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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052827 ID=TCONS_00052827|Name=TCONS_00052827|organism=Clytia hemisphaerica|type=transcript|length=1122bp
ACTtgctcctttttcttttttcagagatTGTTTGTTgaaacacatttttt
tcttcaaatcaacGGAATACTCAAGCATTGACCCATCTCAGTTCATGCAG
TGTTTGAAGTATTGAAGTTTACAGAAACTGTTTACAAGTCACTATTTTCC
GTTTTCCTTGCATTTCTATCAAGTCTTTTACTCACTTAAGCGGTATCTTA
ATTTCCATTCCCAATATTTTCTTAATTTAAGACTTATAGATCGATCAAAG
ATGACTGACCAGAGCAAAGAGGGAGCTGAAAACTACAGATTGACAAGTTC
TAAAATACAACAACACTATTTTGACATGCTTATCAATACTATTGATATCC
AGCCTGGATGGAAAGTTTTAGATCTAGGTTGTGGAACTGGCAATGGAACA
AAGAAGCTATGTGAACGAGTTGGTGCTTCTGGACATGTCATTGGCATAGA
TCCTATTGCAGAGAGAATCGTTCAGGCGAAAGAGTACTATGCAGCAGGTA
ATATTAAATATCACACAGCATACGGTCGAGATGCGTGCACTTTCGGTGAA
GGCATTTTCGATCTTGTAGTCGCAGGTACAGTCATGCATTGGCTGTCCCC
TGAAGAGAAACAAAAAACATTGGAAAGTGTgtacaaagccttaaaacctG
GTGGAATCTTTCTCTTCAATAACATGTTGAAATATGACAGTGCAAACACC
TTGAAATTTCTCGATTTCTTTAAAGATCAAAGCGTCAAAGAAAAGCTCTT
CGCTGCTGTTTTCTGCCCAGATAAAAGAACTTTTTATGATCTGGCACAGA
AAACAGGATTCAGCAGAACGACAATTGATGAAGTTTCAGTCCAAGTTCCA
TTTGATTCACTTGAACATGCAATTCATTGGTTTTCAGCTTCTCTACATGC
TATTGGATTTCATACAGCTCTGGACGAATTACGTCAAGTTACCAGCGacg
aaaataataatttggattttcttttcaatgaaaaaggaGAACCTTATTTT
GATAATAAATATCATTTTGTAACTAGTCACAAGTAATTTTTCGGCGATAA
ATAGTGAATCTATTATATGATTGATTTTAAATCATTTTCGTAATAGCAGA
AAAGATATCTTTCAAATAATTA Run BLAST on NCBI transcript from alignment at scaffold_220:36273..37394- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052827 ID=TCONS_00052827|Name=TCONS_00052827|organism=Clytia hemisphaerica|type=transcript|length=1122bp|location=Sequence derived from alignment at scaffold_220:36273..37394- (Clytia hemisphaerica)
ACTTGCTCCTTTTTCTTTTTTCAGAGATTGTTTGTTGAAACACATTTTTT
TCTTCAAATCAACGGAATACTCAAGCATTGACCCATCTCAGTTCATGCAG
TGTTTGAAGTATTGAAGTTTACAGAAACTGTTTACAAGTCACTATTTTCC
GTTTTCCTTGCATTTCTATCAAGTCTTTTACTCACTTAAGCGGTATCTTA
ATTTCCATTCCCAATATTTTCTTAATTTAAGACTTATAGATCGATCAAAG
ATGACTGACCAGAGCAAAGAGGGAGCTGAAAACTACAGATTGACAAGTTC
TAAAATACAACAACACTATTTTGACATGCTTATCAATACTATTGATATCC
AGCCTGGATGGAAAGTTTTAGATCTAGGTTGTGGAACTGGCAATGGAACA
AAGAAGCTATGTGAACGAGTTGGTGCTTCTGGACATGTCATTGGCATAGA
TCCTATTGCAGAGAGAATCGTTCAGGCGAAAGAGTACTATGCAGCAGGTA
ATATTAAATATCACACAGCATACGGTCGAGATGCGTGCACTTTCGGTGAA
GGCATTTTCGATCTTGTAGTCGCAGGTACAGTCATGCATTGGCTGTCCCC
TGAAGAGAAACAAAAAACATTGGAAAGTGTGTACAAAGCCTTAAAACCTG
GTGGAATCTTTCTCTTCAATAACATGTTGAAATATGACAGTGCAAACACC
TTGAAATTTCTCGATTTCTTTAAAGATCAAAGCGTCAAAGAAAAGCTCTT
CGCTGCTGTTTTCTGCCCAGATAAAAGAACTTTTTATGATCTGGCACAGA
AAACAGGATTCAGCAGAACGACAATTGATGAAGTTTCAGTCCAAGTTCCA
TTTGATTCACTTGAACATGCAATTCATTGGTTTTCAGCTTCTCTACATGC
TATTGGATTTCATACAGCTCTGGACGAATTACGTCAAGTTACCAGCGACG
AAAATAATAATTTGGATTTTCTTTTCAATGAAAAAGGAGAACCTTATTTT
GATAATAAATATCATTTTGTAACTAGTCACAAGTAATTTTTCGGCGATAA
ATAGTGAATCTATTATATGATTGATTTTAAATCATTTTCGTAATAGCAGA
AAAGATATCTTTCAAATAATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052827-exon-scaffold_220-1575043694:36273..37394 | TCONS_00052827-exon-scaffold_220-1575043694:36273..37394 | Clytia hemisphaerica | exon |
| TCONS_00052827-exon-scaffold_220-1510915933:36273..37394 | TCONS_00052827-exon-scaffold_220-1510915933:36273..37394 | Clytia hemisphaerica | exon |
| TCONS_00052827-exon-scaffold_220-1491911889:36273..37394 | TCONS_00052827-exon-scaffold_220-1491911889:36273..37394 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_220 | supercontig | scaffold_220:36273..37394 - |
Blast
The following BLAST results are available for this feature:
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