TCONS_00052846 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052846
Unique NameTCONS_00052846
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052846 ID=TCONS_00052846|Name=TCONS_00052846|organism=Clytia hemisphaerica|type=transcript|length=3222bp
GAAACATGTTTTGTAAGAGTTGTAACAATCTAGATTTTCAAGTCTGGTTA
GTTTGTTTTTGCCAGAAATGTGACAAGCCCTATGTTTTCATTGTCATTAG
CATAGAAACAACAACCATATAGAACTTATACTCAGAGTATCTTAACACAT
TTCTTGTCAAGCAGCAAGCATTATAGACGTTCTATTTAGAGGTTgaagtt
tattatttttgttagACAACAATGGGTTTCGGTGAAATATCAGTGCATCA
ATGTCGACAGAAAAGCTATCTCTTCATCTTTACAATTGCTTCTTGTTTCC
AAGTCATAATATCATCGTGTATTTTATTTGGTTATTCGTCATTACTGGTC
ATTTTCAAAGACTTACGACTTTACAGAACCTCTTGTGTGGAGAACCTTCA
CGCACAAAACACAACAACTTTAATGACCTTACAACAACAAATACCAAACC
AATCATGTACGGCTAGGGATGAAGCTCTCAATTTGCCGTTTGCTGTTGgt
gttattttcttttcagtGGTCAAAATACCACTTGGAAGTATTATTGATTC
TTTTGGTGCAAAATCGTCACAATATATTGGATGTTGCACTCTGATGCTGT
TTGGTTTAAGCATGGCTTACATTGAAGAAGGCAAAGAATATTTGTTATTT
ATCTCGTTCGTTTTTCTTTCCATCTCATCCTCCTTGTTAATGCTATGTCC
ATATCAGgtGTCGAATATTTTGTTCGTAAAGAATagagcactttcacttt
cgttatTGAGTGGATGTGTGGACGGCTCGAcggtcattttcatcattttt
ctgAAAATGATGGATGCATTGGATGCAAAAATGCTCCATTTACCTAAACC
TTAAAGTTACTTTGTTGAATGATTCTTGAAAATATTGgatatattttatt
ttggtgTTATGGACTATTGTATTGTATGGTatgtttttggttttataaGT
TGCATTCGTTGAGGTAAGCATGCAACGCGAGGGGTAGTTTACTGATGAGC
ACTCATGTGTCTATCTTATAGATATAAATGGGGGTCGGGACTCAGAGTTT
GTAAAACAGGCTTTAGGAAAAGGGCGAAGGGTTTTATTATttggttttca
ttttttgttcaagGGATTTGATAAGATAGACACAGAAGtgtttcaaaaac
aacaaaaacgaaaaaacaaacattttcggAACATTTGGCAAATGAAAAGT
AACATTACCCCTCTCACACAATTTGTTTTGGACTTGGAGCTGGATGGAAT
TGAAATAAATGGGCTTGAACTGGAAAGCCTACACACCAAGaatcaaaaga
ttttaagagctttacaaaaaagtttttcagacGTCAGACGTCTATGATTA
GCAAATCTTAAAAACCGATGTCGGCTATTATTTATCCGACATGAGCCTTT
TGTTGGTAAGTATAAAAAGCTAATAAAAAATGACCACGACATTATGCATA
GTGTGAAGGTCACTAAGCTAACCCACGTTGTCACAAAAGACCATGGTCCC
ACTGGGAGAAGAATACTAAATTACAAGTAGGAAGGGGTAAATAGATCCTT
TGGCTAAGGGGATTCTCATCTTAAACCATGGTCTTATCTCCgccattttt
ttaatcattGGATGACTTTTACCttacttttttatctttttaacagGAAA
TTTATCAGAAGCATATCACGTTTTCAAGTATTTGTATATCGTATGCTGTT
GGCGCATCATGTATATTGATGATTGCAACAACATTTCTTTATCCAACAAA
GGAAGTTCTACAAGCGTTCATTGATGTTGAGACTGTTAACAACATTCGTC
CCCAGCTCTCTGATGATGAAGATACAGATGATGAAAACCTTGTTGATACA
GCATCTTCTCATGTCATGCGATCTCAAGATTTCGCTTCTAATTCTATTAT
GTCAAGTTATCAGATGTACCATGAAGCAATTCACAAATCGCTTGAACAGA
TAAAGGAAGCTGAGCGCCGTGAAACATTGTTAGCCAGTCTATCTGAAAAT
CTGGCTATACAGTTTTCCAATAGAAGTTACGATGCAAACGATCACAAGAT
ACAGTATTTACCGAGCCGACCGTACGGTACGATTATGGAAGGGTCTGTTG
