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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052774 ID=TCONS_00052774|Name=TCONS_00052774|organism=Clytia hemisphaerica|type=transcript|length=680bp
AGAGAACATAACTGTACTAGTAGAAATGTgatcgaaaataaaaataagac
ctGAAAAAGCATCGAGGAGTCGATCCATGTCCCCTGAAGACAAACAAATC
ATATACGTCGTGTCTGGAACCTTATCGTTAGTCCTGGTCATCATTATTGC
CGTGGTACTATCAAGCATCTATTATCGACGTCGTCAAGCATTACTTAATA
CTGAAACGGCTGAAGCGTCATCGACGGGACACGACGAAAACAAATCAAGG
AAGATCTCATTACATCAGGTCAATCACCAACGTAAAATCTCAAGACAAGA
GAATACTTTCCACATGCCAGACCCTCGTTTCGAGCCAGTTTTACATCGAA
CGACAACCAATGGAATGATTGAGAACAATATGTTGAAAAACAATTTGTGC
AAAAAAGCATCACCATCTATAAACAGGTTTGAGAATAAAACTTTTATTGA
TGATgaagaattttaaaaatagtGATTTGTGAATAGACGTTTTAAgaaca
ttaaaaaattttaaggcCTTCagacgttcttaactttttgagattatgtt
cttattttcattatcTTGTGAATATTTCTGTACACATCTTAAGAAATCGG
TTATGGTTTAATTAAAGTCCTTGTTTTtagaccatcgaagccttacccag
ctgacacacaacgttctttcgaCGTTTATA Run BLAST on NCBI transcript from alignment at scaffold_22:95743..97669- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052774 ID=TCONS_00052774|Name=TCONS_00052774|organism=Clytia hemisphaerica|type=transcript|length=1927bp|location=Sequence derived from alignment at scaffold_22:95743..97669- (Clytia hemisphaerica)
AGAGAACATAACTGTACTAGTAGAAATGTGATCGAAAATAAAAATAAGAC
CTGAAAAAGGTGAAAGAGGTCAAGCAAGTTAGCTTTTTGGTATAATGAAT
CCAATGGGCACAAACGTCTTTTGGACGTCTAGTATACGTTTCTAGAACGT
CCAAAGGTCTTAAAGCCGTCCATTGAATGTCAATAAGACGTTGCGTGCCC
ATAAGGTTATTTCTACATTGTGATGATTAAATTGGTTATGGCATAAGTTG
GCTCCACTCTTTCTTAACAAAACACACAATTTCTCATACATGAACATTTT
CTTTTAGCATCGAGGAGTCGATCCATGTCCCCTGAAGGTAATACTGTTTT
TAAATTATTTGAATTCTATTCTAAATTATTGTCCTAAGATAGTGGGCTTG
TTTCCTGTCATACTTAATATTAAGAAAATAGTCATAATACCAGTGACATA
CTACGTACAGTATTTTACCAGCTGGTGTTTGACATCAAAAGTAGGTCCAT
CTAACGTCTATAACGTCTAGAGAATGTTATGTACGTTAATGGGCAATAGC
AGTGCGCGGAGAATTAATAGAATAGGATAGTGTACTTCAAAATAAAAAAT
AAATGAAAGCCAAAACCTGGGGGGGGGTACTTAGGCAAGTGAAAAGTACG
GGTATGAGTCACCCTTAGGGGTGCCTTTTTGGGACCTAAAAGTCCCTGTA
AGGGTTGGAGAAACCAGAAAATTAAATTTCAGTCCCACTAAGGTTCGGAA
AAATAGGAAATTTCTACTTTTTGCTACTTGAAAGTTCAAAATTTGGTCAA
ATTAGTCTCTACCCCCGGCCACGACTGACCTTACCTAATCCTGCCCCCTC
TCTTACAATGTGCAACCAACATGGGATAAATGAAAATAAACTGAAAATTC
TATTTTACAGACAAACAAATCATATACGTCGTGTCTGGAACCTTATCGTT
AGTCCTGGTCATCATTATTGCCGTGGTACTATCAAGCATCTATTATCGAC
GTCGTCAAGCATTACTTAATACTGAAACGGCTGAAGCGTCATCGACGGGA
CACGACGAAAACAAATCAAGGAAGATCTCATTACATCAGGTCAATCACCA
ACGTAAAATCTCAAGACAAGAGAGTAAGTTCTCGTTTTTTTGAATAATGG
GCTTTTCCAGAAATAGTCCGTGCATCCCCTGTTGAGGTTATCGGGTTAAA
TATCTACATATCTACAATGGAGCAGATATCCAGGGGTAAAGTGTCTTTTC
AACTAAAAAATACAATATCCAGGGGTCTTTACTAATAAAGTAGGCTATCT
AGGGGGTTTGATACTTCGAAAAATCAATATTCTCAACAGTGGGGGTAAAA
GTTTTTTCTGGAAAAGCCATCGCGGAGAATGCGGTTTGAATTTCTGTTCG
AAATTCGAAAGACGGAGTTGATTTCCCTTTTTTTGTTGAGTTTTCTTGGC
TTTATCCATTAAAGGAGTCTACACAATATAGACACTTCAAGATTTAGTCT
TACTAGCATATTTTAGCCATATTTTTCAGTATATGTCTGTTCTCTTTAGA
TACTTTCCACATGCCAGACCCTCGTTTCGAGCCAGTTTTACATCGAACGA
CAACCAATGGAATGATTGAGAACAATATGTTGAAAAACAATTTGTGCAAA
AAAGCATCACCATCTATAAACAGGTTTGAGAATAAAACTTTTATTGATGA
TGAAGAATTTTAAAAATAGTGATTTGTGAATAGACGTTTTAAGAACATTA
AAAAATTTTAAGGCCTTCAGACGTTCTTAACTTTTTGAGATTATGTTCTT
ATTTTCATTATCTTGTGAATATTTCTGTACACATCTTAAGAAATCGGTTA
TGGTTTAATTAAAGTCCTTGTTTTTAGACCATCGAAGCCTTACCCAGCTG
ACACACAACGTTCTTTCGACGTTTATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052774-exon-scaffold_22-1575043694:97611..97669 | TCONS_00052774-exon-scaffold_22-1575043694:97611..97669 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1575043694:97333..97362 | TCONS_00052774-exon-scaffold_22-1575043694:97333..97362 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1575043694:96547..96759 | TCONS_00052774-exon-scaffold_22-1575043694:96547..96759 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1575043694:95743..96120 | TCONS_00052774-exon-scaffold_22-1575043694:95743..96120 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1510915933:97611..97669 | TCONS_00052774-exon-scaffold_22-1510915933:97611..97669 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1510915933:97333..97362 | TCONS_00052774-exon-scaffold_22-1510915933:97333..97362 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1510915933:96547..96759 | TCONS_00052774-exon-scaffold_22-1510915933:96547..96759 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1510915933:95743..96120 | TCONS_00052774-exon-scaffold_22-1510915933:95743..96120 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1491911889:97611..97669 | TCONS_00052774-exon-scaffold_22-1491911889:97611..97669 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1491911889:97333..97362 | TCONS_00052774-exon-scaffold_22-1491911889:97333..97362 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1491911889:96547..96759 | TCONS_00052774-exon-scaffold_22-1491911889:96547..96759 | Clytia hemisphaerica | exon |
| TCONS_00052774-exon-scaffold_22-1491911889:95743..96120 | TCONS_00052774-exon-scaffold_22-1491911889:95743..96120 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:95743..97669 - |
Blast
The following BLAST results are available for this feature:
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