TCONS_00052839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052839
Unique NameTCONS_00052839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1956

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052839 ID=TCONS_00052839|Name=TCONS_00052839|organism=Clytia hemisphaerica|type=transcript|length=1956bp
TTTGCACCGACAATCACGTCCTTTCATCGTAACGCAGCAGTTGTAGACGA
AAAACCCTCGTGGCCACAGCGAAGTATCTCAATGTAAATTTTAANGGAGC
TAAACTTATCTCCTTTACTTTTTGCACCGACAATCACGTCCTTTCATCGT
AACGCAGCAGTTGTAGACGAAAAACCCtcattttctaaaataattttact
ttcaaCTATGGCTGATGGAAACCAAGGTGACCAACAATGCTCTTTTGGTA
TCAAGAAAATAGTTGATTGTAAGATTGATCAGaCTGGTAAACAACTGTAC
AAGGTGAAATGGGAGGCTACGTGGGAACCCGCAGACAGTCTCTCAAGTTG
TCAGCATTTAATCGATGAATTCTGGGGTTTTGTCAACAAAGCAAAAACAA
ATGAAGATATAGCACAGCAACACAGAAAACGGATGAGGCTAGACCCATCT
GCAGGACAAAATGGCACAGTTGGATTAGGACCTCATCACATGTTAAGTGA
AGATAGTAAAGATGAAGTACAAAGGCTAATTGCAAGGACAAATGCTACTC
AACCAGGAAGTCTAATGACTCCTAGTGACTTATTGAACACACAACAGAAT
CAAATGGGTGTGCCCAGGACTCCAACTAGAGCACCTCAATCTCCATTCGC
TCAAAATACACGAATGCCTTTCTCACAAAGTCCTGGTCAGTTtaaccaac
aacaacaacagtttGGATCGCCACAAACTGGCTTTCCAAATCAATCTCCC
ATGAGTTCCCCAAGCACACGTGGAAAAGCACCTGGGTTTGGAAAACCTGC
GTCCAATATCAAAAGTGAACAAGATGAATCTAGTAACTCAAAGAAAAGTA
GTGGTCTGAGTGACTTGAAATTCCTCGAAAGTTTTGATAACCCTTACGTC
AAAGTCTCAGTATTCTGCAAAGTGTGCAACAAAGAGCAAAGCTTGAAATA
CCAACACACTTGGAAACGACATTTCCTTACTCACTCAAACCGTGAGGATT
TACCGAATAAATGTCCTACGTGTGGAAAGGGCTTTATCACAGCACACGAC
ATGAAGAAACACATTGAAAACAGACACAAACCTAAGAATGATCTGATGAA
GATTGAACAAAAGTTCATTCCAGATTTTCACCAGACTAACTTTCCACCAA
TGTGagacggtatgacggtattcaAAGTAAGCTTTTGACACCCAGCTTGT
GTTCCTTATACATTCGACTCTCCAAAAAGACGTTCattttgtttctattt
ttttcaatctttctgGCCTACATCTTATGtcatagattttatttttgttt
acgtatagcgaaattatttttttgaattagtGACTCAGTTATCAGGCTAT
CTTTTCATAGGGTTATACATGCGTTTGTTTTCCCGACCCTTGCCTACTCC
CAACTGTACCCTGTCCGATTTTGCAATATTGTGACACGAAAACTATGAAA
TTCCAAAGGCTTGGACATTTTGAATTCTGTAAGCGTTAGCTCTAAACCTT
GTGTCGttgacaaagtttttttttcctttttgacgATTCAGACTTTTGAG
AAAATTAATCATGAGACTTCGAGCTTCTCGCTGTGTTCACGGCTTCATag
atcatgtttttattttattttagcaTTTAACCCTCATTTAGTGTGTAGTT
TTAACCCTCAGAAAACTATGTACATaaaactgaaatatttatagactttt
attttactttatctTCCGCATATTATGGGttgtaaatattatttttagaG
TAGAAGGAACATTCTATACAAAATGTTTTGGTTGGTCTCTTCTTCAGCTA
TCAGAAGCAAATTTGTGGAATGAGTAAGTCCTGAAACTAAAATTAGCTTG
ATATCTATTTTTGACAAAAGCAAGTGCTTGGACTTGTGTTGAGGCCGAAC
GGAACATAGAagtagttttttgtttttaatagcCACTGTTAAAAAGCTTA
CCTATG
Run BLAST on NCBI

transcript from alignment at scaffold_220:150023..170720-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052839 ID=TCONS_00052839|Name=TCONS_00052839|organism=Clytia hemisphaerica|type=transcript|length=20698bp|location=Sequence derived from alignment at scaffold_220:150023..170720- (Clytia hemisphaerica)
