TCONS_00052844 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052844
Unique NameTCONS_00052844
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2282

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052844 ID=TCONS_00052844|Name=TCONS_00052844|organism=Clytia hemisphaerica|type=transcript|length=2282bp
CACATTTCTTGTCAAGCAGCAAGCATTATAGACGTTCTATTTAGAGGTTg
aagtttattatttttgttagACAACAATGGGTTTCGGTGAAATATCAGTG
CATCAATGTCGACAGAAAAGCTATCTCTTCATCTTTACAATTGCTTCTTG
TTTCCAAGTCATAATATCATCGTGTATTTTATTTGGTTATTCGTCATTAC
TGGTCATTTTCAAAGACTTACGACTTTACAGAACCTCTTGTGTGGAGAAC
CTTCACGCACAAAACACAACAACTTTAATGACCTTACAACAACAAATACC
AAACCAATCATGTACGGCTAGGGATGAAGCTCTCAATTTGCCGTTTGCTG
TTGgtgttattttcttttcagtGGTCAAAATACCACTTGGAAGTATTATT
GATTCTTTTGGTGCAAAATCGTCACAATATATTGGATGTTGCACTCTGAT
GCTGTTTGGTTTAAGCATGGCTTACATTGAAGAAGgtGTCGAATATTTTG
TTCGTAAAGAATagagcactttcactttcgttatTGAGTGGATGTGTGGA
CGGCTCGAcggtcattttcatcatttttctgAAAATGATGGATGCATTGG
ATGCAAAAATGCTCCATTTACCTAAACCTTAAAGTTACTTTGTTGAATGA
TTCTTGAAAATATTGgatatattttattttggtgTTATGGACTATTGTAT
TGTATGGAAATTTATCAGAAGCATATCACGTTTTCAAGTATTTGTATATC
GTATGCTGTTGGCGCATCATGTATATTGATGATTGCAACAACATTTCTTT
ATCCAACAAAGGAAGTTCTACAAGCGTTCATTGATGTTGAGACTGTTAAC
AACATTCGTCCCCAGCTCTCTGATGATGAAGATACAGATGATGAAAACCT
TGTTGATACAGCATCTTCTCATGTCATGCGATCTCAAGATTTCGCTTCTA
ATTCTATTATGTCAAGTTATCAGATGTACCATGAAGCAATTCACAAATCG
CTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACATTGTTAGCCAGTCT
ATCTGAAAATCTGGCTATACAGTTTTCCAATAGAAGTTACGATGCAAACG
ATCACAAGATACAGTATTTACCGAGCCGACCGTACGGTACGATTATGGAA
GGGTCTGTTGGCTATCAACAAGATTCTTATTCTGCGTCATCACACCTTGT
ATTCAACATAAAAAACAATAAGGAGGACGAAAAGACGCTCCTGTTACCAA
TTCAACCTACCAGGGAAGAGCACCTGACCCCCTACTCAGGACATAAACTA
CGGCAATACATCTTTTCGAAGTTGATGATCTTTGGCACATACACAGCTAG
TGTGATGATGTTCAAGATTGTTTATTTCATCGGAAATTTGGACAAATATC
TTAACAAATTGACCGATACTGAGACAGCAACTTTGTatatcaaatatttt
ggatatgTTCAGTTCGGTGGAATTATCGCTGCACCGATCTGCAGTATGTT
ATTTCGTGAGAATGTGGGAACCGAAAGATTATCTGCTCATCAAGATTTcg
ttaaaaaagtcaaaattttaatCCTTCCTGGTTTTCTTCTCATCTTGTTC
ATCGTGCTTATCGATGTCTTACAACTCGTTCAAAACATTTATCTATCGgT
TCCAATTTTCATTCTGTTTTTGTTTGGGAACAGTTTGGTGTGGTGTTTCA
CTTCATTGTACTTCGCATATCTGTTTCCGGCCAAGTACTACTGCACCTTG
TATGGCATCGCAACGGGAGTATCTGGAGCTGTCTCTTTCCTTCAATATCC
GCTTCTTTCTCTTGAAAATTCTCTTTTCCACGGAGAACAATTCTATACGA
ACCTTCTCATGTTGGGATTACTTATATCAACACTGGTGCTTCCATTCTAC
TTGGTgtatttctacaaaaaattgaaaatggcgGAAATTGAAACTCAAGA
AAAACCTTGACAAGTCTGATATGAATTTCAAGATGTATTTGTTAAGTTGT
TAAAACttgtgaaattattttttggcttaaacTAGTTCCTGGTtatttga
tcaaaaagttttgtGTATATGAAATGTGAGTATATTGAACTGTACTCATG
ATagtttaaaaagattttggcGGATATTTTTATTCGCGAGTTTTAAGATT
TTAACATTCAAAAGCTGATTTGACTTATTCCTGAGTTAATTATTTGTGAC
