TCONS_00052842 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052842
Unique NameTCONS_00052842
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1077

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052842 ID=TCONS_00052842|Name=TCONS_00052842|organism=Clytia hemisphaerica|type=transcript|length=1077bp
tcattttctaaaataattttactttcaaCTATGGCTGATGGAAACCAAGG
TGACCAACAATGCTCTTTTGGTATCAAGAAAATAGTTGATTGTAAGATTG
ATCAGaCTGGTAAACAACTGTACAAGGTGAAATGGGAGGCTACGTGGGAA
CCCGCAGACAGTCTCTCAAGTTGTCAGCATTTAATCGATGAATTCTGGGG
TTTTGTCAACAAAGCAAAAACAAATGAAGATATAGCACAGCAACACAGAA
AACGGATGAGGCTAGACCCATCTGCAGGACAAAATGGCACAGTTGGATTA
GGACCTCATCACATGTTAAGTGAAGATAGTAAAGATGAAGTACAAAGGCT
AATTGCAAGGACAAATGCTACTCAACCAGGAAGTCTAATGACTCCTAGTG
ACTTATTGAACACACAACAGAATCAAATGGGTGTGCCCAGGACTCCAACT
AGAGCACCTCAATCTCCATTCGCTCAAAATACACGAATGCCTTTCTCACA
AAGTCCTGGTCAGTTtaaccaacaacaacaacagtttGGATCGCCACAAA
CTGGCTTTCCAAATCAATCTCCCATGAGTTCCCCAAGCACACGTGGAAAA
GCACCTGGGTTTGGAAAACCTGCGTCCAATATCAAAAGTGAACAAGATGA
ATCTGAGAGGAAAGTTAAGACTCGCAACACCACACCTCAGTCTTCTAACT
CGTCGTTTATAGTCAGCAGTCTGAAATATGTGGAAAATTTCTCCAGCCCT
TACGTGAAGCTTGTAGTCGTTTGTAAAATCTGCAGCAAAGAACAAACAAT
GACCAATGCTGGGAACTGGAAACAACATTATTTCACTCACGTTAGTGAAG
AAGAGAAGCCTCACAGATGTGACATTTGCAACAAAGGTTTCATCACGGCC
CCCCAATTAAAAAGACATTTGAAGCAGCACGAGAAGAAAGCCAAAAAAGA
GGAGAAGATACAACTCCCAAGTCAATTACCAGAACAGCGACCTCAAATTC
AAGAACACATACCGTCACATCATCAACAACATTTCCTAAATAATCAATTC
TTTCCCGGTCTTAAGAACGagttgtag
Run BLAST on NCBI

transcript from alignment at scaffold_220:157211..170543-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052842 ID=TCONS_00052842|Name=TCONS_00052842|organism=Clytia hemisphaerica|type=transcript|length=13333bp|location=Sequence derived from alignment at scaffold_220:157211..170543- (Clytia hemisphaerica)
TCATTTTCTAAAATAATTTTACTTTCAACTATGGCTGATGGAAACCAAGG
TGACCAACAATGCTCTTTTGGTATCAAGAAAATAGTTGATTGTAAGATTG
ATCAGGTAATGCCCGAAATTTCTATTCAAGTTCTTTGGGGAATAAGTTTG
CAGATTCGTGTGTTTACATTCTTTTATGATTCCTCCCATCGGTGTCATGG
CACTAAAAAACCCATTGTATTTGCAAATGAATATGATATGAAATACTTTT
CTTCTGTCCATTCCATACAGACTTTATTTCCAACTGTTCAAAAAGCTCTA
AAATAGCATCTAATAGCATTACAGTAGAATATGATCCTTCAATGCAATGG
CCACAAAACTATAAAGTGCATTTTGTTTTGCGTGAGGTCTATTTCTATTA
TTTCTATTTCTATTTGATTGAGTTGCAGGAGGCTTTGAGGCCTTTTTTCG
CAACTATAAGACGCTTTCAATGAGCGCCCCGTCAGCACCTTGGACTGACT
