TCONS_00052847 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052847
Unique NameTCONS_00052847
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3148

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052847 ID=TCONS_00052847|Name=TCONS_00052847|organism=Clytia hemisphaerica|type=transcript|length=3148bp
AAAGAAACATGTTTTGTAAGAGTTGTAACAATCTAGATTTTCAAGTCTGG
TTAGTTTGTTTTTGCCAGAAATGTGACAAGCCCTATGTTTTCATTGTCAT
TAGCATAGAAACAACAACCATATAGAACTTATACTCAGAGTATCTTAACA
CATTTCTTGTCAAGCAGCAAGCATTATAGACGTTCTATTTAGAGGTTgaa
gtttattatttttgttagACAACAATGGGTTTCGGTGAAATATCAGTGCA
TCAATGTCGACAGAAAAGCTATCTCTTCATCTTTACAATTGCTTCTTGTT
TCCAAGTCATAATATCATCGTGTATTTTATTTGGTTATTCGTCATTACTG
GTCATTTTCAAAGACTTACGACTTTACAGAACCTCTTGTGTGGAGAACCT
TCACGCACAAAACACAACAACTTTAATGACCTTACAACAACAAATACCAA
ACCAATCATGTACGGCTAGGGATGAAGCTCTCAATTTGCCGTTTGCTGTT
GgtgttattttcttttcagtGGTCAAAATACCACTTGGAAGTATTATTGA
TTCTTTTGGTGCAAAATCGTCACAATATATTGGATGTTGCACTCTGATGC
TGTTTGGTTTAAGCATGGCTTACATTGAAGAAGgtGTCGAATATTTTGTT
CGTAAAGAATagagcactttcactttcgttatTGAGTGGATGTGTGGACG
GCTCGAcggtcattttcatcatttttctgAAAATGATGGATGCATTGGAT
GCAAAAATGCTCCATTTACCTAAACCTTAAAGTTACTTTGTTGAATGATT
CTTGAAAATATTGgatatattttattttggtgTTATGGACTATTGTATTG
TATGGTatgtttttggttttataaGTTGCATTCGTTGAGGTAAGCATGCA
ACGCGAGGGGTAGTTTACTGATGAGCACTCATGTGTCTATCTTATAGATA
TAAATGGGGGTCGGGACTCAGAGTTTGTAAAACAGGCTTTAGGAAAAGGG
CGAAGGGTTTTATTATttggttttcattttttgttcaagGGATTTGATAA
GATAGACACAGAAGtgtttcaaaaacaacaaaaacgaaaaaacaaacatt
ttcggAACATTTGGCAAATGAAAAGTAACATTACCCCTCTCACACAATTT
GTTTTGGACTTGGAGCTGGATGGAATTGAAATAAATGGGCTTGAACTGGA
AAGCCTACACACCAAGaatcaaaagattttaagagctttacaaaaaagtt
tttcagacGTCAGACGTCTATGATTAGCAAATCTTAAAAACCGATGTCGG
CTATTATTTATCCGACATGAGCCTTTTGTTGGTAAGTATAAAAAGCTAAT
AAAAAATGACCACGACATTATGCATAGTGTGAAGGTCACTAAGCTAACCC
ACGTTGTCACAAAAGACCATGGTCCCACTGGGAGAAGAATACTAAATTAC
AAGTAGGAAGGGGTAAATAGATCCTTTGGCTAAGGGGATTCTCATCTTAA
ACCATGGTCTTATCTCCgccatttttttaatcattGGATGACTTTTACCt
tacttttttatctttttaacagGAAATTTATCAGAAGCATATCACGTTTT
CAAGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTGATGATT
GCAACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGA
TGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATA
CAGATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCT
CAAGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTACCATGA
AGCAATTCACAAATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAA
CATTGTTAGCCAGTCTATCTGAAAATCTGGCTATACAGTTTTCCAATAGA
AGTTACGATGCAAACGATCACAAGATACAGTATTTACCGAGCCGACCGTA
CGGTACGATTATGGAAGGGTCTGTTGGCTATCAACAAGATTCTTATTCTG
CGTCATCACACCTTGTATTCAACATAAAAAACAATAAGGAGGACGAAAAG
ACGCTCCTGTTACCAATTCAACCTACCAGGGAAGAGCACCTGACCCCCTA
CTCAGGACATAAACTACGGCAATACATCTTTTCGAAGTTGATGATCTTTG
GCACATACACAGCTAGTGTGATGATGTTCAAGATTGTTTATTTCATCGGA
AATTTGGACAAATATCTTAACAAATTGACCGATACTGAGACAGCAACTTT
GTatatcaaatattttggatatgTTCAGTTCGGTGGAATTATCGCTGCAC
CGATCTGCAGTATGTTATTTCGTGAGAATGTGGGAACCGAAAGATTATCT
GCTCATCAAGATTTcgttaaaaaagtcaaaattttaatCCTTCCTGGTTT
TCTTCTCATCTTGTTCATCGTGCTTATCGATGTCTTACAACTCGTTCAAA
ACATTTATCTATCGgTTCCAATTTTCATTCTGTTTTTGTTTGGGAACAGT
TTGGTGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTTTCCGGCCAA
GTACTACTGCACCTTGTATGGCATCGCAACGGGAGTATCTGGAGCTGTCT
CTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATTCTCTTTTCCACGGA
GAACAATTCTATACGAACCTTCTCATGTTGGGATTACTTATATCAACACT
GGTGCTTCCATTCTACTTGGTgtatttctacaaaaaattgaaaatggcgG
AAATTGAAACTCAAGAAAAACCTTGACAAGTCTGATATGAATTTCAAGAT
GTATTTGTTAAGTTGTTAAAACttgtgaaattattttttggcttaaacTA
GTTCCTGGTtatttgatcaaaaagttttgtGTATATGAAATGTGAGTATA
TTGAACTGTACTCATGATagtttaaaaagattttggcGGATATTTTTATT
CGCGAGTTTTAAGATTTTAACATTCAAAAGCTGATTTGACTTATTCCTGA
GTTAATTATTTGTGACCTAATTACCTTTTACAGGAGAAGTATGAAATCGA
TTGTTTCCCcgattttaatgttttcatttattttcgaAACCTACGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_220:178327..190037-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052847 ID=TCONS_00052847|Name=TCONS_00052847|organism=Clytia hemisphaerica|type=transcript|length=11711bp|location=Sequence derived from alignment at scaffold_220:178327..190037- (Clytia hemisphaerica)
AAAGAAACATGTTTTGTAAGAGTTGTAACAATCTAGATTTTCAAGTCTGG
TTAGTTTGTTTTTGCCAGAAATGTGACAAGCCCTATGTTTTCATTGTCAT
TAGCATAGAAACAACAACCATATAGAACTTATACTCAGAGTATCTTAACA
CATTTCTTGTCAAGCAGCAAGCATTATAGACGTTCTATTTAGAGGTTGAA
GTTTATTATTTTTGTTAGACAACAATGGGTTTCGGTGAAATATCAGTGCA
TCAATGTCGACAGAAAAGCTATCTCTTCATCTTTACAATTGCTTCTTGTT
TCCAAGTCATAATATCATCGTGTATTTTATTTGGTTATTCGTCATTACTG
GTCATTTTCAAAGACTTACGACTTTACAGAACCTCTTGTGTGGAGAACCT
TCACGCACAAAACACAACAACTTTAATGACCTTACAACAACAAATACCAA
ACCAATCATGTACGGCTAGGGATGAAGCTCTCAATTTGCCGTTTGCTGTT
GGTGTTATTTTCTTTTCAGTGGTCAAAATACCACTTGGAAGTATTATTGA
TTCTTTTGGTGCAAAATCGTCACAATATATTGGATGGTATGTACCCCAAC
CTGAAACAAATTGTGTTTTTATTGTCTTTGACATTTTATTCCTGTTGAGA
TGGTTCCACATGAGTCTTTTAAGAAAGCGGCGAAATTCTGGTAAAAAACT
TCTTATTACCCTCCCTCGTCAACCTCGTTCTCTTTTAACTATCCCAGCTC