TTTGCACCGACAATCACGTCCTTTCATCGTAACGCAGCAGTTGTAGACGA AAAACCCTCGTGGCCACAGCGAAGTATCTCAATGTAAATTTTAANGGAGC TAAACTTATCTCCTTTACTTTTTGCACCGACAATCACGTCCTTTCATCGT AACGCAGCAGTTGTAGACGAAAAACCCTCATTTTCTAAAATAATTTTACT TTCAACTATGGCTGATGGAAACCAAGGTGACCAACAATGCTCTTTTGGTA TCAAGAAAATAGTTGATTGTAAGATTGATCAGGTAATGCCCGAAATTTCT ATTCAAGTTCTTTGGGGAATAAGTTTGCAGATTCGTGTGTTTACATTCTT TTATGATTCCTCCCATCGGTGTCATGGCACTAAAAAACCCATTGTATTTG CAAATGAATATGATATGAAATACTTTTCTTCTGTCCATTCCATACAGACT TTATTTCCAACTGTTCAAAAAGCTCTAAAATAGCATCTAATAGCATTACA GTAGAATATGATCCTTCAATGCAATGGCCACAAAACTATAAAGTGCATTT TGTTTTGCGTGAGGTCTATTTCTATTATTTCTATTTCTATTTGATTGAGT TGCAGGAGGCTTTGAGGCCTTTTTTCGCAACTATAAGACGCTTTCAATGA GCGCCCCGTCAGCACCTTGGACTGACTACCCAATTCCCCTCACATGGCAT GGGTTGACCCGGGCGAAGGTTCATTCACTTGCCAAGTGAACCGCTGCGAG TGGGAATCGAACCTCAGTCGCCTGTGCAGTAACCAAGGCCAGACGGTGTC AATCGAACGAATCGAACGCCGAATCAATCGAACGCAATCGAATATTACCC AGGATTTTCTGTTCGATTGCTTCGATTACGTTCGATTGCTTTGATAACGT TTGATTGCATTCGATGCGTTCGATTGATTCAATGGTATTAGATTTTATTC GCTTTGGTATGGTAATTAAGCGCTCGGCCGCCCACGCTAAAAAGCTCAGA GTGATCCAATTTAATCTAATCGCAATCAAACTCATCGAACATAATCGTAA TCGAACGAAATCAAAGATTAATCCAATGTCAATTATCAATCAAACCAATC GAACATAGTCAACTATCAATCGAACCAATCTAACCTTACTCGAACTCAAT CGAACACAATCGAATATTACCCAGGAATCGGCCTTTCGATTGAGATTCGA TTACGTTTGACAATCGAATCGCAATTATTCGATCGTGTTCGATTACGTTT GATTGGTTCGATTGCAATTTTTGTTCGAAGTTGTTCGATTGACACCGTCT GGCCAAGGTCAATGATCACTATACCACAACGCAACGCAACGCAACGCAAG GTCATGATAGGGACTTTTTCTAGCGTGATCACATGATTTGGAAATTTATA TATATATCTGTGATTGGTTTTCCAAAGTCAAAACGTGATTGTGATTTGTA GAATGGGCTATTCAAAAAAAAAAATGTATAGGGGTATTGAGGAACTTCAC TAACCCCTCTGGAAATTTTGGATAACAAACTATCCCCTGGAAATTAGGAG TCGACGCCCCTGGAAAGTGAAATTTTGTGAAAAAGGGCCTGGAAAGTGAC TATTGATGCCAGTTTAGGAGGAGAGAACCCCCTGGAAACCTTTAATAACC CCCTTGGAAAATCTGAAAATGACCAAAAGCCCCTTGGAAAATCAAGGCTC AGTCTCCCCTGGAAAAGTTCGTCAATACCCCTACTATGGTTTAAAAATGG AATAGTCCAATTTTTGAGGCGCAATGATGCGTGATTCATGGACTTTTTGA AAAGGGATGCGTGATTGTCAAATTTATTTTGTTTATTAGCTAGGGGTCAC TCGCATATTGATGCAACCTTTGGACCAAAATCGGCATCAAAGGGCCTGGA CCGGGGTCCCAAAATAATGTGCATTTTGAAGAACAACCCAAAAGGAAACC TTTCATCCTCCTAGCATTTTAATTTCCTACCTAGTGATTATTCTCAATCA TCTTGGAAGAAATGCTACTTTGTTCAAGAAAGCAAGTTTTTGCCTGATTT TGCATGTGTTTAGAAAAAAATTGGTAGGCTCATATTTTTTAAATCACAAG CTTCAATTGGAAGCGTTGCGTAAAATAACAGCGCAACCCTGGGGAAACGC TGCGAAAAACCGCAACGTTGCGGATCTATGCAATTTGCCGAACTGAAAAG GAGCACGAGACAAACATCGGGCTGTTTGTTTTGGTTAAGATTGTTCAATA AAAAAGCGAAGCAAACAAATATTTAGTTACATAAAAGGCAGTTAGGGAAA CCATCCAGGATGCTGCCATTCTATAAGCCAGCAAAAACTAAATGACACTT GTAAACTTAACTTAACTTAACTACTTCCCAAAGCTGGAGACCAAAACAAA TTATCTTATGATTATGGTGGCTTTTTGGATCTATTGTTAAGGCCATCTAA AATGGTGGAAAGAGTTGAGTGGGTGGTAACGTCAAAACGCCCAATAAGAT CTTCCAACAGAAGGAGAGTTTAGTTACCGCGTGAGTTACGTCATGCACTC CAACGCAGTGCACAACGAATGGTGTTTCAGTGAATATTAATAATTATAAG AATATCTTATGTGCTTAACTTCAGTAAACCTCGAGTGCTTCAATAAAGAT GAAGAAGGTAAGAAGATAAAAAATGCGCTGGATAATTTTCATTGTAAAAG TTTGGTCAATCATTGCTGAAAGCTTGAAAAAGTTTTTCCAATACAAAAAA AATTTCAGCCCATTAAAAGCAGTGTACTTATACTTACTTTGTTTGCTACA TTGTCTAGACTAAAAAAAGTGAGAAAAGACACAAACATACAGGGTTCGAA TTATAAATTTTATGACTTATGAGCTTCGCTATTTTTCCAGTGTTTGCAAA GCATTTTGAGTATTTTGCGATGTAGATTGGAAGAAAATGCGAAAGTATCT TCAATTCATTTCTCTAGAAAAGCGAAGTTAGACTTAAAGTAAGAGATTAT AGACAAAGCAAAGTGCAGTTTTGAAGTAACGAGTAGATAAAGTAGATAAA GCAATAGATAAACAAGTGAATAAAGTTGTTAGTTTATAAAGCGATAGATA AAGGAATGAATAAAGTAGCAAAGTGGCAAGTAGATAAAGCAATGAATAAA CGAGTGAAAAAGTAGTAGATTTGATAAAAACAATAGATACGAGTGAATAA AGTAGCAAAGTAGCAAGTTGATAAAGCAATAGATAAACAAGTGAATAAAG TAGCGAAGTGGCAAGTAGCTAAAGCAATAGATAAACGAGTGAATAAATTA GCAAAGTAGTGAGTTGATAAAGCAATAGATAAACGAATGAATTTTCAAAT