ACCCAATTCCCCTCACATGGCATGGGTTGACCCGGGCGAAGGTTCATTCA
CTTGCCAAGTGAACCGCTGCGAGTGGGAATCGAACCTCAGTCGCCTGTGC
AGTAACCAAGGCCAGACGGTGTCAATCGAACGAATCGAACGCCGAATCAA
TCGAACGCAATCGAATATTACCCAGGATTTTCTGTTCGATTGCTTCGATT
ACGTTCGATTGCTTTGATAACGTTTGATTGCATTCGATGCGTTCGATTGA
TTCAATGGTATTAGATTTTATTCGCTTTGGTATGGTAATTAAGCGCTCGG
CCGCCCACGCTAAAAAGCTCAGAGTGATCCAATTTAATCTAATCGCAATC
AAACTCATCGAACATAATCGTAATCGAACGAAATCAAAGATTAATCCAAT
GTCAATTATCAATCAAACCAATCGAACATAGTCAACTATCAATCGAACCA
ATCTAACCTTACTCGAACTCAATCGAACACAATCGAATATTACCCAGGAA
TCGGCCTTTCGATTGAGATTCGATTACGTTTGACAATCGAATCGCAATTA
TTCGATCGTGTTCGATTACGTTTGATTGGTTCGATTGCAATTTTTGTTCG
AAGTTGTTCGATTGACACCGTCTGGCCAAGGTCAATGATCACTATACCAC
AACGCAACGCAACGCAACGCAAGGTCATGATAGGGACTTTTTCTAGCGTG
ATCACATGATTTGGAAATTTATATATATATCTGTGATTGGTTTTCCAAAG
TCAAAACGTGATTGTGATTTGTAGAATGGGCTATTCAAAAAAAAAAATGT
ATAGGGGTATTGAGGAACTTCACTAACCCCTCTGGAAATTTTGGATAACA
AACTATCCCCTGGAAATTAGGAGTCGACGCCCCTGGAAAGTGAAATTTTG
TGAAAAAGGGCCTGGAAAGTGACTATTGATGCCAGTTTAGGAGGAGAGAA
CCCCCTGGAAACCTTTAATAACCCCCTTGGAAAATCTGAAAATGACCAAA
AGCCCCTTGGAAAATCAAGGCTCAGTCTCCCCTGGAAAAGTTCGTCAATA
CCCCTACTATGGTTTAAAAATGGAATAGTCCAATTTTTGAGGCGCAATGA
TGCGTGATTCATGGACTTTTTGAAAAGGGATGCGTGATTGTCAAATTTAT
TTTGTTTATTAGCTAGGGGTCACTCGCATATTGATGCAACCTTTGGACCA
AAATCGGCATCAAAGGGCCTGGACCGGGGTCCCAAAATAATGTGCATTTT
GAAGAACAACCCAAAAGGAAACCTTTCATCCTCCTAGCATTTTAATTTCC
TACCTAGTGATTATTCTCAATCATCTTGGAAGAAATGCTACTTTGTTCAA
GAAAGCAAGTTTTTGCCTGATTTTGCATGTGTTTAGAAAAAAATTGGTAG
GCTCATATTTTTTAAATCACAAGCTTCAATTGGAAGCGTTGCGTAAAATA
ACAGCGCAACCCTGGGGAAACGCTGCGAAAAACCGCAACGTTGCGGATCT
ATGCAATTTGCCGAACTGAAAAGGAGCACGAGACAAACATCGGGCTGTTT
GTTTTGGTTAAGATTGTTCAATAAAAAAGCGAAGCAAACAAATATTTAGT
TACATAAAAGGCAGTTAGGGAAACCATCCAGGATGCTGCCATTCTATAAG
CCAGCAAAAACTAAATGACACTTGTAAACTTAACTTAACTTAACTACTTC
CCAAAGCTGGAGACCAAAACAAATTATCTTATGATTATGGTGGCTTTTTG
GATCTATTGTTAAGGCCATCTAAAATGGTGGAAAGAGTTGAGTGGGTGGT
AACGTCAAAACGCCCAATAAGATCTTCCAACAGAAGGAGAGTTTAGTTAC
CGCGTGAGTTACGTCATGCACTCCAACGCAGTGCACAACGAATGGTGTTT
CAGTGAATATTAATAATTATAAGAATATCTTATGTGCTTAACTTCAGTAA
ACCTCGAGTGCTTCAATAAAGATGAAGAAGGTAAGAAGATAAAAAATGCG
CTGGATAATTTTCATTGTAAAAGTTTGGTCAATCATTGCTGAAAGCTTGA
AAAAGTTTTTCCAATACAAAAAAAATTTCAGCCCATTAAAAGCAGTGTAC
TTATACTTACTTTGTTTGCTACATTGTCTAGACTAAAAAAAGTGAGAAAA
GACACAAACATACAGGGTTCGAATTATAAATTTTATGACTTATGAGCTTC
GCTATTTTTCCAGTGTTTGCAAAGCATTTTGAGTATTTTGCGATGTAGAT