ATACGCTCACTTTTACCACGGTATATCGTTTCAAATTTGTGAACAAAATA
TACTCCCTTACAATACAAAGTCCTTTATGAACGATTCCAGTGTTCGAGTT
CGGCTACCAAGCGGACCTAGCTGTAACACCCAAATTTGTCTAATCTATCC
CAGTTGGCACCAACGTTGTTTCAACGTTTATGTTCATAACGTCTATAAAA
CGTTAGGTGAACGTTGAAAAAACGTTGTGTTCCATCTGAGAAAGCTCATC
TTGAAGTGGGGGTGTACAATATTTCCGAATTGCGGAAATCGACCCTTTTT
TCTTCGGAATTTCGGAAATCGAGCAAAATTCCTTCGATATTTCGGAATTC
CGAAATTGTTTCAGTATTGGAAATCCATTTAATTTGGCTTCGAAATTTTG
GTATTATAAAGTTTTTATCTCCCTTTTTCGAAATTCATACATAAAAAATC
AAATTTGATAAAAAATTAGTCAAACGAGGAAAAATACCCAAAAAATCGGT
ATCGGAACTGCAAGTATTTTTTTTACGGAATTTCGAAAATTTTGGCAAAA
TTATTCTGTATTTTGGAAATCGTAAACCCGTACGCCCACCACCTTGAATT
GTATATTTATGGTTATTTCTATGTTTATTTTATTTTTTTAAACACATTTT
GCTCCCGTCTCCTATTTAGATAGGTGTGTTTACGCAACTTTCTTCTTCTA
TTTTAGTTGCACTCTGATGCTGTTTGGTTTAAGCATGGCTTACATTGAAG
AAGGTAATTTTTTCTTCGTAGGATACGTCCACAGGTTAGAAATCTTTCGA
TATTTTGCTTTTACTTTACGCTTATCGTTCATTTTCTCTTTTCAGTGCAT
TTTATAACAAATCATTTTTTGATCGAATATCTTTCCCCGTACATTTTCAC
AGTCGATTTCTGTCTACTACAAAGAAAATTATTTATTGAGAATCTTCCAA
AGTAAAATAACAGCAGTGCTTTCCCTGACCCAACCTTTGATTACTATTTT
GACGAAATTCCTTTCCACTTTGAGATTTCTTTGAATTTCTAAAAATTTTA
TTTTAAATCATTATTTTATATATTCGTCTATTTATAAGTTTAGGATGTTT
GATGGTTTTGTAGTTTTTGAAAAGTCAAGTCTAATCAACAGTGACGACCC
AAAGGGTGGTAAATGTCTCAAACATAAACAGACAGTGCTCTCGAAAATAA
AGTTATTTTTATATAAAGTAAGTTTCTTGAATCTTCAAGAAAATAACGAG
AAATGAGAGATAAATGAATAAAGATTAGCTGCAGTGAAAAATCGTGCCCA
GTGAGAAAAATACCGAAAAATTCCATCCCTATTGGAAACCTTACTAGAAA
AGAGACCATGATTTTGCAAATCCTCCTTGGTGTTTTAATTTGAAAATGAT
ACAATCTTAAATACTACTTGCGACATCTAAATTTCTTTGATGTTATGGTT
TTATGCGTGTTAAAACGTCCCAGGGTGACCATGAAAATCTTAAAATTTCA
CACGGGTTTGATTTACAGGTCTCAAAATCTCATCAGAGCCGATGTGACCG
GATGACTGATACAGGAGTGTGTTAAAGGTTAAAATATTTTCCTCGGGTCA
GGATAAAATTCATATTGAAATCCTTATGGGAAAATAAATTCTATTGTTTC
AAGGTTAAAAAGTCATTGAATTTCGAGCGGGATGAAATCAAAGTCGTTTT
CCAAGTTGGAATGAAATTTAAGAGTATTTTCCCATCGGGAACGAAATTTT
GGCCAAATTTTCCAGTGGGGCTTGGATCCCAACGGGTTTGACACAGTAGT
GCAGACAGGGTTTTGCTTAGAAGAAGCTTTATATTTAGCTAATTCTTATT
TGATTATTCACTTACTGATACAGAACTCCTTATCGCTTTATATTTCAGGC
AAAGAATATTTGTTATTTATCTCGTTCGTTTTTCTTTCCATCTCATCCTC
CTTGTTAATGCTATGTCCATATCAGGTTAGTATTTTACAAAACTACAACA
TGATGTTTCATTGGCCGAGAGGTAATAACATATATAAAAGTAATTCAGGA
GAAAGAAGATAACCCTGATTGACTAGTCATTGTGCAGGGCAGTGAAAATA
AATGCTAAAAGTTTCATTTTACGTCATAAAACAGTATCAAGAAAATCAAG
AGAAATATTATCCCGTGTCTTATGTTTTACGTTTTACAGTTTGGATTATG
GAATGATTCGAATTATTGTAAGTACAATGAGAGTTTCCCTATGACGGGAA
CACAGTGTTATTTGTAGTATAATGAGTCTTTGAGGAAGTTTATTCGACTT