GCTATCAACAAGATTCTTATTCTGCGTCATCACACCTTGTATTCAACATA
AAAAACAATAAGGAGGACGAAAAGACGCTCCTGTTACCAATTCAACCTAC
CAGGGAAGAGCACCTGACCCCCTACTCAGGACATAAACTACGGCAATACA
TCTTTTCGAAGTTGATGATCTTTGGCACATACACAGCTAGTGTGATGATG
TTCAAGATTGTTTATTTCATCGGAAATTTGGACAAATATCTTAACAAATT
GACCGATACTGAGACAGCAACTTTGTatatcaaatattttggatatgTTC
AGTTCGGTGGAATTATCGCTGCACCGATCTGCAGTATGTTATTTCGTGAG
AATGTGGGAACCGAAAGATTATCTGCTCATCAAGATTTcgttaaaaaagt
caaaattttaatCCTTCCTGGTTTTCTTCTCATCTTGTTCATCGTGCTTA
TCGATGTCTTACAACTCGTTCAAAACATTTATCTATCGgTTCCAATTTTC
ATTCTGTTTTTGTTTGGGAACAGTTTGGTGTGGTGTTTCACTTCATTGTA
CTTCGCATATCTGTTTCCGGCCAAGTACTACTGCACCTTGTATGGCATCG
CAACGGGAGTATCTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCT
CTTGAAAATTCTCTTTTCCACGGAGAACAATTCTATACGAACCTTCTCAT
GTTGGGATTACTTATATCAACACTGGTGCTTCCATTCTACTTGGTgtatt
tctacaaaaaattgaaaatggcgGAAATTGAAACTCAAGAAAAACCTTGA
CAAGTCTGATATGAATTTCAAGATGTATTTGTTAAGTTGTTAAAACttgt
gaaattattttttggcttaaacTAGTTCCTGGTtatttgatcaaaaagtt
ttgtGTATATGAAATGTGAGTATATTGAACTGTACTCATGATagtttaaa
aagattttggcGGATATTTTTATTCGCGAGTTTTAAGATTTTAACATTCA
AAAGCTGATTTGACTTATTCCTGAGTTAATTATTTGTGACCTAATTACCT
TTTACAGGAGAAGTATGAAATCGATTGTTTCCCcgattttaatgttttca
tttattttcgaAACCTACGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_220:178327..190034-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052846 ID=TCONS_00052846|Name=TCONS_00052846|organism=Clytia hemisphaerica|type=transcript|length=11708bp|location=Sequence derived from alignment at scaffold_220:178327..190034- (Clytia hemisphaerica)
GAAACATGTTTTGTAAGAGTTGTAACAATCTAGATTTTCAAGTCTGGTTA
GTTTGTTTTTGCCAGAAATGTGACAAGCCCTATGTTTTCATTGTCATTAG
CATAGAAACAACAACCATATAGAACTTATACTCAGAGTATCTTAACACAT
TTCTTGTCAAGCAGCAAGCATTATAGACGTTCTATTTAGAGGTTGAAGTT
TATTATTTTTGTTAGACAACAATGGGTTTCGGTGAAATATCAGTGCATCA
ATGTCGACAGAAAAGCTATCTCTTCATCTTTACAATTGCTTCTTGTTTCC
AAGTCATAATATCATCGTGTATTTTATTTGGTTATTCGTCATTACTGGTC
ATTTTCAAAGACTTACGACTTTACAGAACCTCTTGTGTGGAGAACCTTCA
CGCACAAAACACAACAACTTTAATGACCTTACAACAACAAATACCAAACC
AATCATGTACGGCTAGGGATGAAGCTCTCAATTTGCCGTTTGCTGTTGGT
GTTATTTTCTTTTCAGTGGTCAAAATACCACTTGGAAGTATTATTGATTC
TTTTGGTGCAAAATCGTCACAATATATTGGATGGTATGTACCCCAACCTG
AAACAAATTGTGTTTTTATTGTCTTTGACATTTTATTCCTGTTGAGATGG
TTCCACATGAGTCTTTTAAGAAAGCGGCGAAATTCTGGTAAAAAACTTCT
TATTACCCTCCCTCGTCAACCTCGTTCTCTTTTAACTATCCCAGCTCATA
CGCTCACTTTTACCACGGTATATCGTTTCAAATTTGTGAACAAAATATAC
TCCCTTACAATACAAAGTCCTTTATGAACGATTCCAGTGTTCGAGTTCGG
