TCONS_00052792 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052792
Unique NameTCONS_00052792
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052792 ID=TCONS_00052792|Name=TCONS_00052792|organism=Clytia hemisphaerica|type=transcript|length=1196bp
TGGCGATTTTGTAAGTGCAGTCTGCGTGGTTTTATTTTTCTGTATACATT
TGAAACGTTACCAAAACATAAGATAAGAACAAAGTGATTGTCGGATTTCG
ACCTTTGAAGAATGATGAATAAATCATTTGATCGTAAACGCGCAAGAAAA
ACAAAGCAAGAATTGGTTATCGAGAAGAAATTAAAGTTCTTCGTTATGTC
TGTTGCTTTCAACGGATCTGATGGTCATAAACTTCCAAGTTTAAATGATT
TATATGAAGATAGCGTGATAAGAAAAGAGGATCCGTGCAATTTATTGGAT
AAAAAAGCCCGCTATCCTTGTGAGCCCACCCCGCTCCGTGTAAGCGCTTG
CTTAATGAGATCAATGACAAAACAAAACGATACACCTCCCCCAAAGTCAT
ACAGGACCCTTTCAAGTCGTCGACGAAACACGCAGCGACGCAATAACACC
AGTGTCGTTGTTACAGGGCGCCATTCGAAGGAAAATTCAACCACTTCAGT
TAAAGCACCGGGTAAAGTTGAACCACATGTTTTAAAACAGGACCATTCGC
AAATTCTtgatgaaataaataaactctTTCAAAATAATTCAGCTCAAAAG
AACGTCAGCGTTTTGAAACAGTTGTTATTACGTAGCGCTTCTGAGCAACA
GACGACTGCTTATAATCAGGCGAATCAAAAGAGACTGCCAAGCGTgatta
aagaagaaaataagaatgTTGGAATAGGTAATGACGAGGTTAAGAAAACT
GAAAGTTTACGAGAAACAGTATGGAAGAACTCTAAAGATCAAGAAAGTGA
CGAGTTGATAGAAACAGAGGAAGAATCGGTTGAAATGAAAGTCGTTAGCG
AGGAAGAGGTCAAAAATCAAATCGAAacacctgaaaatgaaaatcaagat
gAATTATCAGAGGAAAATTCCCGAATGCaagattgaaaaaatttctgtcA
GCATAAAACTTATTGTTTTCATGTGCTTTATTATCGTACTTTGTTGATTT
GAACCCTTGGTCTTCCTTttatacattaaaggaagaaattttggcggatg
gccaaaaaagttttttcagaaggaatttaatttggcggacgaaggacatt
tttgtccaaaaatcgccattaaaaaaggaaaaatctgttttaaagcctga
aatagcacacatttgggggaataaatagagcaacttaaatttggcg
Run BLAST on NCBI

protein sequence of TCONS_00052792-protein

>TCONS_00052792-protein ID=TCONS_00052792-protein|Name=TCONS_00052792-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MMNKSFDRKRARKTKQELVIEKKLKFFVMSVAFNGSDGHKLPSLNDLYED
SVIRKEDPCNLLDKKARYPCEPTPLRVSACLMRSMTKQNDTPPPKSYRTL
SSRRRNTQRRNNTSVVVTGRHSKENSTTSVKAPGKVEPHVLKQDHSQILD
EINKLFQNNSAQKNVSVLKQLLLRSASEQQTTAYNQANQKRLPSVIKEEN
KNVGIGNDEVKKTESLRETVWKNSKDQESDELIETEEESVEMKVVSEEEV
KNQIETPENENQDELSEENSRMQD
Run BLAST on NCBI

transcript from alignment at scaffold_220:51590..60704+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052792 ID=TCONS_00052792|Name=TCONS_00052792|organism=Clytia hemisphaerica|type=transcript|length=9115bp|location=Sequence derived from alignment at scaffold_220:51590..60704+ (Clytia hemisphaerica)