GTTAGACATCCAGAGAAATGGGGGAGATCAGTCATCGAGGTATTAACTGA
TGCCTTTGTTTTGATTTTAGGTGTCGAATATTTTGTTCGTAAAGAATAGA
GCACTTTCACTTTCGTTATTGAGTGGATGTGTGGACGGCTCGACGGTCAT
TTTCATCATTTTTCTGGTGAGTCTCTTTATTCAATTAATCAACAAAAAAA
TATCTAGCCCAACAGTCAGTTATTTTCTAGATGATTAGTAGAGAAAGGAA
CAGGGCTTTTGCCTAAAAAGACATAATTTTGGCAATAATCTTTCCAATTG
AATAAGAGATTCCAAAATGGACACGTGTTTTTTCGAACGTTTTTTAAGGA
AGTCGGGATGTTTTCGGAAAAACAAGGAATTGATATTGGGAAATATTGGG
AAATACACGCATTCAAATGAAATGCGAGCCCTGTAAACTTGGAACCTCAA
TAATTACATCGTTTTTTTTCTGCTGTATCTATTTTGTTCCAATACAGTTG
TCTTTTATCAGTCACTTCCTCCCATAGAAAATGATGGATGCATTGGATGC
AAAAATGCTCCATTTACCTAAACCTTAAAGTTACTTTGTTGAATGATTCT
TGAAAATATTGGATATATTTTATTTTGGTGTTATGGACTATTGTATTGTA
TGGTATGTTTTTGGTTTTATAAGTTGCATTCGTTGAGGTAAGCATGCAAC
GCGAGGGGTAGTTTACTGATGAGCACTCATGTGTCTATCTTATAGATATA
AATGGGGGTCGGGACTCAGAGTTTGTAAAACAGGCTTTAGGAAAAGGGCG
AAGGGTTTTATTATTTGGTTTTCATTTTTTGTTCAAGGGATTTGATAAGA
TAGACACAGAAGTGTTTCAAAAACAACAAAAACGAAAAAACAAACATTTT
CGGAACATTTGGCAAATGAAAAGTAACATTACCCCTCTCACACAATTTGT
TTTGGACTTGGAGCTGGATGGAATTGAAATAAATGGGCTTGAACTGGAAA
GCCTACACACCAAGAATCAAAAGATTTTAAGAGCTTTACAAAAAAGTTTT
TCAGACGTCAGACGTCTATGATTAGCAAATCTTAAAAACCGATGTCGGCT
ATTATTTATCCGACATGAGCCTTTTGTTGGTAAGTATAAAAAGCTAATAA
AAAATGACCACGACATTATGCATAGTGTGAAGGTCACTAAGCTAACCCAC
GTTGTCACAAAAGACCATGGTCCCACTGGGAGAAGAATACTAAATTACAA
GTAGGAAGGGGTAAATAGATCCTTTGGCTAAGGGGATTCTCATCTTAAAC
CATGGTCTTATCTCCGCCATTTTTTTAATCATTGGATGACTTTTACCTTA
CTTTTTTATCTTTTTAACAGGAAATTTATCAGAAGCATATCACGTTTTCA
AGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTGATGATTGC
AACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGATG
TTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATACA
GATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCTCA
AGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTACCATGAAG
CAATTCACAAGTAAGCTAGCTAAAACTTTATATCAAATCAAATTTGTATG
ACTCAAAAACTGACGTAACAAGTAAAACCAGTTGACTCCAAAAATGTGAC
GGGATTTCCCGAAACCACTTAAAGCCGGTCTCCACTTGCACGCACTGCGA
TCGCACTTTTTGGCTTCCATCCATTTTTCTTGGAAAAAAAATACTTCATA
AAAATATAGCACGCGCTCGAAAAATTAACCGTCACGTCAGATTGCACCAA
TGGAGTTGCTACATTTTTCTTTTGACCAATAGCGTGGAAGCTTTGCTCGA
AAAAGTGCGATCGCAGCGCGCGCAAGTGGAGACCGGCCTTTATACCAATC
GGAAGCTCTCAAAATCGATATAGAGGACTTTTAAGTGAATATAGTCGACT
TCCCAATCTCGAGAAAATTTAAGTCAGTTTTGACGTCATTTCCATTCGAT
TTACTCGAGTTACGCTCTAGCTGGCAGTAATGTTTTTTGACAGATTTAAT
TAGTCACCTATATCTTCTTTGTTTAATAAGCATTGTACTAACATCTTCTC
TTCATTTGGTATAAAACACTTCAACTATTTTTCTTCACTTTTCTTCAGAT
CGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACATTGTTAGCCAGT
CTATCTGAAAATCTGGCTATACAGTTTTCCAATAGAAGTTACGATGCAAA
CGATCACAAGATACAGTATTTACCGTAAGTATAGACCTTTTCATAAATTA
CGTCACGAATATCACTTGCCTCGTTTTGAAATCATGACCATGGTGATTAA
CTCCCAGCGGATTTTATTAAAACTACCTCCTATTCATAAAAGAATCGTTT
AATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGCAA
GTGATGTTCATGACGTAATTTATGAAAAGGTCTATTCGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAATCGTTTAATGTCTC
AAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGCAAGTGATGTT
CATGACGTAATTTATGAAAAGGTCTATTCGGGATAATTCTTATCAAGTGC
CGGATCTAAAGAGAGGTTCAAAATTTATAGCGGTGAGTGCTTTTGTAAGG
GCTATAATCCTTATCCCTAATAAGGAAAAAGTCTTTGTGATAGACTTTGA
ACCCCCTCAAATCTGCCACTGTCATCAGTAGAACTAACCCACGATCCTAG
TTTAACGTTCACATAACGTCAAGGACGCAATCTATGGAACTGTTTTCACT
TTCCGTCGGCTGTAAATCTTACTGAAGAAACCTGTCAATCAGATTGAAAT
GGCTTATTGGTCCAAGTTGCGTTATTTCAGAAATGTCACCCAGATTAGGG
TCTTTTTAAGTATGATAGATTTTGCCTAATTATGGTTTTTTTATTGATTA
TTTGACATATTTCCTACTAGGAGCCGACCGTACGGTACGATTATGGAAGG
GTCTGTTGGCTATCAACAAGATTCTTATTCTGCGTCATCACACCTTGTAT
TCAACATAAAAAACAATAAGGAGGACGAAAAGACGCTCCTGTTACCAATT
CAACCTACCAGGGAAGAGCACCTGACCCCCTACTCAGGTAAAAGCTGTTT
TTCTTTCAGCGTTTATCTTAAATACACGTTTTTTTTTATAAGAACAAACT
ATATAAGAACATAAGGCTTCGATGGCCAAATTCTTAAGAACAAGTCAAGA
ACATTTTAAGCTTTCGTGGGCTCTAGAACACCCAATTTTTTTGGAAAATG
GTCAAAAATACTAAAAAAATAGCGAAAATAAGAACATGTTTAGAACATTT
TTAGGCCTGAAAGTAAAAAGTTTAAGAACATCCGAAGGTTTCAAAAACTT
TTGATGTTCTTATGAAAAAAAACGTGTACCATTAGTTTGGCTGACGTTTT
AGTAGCTTAACTCAAGCTAATCTACACTAAATGAAGATTTTTATTTGGAT
AGAAATCTTTTTTCAACTATCTTTTTAGGTATTTACTTGAATTTGTTTCA
TTGATATGATTCTCAAGTTTCGGCTAGATGAATTGTGAATTTTATGGCTG
ACTTTTTTCATTTTTCTGTATTTGAAGGACATAAACTACGGCAATACATC
TTTTCGAAGTTGATGATCTTTGGCACATACACAGCTAGTGTGATGATGTT
CAAGATTGTTTATTTCATCGGAAATTTGGACAAATATCTTAACAAATTGA
CCGATACTGAGACAGGTAACCTTTGTTTCACTAATTTATAGGATACATGT
TTTTCCTTTTATAAACTCAATCGGCTTGTTCCTAATTTTGTCAGCTTGTT
AAAGTATATACACTTTGATTTAATTATTTCCATCTTTTAGAATGCTAATC
TACTACTGTAATATCGCTTAAAAAAACAATTTCTTCGAGAGACTTTTTTG
TCTAACACAGTCCATACCCTGACCCTACTGCATAAAAAGACGTATGACTA
CAAAAATATTACCTTCGCTTGAGCCCCTTAGCAATAAATAAAATTACTAG
AGTTTGTAAGCTTCGTCGCGAACCAACATTATCCAATAAGACTCGTAACT
CACAACCATAGGGCATAGCATTGGCGGACAATAGCTTTTACCCCCCGGAC
AAGCATCTGCTGACCCCCCGGACACCCCAAATTACCCCCGGACAAGGCAA
ATTTTGATGATTTTTTGCTACCCCCCGGACAAAATATCCTCCACCCCCCA
TGTACAATTTTTTTCTGGAAGAGCCCAATAGTAATTCATGTGTTTTCCCA
CTCTCTCATAGCAANCATAGCATTGGCGGACAATAGTAATTCATATGTTT