CTACCAAGCGGACCTAGCTGTAACACCCAAATTTGTCTAATCTATCCCAG
TTGGCACCAACGTTGTTTCAACGTTTATGTTCATAACGTCTATAAAACGT
TAGGTGAACGTTGAAAAAACGTTGTGTTCCATCTGAGAAAGCTCATCTTG
AAGTGGGGGTGTACAATATTTCCGAATTGCGGAAATCGACCCTTTTTTCT
TCGGAATTTCGGAAATCGAGCAAAATTCCTTCGATATTTCGGAATTCCGA
AATTGTTTCAGTATTGGAAATCCATTTAATTTGGCTTCGAAATTTTGGTA
TTATAAAGTTTTTATCTCCCTTTTTCGAAATTCATACATAAAAAATCAAA
TTTGATAAAAAATTAGTCAAACGAGGAAAAATACCCAAAAAATCGGTATC
GGAACTGCAAGTATTTTTTTTACGGAATTTCGAAAATTTTGGCAAAATTA
TTCTGTATTTTGGAAATCGTAAACCCGTACGCCCACCACCTTGAATTGTA
TATTTATGGTTATTTCTATGTTTATTTTATTTTTTTAAACACATTTTGCT
CCCGTCTCCTATTTAGATAGGTGTGTTTACGCAACTTTCTTCTTCTATTT
TAGTTGCACTCTGATGCTGTTTGGTTTAAGCATGGCTTACATTGAAGAAG
GTAATTTTTTCTTCGTAGGATACGTCCACAGGTTAGAAATCTTTCGATAT
TTTGCTTTTACTTTACGCTTATCGTTCATTTTCTCTTTTCAGTGCATTTT
ATAACAAATCATTTTTTGATCGAATATCTTTCCCCGTACATTTTCACAGT
CGATTTCTGTCTACTACAAAGAAAATTATTTATTGAGAATCTTCCAAAGT
AAAATAACAGCAGTGCTTTCCCTGACCCAACCTTTGATTACTATTTTGAC
GAAATTCCTTTCCACTTTGAGATTTCTTTGAATTTCTAAAAATTTTATTT
TAAATCATTATTTTATATATTCGTCTATTTATAAGTTTAGGATGTTTGAT
GGTTTTGTAGTTTTTGAAAAGTCAAGTCTAATCAACAGTGACGACCCAAA
GGGTGGTAAATGTCTCAAACATAAACAGACAGTGCTCTCGAAAATAAAGT
TATTTTTATATAAAGTAAGTTTCTTGAATCTTCAAGAAAATAACGAGAAA
TGAGAGATAAATGAATAAAGATTAGCTGCAGTGAAAAATCGTGCCCAGTG
AGAAAAATACCGAAAAATTCCATCCCTATTGGAAACCTTACTAGAAAAGA
GACCATGATTTTGCAAATCCTCCTTGGTGTTTTAATTTGAAAATGATACA
ATCTTAAATACTACTTGCGACATCTAAATTTCTTTGATGTTATGGTTTTA
TGCGTGTTAAAACGTCCCAGGGTGACCATGAAAATCTTAAAATTTCACAC
GGGTTTGATTTACAGGTCTCAAAATCTCATCAGAGCCGATGTGACCGGAT
GACTGATACAGGAGTGTGTTAAAGGTTAAAATATTTTCCTCGGGTCAGGA
TAAAATTCATATTGAAATCCTTATGGGAAAATAAATTCTATTGTTTCAAG
GTTAAAAAGTCATTGAATTTCGAGCGGGATGAAATCAAAGTCGTTTTCCA
AGTTGGAATGAAATTTAAGAGTATTTTCCCATCGGGAACGAAATTTTGGC
CAAATTTTCCAGTGGGGCTTGGATCCCAACGGGTTTGACACAGTAGTGCA
GACAGGGTTTTGCTTAGAAGAAGCTTTATATTTAGCTAATTCTTATTTGA
TTATTCACTTACTGATACAGAACTCCTTATCGCTTTATATTTCAGGCAAA
GAATATTTGTTATTTATCTCGTTCGTTTTTCTTTCCATCTCATCCTCCTT
GTTAATGCTATGTCCATATCAGGTTAGTATTTTACAAAACTACAACATGA
TGTTTCATTGGCCGAGAGGTAATAACATATATAAAAGTAATTCAGGAGAA
AGAAGATAACCCTGATTGACTAGTCATTGTGCAGGGCAGTGAAAATAAAT
GCTAAAAGTTTCATTTTACGTCATAAAACAGTATCAAGAAAATCAAGAGA
AATATTATCCCGTGTCTTATGTTTTACGTTTTACAGTTTGGATTATGGAA
TGATTCGAATTATTGTAAGTACAATGAGAGTTTCCCTATGACGGGAACAC
AGTGTTATTTGTAGTATAATGAGTCTTTGAGGAAGTTTATTCGACTTGTT
AGACATCCAGAGAAATGGGGGAGATCAGTCATCGAGGTATTAACTGATGC
CTTTGTTTTGATTTTAGGTGTCGAATATTTTGTTCGTAAAGAATAGAGCA
CTTTCACTTTCGTTATTGAGTGGATGTGTGGACGGCTCGACGGTCATTTT