CTAATTACCTTTTACAGGAGAAGTATGAAATCGATTGTTTCCCcgatttt
aatgttttcatttattttcgaAACCTACGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_220:178327..189889-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052844 ID=TCONS_00052844|Name=TCONS_00052844|organism=Clytia hemisphaerica|type=transcript|length=11563bp|location=Sequence derived from alignment at scaffold_220:178327..189889- (Clytia hemisphaerica)
CACATTTCTTGTCAAGCAGCAAGCATTATAGACGTTCTATTTAGAGGTTG
AAGTTTATTATTTTTGTTAGACAACAATGGGTTTCGGTGAAATATCAGTG
CATCAATGTCGACAGAAAAGCTATCTCTTCATCTTTACAATTGCTTCTTG
TTTCCAAGTCATAATATCATCGTGTATTTTATTTGGTTATTCGTCATTAC
TGGTCATTTTCAAAGACTTACGACTTTACAGAACCTCTTGTGTGGAGAAC
CTTCACGCACAAAACACAACAACTTTAATGACCTTACAACAACAAATACC
AAACCAATCATGTACGGCTAGGGATGAAGCTCTCAATTTGCCGTTTGCTG
TTGGTGTTATTTTCTTTTCAGTGGTCAAAATACCACTTGGAAGTATTATT
GATTCTTTTGGTGCAAAATCGTCACAATATATTGGATGGTATGTACCCCA
ACCTGAAACAAATTGTGTTTTTATTGTCTTTGACATTTTATTCCTGTTGA
GATGGTTCCACATGAGTCTTTTAAGAAAGCGGCGAAATTCTGGTAAAAAA
CTTCTTATTACCCTCCCTCGTCAACCTCGTTCTCTTTTAACTATCCCAGC
TCATACGCTCACTTTTACCACGGTATATCGTTTCAAATTTGTGAACAAAA
TATACTCCCTTACAATACAAAGTCCTTTATGAACGATTCCAGTGTTCGAG
TTCGGCTACCAAGCGGACCTAGCTGTAACACCCAAATTTGTCTAATCTAT
CCCAGTTGGCACCAACGTTGTTTCAACGTTTATGTTCATAACGTCTATAA
AACGTTAGGTGAACGTTGAAAAAACGTTGTGTTCCATCTGAGAAAGCTCA
TCTTGAAGTGGGGGTGTACAATATTTCCGAATTGCGGAAATCGACCCTTT
TTTCTTCGGAATTTCGGAAATCGAGCAAAATTCCTTCGATATTTCGGAAT
TCCGAAATTGTTTCAGTATTGGAAATCCATTTAATTTGGCTTCGAAATTT
TGGTATTATAAAGTTTTTATCTCCCTTTTTCGAAATTCATACATAAAAAA
TCAAATTTGATAAAAAATTAGTCAAACGAGGAAAAATACCCAAAAAATCG
GTATCGGAACTGCAAGTATTTTTTTTACGGAATTTCGAAAATTTTGGCAA
AATTATTCTGTATTTTGGAAATCGTAAACCCGTACGCCCACCACCTTGAA
TTGTATATTTATGGTTATTTCTATGTTTATTTTATTTTTTTAAACACATT
TTGCTCCCGTCTCCTATTTAGATAGGTGTGTTTACGCAACTTTCTTCTTC
TATTTTAGTTGCACTCTGATGCTGTTTGGTTTAAGCATGGCTTACATTGA
AGAAGGTAATTTTTTCTTCGTAGGATACGTCCACAGGTTAGAAATCTTTC
GATATTTTGCTTTTACTTTACGCTTATCGTTCATTTTCTCTTTTCAGTGC
ATTTTATAACAAATCATTTTTTGATCGAATATCTTTCCCCGTACATTTTC
ACAGTCGATTTCTGTCTACTACAAAGAAAATTATTTATTGAGAATCTTCC
AAAGTAAAATAACAGCAGTGCTTTCCCTGACCCAACCTTTGATTACTATT
TTGACGAAATTCCTTTCCACTTTGAGATTTCTTTGAATTTCTAAAAATTT
TATTTTAAATCATTATTTTATATATTCGTCTATTTATAAGTTTAGGATGT
TTGATGGTTTTGTAGTTTTTGAAAAGTCAAGTCTAATCAACAGTGACGAC
CCAAAGGGTGGTAAATGTCTCAAACATAAACAGACAGTGCTCTCGAAAAT
AAAGTTATTTTTATATAAAGTAAGTTTCTTGAATCTTCAAGAAAATAACG
AGAAATGAGAGATAAATGAATAAAGATTAGCTGCAGTGAAAAATCGTGCC
CAGTGAGAAAAATACCGAAAAATTCCATCCCTATTGGAAACCTTACTAGA
AAAGAGACCATGATTTTGCAAATCCTCCTTGGTGTTTTAATTTGAAAATG
ATACAATCTTAAATACTACTTGCGACATCTAAATTTCTTTGATGTTATGG
TTTTATGCGTGTTAAAACGTCCCAGGGTGACCATGAAAATCTTAAAATTT
CACACGGGTTTGATTTACAGGTCTCAAAATCTCATCAGAGCCGATGTGAC