TGGAAGAAAATGCGAAAGTATCTTCAATTCATTTCTCTAGAAAAGCGAAG
TTAGACTTAAAGTAAGAGATTATAGACAAAGCAAAGTGCAGTTTTGAAGT
AACGAGTAGATAAAGTAGATAAAGCAATAGATAAACAAGTGAATAAAGTT
GTTAGTTTATAAAGCGATAGATAAAGGAATGAATAAAGTAGCAAAGTGGC
AAGTAGATAAAGCAATGAATAAACGAGTGAAAAAGTAGTAGATTTGATAA
AAACAATAGATACGAGTGAATAAAGTAGCAAAGTAGCAAGTTGATAAAGC
AATAGATAAACAAGTGAATAAAGTAGCGAAGTGGCAAGTAGCTAAAGCAA
TAGATAAACGAGTGAATAAATTAGCAAAGTAGTGAGTTGATAAAGCAATA
GATAAACGAATGAATTTTCAAATGTGTTTATTAGATTTATGCTCAAAGTC
ACGCAAAAATGACAAAATACAACCAATAACATAAGGAAGATGATGGATTA
ATGATAAAAAAGTAAAATATTCTGAAATATTATATATATTTTTTTGTTTT
ATTATTTTCCAATCAAATAAATGTTGAAAATTTCTCTTAGAGAGATAACC
CCAGAGAAATAACTGACCCTGATTGAGTGAACCCCTAATTAGAAATTCTC
AACCCAATTTACTACTACGCTTACTGTGCTTGTATCTTGTCCCATACAGT
ATTCAGCAATTTTGAAACTTGGCAACTATGTTCTCCCGCTTAAAAAAATG
TCCTCGAAATTCTTTCTCCCGTATTTTCTATAATACACCTTTCCCATAAT
TTTAACTTTGGCTAGACTCTATCACTGGATACAATCACTAACTTTCTAAT
CAATGACCGATCTCTCAATAATCAAGGTGATAATAGAGCCTACTGTAAAA
TCCTGAGTGTTGATAATTGATCATTGATTGGTTTTTTCATCAATCTCAGA
GCCAATTGATGAAAATCAAAAAAAAAGATTACGTTTTTTTTTTTTAAGCA
TTGCACTTGTAAGCATATCTAGGCTCAGATATGAGGAAAAATTAAGCATA
CGGAAGCATTACTTGAGCCTACGAAAAGTGTTTTTTTCCTGATTTTGTTT
GTTTCTGTTGTTCTGTATTTATCATAATACTCCCCCCACTAGGTAGAGGA
CTGAATATACCCCCTATTCGCCTTTCTCTCCCCCCCCCATCTTCCTGGGG
GGGGGTGATCCCATGGAAAGCTAGAACAATTTCAATCTAAATTGATTTAC
AATTAAATAGAGGTTTTTGGGAAATAGTTCTCTGGTGTTTGGTATTGAAA
ATCAAGGCTAAAAATCAGATCATATTTCTAAAATCTACAAATTAAATTTT
TTTGGAAAAAAAGCTTCTAATTTTTTGGGTAGCAGCTGTAAATGATAGAA
CTTTATTTGGCTTGCAGCTGAAACAACTAAATAATCACATTAAATAATTC
AATCAAATTGTAAGTCCACGATAATTTAGTTAAAACGTTTTAATTAATAC
ACCATTACTTATTACTGCTTATTATATTCTTTTTGGACCTACCCCGGTGG
AGGTCCTATAAATTAACCTTTGTCCGTCCGTCCGTTAGTTACCAGCTTTT
CTCGAGATTGGCTCATTAGTTTTTTCTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAAATTTTGGGGTATATTTCAGCTAAAAAAAC
GTGACCTAACTTATAAACGTGTTAAATGCATAATCCAGGTAGGTCCATCA
AAGTATCACTTGTTATTTTTTATTTTACTAGACTGGTAAACAACTGTACA
AGGTGAAATGGGAGGCTACGTGGGAACCCGCAGACAGTCTCTCAAGTTGT
CAGCATTTAATCGATGAATTCTGGGGTTTTGTCAACAAAGCAAAAACAAA
TGAAGATATAGCACAGCAACACAGAAAACGGGTATGTTTTAGTTCTCTAG
TTTTTCCAACACCTTTCCTCCTACCAGTTTATTCCATTTTAGTGTCTTGT
CATTGAACTTATGGTCCTCTTGAATCAAATGAAATAATTGTACAACAGTT
TTTTTCATGAAGAAACAATATAAAATTTTCCTGAAGTTTGTTTTGTAACA
TTACCATTAAAAATTACAAACTATATTTTTGTTTAAAGATGAGGCTAGAC
CCATCTGCAGGACAAAATGGCACAGTTGGATTAGGACCTCATCACATGTT
AAGTGAAGATAGTAAAGATGAAGTACAAAGGCTAATTGCAAGGACAAATG