TGGCGATTTTGTAAGTGCAGTCTGCGTGGTTTTATTTTTCTGTATACATT TGAAACGTTACCAAAACATAAGATAAGAACAAAGTGATTGTCGGATTTCG ACCTTTGAAGAATGATGAATAAATCATTTGATCGTAAACGCGCAAGAAAA ACAAAGCAAGGTAAACATTGGAGAGTCATTTTggtttgtttagatttttt gctcaaactTTTGGTctcatattttattttctcagatTTAACTGATCAAG TTGATACCCGTGGAGGAGGGTATTGGTGTTGCAAGCTGACGGggtgtgcc gcccgactttcgacccttatGGACCCTtagcaaaggaaaattttgtgaat tttactaCCCTTATCCACCTTTATTGGGActatttgaccaaattttgatc tttctcTGGGAGCAAAAAGTTGATATTCTCTTACTTTTCTGACCCTtcgt gggactgaagtttgattttcggatttttcttatttttacagCCAGACTCT CCCACTCGTCTAAAATCTTGAGTATGGATTGATAATCggttatttttttt catcaatgGCTACCGATTGTGATCAATCTATCATTTTAGAGTCAATCGAT GACTAATTAATCAATCGATCGAGTCTTCCATAAAATCCTGATTATCGATT CATTTTCGATTATTGGAATCAATCAATATTCAATCAATCGATTGGTTATC GATTAGCCGATTAGTCATCGATTGGAAAAAGTTATCAATTGTATTGAGTC GGAGAGTCTGGTTACAGGGACTGCCAGGTTCCAAAAAaagcacccttaag ggcggcataTACCCGTACCCTCAATTtgtctaagtacccccccccccccc ccggtccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGactgtagtgcagtggt agagcatccagccACGGttcacaaggttgtgggttcaacatCCGGGCTAC GGTTCACAAAGTTGTAGATttaacccccagccgggtcataccaaagattc ttaaaatggtacttgatgcctctctgcttgatgctcagcaataagagtag gatcaagggtaagtggagcaatccagggagaaagagtggcgccttcccct acctttgggtagatagctatcgaaagaggagccttcgggtcgcctccgac tgcggttgcagacttacttacttccTAGGTTAAAAGCGTTGCCTAATAAA AGGCTTGTCGGGGACTATCAAAAAGTCCCCACCGGTCATTGAGAGGGCGT GCGTTACCCTTGCTGGCCGGCGGGATTGTTCTGCTGAGGTTCAAAAAATC GACCCTACATGAGAatcgttttttgaaaaaatttggccaaaagttgagaa aaaaagaactcGGGAATTCCAGACTACGGTGTGATGGAAATATGAGAAAA TATTACCGAATGGTAGAATTGGGTCTCCTGCTGTACCACAACCCCTTACG TCAAACGTAACATTAAGGGTCCCTGTTACACGAatattaagagccatttt tttaagagtcttcagggtgtgatacctcatcctcttggattttgatgaaa ttttgaccaaatgatccatcactcaagaaaataagaccctgaaaatttca ccttgatatctcaagtagttttgaagatacagcgtctcaaagataggcta ctaagcgaaaattgaaccctaaaaatcatgaactctggtggggagcagat tttgaaagccaatgaatttttattcaagtacattagaaagctgatttaca gtggatttcaagaaatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNttggcaaaaacgtgaaaactaattttcgtcaaaa acggTTTTTTCAGTCTAAAATCACGATTCTTGAGTATTTTGGGATGAAAA CTTCCAATAAGTTGCTAATTATCATTTCAAAtctattgaaattttttcct cgAGCAATACTGGATTATTCCAACCCTTACAGAGTCAATAAGTATTTGAA ATTCCATTTAACTTGGACTATATGGAAGCAAAATTATTTAACCATATTGA TTATCGAACAAAGAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA TGAACTCATAATACATATCAAGATAAAGTTAACGAATTTTAACAATGAAT ACTAATGAAATAATCTAAAGGAGCTGAGAAGGATTAATATTCCAACAAGA AATATCAGAAAAACCTAACCATTAGTAACCTCTTTGAGCTTCTTTGGACT ATTCCCAGTTTGAAAAGCTTAGAAACATAATAAGTATCAAGAGCTCGATT AATGGTAGAAGTAAGATTTTTCTAGAGTTCAGAAGGATGAAATATTTCCG TTTTTGAAGGGTTACCTTGTTCTAATAATGCAAAGTCTACCAGTCACCCA AGCATATGTAACATTTCGAATTCCAACATTTCtggcatttttcaaaagtt taatgGAATAAATAATCTTTGCACTAAACTACAAATACTTTCGATGAAAA GTTTCTTTGTCATAATTTGAAACAAGTCTGTAAAAAGGAGCACTTTTGAA TGAGATTCAAAGCTCAAATTGAACGTAAAGACGCTTCTGGGTAATTTATT TCGCATTTTTTAACACCAGAACTAGTTAGGAATATATCAATCTTAGAAGG