CGGATGACTGATACAGGAGTGTGTTAAAGGTTAAAATATTTTCCTCGGGT
CAGGATAAAATTCATATTGAAATCCTTATGGGAAAATAAATTCTATTGTT
TCAAGGTTAAAAAGTCATTGAATTTCGAGCGGGATGAAATCAAAGTCGTT
TTCCAAGTTGGAATGAAATTTAAGAGTATTTTCCCATCGGGAACGAAATT
TTGGCCAAATTTTCCAGTGGGGCTTGGATCCCAACGGGTTTGACACAGTA
GTGCAGACAGGGTTTTGCTTAGAAGAAGCTTTATATTTAGCTAATTCTTA
TTTGATTATTCACTTACTGATACAGAACTCCTTATCGCTTTATATTTCAG
GCAAAGAATATTTGTTATTTATCTCGTTCGTTTTTCTTTCCATCTCATCC
TCCTTGTTAATGCTATGTCCATATCAGGTTAGTATTTTACAAAACTACAA
CATGATGTTTCATTGGCCGAGAGGTAATAACATATATAAAAGTAATTCAG
GAGAAAGAAGATAACCCTGATTGACTAGTCATTGTGCAGGGCAGTGAAAA
TAAATGCTAAAAGTTTCATTTTACGTCATAAAACAGTATCAAGAAAATCA
AGAGAAATATTATCCCGTGTCTTATGTTTTACGTTTTACAGTTTGGATTA
TGGAATGATTCGAATTATTGTAAGTACAATGAGAGTTTCCCTATGACGGG
AACACAGTGTTATTTGTAGTATAATGAGTCTTTGAGGAAGTTTATTCGAC
TTGTTAGACATCCAGAGAAATGGGGGAGATCAGTCATCGAGGTATTAACT
GATGCCTTTGTTTTGATTTTAGGTGTCGAATATTTTGTTCGTAAAGAATA
GAGCACTTTCACTTTCGTTATTGAGTGGATGTGTGGACGGCTCGACGGTC
ATTTTCATCATTTTTCTGGTGAGTCTCTTTATTCAATTAATCAACAAAAA
AATATCTAGCCCAACAGTCAGTTATTTTCTAGATGATTAGTAGAGAAAGG
AACAGGGCTTTTGCCTAAAAAGACATAATTTTGGCAATAATCTTTCCAAT
TGAATAAGAGATTCCAAAATGGACACGTGTTTTTTCGAACGTTTTTTAAG
GAAGTCGGGATGTTTTCGGAAAAACAAGGAATTGATATTGGGAAATATTG
GGAAATACACGCATTCAAATGAAATGCGAGCCCTGTAAACTTGGAACCTC
AATAATTACATCGTTTTTTTTCTGCTGTATCTATTTTGTTCCAATACAGT
TGTCTTTTATCAGTCACTTCCTCCCATAGAAAATGATGGATGCATTGGAT
GCAAAAATGCTCCATTTACCTAAACCTTAAAGTTACTTTGTTGAATGATT
CTTGAAAATATTGGATATATTTTATTTTGGTGTTATGGACTATTGTATTG
TATGGTATGTTTTTGGTTTTATAAGTTGCATTCGTTGAGGTAAGCATGCA
ACGCGAGGGGTAGTTTACTGATGAGCACTCATGTGTCTATCTTATAGATA
TAAATGGGGGTCGGGACTCAGAGTTTGTAAAACAGGCTTTAGGAAAAGGG
CGAAGGGTTTTATTATTTGGTTTTCATTTTTTGTTCAAGGGATTTGATAA
GATAGACACAGAAGTGTTTCAAAAACAACAAAAACGAAAAAACAAACATT
TTCGGAACATTTGGCAAATGAAAAGTAACATTACCCCTCTCACACAATTT
GTTTTGGACTTGGAGCTGGATGGAATTGAAATAAATGGGCTTGAACTGGA
AAGCCTACACACCAAGAATCAAAAGATTTTAAGAGCTTTACAAAAAAGTT
TTTCAGACGTCAGACGTCTATGATTAGCAAATCTTAAAAACCGATGTCGG
CTATTATTTATCCGACATGAGCCTTTTGTTGGTAAGTATAAAAAGCTAAT
AAAAAATGACCACGACATTATGCATAGTGTGAAGGTCACTAAGCTAACCC
ACGTTGTCACAAAAGACCATGGTCCCACTGGGAGAAGAATACTAAATTAC
AAGTAGGAAGGGGTAAATAGATCCTTTGGCTAAGGGGATTCTCATCTTAA
ACCATGGTCTTATCTCCGCCATTTTTTTAATCATTGGATGACTTTTACCT
TACTTTTTTATCTTTTTAACAGGAAATTTATCAGAAGCATATCACGTTTT
CAAGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTGATGATT
GCAACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGA
TGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATA
CAGATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCT
CAAGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTACCATGA
AGCAATTCACAAGTAAGCTAGCTAAAACTTTATATCAAATCAAATTTGTA