CATCATTTTTCTGGTGAGTCTCTTTATTCAATTAATCAACAAAAAAATAT
CTAGCCCAACAGTCAGTTATTTTCTAGATGATTAGTAGAGAAAGGAACAG
GGCTTTTGCCTAAAAAGACATAATTTTGGCAATAATCTTTCCAATTGAAT
AAGAGATTCCAAAATGGACACGTGTTTTTTCGAACGTTTTTTAAGGAAGT
CGGGATGTTTTCGGAAAAACAAGGAATTGATATTGGGAAATATTGGGAAA
TACACGCATTCAAATGAAATGCGAGCCCTGTAAACTTGGAACCTCAATAA
TTACATCGTTTTTTTTCTGCTGTATCTATTTTGTTCCAATACAGTTGTCT
TTTATCAGTCACTTCCTCCCATAGAAAATGATGGATGCATTGGATGCAAA
AATGCTCCATTTACCTAAACCTTAAAGTTACTTTGTTGAATGATTCTTGA
AAATATTGGATATATTTTATTTTGGTGTTATGGACTATTGTATTGTATGG
TATGTTTTTGGTTTTATAAGTTGCATTCGTTGAGGTAAGCATGCAACGCG
AGGGGTAGTTTACTGATGAGCACTCATGTGTCTATCTTATAGATATAAAT
GGGGGTCGGGACTCAGAGTTTGTAAAACAGGCTTTAGGAAAAGGGCGAAG
GGTTTTATTATTTGGTTTTCATTTTTTGTTCAAGGGATTTGATAAGATAG
ACACAGAAGTGTTTCAAAAACAACAAAAACGAAAAAACAAACATTTTCGG
AACATTTGGCAAATGAAAAGTAACATTACCCCTCTCACACAATTTGTTTT
GGACTTGGAGCTGGATGGAATTGAAATAAATGGGCTTGAACTGGAAAGCC
TACACACCAAGAATCAAAAGATTTTAAGAGCTTTACAAAAAAGTTTTTCA
GACGTCAGACGTCTATGATTAGCAAATCTTAAAAACCGATGTCGGCTATT
ATTTATCCGACATGAGCCTTTTGTTGGTAAGTATAAAAAGCTAATAAAAA
ATGACCACGACATTATGCATAGTGTGAAGGTCACTAAGCTAACCCACGTT
GTCACAAAAGACCATGGTCCCACTGGGAGAAGAATACTAAATTACAAGTA
GGAAGGGGTAAATAGATCCTTTGGCTAAGGGGATTCTCATCTTAAACCAT
GGTCTTATCTCCGCCATTTTTTTAATCATTGGATGACTTTTACCTTACTT
TTTTATCTTTTTAACAGGAAATTTATCAGAAGCATATCACGTTTTCAAGT
ATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTGATGATTGCAAC
AACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGATGTTG
AGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATACAGAT
GATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCTCAAGA
TTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTACCATGAAGCAA
TTCACAAGTAAGCTAGCTAAAACTTTATATCAAATCAAATTTGTATGACT
CAAAAACTGACGTAACAAGTAAAACCAGTTGACTCCAAAAATGTGACGGG
ATTTCCCGAAACCACTTAAAGCCGGTCTCCACTTGCACGCACTGCGATCG
CACTTTTTGGCTTCCATCCATTTTTCTTGGAAAAAAAATACTTCATAAAA
ATATAGCACGCGCTCGAAAAATTAACCGTCACGTCAGATTGCACCAATGG
AGTTGCTACATTTTTCTTTTGACCAATAGCGTGGAAGCTTTGCTCGAAAA
AGTGCGATCGCAGCGCGCGCAAGTGGAGACCGGCCTTTATACCAATCGGA
AGCTCTCAAAATCGATATAGAGGACTTTTAAGTGAATATAGTCGACTTCC
CAATCTCGAGAAAATTTAAGTCAGTTTTGACGTCATTTCCATTCGATTTA
CTCGAGTTACGCTCTAGCTGGCAGTAATGTTTTTTGACAGATTTAATTAG
TCACCTATATCTTCTTTGTTTAATAAGCATTGTACTAACATCTTCTCTTC
ATTTGGTATAAAACACTTCAACTATTTTTCTTCACTTTTCTTCAGATCGC
TTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACATTGTTAGCCAGTCTA
TCTGAAAATCTGGCTATACAGTTTTCCAATAGAAGTTACGATGCAAACGA
TCACAAGATACAGTATTTACCGTAAGTATAGACCTTTTCATAAATTACGT