CTCTCTATCACAAGTAACGCTTTATCAAGTGATTATCTAACCTTCTCTTC GAAAGGATTtgatgaaaacattcgaatgtagcAAGTCATTTAGGATGAAT CATTCCAACCGTGACATACatgattttttgtaattttggaatATCTCATT CTAGAGAGCTCAAAATGAATTCATATCTTATCTTACCCTACGGATAAAGC AGGCTACAAAATTTTtaagtccaagtgtcgtgattaactttagactgtcc aatatttcttgtccagaagatttaaaCATCATTGTTTGCAGTATCTCATA AAATGTCACCCTAGTAATGTTGCTTAGTTATTTAAGAATCAACAAGTAAG TATGGGTAGGGGGTAAAAGTCGGcatcttcagatcttcttcgcctggtgt tttttctgttccatataatgatagaagacatcaaaaaaatatttttttaa attttatgcatttttgacgaattccagtccaaaaaactgcccgggggggc ttttttaccaaaaaatcagctcttttgaggtttattcttcatatctcttc caaaacttgctcaaattcaagatgtagtgtttttttatgaaaatttaatc tattgtgatgcattctgcgcaatctttaaggtcagaagtccaaaattggc cgaacccccctgggggtactgattcgcactacaggcaaaaattggaaaaa atggcattttctggccttttcaggcctgtaaatatgtcaaaactattgca aatcttatttttttcacttgctgtactaattttatgaagaaacagcaaaa taaacatattggattgaaaattgtgcccgttggagccctaaacgagctgt tttaagccgattttgggtagcaaaatgcttcttaaggccaattttgcaag ttcataaactttaaactaattgattcacacgtctgaaattttcagagatg gaagtcttgagtaaagtctttaagctaaatgaatttcaagattttcactt ttttcaaaaaatcataatggcgtcttcaaaaatcgctttttagcaaaaaa aaatcagatttatcaaaatatagcattttttaaggcaagcttaacagcaa actgagtttaaatgctgattgaaattttttttgcagtgatagtactctgg agatactccagggaaatcaaaatcatttgggtctgggatttgtctatgtc ccccattatggaaataaaatccctgtaaagagccatttttcaggcaaaaa ttcaaatttggactgaaaaattttttaaaatgacaatagacatgggcccg aattttcttgcagtgatagtattctggaaatactccaggaaaatcaaagt catctgggcttgggatttgggtatatccaccatNgctaaaaagtgatttt tgaagacgccattatgattttttgaaaaaagtgaaaatcttgaaattcat tttgattaaagactttactgaagacttccatctctgaaaatttcagacgt gtgaatcaattattttaaagtttatgaacttgtaaaattggccttaaaaa gcattttactACAGAAATCGGCTTAAAACAGCTTgtttagggctccaacg ggcacaattttcaatccaatatgattattttgttgtttcgtcataaaatt tagtacagcaagtgaaaaaagtaagatttgcaatagttttgacatattta caggcctgaaaaggccagaaaatgccattttttccaatttttgcctgtag tgcgaatcagtacccccaggggggttcggccaattttggacttctgacct taaaaattgcgcagaatgcatcacaataggttaaattttcataaaaaaac ataacatcttgaatttgagcaagttttggaagagatatgaagaataaacc tcaaaaaagctgattttttggtaaaaaagcccccctgggcagttttttgg gctggaattcNGGActggaaaatcttaaaaatggcattagacatgaacct aaaatctttttgcagtgatagtcttctggaaatactccaggaaaatcaaa attgttttccCTGTAGTATTTCCaaaagactatcactgcaaaaagatttt aggttcatgtctattgccatattAGAGCAGTTGTTAAGTCAAAATGGGAT TTTggcttgaaatgttgcaatttagccagttttagcacagttttcaattc cataatggcagatatacccaaatcttaaactgaaatgattttgattttga attccCGGAGTATTTCTAGAAGAccatcactgcaaaaagattttagctta ggatcatgtctattgccatttttaagattggcaagatttaagatttttgt tcgaaatattgcattttagcaagaatttcaattccaaaatggtggatata tccaaatcccaagcccagatgactttgattttcctgcagtatttccagaa tactatcactgcaagaaaattcgggcccatgtctattgtcattttagaga