TGACTCAAAAACTGACGTAACAAGTAAAACCAGTTGACTCCAAAAATGTG
ACGGGATTTCCCGAAACCACTTAAAGCCGGTCTCCACTTGCACGCACTGC
GATCGCACTTTTTGGCTTCCATCCATTTTTCTTGGAAAAAAAATACTTCA
TAAAAATATAGCACGCGCTCGAAAAATTAACCGTCACGTCAGATTGCACC
AATGGAGTTGCTACATTTTTCTTTTGACCAATAGCGTGGAAGCTTTGCTC
GAAAAAGTGCGATCGCAGCGCGCGCAAGTGGAGACCGGCCTTTATACCAA
TCGGAAGCTCTCAAAATCGATATAGAGGACTTTTAAGTGAATATAGTCGA
CTTCCCAATCTCGAGAAAATTTAAGTCAGTTTTGACGTCATTTCCATTCG
ATTTACTCGAGTTACGCTCTAGCTGGCAGTAATGTTTTTTGACAGATTTA
ATTAGTCACCTATATCTTCTTTGTTTAATAAGCATTGTACTAACATCTTC
TCTTCATTTGGTATAAAACACTTCAACTATTTTTCTTCACTTTTCTTCAG
ATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACATTGTTAGCCA
GTCTATCTGAAAATCTGGCTATACAGTTTTCCAATAGAAGTTACGATGCA
AACGATCACAAGATACAGTATTTACCGTAAGTATAGACCTTTTCATAAAT
TACGTCACGAATATCACTTGCCTCGTTTTGAAATCATGACCATGGTGATT
AACTCCCAGCGGATTTTATTAAAACTACCTCCTATTCATAAAAGAATCGT
TTAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGC
AAGTGATGTTCATGACGTAATTTATGAAAAGGTCTATTCGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAATCGTTTAATGTC
TCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGCAAGTGATG
TTCATGACGTAATTTATGAAAAGGTCTATTCGGGATAATTCTTATCAAGT
GCCGGATCTAAAGAGAGGTTCAAAATTTATAGCGGTGAGTGCTTTTGTAA
GGGCTATAATCCTTATCCCTAATAAGGAAAAAGTCTTTGTGATAGACTTT
GAACCCCCTCAAATCTGCCACTGTCATCAGTAGAACTAACCCACGATCCT
AGTTTAACGTTCACATAACGTCAAGGACGCAATCTATGGAACTGTTTTCA
CTTTCCGTCGGCTGTAAATCTTACTGAAGAAACCTGTCAATCAGATTGAA
ATGGCTTATTGGTCCAAGTTGCGTTATTTCAGAAATGTCACCCAGATTAG
GGTCTTTTTAAGTATGATAGATTTTGCCTAATTATGGTTTTTTTATTGAT
TATTTGACATATTTCCTACTAGGAGCCGACCGTACGGTACGATTATGGAA
GGGTCTGTTGGCTATCAACAAGATTCTTATTCTGCGTCATCACACCTTGT
ATTCAACATAAAAAACAATAAGGAGGACGAAAAGACGCTCCTGTTACCAA
TTCAACCTACCAGGGAAGAGCACCTGACCCCCTACTCAGGTAAAAGCTGT
TTTTCTTTCAGCGTTTATCTTAAATACACGTTTTTTTTTATAAGAACAAA
CTATATAAGAACATAAGGCTTCGATGGCCAAATTCTTAAGAACAAGTCAA
GAACATTTTAAGCTTTCGTGGGCTCTAGAACACCCAATTTTTTTGGAAAA
TGGTCAAAAATACTAAAAAAATAGCGAAAATAAGAACATGTTTAGAACAT
TTTTAGGCCTGAAAGTAAAAAGTTTAAGAACATCCGAAGGTTTCAAAAAC
TTTTGATGTTCTTATGAAAAAAAACGTGTACCATTAGTTTGGCTGACGTT
TTAGTAGCTTAACTCAAGCTAATCTACACTAAATGAAGATTTTTATTTGG
ATAGAAATCTTTTTTCAACTATCTTTTTAGGTATTTACTTGAATTTGTTT
CATTGATATGATTCTCAAGTTTCGGCTAGATGAATTGTGAATTTTATGGC
TGACTTTTTTCATTTTTCTGTATTTGAAGGACATAAACTACGGCAATACA
TCTTTTCGAAGTTGATGATCTTTGGCACATACACAGCTAGTGTGATGATG
TTCAAGATTGTTTATTTCATCGGAAATTTGGACAAATATCTTAACAAATT
GACCGATACTGAGACAGGTAACCTTTGTTTCACTAATTTATAGGATACAT
GTTTTTCCTTTTATAAACTCAATCGGCTTGTTCCTAATTTTGTCAGCTTG
TTAAAGTATATACACTTTGATTTAATTATTTCCATCTTTTAGAATGCTAA
TCTACTACTGTAATATCGCTTAAAAAAACAATTTCTTCGAGAGACTTTTT
TGTCTAACACAGTCCATACCCTGACCCTACTGCATAAAAAGACGTATGAC
TACAAAAATATTACCTTCGCTTGAGCCCCTTAGCAATAAATAAAATTACT