GTGTTTATTAGATTTATGCTCAAAGTCACGCAAAAATGACAAAATACAAC CAATAACATAAGGAAGATGATGGATTAATGATAAAAAAGTAAAATATTCT GAAATATTATATATATTTTTTTGTTTTATTATTTTCCAATCAAATAAATG TTGAAAATTTCTCTTAGAGAGATAACCCCAGAGAAATAACTGACCCTGAT TGAGTGAACCCCTAATTAGAAATTCTCAACCCAATTTACTACTACGCTTA CTGTGCTTGTATCTTGTCCCATACAGTATTCAGCAATTTTGAAACTTGGC AACTATGTTCTCCCGCTTAAAAAAATGTCCTCGAAATTCTTTCTCCCGTA TTTTCTATAATACACCTTTCCCATAATTTTAACTTTGGCTAGACTCTATC ACTGGATACAATCACTAACTTTCTAATCAATGACCGATCTCTCAATAATC AAGGTGATAATAGAGCCTACTGTAAAATCCTGAGTGTTGATAATTGATCA TTGATTGGTTTTTTCATCAATCTCAGAGCCAATTGATGAAAATCAAAAAA AAAGATTACGTTTTTTTTTTTTAAGCATTGCACTTGTAAGCATATCTAGG CTCAGATATGAGGAAAAATTAAGCATACGGAAGCATTACTTGAGCCTACG AAAAGTGTTTTTTTCCTGATTTTGTTTGTTTCTGTTGTTCTGTATTTATC ATAATACTCCCCCCACTAGGTAGAGGACTGAATATACCCCCTATTCGCCT TTCTCTCCCCCCCCCATCTTCCTGGGGGGGGGTGATCCCATGGAAAGCTA GAACAATTTCAATCTAAATTGATTTACAATTAAATAGAGGTTTTTGGGAA ATAGTTCTCTGGTGTTTGGTATTGAAAATCAAGGCTAAAAATCAGATCAT ATTTCTAAAATCTACAAATTAAATTTTTTTGGAAAAAAAGCTTCTAATTT TTTGGGTAGCAGCTGTAAATGATAGAACTTTATTTGGCTTGCAGCTGAAA CAACTAAATAATCACATTAAATAATTCAATCAAATTGTAAGTCCACGATA ATTTAGTTAAAACGTTTTAATTAATACACCATTACTTATTACTGCTTATT ATATTCTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGT CCGTCCGTCCGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTT TTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AAATGCATAATCCAGGTAGGTCCATCAAAGTATCACTTGTTATTTTTTAT TTTACTAGACTGGTAAACAACTGTACAAGGTGAAATGGGAGGCTACGTGG GAACCCGCAGACAGTCTCTCAAGTTGTCAGCATTTAATCGATGAATTCTG GGGTTTTGTCAACAAAGCAAAAACAAATGAAGATATAGCACAGCAACACA GAAAACGGGTATGTTTTAGTTCTCTAGTTTTTCCAACACCTTTCCTCCTA CCAGTTTATTCCATTTTAGTGTCTTGTCATTGAACTTATGGTCCTCTTGA ATCAAATGAAATAATTGTACAACAGTTTTTTTCATGAAGAAACAATATAA AATTTTCCTGAAGTTTGTTTTGTAACATTACCATTAAAAATTACAAACTA TATTTTTGTTTAAAGATGAGGCTAGACCCATCTGCAGGACAAAATGGCAC AGTTGGATTAGGACCTCATCACATGTTAAGTGAAGATAGTAAAGATGAAG TACAAAGGCTAATTGCAAGGACAAATGCTACTCAACCAGGAAGTCTAATG ACTCCTAGTGACTTATTGAACACACAACAGGTAAGAATAAAAATATCTCC TTTTTATACAGAAGCTATCTTGAGTTAACTTTCTTAGAGGCATATGTTGA TAGTGAAGGTAAAGGATACTTCAACAAAATAATTTTAGAAAATTAGCAAA AAAACTTTTTGTGAGTATATGAAAAAATACTGATTTAATAGCATCAATAT TTCTGTTACAGAATCAAATGGGTGTGCCCAGGACTCCAACTAGAGCACCT CAATCTCCATTCGCTCAAAATACACGAATGCCTTTCTCACAAAGTCCTGG TCAGTTTAACCAACAACAACAACAGTTTGGATCGCCACAAACTGGCTTTC CAAATCAATCTCCCATGAGTTCCCCAAGCACACGTGGAAAAGCACCTGGG TTTGGAAAACCTGCGTCCAATATCAAAAGTGAACAAGATGAATCTGTAAG TCCCCATTTTATTCACTTTCGCATGGATTTTTTAGAGCATACAAGTAGTC TTTTGGCTTCTGATTATAATAGCTGTTAAATGGTATGACCGTTATAGTCA GAACTTTCAGTGGAGTTTTAACAATAACAAAGAATCTTACCTTGCTAATT TTTGTATCTCCTAATAATAACTCTATTTTAATGCATTAACCTAAAAGCTT TTGAACTTTTACCCCTATTAATTTTAGTCTAATTTCGAACCCTAAGTTAG TTTTACTTGTGAATTGTTAGTATAAAAAGTACCTTGCAGTCAACTCTCTC ATAAGAGGTAAAGCTAGATCAGCAAAGTTTCAAAACAACCTCCCTTTCGT TAGATTTTGAGCTTTTTACAAAGCTGCTTAAAAATGATTTTGAATTCAAA ACATTTTAGAAAATGCGCGAAAAAAATGCGTTTCAAAACCTCAGTTGATT TTTTGCATGCGTCTTGTGCATTTTGTGCCCTCTTGTTGATGTCCAGTTGC AGATTGGTTGCTGGTGGTAGATGATTCGATCTCTTGTGAGAGGGAGGACT GTGGAGGAGGTCTCCTAGCTTGTGAAGTGCACAGTTCGAATCAGCAAGTC GTGGAAAAGGCATGTGAAACAAGAAAAATGTACTCTTTTCTAGAAGACAA CCACAACTACACAAAAAGGAGGAGAATCTAAAATCTTGGAAGCATGGACC