CTACTCAACCAGGAAGTCTAATGACTCCTAGTGACTTATTGAACACACAA
CAGGTAAGAATAAAAATATCTCCTTTTTATACAGAAGCTATCTTGAGTTA
ACTTTCTTAGAGGCATATGTTGATAGTGAAGGTAAAGGATACTTCAACAA
AATAATTTTAGAAAATTAGCAAAAAAACTTTTTGTGAGTATATGAAAAAA
TACTGATTTAATAGCATCAATATTTCTGTTACAGAATCAAATGGGTGTGC
CCAGGACTCCAACTAGAGCACCTCAATCTCCATTCGCTCAAAATACACGA
ATGCCTTTCTCACAAAGTCCTGGTCAGTTTAACCAACAACAACAACAGTT
TGGATCGCCACAAACTGGCTTTCCAAATCAATCTCCCATGAGTTCCCCAA
GCACACGTGGAAAAGCACCTGGGTTTGGAAAACCTGCGTCCAATATCAAA
AGTGAACAAGATGAATCTGTAAGTCCCCATTTTATTCACTTTCGCATGGA
TTTTTTAGAGCATACAAGTAGTCTTTTGGCTTCTGATTATAATAGCTGTT
AAATGGTATGACCGTTATAGTCAGAACTTTCAGTGGAGTTTTAACAATAA
CAAAGAATCTTACCTTGCTAATTTTTGTATCTCCTAATAATAACTCTATT
TTAATGCATTAACCTAAAAGCTTTTGAACTTTTACCCCTATTAATTTTAG
TCTAATTTCGAACCCTAAGTTAGTTTTACTTGTGAATTGTTAGTATAAAA
AGTACCTTGCAGTCAACTCTCTCATAAGAGGTAAAGCTAGATCAGCAAAG
TTTCAAAACAACCTCCCTTTCGTTAGATTTTGAGCTTTTTACAAAGCTGC
TTAAAAATGATTTTGAATTCAAAACATTTTAGAAAATGCGCGAAAAAAAT
GCGTTTCAAAACCTCAGTTGATTTTTTGCATGCGTCTTGTGCATTTTGTG
CCCTCTTGTTGATGTCCAGTTGCAGATTGGTTGCTGGTGGTAGATGATTC
GATCTCTTGTGAGAGGGAGGACTGTGGAGGAGGTCTCCTAGCTTGTGAAG
TGCACAGTTCGAATCAGCAAGTCGTGGAAAAGGCATGTGAAACAAGAAAA
ATGTACTCTTTTCTAGAAGACAACCACAACTACACAAAAAGGAGGAGAAT
CTAAAATCTTGGAAGCATGGACCAACCCTTACGTAGAGTTGCAATTCCTC
TGTCGCATTTGCAAGAAACCCCAGGCATATAAGTATAGGCGTAACTGGAG
AAGGCACTATGAAAGCCACTCTGAGGAGAAACAATATGTTTGTGATATTT
GTGGTACTGGCTATAAAGCAAATTATTTACTCAAAAACCACATTGCTAAT
AAGCATCCAACAAGTGTGAATCCTGCTGATTCAGCAGAACAGGAGTTTAA
ACCACAGTCTGTTCAGGTCAAGCAAGAACAACAACCTGAATCAGACGAAC
CCTTTTATTTAAATTTGTAATATCTCCCTGTCTAACGAAAAAGTTAATAT
TTTCTATGCGTGTGTTACTATTAAAAGTATAAAGTATTATTCAGATATTT
ATGTAAATATGTTATGATGAAGTGTATATATTTTAAAACTATTTATTTTT
ATTTTTGTTATTAAACCTGTAGCTTATATATTATTGAAATATTTTTTTAC
TCTGAAAGTGGAGGTTGCTTTGTCACTGAAGCTGTCATTTTTTTCTATTT
TTTGCTAGAGAAGATATTTTGTTTATTTTTTATGTCCCATAGAAATCCAA
TGTTAAGAATATTGTGACGCAAAAAGCTGCTGAAGACTTTGAAAATCCGT
ACGTCCGCATTGCTTATTTGTGTCGAATTTGCAGCAAAGAACAATCTAAG
AAGTTCAAATTTGATTGGAAGAGACATTATCTCACTCATAACACTGAGCC
CAAGAGCCATGTTTGCCACCTATGTGGGAAGGCTTATAATCAGCTTGGGC
ATTTGAACAAGCACATGAGGCAAAAACATCATCAAGAAAGTCCTGATGTT
GTTTTTAAACAAGAAGTTAAGGCCGAATTCCATTCTGAAATTCTTTAAAT
TACAAATTGCTGTTTTAGCTGGTTTTAGTACTTTTTGTTAACACCTTGCT
TTTCATTTTATAGCTTTCCCTTTTCAATAGTTAATTTCATTTAGTTGATG
ATATATTTTATTATGCTTATTGTTACAAAATATTTTTATGGAAATTTATA
TTTTTTCCAAAGTAGCCAGTTCTAGCCATCTAGTGGGGAGTTGAGTGGAA