ttttNtacatcttgaatttgagcaagttttggaagagaCATGAAGCATAA Acctcaaaaaagctgattttttggtaaaaaaactgcccgggggcagtttt ttgggctggaattcgtcaaatatgcataaaatttaaaaaaaattttttta aatgtcttctatcattatatgggacagaaaaaacaccaggcgaagaagat ctgaagataccccccaaaaaagttactCTACCCCCTACCCCTAAGTAAGG CTGTTAGTGTACACAAATATAgagatattggacagtctaaagttaatcac gatacttggacttagaaattttgcggtaaagcgcaaattattgtcaaagt aggatttctgaatgagtctaaaaagtttttgaataggaattaagtactgt tgaacccatttagttgaagtaacctgcttatatttaggaataatattcac caaactgAAAGGCtgaggcttttcctgaaaatataggccctggaatggta ggaaaggccagatgtcagtctcatttttttacatattctatctgtactta aaaataaagaaacagtcataaaatgtcatctgttaatggaaatgacctga atttttttacagttgttcccttaatgccaatgattacttggctagagaag atcaaccaatattttgacaaaaatttacctttagagcccttaagtgggcc tgatttagcattttaggagggaaaaaacaacgaagttaaNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTCATCCCAAAATACTCAAGAATCGTGATTTTAGACT GAAAAAAccgtttttgacgaaaattagttttcacgtttttgccaaaagtg taaaaaacactgacatatctttaagagacttcaaacccccactgagattt tttgaggttataaactagacctactaaggaagcattactgaaagtttaaa aaaaatttgtagggggttcaaaaagatacgccatcttgaattttgctcca gatctgccaaaatagcaattgtttcggccatttttgacggttacgcaaaa atagaaatcctgaaaatgttatttttgtggccaaaacccaccagtaaacc actccaggtcaaaagtttactTCNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNcctgaaaatgttatttttgtggccaaaacccaccagtaaa ccactccaggtcaaaagtttgcttcaaaaaagtctccaagtaccatcagc agacagctaaaagtgcttctaAACCCAGATTAAACAAAGTTTGAGGCCCT CTACAGGAGATGCtaaagattttcggggaaaattttggagactcaatttg attttttttgattccctacaaaaagttcttgaaatccaatgtaaatctgc tccccaccagagttcatgatttttaggggtcaattttcgcttagtagcct atctttgtgacgctgtatcttcaaaactacttgagatatcaaggtgaaat tttcagggtcttattttcttgtgtgatggatcatttggtcaaaatttcat caaaatcTAAGAGGGTGAGGTATCAgactttctttattctgaagattttt aaaaaaaattggtttttaatTACCAGCACAGGGCTCAATTTTGAGCTTAA ACTTCATTGTGCTCATTATTATCTTTGTGGACGAAATCACATCCATGCGG TGAAAGCATTGCTTGGCTTCCGAGCTATGTGACTAACTAGTTCAACTGGA CGTGTCTTGTACTATTTTTTATTTGCACACATTCACATTGACTTTCTATT TAGAATTGGTTATCGAGAAGAAATTAAAGTTCTTCGTTATGTCTGTTGCT TTCAACGGATCTGATGGTCATAAACTTCCAAGTTTAAATGATTTATATGA AGATAGCGTGATAAGAAAAGAGGATCCGTGCAATTTATTGGATAAAAAAG CCCGCTATCCTTGTGAGCCCACCCCGCTCCGTGTAAGCGCTTGCTTAATG AGATCAATGACAAAACAAAACGATACACCTCCCCCAAAGTCATACAGGAC CCTTTCAAGTCGTCGACGAAACACGCAGCGACGCAATAACACCAGTGTCG TTGTTACAGGGCGCCATTCGAAGGAAAATTCAACCACTTCAGTTAAAGCA CCGGGTAAAGTTGAACCACATGTTTTAAAACAGGACCATTCGCAAATTCT tgatgaaataaataaactctTTCAAAATAATTCAGCTCAAAAGAACGTCA GCGTTTTGAAACAGTTGTTATTACGTAGCGCTTCTGAGCAACAGACGACT GCTTATAATCAGGCGAATCAAAAGAGACTGCCAAGCGTgattaaagaaga aaataagaatgTTGGAATAGGTAATGACGAGGTTAAGAAAACTGAAAGTT