AGAGTTTGTAAGCTTCGTCGCGAACCAACATTATCCAATAAGACTCGTAA
CTCACAACCATAGGGCATAGCATTGGCGGACAATAGCTTTTACCCCCCGG
ACAAGCATCTGCTGACCCCCCGGACACCCCAAATTACCCCCGGACAAGGC
AAATTTTGATGATTTTTTGCTACCCCCCGGACAAAATATCCTCCACCCCC
CATGTACAATTTTTTTCTGGAAGAGCCCAATAGTAATTCATGTGTTTTCC
CACTCTCTCATAGCAANCATAGCATTGGCGGACAATAGTAATTCATATGT
TTTCCCACTCTCTCATAGCAACTTTGTATATCAAATATTTTGGATATGTT
CAGTTCGGTGGAATTATCGCTGCACCGATCTGCAGTATGTTATTTCGTGA
GAATGTGGGAACCGAAAGATTATCTGCTCATCAAGATTTCGTTAAAAAAG
TCAAAATTTTAATCCTTCCTGGTTTTCTTCTCATCTTGTTCATCGTGCTT
ATCGATGTCTTACAACTCGTTCAAAACATTTATCTATCGGTAAGCTGTTA
CAACTTTTTTATAAAAACTATTTGGGGGGAGGGGTACTACCTTGCCGACC
GACGGTGTGTCCGCTGAAGTTAAAAAAATGGACCCTACATTGGACTCGTT
TTTTTTTACATTTTGCCAAAGTTTTCGAAAAAGTGCCCTTGAATGGGATT
AAAATTTCGACCATACTTGGGACTCATTGAGGTGAAAAAGGTATCCTGAC
CAGTACATCCCCGTACCCCTTTTTGCCCAAGTACCCCCGGGGAACTATTT
CTTATAATTCAGTCAAAACTTATAAACAAATCATAGACAATTGAACCCTT
CATAACTTCATAGACCTTAAGTGTGAAGAAACTAAGCATAAGTCACTTTT
TCGAAAGAGATCCTTGACATTAGGGGTATGTTTTCCATTTAAAAACTTCA
ATTTTCCTGTTATCGATAACTATTCCTAGATTCTTCAAGTGAAATAAACT
TCTTTTTTTCAGGTTCCAATTTTCATTCTGTTTTTGTTTGGGAACAGTTT
GGTGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTAAGTAGTTCCCC
TTTGAATTACAGTGGAGTTTTCATAACTCAAACTTTTATAACTCGAAAGA
CTCCTTAACTCGAACAATGCCTTATAAACTAAGCTCCGTAACTCGAACTT
CCTTAACTTGACAAAAATTGTATTCCTTGTGCGTATTCGAGTTACGAAAA
CTTCACTAGGTTTCAATCCTGTTAGAAGTTGCCTCGGAAGTAAACCCACC
TAAAACACATCCCAAACCAGCTGTCACTCCCTCCAGGACCTAATAAACTA
GAGAAATCAGTCTTTAAAACCACTGTAAAACACCAAAGACCCTTAAAAAG
GTACATTGATTGACGGTTATTATATTGTAACGCTTTTTTCTTCGTATTTC
AGGTTTCCGGCCAAGTACTACTGCACCTTGTATGGCATCGCAACGGGAGT
ATCTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATT
CTCTTTTCCACGGAGAACAATTCTATGTAAGTCTTCAAAACCAAAAACTC
GAACCCAGTCCCTTAGTTTTCTTTTCATGACTCCAAAAGTTTCATATCAA
GTCCATCAATAAAATCAAAAAAAAGTTTTACCCTAATAATCGTCTACTAT
ATTGAAATATTAACAAAGGGCAATTCTTTTTGAGGAAAATCTCAACCCTT
AGTTTAGAATATAAATGCTAAGGTGAATGTATGTAACTTTGGTAAAATCC
AATGGGAGGATATTAAGGGAAGCATCCAGTATTAATTGATTTTGGCATAA
CAATGAAAACTTTATAATAATTACAGTTAACTCTCGCTAATTCGAACTCG
ATCCTCAACTCTAATTTATTCGAATTCAAGAGAGATTCGAATTATAGAGA
GTAAGTTTCTCCTTGACGGTAACTGACAAAAAGTTCGAATTATAGAAAGA
TTTCGAATATAGAAGTTCGAATTGGCGAGAGTCTATTGTAGTTTTAAAAG
CATATATAATTTTTCTTCTCTATATAGACGAACCTTCTCATGTTGGGATT
ACTTATATCAACACTGGTGCTTCCATTCTACTTGGTGTATTTCTACAAAA
AATTGAAAATGGCGGAAATTGAAACTCAAGAAAAACCTTGACAAGTCTGA
TATGAATTTCAAGATGTATTTGTTAAGTTGTTAAAACTTGTGAAATTATT
TTTTGGCTTAAACTAGTTCCTGGTTATTTGATCAAAAAGTTTTGTGTATA
TGAAATGTGAGTATATTGAACTGTACTCATGATAGTTTAAAAAGATTTTG
GCGGATATTTTTATTCGCGAGTTTTAAGATTTTAACATTCAAAAGCTGAT
TTGACTTATTCCTGAGTTAATTATTTGTGACCTAATTACCTTTTACAGGA
GAAGTATGAAATCGATTGTTTCCCCGATTTTAATGTTTTCATTTATTTTC
GAAACCTACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033388XLOC_033388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052844-exon-scaffold_220-1575043694:189452..189889TCONS_00052844-exon-scaffold_220-1575043694:189452..189889Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:188535..188581TCONS_00052844-exon-scaffold_220-1575043694:188535..188581Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:186822..186917TCONS_00052844-exon-scaffold_220-1575043694:186822..186917Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:186336..186460TCONS_00052844-exon-scaffold_220-1575043694:186336..186460Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:185328..185617TCONS_00052844-exon-scaffold_220-1575043694:185328..185617Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:184614..184739TCONS_00052844-exon-scaffold_220-1575043694:184614..184739Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:181751..181917TCONS_00052844-exon-scaffold_220-1575043694:181751..181917Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:181123..181260TCONS_00052844-exon-scaffold_220-1575043694:181123..181260Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:180301..180521TCONS_00052844-exon-scaffold_220-1575043694:180301..180521Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:179754..179827TCONS_00052844-exon-scaffold_220-1575043694:179754..179827Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:179264..179387TCONS_00052844-exon-scaffold_220-1575043694:179264..179387Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1575043694:178327..178762TCONS_00052844-exon-scaffold_220-1575043694:178327..178762Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:189452..189889TCONS_00052844-exon-scaffold_220-1510915933:189452..189889Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:188535..188581TCONS_00052844-exon-scaffold_220-1510915933:188535..188581Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:186822..186917TCONS_00052844-exon-scaffold_220-1510915933:186822..186917Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:186336..186460TCONS_00052844-exon-scaffold_220-1510915933:186336..186460Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:185328..185617TCONS_00052844-exon-scaffold_220-1510915933:185328..185617Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:184614..184739TCONS_00052844-exon-scaffold_220-1510915933:184614..184739Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:181751..181917TCONS_00052844-exon-scaffold_220-1510915933:181751..181917Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