GGACTTTTTATACAAAATTAAACTAGATAGGTATCCCATTGATAGCTACC
CATTTTTCAGAAAAATGTAAAGCCATCCGCTGGTAAATCTGAAACCAATC
TTCAGACAATGAAAGTCATTGAAAGCTTCGAAAATCCTTTTACCAAGTTG
ATCATTGTTTGTAAAATATGCAACAAGGAATCCTCGAAGTTTCAACGCAA
CTGGAAAAATCATTATCTATCTCATGTCGGTGATGATGAAAAACCACACA
AATGCAAGATCTGTAATCGTGGATTCATCAAGCCATGTTTTCTCTCTAAA
CATATGAAAAAAGCCCACAGTGGTGCAATGCCAACCTCCGTCAAACATGA
AGAAATGGCTTTGTCAAAATTGGAAAGTTTCACACAATGATAAAGACTTG
TCATCTAAAATCTCTAGTATCAATATTAAGTAGTTTTTGTTAGTCTCTTT
GTTGAGAGAGTTGAATGAAGGTGTTTTTATAAACGATTGGATCGATATTT
TTTACCATCCAAACCTTACTCCGTTTTAGAAAGTGAGGCAGTCTCCAAGC
CAAGGCAAATCAAATGGTCAGACTAATTCGCATACAATGAAAGTCATTGA
AAGTTTCAATAACCCGTATACCAAATTGATCATTGTTTGCAAAGTGTGTG
ATAAGAAATCATCCAAGTTTCAACATGATTGGAAAACTCATTATTTGTCT
CATGTCAGTGACGACCAAAAACCTCACCAGTGCAAGATTTGTAATCGTGG
GTTTATCAAGCCAGGCTTGCTTACGAAACATATGGAGAAGGTGCATGGTG
TGTCAGGATCTAGTGTCAAAAAAGAAGAATTCTCGATACCAAAAGCTGAG
TCATTTTCGGGATATGACTTTTAAAGCAATAGATATTTGTTACGCTGTAA
AAGTGTTGTATATTTGTAAATTAATTTGAACTGATGAAAATTTTTTTTGC
TTGGGAGAGTTGAGTCAAGCCTTTTTATACTGACACATTGTAATCACACA
AGTCATGCTTGCCAAATCTTACTCCGTTTCAGAAAGTGAAGCAGTCTACA
AGCCAAGGCAAATCAAATGGCCAGACCAATCTTCATACTATGAAACTTAT
TGAAAGTTTTGAAAATCCTTATACAAAATTGATCATTGTCTGTAAAGTAT
GTAATAAGGAGGCATCGAAATATCAACGTGATTGGAAAACTCATTATTTG
TCTCATGTCAGTGACGACCAAAAACCACACCAGTGCAAGATCTGTAATCG
CGGGTTTATCAAGCCAGGCTTACTCTCAAAACACATGGAAAAGATGCATG
GTGGTGCAGTAGAGTCATTTTCCAAAAAGGAAGAATTTTCAATACCAAAA
ACTGAGCCATTTCCCAGCCACGACTTTTAAAGTAGTGTACCATATTTTCA
CTTTTAAAAGTTTTGAAATAAAGAAAATTGTAATTATTTTGAATTTATCT
TTTTGGGAGAGTTGAGTGAAGGCATTTTATATTACAAGACCATCGTGATC
ACATTAGTTATGCTAGCCAAACCTTCTTCCATTTTAGAAGAAAGTGAAGC
AGTCTCCTAGCCAAGGAAAATCTGATGGCCACAGTACACAAACAATGAAA
GTCATTGAAAGCTTTGAAAATCCATACACCAAGTTGATCATTGTTTGTAA
GATTTGTAATAAAGAAGCATCAAAGTTTCAACGTAACTGGAAACCGCACT
ACTTGTCACATGTCGGTAATGATGAAAAACCACACAAATGTCAAGTTTGC
AATCGTGGATTTATTCGGCCTGACTATCTTGCCAAACACATGGAAAAGAT
ACACGGTGGTGTTTCTGGTGCATCAGCTGCAGTTAAGAAAGAAGAACCGG
CTTTGATGAAGATTGAGCAATTCATATAATTCTTATAAACACAACTCTTT
TTCGTTATTTCTTGTATTTAGTCTTTGTGAGTGTTGTTATCTAATGTTGG
GAGAGTTGAATGGCAAGGTTCTATTTGTACTTGAAAAACTTTTCTAGACC
CATAAAATTCCATGTCCTGTTTTAGAAGAGAAAATTGTCTGGGTCGAGTC
ACGGAAAATCAGATGGGCACACAACGCACACATTGAAAGTCATCGAAAGC
TTTGAAAACCCATACACCAAACTGATTATTGTCTGTAAAGTGTGCAACAA
AGAAGCCTCAAAATTCCAACGAAACTGGAAAACTCACTACATGACACACT