TACNCGCCAAGCGTgattaaagaagaaaataagaatgTTGGAATAGGTAA TGACGAGGTTAAGAAAACTGAAAGTTTACGAGAAACAGTATGGAAGAACT CTAAAGATCAAGAAAGTGACGAGTTGATAGAAACAGAGGAAGAATCGGTT GAAATGAAAGTCGTTAGCGAGGAAGAGGTCAAAAATCAAATCGAAacacc tgaaaatgaaaatcaagatgAATTATCAGAGGAAAATTCCCGAATGCaag attgaaaaaatttctgtcAGCATAAAACTTATTGTTTTCATGTGCTTTAT TATCGTACTTTGTTGATTTGAACCCTTGGTCTTCCTTttatacattaaag gaagaaattttggcggatggccaaaaaagttttttcagaaggaatttaat ttggcggacgaaggacatttttgtccaaaaatcgccattaaaaaaggaaa aatctgttttaaagcctgaaatagcacacatttgggggaataaatagagc aacttaaatttggcg

Coding sequence (CDS) from alignment at scaffold_220:51590..60704+

>TCONS_00052792 ID=TCONS_00052792|Name=TCONS_00052792|organism=Clytia hemisphaerica|type=CDS|length=2475bp|location=Sequence derived from alignment at scaffold_220:51590..60704+ (Clytia hemisphaerica)
ATGATGAATAAATCATTTGATCGTAAACGCGCAAGAAAAACAAAGCAAGA
ATTGGTTATCGAGAAGAAATTAAAGTTCTTCGTTATGTCTGTTGCTTTCA
ACGGATCTGATGGTCATAAACTTCCAAGTTTAAATGATTTATATGAAGAT
AGCGTGATAAGAAAAGAGGATCCGTGCAATTTATTGGATAAAAAAGCCCG
CTATCCTTGTGAGCCCACCCCGCTCCGTGTAAGCGCTTGCTTAATGAGAT
CAATGACAAAACAAAACGATACACCTCCCCCAAAGTCATACAGGACCCTT
TCAAGTCGTCGACGAAACACGCAGCGACGCAATAACACCAGTGTCGTTGT
TACAGGGCGCCATTCGAAGGAAAATTCAACCACTTCAGTTAAAGCACCGG
GTAAAGTTGAACCACATGTTTTAAAACAGGACCATTCGCAAATTCTtgat
gaaataaataaactctTTCAAAATAATTCAGCTCAAAAGAACGTCAGCGT
TTTGAAACAGTTGTTATTACGTAGCGCTTCTGAGCAACAGACGACTGCTT
ATAATCAGGCGAATCAAAAGAGACTGCCAAGCGTgattaaagaagaaaat
aagaatgTTGGAATAGGTAATGACGAGGTTAAGAAAACTGAAAGTTTACG
AGAAACAGTATGGAAGAACTCTAAAGATCAAGAAAGTGACGAGTTGATAG
AAACAGAGGAAGAATCGGTTGAAATGAAAGTCGTTAGCGAGGAAGAGGTC
AAAAATCAAATCGAAacacctgaaaatgaaaatcaagatgAATTATCAGA
GGAAAATTCCCGAATGCaagattgaATGATGAATAAATCATTTGATCGTA
AACGCGCAAGAAAAACAAAGCAAGAATTGGTTATCGAGAAGAAATTAAAG
TTCTTCGTTATGTCTGTTGCTTTCAACGGATCTGATGGTCATAAACTTCC
AAGTTTAAATGATTTATATGAAGATAGCGTGATAAGAAAAGAGGATCCGT
GCAATTTATTGGATAAAAAAGCCCGCTATCCTTGTGAGCCCACCCCGCTC
CGTGTAAGCGCTTGCTTAATGAGATCAATGACAAAACAAAACGATACACC
TCCCCCAAAGTCATACAGGACCCTTTCAAGTCGTCGACGAAACACGCAGC
GACGCAATAACACCAGTGTCGTTGTTACAGGGCGCCATTCGAAGGAAAAT
TCAACCACTTCAGTTAAAGCACCGGGTAAAGTTGAACCACATGTTTTAAA
ACAGGACCATTCGCAAATTCTtgatgaaataaataaactctTTCAAAATA
ATTCAGCTCAAAAGAACGTCAGCGTTTTGAAACAGTTGTTATTACGTAGC
GCTTCTGAGCAACAGACGACTGCTTATAATCAGGCGAATCAAAAGAGACT
GCCAAGCGTgattaaagaagaaaataagaatgTTGGAATAGGTAATGACG
AGGTTAAGAAAACTGAAAGTTTACGAGAAACAGTATGGAAGAACTCTAAA
GATCAAGAAAGTGACGAGTTGATAGAAACAGAGGAAGAATCGGTTGAAAT
GAAAGTCGTTAGCGAGGAAGAGGTCAAAAATCAAATCGAAacacctgaaa
atgaaaatcaagatgAATTATCAGAGGAAAATTCCCGAATGCaagattga
ATGATGAATAAATCATTTGATCGTAAACGCGCAAGAAAAACAAAGCAAGA