:181123..181260TCONS_00052844-exon-scaffold_220-1510915933:181123..181260Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:180301..180521TCONS_00052844-exon-scaffold_220-1510915933:180301..180521Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:179754..179827TCONS_00052844-exon-scaffold_220-1510915933:179754..179827Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:179264..179387TCONS_00052844-exon-scaffold_220-1510915933:179264..179387Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1510915933:178327..178762TCONS_00052844-exon-scaffold_220-1510915933:178327..178762Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:189452..189889TCONS_00052844-exon-scaffold_220-1491911889:189452..189889Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:188535..188581TCONS_00052844-exon-scaffold_220-1491911889:188535..188581Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:186822..186917TCONS_00052844-exon-scaffold_220-1491911889:186822..186917Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:186336..186460TCONS_00052844-exon-scaffold_220-1491911889:186336..186460Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:185328..185617TCONS_00052844-exon-scaffold_220-1491911889:185328..185617Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:184614..184739TCONS_00052844-exon-scaffold_220-1491911889:184614..184739Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:181751..181917TCONS_00052844-exon-scaffold_220-1491911889:181751..181917Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:181123..181260TCONS_00052844-exon-scaffold_220-1491911889:181123..181260Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:180301..180521TCONS_00052844-exon-scaffold_220-1491911889:180301..180521Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:179754..179827TCONS_00052844-exon-scaffold_220-1491911889:179754..179827Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:179264..179387TCONS_00052844-exon-scaffold_220-1491911889:179264..179387Clytia hemisphaericaexon
TCONS_00052844-exon-scaffold_220-1491911889:178327..178762TCONS_00052844-exon-scaffold_220-1491911889:178327..178762Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:178327..189889 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0193776	0	0.0230795	0	5.82877	3.06241	1.59934	2.91175	1.76494e-07	2.8059	2.85058	7.56985	4.66034	7.04429	2.67998	10.0537	7.6221	4.11574	8.3647	6.28718	2.70367	3.26323	1.38423	3.11998	0.394195	0.274131	2.88255	2.35223
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052844 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top