TTGGGAATGACCAGAAACCTCATCAATGTCAAATTTGTAATCATGGATTT
GCATTCCCAGGCGGCCTTGCAAAACACATGGAAAAAGTTCATGGTGTATC
TTCAACGTCGACCACTCCTGTGAAACAAGAACCACCTCTTATGAAGATGG
AATCATTCCTCTAAACTGCTGAAACCCAATTTGTTGAGAGTTGACTGCTG
GCTTTTTGAAATTCTTGTCATTTTATCTTTATTTTCATTCTTTTTGTCTT
TAGTTTCAAACTGGAGGAGGTACTACAACTTCCAAATCAAAGACAACTTA
CACTGCCAGTTTGAAATACATTGAAAATTTTGATAACCCTTATGTGAAAA
TCATCCTTGTTTGCAAAGTATGTAACAAGGAGCAAAGCTTGAAATTTGCG
CACAACTGGAAAACACACTACCTTCAGCACGTAAGCGAAGATGAAAGACC
TCATAAATGTAATATTTGCAACAAGGGCTTCATCACCGCCCCTCAACTGA
AAAAGCATATGAAACAACACGACAAAAAGCCAAAGAAAGAAGATGTCAAG
CCGTTTCAGGAAAGCCACCAACAGCAATTTCAACGGATGCAACAACAGCA
GTATGGCCAACAAAGCAATCAACATTTCCCTACATTCAAGCAGGAGTTTT
GAGCTAGCTATCATCTGTCTTTGTTCATATTTTCCTTTCCTCTGCTCCTC
GTTCATTTTGTACATGAAAATGTGTCATATTCTTCAAGCTTTGATCTGTT
TATGGTAGGGTTAGACTGCATTGTACTTATTTTTATTATATATTTATTGT
GTTGGTTTGTGTTGGTGTTTCTTCGACATAATTTTTTTTTTCATTCCATA
TCATTATTCTAGGGGAAAAAAGCGAAATGCCGTGTGATTTCTTCTTCTCA
ATCCAACAGTTCGTCTTCCATAGTCAGTAGCTTGAAATATCTGGAAAATT
TCTCCAACCCTTACGTCAGGCTCGTTGTACTCTGTAAAATCTGCAGCAAA
GAACAAACCATGACAAGCGCTGGGAACTGGAAACAACATTATTTTACTCA
TGTTAGCGAAGAAGAAAAACCTCACAGATGCGACATTTGTCACAAAGGCT
TTATCACGGCGCCGCATTTAAAAAAGCATTTAAAACAGCATGAGAAGAAA
GTCAAAAAGCAAAAGGAGGATACGGCATTCGAAAACCATGCGAACATAGT
CCATCAGCTACAATGTGAACCAATATATCAGTTCCAACAACAGCAACAGC
TTAGAACCGACTTTCTGCCTCCTGAATTTGACTCTGGAATCTGAAACTTG
AAAAATGTTGGAAGCTTACTGATGTGTTCTTTTTCCAAATATTATTAGCT
TTTTCTTATGATTACTCTCTTTGAAGCTTATCCATTTATGATAGGGTTAG
ACTGCATTGTTCTTAGTTTCATATGGCATTATTAGAATTTGAAAATTTTG
ATCGTTCTAGGAGAGGAAAGTTAAGACTCGCAACACCACACCTCAGTCTT
CTAACTCGTCGTTTATAGTCAGCAGTCTGAAATATGTGGAAAATTTCTCC
AGCCCTTACGTGAAGCTTGTAGTCGTTTGTAAAATCTGCAGCAAAGAACA
AACAATGACCAATGCTGGGAACTGGAAACAACATTATTTCACTCACGTTA
GTGAAGAAGAGAAGCCTCACAGATGTGACATTTGCAACAAAGGTTTCATC
ACGGCCCCCCAATTAAAAAGACATTTGAAGCAGCACGAGAAGAAAGCCAA
AAAAGAGGAGAAGATACAACTCCCAAGTCAATTACCAGAACAGCGACCTC
AAATTCAAGAACACATACCGTCACATCATCAACAACATTTCCTAAATAAT
CAATTCTTTCCCGGTCTTAAGAACGAGTTGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033387XLOC_033387Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052842-exon-scaffold_220-1575043694:170439..170543TCONS_00052842-exon-scaffold_220-1575043694:170439..170543Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1575043694:163863..164012TCONS_00052842-exon-scaffold_220-1575043694:163863..164012Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1575043694:163491..163655TCONS_00052842-exon-scaffold_220-1575043694:163491..163655Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1575043694:163076..163309TCONS_00052842-exon-scaffold_220-1575043694:163076..163309Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1575043694:157211..157633TCONS_00052842-exon-scaffold_220-1575043694:157211..157633Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1510915933:170439..170543TCONS_00052842-exon-scaffold_220-1510915933:170439..170543Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1510915933:163863..164012TCONS_00052842-exon-scaffold_220-1510915933:163863..164012Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1510915933:163491..163655TCONS_00052842-exon-scaffold_220-1510915933:163491..163655Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1510915933:163076..163309TCONS_00052842-exon-scaffold_220-1510915933:163076..163309Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1510915933:157211..157633TCONS_00052842-exon-scaffold_220-1510915933:157211..157633Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1491911889:170439..170543TCONS_00052842-exon-scaffold_220-1491911889:170439..170543Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1491911889:163863..164012TCONS_00052842-exon-scaffold_220-1491911889:163863..164012Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1491911889:163491..163655TCONS_00052842-exon-scaffold_220-1491911889:163491..163655Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1491911889:163076..163309TCONS_00052842-exon-scaffold_220-1491911889:163076..163309Clytia hemisphaericaexon
TCONS_00052842-exon-scaffold_220-1491911889:157211..157633TCONS_00052842-exon-scaffold_220-1491911889:157211..157633Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:157211..170543 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15625	1.86836	1.6729	1.12464	44.114	30.0152	12.3147	12.3569	4.19137	5.59507	4.38739	5.44856	4.39614	4.12183	3.07948	3.81757	5.90876	6.93409	2.57445	3.16616	6.76765	6.75469	0.953283	3.79556	21.0257	13.7246	2.75872	2.04443	1.43253	1.60638
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052842 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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