CACGAATATCACTTGCCTCGTTTTGAAATCATGACCATGGTGATTAACTC
CCAGCGGATTTTATTAAAACTACCTCCTATTCATAAAAGAATCGTTTAAT
GTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGCAAGTG
ATGTTCATGACGTAATTTATGAAAAGGTCTATTCGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAATCGTTTAATGTCTCAAG
GGACATAATCACCATGGTAATTGTTTGAATACGAGGCAAGTGATGTTCAT
GACGTAATTTATGAAAAGGTCTATTCGGGATAATTCTTATCAAGTGCCGG
ATCTAAAGAGAGGTTCAAAATTTATAGCGGTGAGTGCTTTTGTAAGGGCT
ATAATCCTTATCCCTAATAAGGAAAAAGTCTTTGTGATAGACTTTGAACC
CCCTCAAATCTGCCACTGTCATCAGTAGAACTAACCCACGATCCTAGTTT
AACGTTCACATAACGTCAAGGACGCAATCTATGGAACTGTTTTCACTTTC
CGTCGGCTGTAAATCTTACTGAAGAAACCTGTCAATCAGATTGAAATGGC
TTATTGGTCCAAGTTGCGTTATTTCAGAAATGTCACCCAGATTAGGGTCT
TTTTAAGTATGATAGATTTTGCCTAATTATGGTTTTTTTATTGATTATTT
GACATATTTCCTACTAGGAGCCGACCGTACGGTACGATTATGGAAGGGTC
TGTTGGCTATCAACAAGATTCTTATTCTGCGTCATCACACCTTGTATTCA
ACATAAAAAACAATAAGGAGGACGAAAAGACGCTCCTGTTACCAATTCAA
CCTACCAGGGAAGAGCACCTGACCCCCTACTCAGGTAAAAGCTGTTTTTC
TTTCAGCGTTTATCTTAAATACACGTTTTTTTTTATAAGAACAAACTATA
TAAGAACATAAGGCTTCGATGGCCAAATTCTTAAGAACAAGTCAAGAACA
TTTTAAGCTTTCGTGGGCTCTAGAACACCCAATTTTTTTGGAAAATGGTC
AAAAATACTAAAAAAATAGCGAAAATAAGAACATGTTTAGAACATTTTTA
GGCCTGAAAGTAAAAAGTTTAAGAACATCCGAAGGTTTCAAAAACTTTTG
ATGTTCTTATGAAAAAAAACGTGTACCATTAGTTTGGCTGACGTTTTAGT
AGCTTAACTCAAGCTAATCTACACTAAATGAAGATTTTTATTTGGATAGA
AATCTTTTTTCAACTATCTTTTTAGGTATTTACTTGAATTTGTTTCATTG
ATATGATTCTCAAGTTTCGGCTAGATGAATTGTGAATTTTATGGCTGACT
TTTTTCATTTTTCTGTATTTGAAGGACATAAACTACGGCAATACATCTTT
TCGAAGTTGATGATCTTTGGCACATACACAGCTAGTGTGATGATGTTCAA
GATTGTTTATTTCATCGGAAATTTGGACAAATATCTTAACAAATTGACCG
ATACTGAGACAGGTAACCTTTGTTTCACTAATTTATAGGATACATGTTTT
TCCTTTTATAAACTCAATCGGCTTGTTCCTAATTTTGTCAGCTTGTTAAA
GTATATACACTTTGATTTAATTATTTCCATCTTTTAGAATGCTAATCTAC
TACTGTAATATCGCTTAAAAAAACAATTTCTTCGAGAGACTTTTTTGTCT
AACACAGTCCATACCCTGACCCTACTGCATAAAAAGACGTATGACTACAA
AAATATTACCTTCGCTTGAGCCCCTTAGCAATAAATAAAATTACTAGAGT
TTGTAAGCTTCGTCGCGAACCAACATTATCCAATAAGACTCGTAACTCAC
AACCATAGGGCATAGCATTGGCGGACAATAGCTTTTACCCCCCGGACAAG
CATCTGCTGACCCCCCGGACACCCCAAATTACCCCCGGACAAGGCAAATT
TTGATGATTTTTTGCTACCCCCCGGACAAAATATCCTCCACCCCCCATGT
ACAATTTTTTTCTGGAAGAGCCCAATAGTAATTCATGTGTTTTCCCACTC
TCTCATAGCAANCATAGCATTGGCGGACAATAGTAATTCATATGTTTTCC
CACTCTCTCATAGCAACTTTGTATATCAAATATTTTGGATATGTTCAGTT
CGGTGGAATTATCGCTGCACCGATCTGCAGTATGTTATTTCGTGAGAATG
TGGGAACCGAAAGATTATCTGCTCATCAAGATTTCGTTAAAAAAGTCAAA
ATTTTAATCCTTCCTGGTTTTCTTCTCATCTTGTTCATCGTGCTTATCGA
TGTCTTACAACTCGTTCAAAACATTTATCTATCGGTAAGCTGTTACAACT