ATTGGTTATCGAGAAGAAATTAAAGTTCTTCGTTATGTCTGTTGCTTTCA
ACGGATCTGATGGTCATAAACTTCCAAGTTTAAATGATTTATATGAAGAT
AGCGTGATAAGAAAAGAGGATCCGTGCAATTTATTGGATAAAAAAGCCCG
CTATCCTTGTGAGCCCACCCCGCTCCGTGTAAGCGCTTGCTTAATGAGAT
CAATGACAAAACAAAACGATACACCTCCCCCAAAGTCATACAGGACCCTT
TCAAGTCGTCGACGAAACACGCAGCGACGCAATAACACCAGTGTCGTTGT
TACAGGGCGCCATTCGAAGGAAAATTCAACCACTTCAGTTAAAGCACCGG
GTAAAGTTGAACCACATGTTTTAAAACAGGACCATTCGCAAATTCTtgat
gaaataaataaactctTTCAAAATAATTCAGCTCAAAAGAACGTCAGCGT
TTTGAAACAGTTGTTATTACGTAGCGCTTCTGAGCAACAGACGACTGCTT
ATAATCAGGCGAATCAAAAGAGACTGCCAAGCGTgattaaagaagaaaat
aagaatgTTGGAATAGGTAATGACGAGGTTAAGAAAACTGAAAGTTTACG
AGAAACAGTATGGAAGAACTCTAAAGATCAAGAAAGTGACGAGTTGATAG
AAACAGAGGAAGAATCGGTTGAAATGAAAGTCGTTAGCGAGGAAGAGGTC
AAAAATCAAATCGAAacacctgaaaatgaaaatcaagatgAATTATCAGA
GGAAAATTCCCGAATGCaagattga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033369XLOC_033369Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052792-proteinTCONS_00052792-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052792-exon-scaffold_220-1491911889:51590..51749TCONS_00052792-exon-scaffold_220-1491911889:51590..51749Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1510915933:51590..51749TCONS_00052792-exon-scaffold_220-1510915933:51590..51749Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1575043694:51590..51749TCONS_00052792-exon-scaffold_220-1575043694:51590..51749Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1491911889:59593..60159TCONS_00052792-exon-scaffold_220-1491911889:59593..60159Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1510915933:59593..60159TCONS_00052792-exon-scaffold_220-1510915933:59593..60159Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1575043694:59593..60159TCONS_00052792-exon-scaffold_220-1575043694:59593..60159Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1491911889:60236..60704TCONS_00052792-exon-scaffold_220-1491911889:60236..60704Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1510915933:60236..60704TCONS_00052792-exon-scaffold_220-1510915933:60236..60704Clytia hemisphaericaexon
TCONS_00052792-exon-scaffold_220-1575043694:60236..60704TCONS_00052792-exon-scaffold_220-1575043694:60236..60704Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:51590..60704 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0385652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77.8631 49.6187 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052792 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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