AACCCTTACGTAGAGTTGCAATTCCTCTGTCGCATTTGCAAGAAACCCCA GGCATATAAGTATAGGCGTAACTGGAGAAGGCACTATGAAAGCCACTCTG AGGAGAAACAATATGTTTGTGATATTTGTGGTACTGGCTATAAAGCAAAT TATTTACTCAAAAACCACATTGCTAATAAGCATCCAACAAGTGTGAATCC TGCTGATTCAGCAGAACAGGAGTTTAAACCACAGTCTGTTCAGGTCAAGC AAGAACAACAACCTGAATCAGACGAACCCTTTTATTTAAATTTGTAATAT CTCCCTGTCTAACGAAAAAGTTAATATTTTCTATGCGTGTGTTACTATTA AAAGTATAAAGTATTATTCAGATATTTATGTAAATATGTTATGATGAAGT GTATATATTTTAAAACTATTTATTTTTATTTTTGTTATTAAACCTGTAGC TTATATATTATTGAAATATTTTTTTACTCTGAAAGTGGAGGTTGCTTTGT CACTGAAGCTGTCATTTTTTTCTATTTTTTGCTAGAGAAGATATTTTGTT TATTTTTTATGTCCCATAGAAATCCAATGTTAAGAATATTGTGACGCAAA AAGCTGCTGAAGACTTTGAAAATCCGTACGTCCGCATTGCTTATTTGTGT CGAATTTGCAGCAAAGAACAATCTAAGAAGTTCAAATTTGATTGGAAGAG ACATTATCTCACTCATAACACTGAGCCCAAGAGCCATGTTTGCCACCTAT GTGGGAAGGCTTATAATCAGCTTGGGCATTTGAACAAGCACATGAGGCAA AAACATCATCAAGAAAGTCCTGATGTTGTTTTTAAACAAGAAGTTAAGGC CGAATTCCATTCTGAAATTCTTTAAATTACAAATTGCTGTTTTAGCTGGT TTTAGTACTTTTTGTTAACACCTTGCTTTTCATTTTATAGCTTTCCCTTT TCAATAGTTAATTTCATTTAGTTGATGATATATTTTATTATGCTTATTGT TACAAAATATTTTTATGGAAATTTATATTTTTTCCAAAGTAGCCAGTTCT AGCCATCTAGTGGGGAGTTGAGTGGAAGGACTTTTTATACAAAATTAAAC TAGATAGGTATCCCATTGATAGCTACCCATTTTTCAGAAAAATGTAAAGC CATCCGCTGGTAAATCTGAAACCAATCTTCAGACAATGAAAGTCATTGAA AGCTTCGAAAATCCTTTTACCAAGTTGATCATTGTTTGTAAAATATGCAA CAAGGAATCCTCGAAGTTTCAACGCAACTGGAAAAATCATTATCTATCTC ATGTCGGTGATGATGAAAAACCACACAAATGCAAGATCTGTAATCGTGGA TTCATCAAGCCATGTTTTCTCTCTAAACATATGAAAAAAGCCCACAGTGG TGCAATGCCAACCTCCGTCAAACATGAAGAAATGGCTTTGTCAAAATTGG AAAGTTTCACACAATGATAAAGACTTGTCATCTAAAATCTCTAGTATCAA TATTAAGTAGTTTTTGTTAGTCTCTTTGTTGAGAGAGTTGAATGAAGGTG TTTTTATAAACGATTGGATCGATATTTTTTACCATCCAAACCTTACTCCG TTTTAGAAAGTGAGGCAGTCTCCAAGCCAAGGCAAATCAAATGGTCAGAC TAATTCGCATACAATGAAAGTCATTGAAAGTTTCAATAACCCGTATACCA AATTGATCATTGTTTGCAAAGTGTGTGATAAGAAATCATCCAAGTTTCAA CATGATTGGAAAACTCATTATTTGTCTCATGTCAGTGACGACCAAAAACC TCACCAGTGCAAGATTTGTAATCGTGGGTTTATCAAGCCAGGCTTGCTTA CGAAACATATGGAGAAGGTGCATGGTGTGTCAGGATCTAGTGTCAAAAAA GAAGAATTCTCGATACCAAAAGCTGAGTCATTTTCGGGATATGACTTTTA AAGCAATAGATATTTGTTACGCTGTAAAAGTGTTGTATATTTGTAAATTA ATTTGAACTGATGAAAATTTTTTTTGCTTGGGAGAGTTGAGTCAAGCCTT TTTATACTGACACATTGTAATCACACAAGTCATGCTTGCCAAATCTTACT CCGTTTCAGAAAGTGAAGCAGTCTACAAGCCAAGGCAAATCAAATGGCCA GACCAATCTTCATACTATGAAACTTATTGAAAGTTTTGAAAATCCTTATA CAAAATTGATCATTGTCTGTAAAGTATGTAATAAGGAGGCATCGAAATAT CAACGTGATTGGAAAACTCATTATTTGTCTCATGTCAGTGACGACCAAAA ACCACACCAGTGCAAGATCTGTAATCGCGGGTTTATCAAGCCAGGCTTAC TCTCAAAACACATGGAAAAGATGCATGGTGGTGCAGTAGAGTCATTTTCC AAAAAGGAAGAATTTTCAATACCAAAAACTGAGCCATTTCCCAGCCACGA CTTTTAAAGTAGTGTACCATATTTTCACTTTTAAAAGTTTTGAAATAAAG AAAATTGTAATTATTTTGAATTTATCTTTTTGGGAGAGTTGAGTGAAGGC ATTTTATATTACAAGACCATCGTGATCACATTAGTTATGCTAGCCAAACC TTCTTCCATTTTAGAAGAAAGTGAAGCAGTCTCCTAGCCAAGGAAAATCT GATGGCCACAGTACACAAACAATGAAAGTCATTGAAAGCTTTGAAAATCC ATACACCAAGTTGATCATTGTTTGTAAGATTTGTAATAAAGAAGCATCAA AGTTTCAACGTAACTGGAAACCGCACTACTTGTCACATGTCGGTAATGAT GAAAAACCACACAAATGTCAAGTTTGCAATCGTGGATTTATTCGGCCTGA CTATCTTGCCAAACACATGGAAAAGATACACGGTGGTGTTTCTGGTGCAT CAGCTGCAGTTAAGAAAGAAGAACCGGCTTTGATGAAGATTGAGCAATTC ATATAATTCTTATAAACACAACTCTTTTTCGTTATTTCTTGTATTTAGTC