TCCCACTCTCTCATAGCAACTTTGTATATCAAATATTTTGGATATGTTCA
GTTCGGTGGAATTATCGCTGCACCGATCTGCAGTATGTTATTTCGTGAGA
ATGTGGGAACCGAAAGATTATCTGCTCATCAAGATTTCGTTAAAAAAGTC
AAAATTTTAATCCTTCCTGGTTTTCTTCTCATCTTGTTCATCGTGCTTAT
CGATGTCTTACAACTCGTTCAAAACATTTATCTATCGGTAAGCTGTTACA
ACTTTTTTATAAAAACTATTTGGGGGGAGGGGTACTACCTTGCCGACCGA
CGGTGTGTCCGCTGAAGTTAAAAAAATGGACCCTACATTGGACTCGTTTT
TTTTTACATTTTGCCAAAGTTTTCGAAAAAGTGCCCTTGAATGGGATTAA
AATTTCGACCATACTTGGGACTCATTGAGGTGAAAAAGGTATCCTGACCA
GTACATCCCCGTACCCCTTTTTGCCCAAGTACCCCCGGGGAACTATTTCT
TATAATTCAGTCAAAACTTATAAACAAATCATAGACAATTGAACCCTTCA
TAACTTCATAGACCTTAAGTGTGAAGAAACTAAGCATAAGTCACTTTTTC
GAAAGAGATCCTTGACATTAGGGGTATGTTTTCCATTTAAAAACTTCAAT
TTTCCTGTTATCGATAACTATTCCTAGATTCTTCAAGTGAAATAAACTTC
TTTTTTTCAGGTTCCAATTTTCATTCTGTTTTTGTTTGGGAACAGTTTGG
TGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTAAGTAGTTCCCCTT
TGAATTACAGTGGAGTTTTCATAACTCAAACTTTTATAACTCGAAAGACT
CCTTAACTCGAACAATGCCTTATAAACTAAGCTCCGTAACTCGAACTTCC
TTAACTTGACAAAAATTGTATTCCTTGTGCGTATTCGAGTTACGAAAACT
TCACTAGGTTTCAATCCTGTTAGAAGTTGCCTCGGAAGTAAACCCACCTA
AAACACATCCCAAACCAGCTGTCACTCCCTCCAGGACCTAATAAACTAGA
GAAATCAGTCTTTAAAACCACTGTAAAACACCAAAGACCCTTAAAAAGGT
ACATTGATTGACGGTTATTATATTGTAACGCTTTTTTCTTCGTATTTCAG
GTTTCCGGCCAAGTACTACTGCACCTTGTATGGCATCGCAACGGGAGTAT
CTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATTCT
CTTTTCCACGGAGAACAATTCTATGTAAGTCTTCAAAACCAAAAACTCGA
ACCCAGTCCCTTAGTTTTCTTTTCATGACTCCAAAAGTTTCATATCAAGT
CCATCAATAAAATCAAAAAAAAGTTTTACCCTAATAATCGTCTACTATAT
TGAAATATTAACAAAGGGCAATTCTTTTTGAGGAAAATCTCAACCCTTAG
TTTAGAATATAAATGCTAAGGTGAATGTATGTAACTTTGGTAAAATCCAA
TGGGAGGATATTAAGGGAAGCATCCAGTATTAATTGATTTTGGCATAACA
ATGAAAACTTTATAATAATTACAGTTAACTCTCGCTAATTCGAACTCGAT
CCTCAACTCTAATTTATTCGAATTCAAGAGAGATTCGAATTATAGAGAGT
AAGTTTCTCCTTGACGGTAACTGACAAAAAGTTCGAATTATAGAAAGATT
TCGAATATAGAAGTTCGAATTGGCGAGAGTCTATTGTAGTTTTAAAAGCA
TATATAATTTTTCTTCTCTATATAGACGAACCTTCTCATGTTGGGATTAC
TTATATCAACACTGGTGCTTCCATTCTACTTGGTGTATTTCTACAAAAAA
TTGAAAATGGCGGAAATTGAAACTCAAGAAAAACCTTGACAAGTCTGATA
TGAATTTCAAGATGTATTTGTTAAGTTGTTAAAACTTGTGAAATTATTTT
TTGGCTTAAACTAGTTCCTGGTTATTTGATCAAAAAGTTTTGTGTATATG
AAATGTGAGTATATTGAACTGTACTCATGATAGTTTAAAAAGATTTTGGC
GGATATTTTTATTCGCGAGTTTTAAGATTTTAACATTCAAAAGCTGATTT
GACTTATTCCTGAGTTAATTATTTGTGACCTAATTACCTTTTACAGGAGA
AGTATGAAATCGATTGTTTCCCCGATTTTAATGTTTTCATTTATTTTCGA
AACCTACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033388XLOC_033388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052847-exon-scaffold_220-1575043694:189452..190037TCONS_00052847-exon-scaffold_220-1575043694:189452..190037Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:188535..188581TCONS_00052847-exon-scaffold_220-1575043694:188535..188581Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:186822..186917TCONS_00052847-exon-scaffold_220-1575043694:186822..186917Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:185328..186460TCONS_00052847-exon-scaffold_220-1575043694:185328..186460Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:184614..184739TCONS_00052847-exon-scaffold_220-1575043694:184614..184739Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:181751..181917TCONS_00052847-exon-scaffold_220-1575043694:181751..181917Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:181123..181260TCONS_00052847-exon-scaffold_220-1575043694:181123..181260Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:180301..180521TCONS_00052847-exon-scaffold_220-1575043694:180301..180521Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:179754..179827TCONS_00052847-exon-scaffold_220-1575043694:179754..179827Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:179264..179387TCONS_00052847-exon-scaffold_220-1575043694:179264..179387Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1575043694:178327..178762TCONS_00052847-exon-scaffold_220-1575043694:178327..178762Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:189452..190037TCONS_00052847-exon-scaffold_220-1510915933:189452..190037Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:188535..188581TCONS_00052847-exon-scaffold_220-1510915933:188535..188581Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:186822..186917TCONS_00052847-exon-scaffold_220-1510915933:186822..186917Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:185328..186460TCONS_00052847-exon-scaffold_220-1510915933:185328..186460Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:184614..184739TCONS_00052847-exon-scaffold_220-1510915933:184614..184739Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:181751..181917TCONS_00052847-exon-scaffold_220-1510915933:181751..181917Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:181123..181260TCONS_00052847-exon-scaffold_220-1510915933:181123..181260Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