TTTTTATAAAAACTATTTGGGGGGAGGGGTACTACCTTGCCGACCGACGG
TGTGTCCGCTGAAGTTAAAAAAATGGACCCTACATTGGACTCGTTTTTTT
TTACATTTTGCCAAAGTTTTCGAAAAAGTGCCCTTGAATGGGATTAAAAT
TTCGACCATACTTGGGACTCATTGAGGTGAAAAAGGTATCCTGACCAGTA
CATCCCCGTACCCCTTTTTGCCCAAGTACCCCCGGGGAACTATTTCTTAT
AATTCAGTCAAAACTTATAAACAAATCATAGACAATTGAACCCTTCATAA
CTTCATAGACCTTAAGTGTGAAGAAACTAAGCATAAGTCACTTTTTCGAA
AGAGATCCTTGACATTAGGGGTATGTTTTCCATTTAAAAACTTCAATTTT
CCTGTTATCGATAACTATTCCTAGATTCTTCAAGTGAAATAAACTTCTTT
TTTTCAGGTTCCAATTTTCATTCTGTTTTTGTTTGGGAACAGTTTGGTGT
GGTGTTTCACTTCATTGTACTTCGCATATCTGTAAGTAGTTCCCCTTTGA
ATTACAGTGGAGTTTTCATAACTCAAACTTTTATAACTCGAAAGACTCCT
TAACTCGAACAATGCCTTATAAACTAAGCTCCGTAACTCGAACTTCCTTA
ACTTGACAAAAATTGTATTCCTTGTGCGTATTCGAGTTACGAAAACTTCA
CTAGGTTTCAATCCTGTTAGAAGTTGCCTCGGAAGTAAACCCACCTAAAA
CACATCCCAAACCAGCTGTCACTCCCTCCAGGACCTAATAAACTAGAGAA
ATCAGTCTTTAAAACCACTGTAAAACACCAAAGACCCTTAAAAAGGTACA
TTGATTGACGGTTATTATATTGTAACGCTTTTTTCTTCGTATTTCAGGTT
TCCGGCCAAGTACTACTGCACCTTGTATGGCATCGCAACGGGAGTATCTG
GAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATTCTCTT
TTCCACGGAGAACAATTCTATGTAAGTCTTCAAAACCAAAAACTCGAACC
CAGTCCCTTAGTTTTCTTTTCATGACTCCAAAAGTTTCATATCAAGTCCA
TCAATAAAATCAAAAAAAAGTTTTACCCTAATAATCGTCTACTATATTGA
AATATTAACAAAGGGCAATTCTTTTTGAGGAAAATCTCAACCCTTAGTTT
AGAATATAAATGCTAAGGTGAATGTATGTAACTTTGGTAAAATCCAATGG
GAGGATATTAAGGGAAGCATCCAGTATTAATTGATTTTGGCATAACAATG
AAAACTTTATAATAATTACAGTTAACTCTCGCTAATTCGAACTCGATCCT
CAACTCTAATTTATTCGAATTCAAGAGAGATTCGAATTATAGAGAGTAAG
TTTCTCCTTGACGGTAACTGACAAAAAGTTCGAATTATAGAAAGATTTCG
AATATAGAAGTTCGAATTGGCGAGAGTCTATTGTAGTTTTAAAAGCATAT
ATAATTTTTCTTCTCTATATAGACGAACCTTCTCATGTTGGGATTACTTA
TATCAACACTGGTGCTTCCATTCTACTTGGTGTATTTCTACAAAAAATTG
AAAATGGCGGAAATTGAAACTCAAGAAAAACCTTGACAAGTCTGATATGA
ATTTCAAGATGTATTTGTTAAGTTGTTAAAACTTGTGAAATTATTTTTTG
GCTTAAACTAGTTCCTGGTTATTTGATCAAAAAGTTTTGTGTATATGAAA
TGTGAGTATATTGAACTGTACTCATGATAGTTTAAAAAGATTTTGGCGGA
TATTTTTATTCGCGAGTTTTAAGATTTTAACATTCAAAAGCTGATTTGAC
TTATTCCTGAGTTAATTATTTGTGACCTAATTACCTTTTACAGGAGAAGT
ATGAAATCGATTGTTTCCCCGATTTTAATGTTTTCATTTATTTTCGAAAC
CTACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033388XLOC_033388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052846-exon-scaffold_220-1575043694:189452..190034TCONS_00052846-exon-scaffold_220-1575043694:189452..190034Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:188535..188581TCONS_00052846-exon-scaffold_220-1575043694:188535..188581Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:187313..187389TCONS_00052846-exon-scaffold_220-1575043694:187313..187389Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:186822..186917TCONS_00052846-exon-scaffold_220-1575043694:186822..186917Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:185328..186460TCONS_00052846-exon-scaffold_220-1575043694:185328..186460Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:184614..184739TCONS_00052846-exon-scaffold_220-1575043694:184614..184739Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:181751..181917TCONS_00052846-exon-scaffold_220-1575043694:181751..181917Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:181123..181260TCONS_00052846-exon-scaffold_220-1575043694:181123..181260Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:180301..180521TCONS_00052846-exon-scaffold_220-1575043694:180301..180521Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:179754..179827TCONS_00052846-exon-scaffold_220-1575043694:179754..179827Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:179264..179387TCONS_00052846-exon-scaffold_220-1575043694:179264..179387Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1575043694:178327..178762TCONS_00052846-exon-scaffold_220-1575043694:178327..178762Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:189452..190034TCONS_00052846-exon-scaffold_220-1510915933:189452..190034Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:188535..188581TCONS_00052846-exon-scaffold_220-1510915933:188535..188581Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:187313..187389TCONS_00052846-exon-scaffold_220-1510915933:187313..187389Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:186822..186917TCONS_00052846-exon-scaffold_220-1510915933:186822..186917Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:185328..186460TCONS_00052846-exon-scaffold_220-1510915933:185328..186460Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:184614..184739TCONS_00052846-exon-scaffold_220-1510915933:184614..184739Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:181751..181917TCONS_00052846-exon-scaffold_220-1510915933:181751..181917Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:181123..181260TCONS_00052846-exon-scaffold_220-1510915933:181123..181260Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:180301..180521TCONS_00052846-exon-scaffold_220-1510915933:180301..180521Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:179754..179827TCONS_00052846-exon-scaffold_220-1510915933:179754..179827Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:179264..179387TCONS_00052846-exon-scaffold_220-1510915933:179264..179387Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1510915933:178327..178762TCONS_00052846-exon-scaffold_220-1510915933:178327..178762Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:189452..190034TCONS_00052846-exon-scaffold_220-1491911889:189452..190034Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:188535..188581TCONS_00052846-exon-scaffold_220-1491911889:188535..188581Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:187313..187389TCONS_00052846-exon-scaffold_220-1491911889:187313..187389Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:186822..186917TCONS_00052846-exon-scaffold_220-1491911889:186822..186917Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:185328..186460TCONS_00052846-exon-scaffold_220-1491911889:185328..186460Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:184614..184739TCONS_00052846-exon-scaffold_220-1491911889:184614..184739Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:181751..181917TCONS_00052846-exon-scaffold_220-1491911889:181751..181917Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:181123..181260TCONS_00052846-exon-scaffold_220-1491911889:181123..181260Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:180301..180521TCONS_00052846-exon-scaffold_220-1491911889:180301..180521Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:179754..179827TCONS_00052846-exon-scaffold_220-1491911889:179754..179827Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:179264..179387TCONS_00052846-exon-scaffold_220-1491911889:179264..179387Clytia hemisphaericaexon
TCONS_00052846-exon-scaffold_220-1491911889:178327..178762TCONS_00052846-exon-scaffold_220-1491911889:178327..178762Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:178327..190034 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	3.68927	3.97769	0.613485	0.754145	1.95295	0.983606	3.19422	11.1736	3.95503	3.99158	0.84985	7.09347	5.71576	7.15036	3.89204	1.4179	2.77096	4.25651	4.76558	3.0034	0	0	1.08636	1.80662
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052846 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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