TTTGTGAGTGTTGTTATCTAATGTTGGGAGAGTTGAATGGCAAGGTTCTA TTTGTACTTGAAAAACTTTTCTAGACCCATAAAATTCCATGTCCTGTTTT AGAAGAGAAAATTGTCTGGGTCGAGTCACGGAAAATCAGATGGGCACACA ACGCACACATTGAAAGTCATCGAAAGCTTTGAAAACCCATACACCAAACT GATTATTGTCTGTAAAGTGTGCAACAAAGAAGCCTCAAAATTCCAACGAA ACTGGAAAACTCACTACATGACACACTTTGGGAATGACCAGAAACCTCAT CAATGTCAAATTTGTAATCATGGATTTGCATTCCCAGGCGGCCTTGCAAA ACACATGGAAAAAGTTCATGGTGTATCTTCAACGTCGACCACTCCTGTGA AACAAGAACCACCTCTTATGAAGATGGAATCATTCCTCTAAACTGCTGAA ACCCAATTTGTTGAGAGTTGACTGCTGGCTTTTTGAAATTCTTGTCATTT TATCTTTATTTTCATTCTTTTTGTCTTTAGTTTCAAACTGGAGGAGGTAC TACAACTTCCAAATCAAAGACAACTTACACTGCCAGTTTGAAATACATTG AAAATTTTGATAACCCTTATGTGAAAATCATCCTTGTTTGCAAAGTATGT AACAAGGAGCAAAGCTTGAAATTTGCGCACAACTGGAAAACACACTACCT TCAGCACGTAAGCGAAGATGAAAGACCTCATAAATGTAATATTTGCAACA AGGGCTTCATCACCGCCCCTCAACTGAAAAAGCATATGAAACAACACGAC AAAAAGCCAAAGAAAGAAGATGTCAAGCCGTTTCAGGAAAGCCACCAACA GCAATTTCAACGGATGCAACAACAGCAGTATGGCCAACAAAGCAATCAAC ATTTCCCTACATTCAAGCAGGAGTTTTGAGCTAGCTATCATCTGTCTTTG TTCATATTTTCCTTTCCTCTGCTCCTCGTTCATTTTGTACATGAAAATGT GTCATATTCTTCAAGCTTTGATCTGTTTATGGTAGGGTTAGACTGCATTG TACTTATTTTTATTATATATTTATTGTGTTGGTTTGTGTTGGTGTTTCTT CGACATAATTTTTTTTTTCATTCCATATCATTATTCTAGGGGAAAAAAGC GAAATGCCGTGTGATTTCTTCTTCTCAATCCAACAGTTCGTCTTCCATAG TCAGTAGCTTGAAATATCTGGAAAATTTCTCCAACCCTTACGTCAGGCTC GTTGTACTCTGTAAAATCTGCAGCAAAGAACAAACCATGACAAGCGCTGG GAACTGGAAACAACATTATTTTACTCATGTTAGCGAAGAAGAAAAACCTC ACAGATGCGACATTTGTCACAAAGGCTTTATCACGGCGCCGCATTTAAAA AAGCATTTAAAACAGCATGAGAAGAAAGTCAAAAAGCAAAAGGAGGATAC GGCATTCGAAAACCATGCGAACATAGTCCATCAGCTACAATGTGAACCAA TATATCAGTTCCAACAACAGCAACAGCTTAGAACCGACTTTCTGCCTCCT GAATTTGACTCTGGAATCTGAAACTTGAAAAATGTTGGAAGCTTACTGAT GTGTTCTTTTTCCAAATATTATTAGCTTTTTCTTATGATTACTCTCTTTG AAGCTTATCCATTTATGATAGGGTTAGACTGCATTGTTCTTAGTTTCATA TGGCATTATTAGAATTTGAAAATTTTGATCGTTCTAGGAGAGGAAAGTTA AGACTCGCAACACCACACCTCAGTCTTCTAACTCGTCGTTTATAGTCAGC AGTCTGAAATATGTGGAAAATTTCTCCAGCCCTTACGTGAAGCTTGTAGT CGTTTGTAAAATCTGCAGCAAAGAACAAACAATGACCAATGCTGGGAACT GGAAACAACATTATTTCACTCACGTTAGTGAAGAAGAGAAGCCTCACAGA TGTGACATTTGCAACAAAGGTTTCATCACGGCCCCCCAATTAAAAAGACA TTTGAAGCAGCACGAGAAGAAAGCCAAAAAAGAGGAGAAGATACAACTCC CAAGTCAATTACCAGAACAGCGACCTCAAATTCAAGAACACATACCGTCA CATCATCAACAACATTTCCTAAATAATCAATTCTTTCCCGGTCTTAAGAA CGAGTTGTAGATTTTTTTTTCTTTTTGAAGTTTTCAACTTTTTATGATAG AGTTTTGAACTGCATTGTACTTTATATTATTATGGCTATCCTATTTGATT CCTCTTTTGTCCATCTTAATTGTTCTAGGAGAGGAAAATCAAACCTCGTA CCAACATGCCACAGTCTACAACCTCGTCATCTACAGTTAGCAGCTTGAAA TATGTAGAGAACTTCTCAAACCCATATGTGAAACTTATAGTCGCGTGCAA AGTCTGCAACAAAGAGCAGTCAATGACTACCACCAGTAATTGGAAACAAC ATTTCTTCACGCACGATGGCGACAAACCTCACAAATGTTCATTATGCCCA AAATCATTCATCAGGCCTGATCAGTTGCGCAAACACAAAGCCAAAGTCCA CTCTTCGGGGACGGCTACCAATGTCAAAAAAGAGGGAATCAAGTCGGAAC CTATGAAGGAAGAATCAACCGAAAATCCTTCTTTTACGCAACATTTTCCG TTTTGATTTATACCCATTGTTTAAAAATATTGAAAACGGTCGCTCAATGA ATTTCGTTAAAAAATATATGGAGCAACTTGCTCGGAACGTTGAATTGTAC AAAAATTTTGGGGTTGAGTTGCTTTTTCAAAGTCTTGGTTGATTATTAAT GATAGGGTAGACTGAATTGTAGTTCGTTCATATTTTCATGGGGAGTATGC TTTTTGTGCAACATCGTTATTTCATCAAAAGTTGTGACTGGAAACGCCAT TACTTGACGCACAGCGATGACAAACCTCACAAATGTTCCATGTGCCCAAA