTGATATAAAGTTTTAAAGATTAAACA
AGGAAATGTTTTGAAAGCCGGTTTGTTTATAGCCACTACATAAAAAATAG
ATTTCCCTAATATTTTGTTCACTTTGAGAAAGGATGGTCATGactccccc
ggggggggggggacttaagcaaaaatgggtgctgggtatgtgtgaacggt
aagggtcggttttttcacctttcaaagtctctctaagggttggaaaattc
acgatttctaggaaattttttggatttagagtgaataaattagaaaaatg
tctctgtaagggtagggtatttttcaaatatcgaagaaaattctaagggt
caccttttcagcaacaatcagtctctctaagggtcggctTTTGGAGGTCC
CATCCGCACATACCACTCATCCACCAACTCAGACATGACTCCGGTTATAA
GACAGTCTGATCTAGTGAGGATTTTCATTACAAACTACTGATCACTTAAT
TTAAAATGGCTGTTTTGTCTGAACTGTCCGTAATCAGCTGTAATAGCTGT
TAACTTGAGAGGATTACACTAATTAGCATGTCAAAGCCATTTGAAATGAT
CTCGTTTTGTGATGTAATTTTCATCAAGCATTTATATTTAACggataaaa
agtttttttactggACGCATGGCATTGGACTTTGAACTTTCGAATGTATA
GTATTATGCACCTTTAATACATTAGAGCCAATTCGATTCATTAGGAACTC
TCCTCTATTGCTACAATGAGATTTATATCGTCCCATAttttaatttctat
tttctgaTGCAACATTTTTACACATTGCCCTTTTCTATATTATGTAATTT
TACTGCAAGTTATCTCATCCCGAGGCAAAGATTATTATACTTTAAGTTTT
TCCAGTAATCACAGTGTTATTAAAATAAGCTTCATCATCTTTAAGGCTTt
gttttttcgcgttggtgcaatgcaacatgctccatcccaccaacctgtaA
CGCTTTCACCTGTTTCCACCCCATTTTTATTTCTACCATAGTCACAAGAT
AATTTTCTTGTGACTATGTTTCTactaataaaagtgaaatctcacttttt
gtcccataaaacaaaaaataaatcataggACACGCACTATTTTTCTTATG
TTGGTGGAATAGAGCATGTtacattgcaccaacgcgaaaaaaaacttctc
gtgtccccaagcctttacaaGCTGAATCTTCCAGTTtataaatcttcatt
ttttgtatGCCTGTGAATGTTCCAATAAAAACAGATTTTCTATACTTTAT
GCATCGTCTAAACCTTTTGTGATGGGTCTCCCGGGAAAATACGAAAAAAA
TAAGTTCTTGCCcagaaaaagttttgattttcaaattagacaattttcaa
atatttttggtcaattttaaaTTCTAAAGTTGCTgaattgattattttta
tattcTCCCTTTCACAAATACAACAAATAAGAACAGAAAGTGGCTCTCAT
TTCCTAACGCCTATTTTAGAGACACAAGACCTAGCCAAAGAGACCTGATA
GTTTTCCCGGATCTTGCTTGTCTGTAAATAGATTTCAAAGTTCATTACCG
TAGAGTACTGCACTGTTTTATACGTTAGATACACTCCGGTACAGAGTATG
GTCTTGCAACAACACATCAGTTTATTTTGTAATGTGTTTTAATCTGATCA
TTAATTTATCTTTTTAGATCTGTTGGGGGATGTCGTGCTTCGCTTTACAA
TCCTGTCACTCTGGAACAAGTTCAAAAACTATGTAAATTTATGAACGATT
TTCAAATGCAAAACCAGAACTAAACTTTGGTATATCCTTGACTGGCAGAA
GACATTGTTgcactttttctgaaaatggttTCTGCAAGGAGACAtccaag
attttctttttttatacaaGACGAAATGGAGgatttgaaaagaaacaaaG
GACAGTCAAACTGCGAGAATTTGGAAGATTGTAATGTGTGTGCGGGAAGG
TACATTTTAATACTATTTATAATATTTAGATTATTTTAACAAAATGTCAG
CATATATTTTAGGCAATTTTATGACAAATTTACAATATCTATCTTGTAAT
TCAAATCCTTGACTATTTATAGTGCTTTATGCTAACATAGCTTTTTTTTC
TTGCAATTTATACCGATATTTGTTAGGTAATTTTTAATTGTGacatttct
ttttaaaacttttcaataaaatattttaaaaatcaacC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033357XLOC_033357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052758-exon-scaffold_22-1491911889:165216..165254TCONS_00052758-exon-scaffold_22-1491911889:165216..165254Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:165216..165254TCONS_00052758-exon-scaffold_22-1510915933:165216..165254Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:165216..165254TCONS_00052758-exon-scaffold_22-1575043694:165216..165254Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:166868..166928TCONS_00052758-exon-scaffold_22-1491911889:166868..166928Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:166868..166928TCONS_00052758-exon-scaffold_22-1510915933:166868..166928Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:166868..166928TCONS_00052758-exon-scaffold_22-1575043694:166868..166928Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:167282..167351TCONS_00052758-exon-scaffold_22-1491911889:167282..167351Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:167282..167351TCONS_00052758-exon-scaffold_22-1510915933:167282..167351Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:167282..167351TCONS_00052758-exon-scaffold_22-1575043694:167282..167351Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:167566..167651TCONS_00052758-exon-scaffold_22-1491911889:167566..167651Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:167566..167651TCONS_00052758-exon-scaffold_22-1510915933:167566..167651Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:167566..167651TCONS_00052758-exon-scaffold_22-1575043694:167566..167651Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:169174..169226TCONS_00052758-exon-scaffold_22-1491911889:169174..169226Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:169174..169226TCONS_00052758-exon-scaffold_22-1510915933:169174..169226Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:169174..169226TCONS_00052758-exon-scaffold_22-1575043694:169174..169226Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:169808..169940TCONS_00052758-exon-scaffold_22-1491911889:169808..169940Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:169808..169940TCONS_00052758-exon-scaffold_22-1510915933:169808..169940Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:169808..169940TCONS_00052758-exon-scaffold_22-1575043694:169808..169940Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:170418..170682TCONS_00052758-exon-scaffold_22-1491911889:170418..170682Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:170418..170682TCONS_00052758-exon-scaffold_22-1510915933:170418..170682Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:170418..170682TCONS_00052758-exon-scaffold_22-1575043694:170418..170682Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:171031..171297TCONS_00052758-exon-scaffold_22-1491911889:171031..171297Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:171031..171297TCONS_00052758-exon-scaffold_22-1510915933:171031..171297Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:171031..171297TCONS_00052758-exon-scaffold_22-1575043694:171031..171297Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1491911889:173083..173603TCONS_00052758-exon-scaffold_22-1491911889:173083..173603Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1510915933:173083..173603TCONS_00052758-exon-scaffold_22-1510915933:173083..173603Clytia hemisphaericaexon
TCONS_00052758-exon-scaffold_22-1575043694:173083..173603TCONS_00052758-exon-scaffold_22-1575043694:173083..173603Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:165216..173603 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.3907	32.3862	98.3797	107.106	192.177	74.2854	248.674	195.691	275.824	271.437	231.937	308.614	15.7188	9.64571	15.0852	23.1897	11.0947	10.2025	23.4274	23.7184	20.6249	23.3011	50.04	36.313	6.34146	6.17134	184.269	124.254	43.6315	30.5688
Blast
[Close]
BLAST of TCONS_00052758 vs. Swiss-Prot (Human)
Match: SERC (Phosphoserine aminotransferase OS=Homo sapiens GN=PSAT1 PE=1 SV=2)

HSP 1 Score: 367.466 bits (942), Expect = 1.341e-122
Identity = 178/361 (49.31%), Postives = 242/361 (67.04%), Query Frame = 1 
Query:    4 NFLAGPSSLPVEVLQQAASEMLNYRKQGFGVMEMSHRSKEFAEICTEAEADMRKLMNMPKEYKVLFLQGGCTGMFAAVAMNFLKGKA----DYICTGTWSEKAAKEAEKYGQVNYVVPKPEKYLGVPSTDQWKLSPDADYVYYCFNETVGGVEFENIPETNGVPLIVDMSSNIMTRKIDITKFAAVIAGAQKNLGPAGLTMVIAREDMLGKEQKICPTVWNFKKQADADSRLNTPPCYCIYMTGLVFKWILKNGGVDYFHDLNTKKSKLLYDTIDDSLGFYKPIINEGSRSRVNIVFRVGGPQGDIDVEKKFVEKAKENGLVGLSGHRSVGGCRASLYNPVTLEQVQKLCKFMNDFQMQNQ 1074
            NF  GP+ LP  VL +   E+L+Y+  G  V+EMSHRS +FA+I    E  +R+L+ +P  YKV+FLQGG  G F+AV +N +  KA    DY+ TG WS KAA+EA+K+G +N V PK   Y  +P    W L+PDA YVYYC NETV GVEF+ IP+  G  L+ DMSSN +++ +D++KF  + AGAQKN+G AG+T+VI R+D+LG   + CP+V  +K QA   S  NTPPC+ IY+ GLV +WI  NGG      L++ KS+ +Y+ ID+S GFY   +   +RS++NI FR+G  +GD  +EK+F++KA E  ++ L GHRSVGG RASLYN VT+E VQKL  FM  F   +Q
Sbjct:    9 NFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMHQ 369
The following BLAST results are available for this feature:
BLAST of TCONS_00052758 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SERC1.341e-12249.31Phosphoserine aminotransferase OS=Homo sapiens GN=... [more]
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