:180301..180521TCONS_00052847-exon-scaffold_220-1510915933:180301..180521Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:179754..179827TCONS_00052847-exon-scaffold_220-1510915933:179754..179827Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:179264..179387TCONS_00052847-exon-scaffold_220-1510915933:179264..179387Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1510915933:178327..178762TCONS_00052847-exon-scaffold_220-1510915933:178327..178762Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:189452..190037TCONS_00052847-exon-scaffold_220-1491911889:189452..190037Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:188535..188581TCONS_00052847-exon-scaffold_220-1491911889:188535..188581Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:186822..186917TCONS_00052847-exon-scaffold_220-1491911889:186822..186917Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:185328..186460TCONS_00052847-exon-scaffold_220-1491911889:185328..186460Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:184614..184739TCONS_00052847-exon-scaffold_220-1491911889:184614..184739Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:181751..181917TCONS_00052847-exon-scaffold_220-1491911889:181751..181917Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:181123..181260TCONS_00052847-exon-scaffold_220-1491911889:181123..181260Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:180301..180521TCONS_00052847-exon-scaffold_220-1491911889:180301..180521Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:179754..179827TCONS_00052847-exon-scaffold_220-1491911889:179754..179827Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:179264..179387TCONS_00052847-exon-scaffold_220-1491911889:179264..179387Clytia hemisphaericaexon
TCONS_00052847-exon-scaffold_220-1491911889:178327..178762TCONS_00052847-exon-scaffold_220-1491911889:178327..178762Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:178327..190037 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	1.27861e-07	1.2845	0	0.0398692	0.266032	0.000328176	4.57085e-06	0.0135627	0.122817	0	0	1.85909e-05	0.000148449	4.37857e-06	0.202438	0.000255091	0.33745	0.00192549	2.6606	4.1656	0.127794	0.266991	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052847 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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