ATCATTCATCAGAGCTTATAGACTGCGAGAGCACGAATCTAAAGTCCATT CGTCTGTTACAATTGCAAAAAATGTGAAAACGAACGGAAGGAATGAAGAA CTTACCACTTATTCTTACTCCATTGATTCTAATCCGTTAGATTAAATCAA ACGAGGTCGGAAAAGTAATTGACCACGAAACGAAGTAACCAGCAAAATTG GAGGAATTTGAGTTCTGGAGTGATGTTTTGTTTTGACGATAATTTATTTT CTGATATTTGTTTCTCTTGAAGTTTTCCTCTCGGCATCTTCGTCTGTTTA TGGTAGAGTAGACTGCATTGTACTTACAATACAACATTTATTTTATTTAT TTTGGCATTATTAATTTTATTTTGGCATTATTAATACATTTGATGTTATA TCGTCTTGTCTAGGAGAGGAAAACTAAAGCTCGTACCACGCCTACAAGCT CAAGCTCGTCACCTATGGTTCACAGTTTAAAGTACGTGGAAAACTTTTCA AACCCTTACGTTAAGCTTATAATCGTATGCAAGACATGTAATAAAGATCT TTCTTCTGCGAAGCCTGGTGACTGGAAACGCCATTACTTGACGCACAGCG ATGAAAAACCTCACAAATGTCCAATGTGCCCAAAATCATTCATCAGAGCT GACAGGTTGAGAAATCACCAAGCTAAAGCTCATTCTTCTGACATAACTGT CGCAAATGTCAAAACAGAGGAGTTAAAGGAAGAACCTGTAAAGCAAGAAC CTGTGGTCAATCCCTACTTCACGCAACAATTTGATTATTTCTGAATGGTA TCTTGCTAGATGGAAACTTATTTCAGCAATATCAACTTATTTTAACTAAC TCAGCGGAAGCAATTTATTTCATCAATAGCTTTGCGAACTTTTTATGATA GGGTCAAACTGCATTGTACTTATAATACAAAATGTACTTTATTTATTTGG GCATTCTTACTACATTTGACGTTATATCGTCTTCTCTAGGAGAGGAAAGC TAAAGCTCGTACCACGCCTGTAAGCTCAAGCTCGTCACCTATGGTTCACA GTTTAAAGTACGTGGAAAACTTTTCAAACCCTTACGTTAAGCTTATAATC GTATGCAAGACATGTAACAAAGATCTTTCTTCCGCAAAGCCTAATGACTG GAAACGCCATTACTTCACACACAGCGATGAAAAACCTCACAAATGCTCAA TGTGCCCAAAATCATTCATCAGAGCCGACCAGTTACGTAAACACAAAGCC AAAGTCCATTCATCTGGGACTGGTGTCGCAAATCTGAAAAATGAAGAGCT CAAGTCAGAGCCTATGCAACAAGAAAATTACACAAACCCTTATTTCCTGC AATTTAATCCTTCATGATTGTTTAAAAATTTATATCCTAGTAGACCCTCT TATGAGAAAGTTTTGCTGTATAGTTTGTTGTAGACGTGCTGTGTTTTCAT TCAGTGCAAACCATTTCGTTTTAATTATAAGGTTATTGGACGTACTCCTG CTAATGCATCGACAGCTAAGTACATTGAAGCTTTTAACAATCCGTATGTG AAAATTCTGTTGGCGTGCAAGATTTGCAGTAAAGAGATGCCGATTAAGTA TCCGGGTAACTGGAAGCAGCATTTCCTCTCTCATTCAGATGCGAAACCTT TTCAATGTCAACATTGTGAGAAATCCTTTATCCGTGGTGATCGTTTGAAA AACCATATTGTTAAACACCATCCAGAGGTAGCTCCTCCTCCAACTAATAC TAAGCAGTCTGGTGAACCAGGTGTCAAGGCTGAGATTGATAACATTGCTG TCAAACAGGAATTTCAGCCTCTGCCGTCAGTCCCTACCATGCCATTCAAA ATGGAAGGTAGCTTTCAATGGAATACCATCGCTAACAACCAGTAGTTAAT AAGCTCCAAGGACTCGAAGAGTAATTTAAAAAGATATATTTTTGATATAA ACCCCTTTTTTATATGGAATGTTTTATACAAAGTTTTATAGAAAAATCCT CTATTTTGAATGTCTCTTATGAGAGAGTTGATGCTGCATAAGAAACATAA CAACCCAGTAATAAGACCATTACTCCACCCGAGGACTATTGATTATTTTT AGAAGAAAAACCGAGGCTTGAATCCTCCACCAGGAGCTGGAATCTCGTCG ACTACTAACGCAGGAGCTGTCAAATATGTAGAAAGCTTTGAGAATCCCTA TGTCAAGATTATTTTGGCCTGCAAAATCTGTAGCAAAGAAGTCAACATGA AGCGGACAGATACGTGGAAAGTTCATTACTTCACGCATATTTCGAACGAG AATAAACCACACAAATGCCCTCACTGTGACCAAGGTTTCATTCAACCAGC ACTGCTCAACAAACACATGCAAAAGAAACATGGTGTGAAACAAGAATCAC ATCTTAAGCAAGAAACGAAAACTACAGTCAAACCTGAGCCATATCTTGGA TTTTTTCACTGATCGGCATGATTGTATGAGAGAGTTGACTTTTCTTCTTA TTTCTTCACTTTAATATAGACTATACAACGTTTTATTTGTTTCCTATTAC TTTCTGTAGTCTGGTGGTGGTGGGCGTGTCAAAGGAACGCCTAAAGCAAT TTCCGGTACAATCTCAACAACCAACAACCGTATTCAGCCTGGCTCAAACA ACTCAGCTTTGCATATTNCGGTACAATCTCAACAACGAACAACCGTATTC AGCCTGGCTCAAACAACTCAGCTTTGCATATTGTGGAAAGCTTCAATAAC CCATACGTGAAAATTGTCCTCGTTTGTAAGATTTGTAACAAAGAAATGTC CCTTAAGTTCTCGAGTAATTGGAAGAAACATTATTTAACGCATTCAAGTG ACGCGGATAAACCCCACAAGTGCCAGTCTTGTGGTAAAGCACACATTACG GCGACAGCATTACGTAATCATATGATCAAAAAACACGGTACCGAAGACAT GAAACCCACCATGATTAAACCAGAAGTGAAATCAGAATCGTTTATCCAGC CACAACAGACTCGTTTCCCATACAATCAAGAAGNTGATTAAACCAGAGGT GAAATCGGAATCGTTTATCCAGCCACAACAGACTCGTTTCCCATACAATC AAGAAGCTTTCCCTAAACCAGAACAACATTTTTGATCTCGTTTTTGACCA ACTTAAGAGAGAGTTGGCTTTCTAGTTTATATGATTTTATTGTTCAAGGT GTTTTGTGTTTGATTTTCGTTTTTATCTTTCCTTGTTTAGCATGGTTTTG CTAAGAAACCAACAAGCGGTTTAAGCGACTTGAAATTTCTGGAAACTTTT GACAACCCTTTTGTGAAAGTATCCGTGTTTTGCAAAGTGTGCAGCAAAGA GCAATCACTGAAGTACCAACACACTTGGAAAAGACATTTTCTGACTCATG CATCTGATACAGAGAAGCCTCATAAGTGTCATATTTGTCCGAAATCGTTC ATAAGAGTCGCTCAGTTACGCACGCACTTGGCCAAAGCCCATTCTATTGG GACAGAACTCCTCGGAAAAAAAGAAGAACCCATGATGCAATTCAAACAAG AGCTTTGACATGCTTCTAGTAAAAATTCTTATGAGACAGTTGACTATAAT TGCCGTTGTAATTACTTGGTGACTGTTTAACGACGTTTGATATACACCCT TCTTTGTGTACCTTTGAGTATTGATTTTGTTTAGCGTGGAACTCCAAAGA AGGTGACTAATGGTTTGAGTGATTTGAAGTTTCTGGAAAATTTCGACAAC CCCTTTGTTAAAGTTTCTGTGTTCTGCAAAGTTTGCAGCAAAGAGCAATC ACTGAAGTATCAACACACTTGGAAAAGACACTTTTTGACTCATGCATCTG ACTCAGAGAAACCTCATAAATGTCAACATTGTTCAAGGTCGTTTGTACAA TCAACACAACTCAAAACTCATATGAAGAGTGCACACAAGCATTCGGTGAA AGTTGAAGATGCCTCTAACAGCTTTGTGAAGATGGAACATTATTGAGATT TTTGGAATTTATCGAGACTTTGACCTTCTATGTGGCTGAATTATTTAGTA AAAAGGTTAATATGAGCCTACAGTTATGATCTAAAGCAGTGACACGTCTT TGTAAAACCTCTTATGAGAGAGTTGACTGTATTTGTTACGATATACCGTG TACTCTACCTGTCAAGTATATGCTTTCTTTTGTTTTGACTTTGTGAACTG ATTTTGTTTAGCGTGGACCTTCAAAAAGAGCAACAAACGGTTTGGGTGAT TTGAAGTTTCTAGAGAATTTTGACAACCCTTTTGTTAAGGTTTCTGTGTT TTGCAAAGTGTGCAGCAAAGAGCAATCTCTCAAAAATGAATCTCACTGGA AAAGACATTTTCTGACTCACGCATCGTCCGACGAGAAACCTCATAAATGC CAACATTGTCCAAAGACATTTGTGCAAGCAACGCATCTTAAGAATCATAT CAGGACTATCCACAAAGATTTGGTGAAAGTTGAAGATACATCTAAGGGTC TTGTAAAAGTGGAACTATTTTGAGAACTTTCAAATTGTATTGGAGTTGTC TTGCTTGAATAATAATGTCGTACTGTCTTTTTGGGTTAAATGAATTATTT GGAGGAAGACCAGACGTCATTTGTACCTGAGGCGTGGCTTGGTCTTACTA GAAACACTTATGAGACAGTTGACTGCAATTGCAATAGGAATTTCACTTTT AAAATCGTCGTCTCAAATATCTAAGGCGTGTTACTTTCATTACTTTTATT GGTAGTATCACTTTGACTTTGAGCACTGATCTTATTTAGCGTGGACCTCC AAAGAAAGCCACAAATGGACTGGGCGACTTGAAATTTCTGGAAACATTTG ACAACCCTTTTGTAAAGGTATCTGTGTTCTGCAAAGTGTGCAGCAAAGAG CAATCGCTGAAGTTCCAATCCAATTGGAAAAGACATTTCTTGACTCACGC AAAATCTGAGGAGAAACCTCACAAATGCCAGCATTGCTCGAAATCGTTTG TGCAATCAACACAACTCAAAAGTCACATGAAAAGCGCTCACAAAGATTTG GTGAAAACAGAAGGTTCACCTCATAATTCTGTTAAAATGGAACCATATTG AAACTTCTGGAAACTTTAAAGGTTGTTTTCGCTAAATGTGCTGTTCTAGC TTTCCTCTATTGACTGCTCAATATTCATGTTATTTGTCCACTGCAATTCA ACTTGTCAGCTCTTTCGTATTCTTAAGATCCTTTTATATTGCCCGACTAT ACTATCTTGTCTTTTTTTGGCAGAGTAACTCAAAGAAAAGTAGTGGTCTG AGTGACTTGAAATTCCTCGAAAGTTTTGATAACCCTTACGTCAAAGTCTC AGTATTCTGCAAAGTGTGCAACAAAGAGCAAAGCTTGAAATACCAACACA CTTGGAAACGACATTTCCTTACTCACTCAAACCGTGAGGATTTACCGAAT AAATGTCCTACGTGTGGAAAGGGCTTTATCACAGCACACGACATGAAGAA ACACATTGAAAACAGACACAAACCTAAGAATGATCTGATGAAGATTGAAC AAAAGTTCATTCCAGATTTTCACCAGACTAACTTTCCACCAATGTGAGAC GGTATGACGGTATTCAAAGTAAGCTTTTGACACCCAGCTTGTGTTCCTTA TACATTCGACTCTCCAAAAAGACGTTCATTTTGTTTCTATTTTTTTCAAT CTTTCTGGCCTACATCTTATGTCATAGATTTTATTTTTGTTTACGTATAG CGAAATTATTTTTTTGAATTAGTGACTCAGTTATCAGGCTATCTTTTCAT AGGGTTATACATGCGTTTGTTTTCCCGACCCTTGCCTACTCCCAACTGTA CCCTGTCCGATTTTGCAATATTGTGACACGAAAACTATGAAATTCCAAAG GCTTGGACATTTTGAATTCTGTAAGCGTTAGCTCTAAACCTTGTGTCGTT GACAAAGTTTTTTTTTCCTTTTTGACGATTCAGACTTTTGAGAAAATTAA TCATGAGACTTCGAGCTTCTCGCTGTGTTCACGGCTTCATAGATCATGTT TTTATTTTATTTTAGCATTTAACCCTCATTTAGTGTGTAGTTTTAACCCT CAGAAAACTATGTACATAAAACTGAAATATTTATAGACTTTTATTTTACT TTATCTTCCGCATATTATGGGTTGTAAATATTATTTTTAGAGTAGAAGGA ACATTCTATACAAAATGTTTTGGTTGGTCTCTTCTTCAGCTATCAGAAGC AAATTTGTGGAATGAGTAAGTCCTGAAACTAAAATTAGCTTGATATCTAT TTTTGACAAAAGCAAGTGCTTGGACTTGTGTTGAGGCCGAACGGAACATA GAAGTAGTTTTTTGTTTTTAATAGCCACTGTTAAAAAGCTTACCTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033387XLOC_033387Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052839-exon-scaffold_220-1575043694:170439..170720TCONS_00052839-exon-scaffold_220-1575043694:170439..170720Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1575043694:163863..164012TCONS_00052839-exon-scaffold_220-1575043694:163863..164012Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1575043694:163491..163655TCONS_00052839-exon-scaffold_220-1575043694:163491..163655Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1575043694:163076..163309TCONS_00052839-exon-scaffold_220-1575043694:163076..163309Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1575043694:150023..151147TCONS_00052839-exon-scaffold_220-1575043694:150023..151147Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1510915933:170439..170720TCONS_00052839-exon-scaffold_220-1510915933:170439..170720Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1510915933:163863..164012TCONS_00052839-exon-scaffold_220-1510915933:163863..164012Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1510915933:163491..163655TCONS_00052839-exon-scaffold_220-1510915933:163491..163655Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1510915933:163076..163309TCONS_00052839-exon-scaffold_220-1510915933:163076..163309Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1510915933:150023..151147TCONS_00052839-exon-scaffold_220-1510915933:150023..151147Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1491911889:170439..170720TCONS_00052839-exon-scaffold_220-1491911889:170439..170720Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1491911889:163863..164012TCONS_00052839-exon-scaffold_220-1491911889:163863..164012Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1491911889:163491..163655TCONS_00052839-exon-scaffold_220-1491911889:163491..163655Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1491911889:163076..163309TCONS_00052839-exon-scaffold_220-1491911889:163076..163309Clytia hemisphaericaexon
TCONS_00052839-exon-scaffold_220-1491911889:150023..151147TCONS_00052839-exon-scaffold_220-1491911889:150023..151147Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:150023..170720 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.08157 1.13913 7.08643 10.0883 18.3079 13.4659 3.80374 4.97087 1.55943 1.65385 1.34605 2.27144 1.70632 1.85844 2.62199 3.07172 2.6522 3.23083 1.48075 1.00046 3.82278 3.57096 8.34914 6.49274 4.1709 4.72092 2.2892 3.18346 5.83101 6.84503
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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