TCONS_00052850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052850
Unique NameTCONS_00052850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2554

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052850 ID=TCONS_00052850|Name=TCONS_00052850|organism=Clytia hemisphaerica|type=transcript|length=2554bp
AAATTCAGAAATAAAGAAACATGTTTTGTAAGAGTTGTAACAATCTAGAT
TTTCAAGTCTGGTTAGTTTGTTTTTGCCAGAAATGTGACAAGCCCTATGT
TTTCATTGTCATTAGCATAGAAACAACAACCATATAGAACTTATACTCAG
AGTATCTTAACACATTTCTTGTCAAGCAGCAAGCATTATAGACGTTCTAT
TTAGAGGTTgaagtttattatttttgttagACAACAATGGGTTTCGGTGA
AATATCAGTGCATCAATGTCGACAGAAAAGCTATCTCTTCATCTTTACAA
TTGCTTCTTGTTTCCAAGTCATAATATCATCGTGTATTTTATTTGGTTAT
TCGTCATTACTGGTCATTTTCAAAGACTTACGACTTTACAGAACCTCTTG
TGTGGAGAACCTTCACGCACAAAACACAACAACTTTAATGACCTTACAAC
AACAAATACCAAACCAATCATGTACGGCTAGGGATGAAGCTCTCAATTTG
CCGTTTGCTGTTGgtgttattttcttttcagtGGTCAAAATACCACTTGG
AAGTATTATTGATTCTTTTGGTGCAAAATCGTCACAATATATTGGATGTT
GCACTCTGATGCTGTTTGGTTTAAGCATGGCTTACATTGAAGAAGGCAAA
GAATATTTGTTATTTATCTCGTTCGTTTTTCTTTCCATCTCATCCTCCTT
GTTAATGCTATGTCCATATCAGgtGTCGAATATTTTGTTCGTAAAGAATa
gagcactttcactttcgttatTGAGTGGATGTGTGGACGGCTCGAcggtc
attttcatcatttttctgAAAATGATGGATGCATTGGATGCAAAAATGCT
CCATTTACCTAAACCTTAAAGTTACTTTGTTGAATGATTCTTGAAAATAT
TGgatatattttattttggtgTTATGGACTATTGTATTGTATGGTatgtt
tttggttttataaGTTGCATTCGTTGAGGAAATTTATCAGAAGCATATCA
CGTTTTCAAGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTG
ATGATTGCAACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTT
CATTGATGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATG
AAGATACAGATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATG
CGATCTCAAGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTA
CCATGAAGCAATTCACAAATCGCTTGAACAGATAAAGGAAGCTGAGCGCC
GTGAAACATTGTTAGCCAGTCTATCTGAAAATCTGGCTATACAGTTTTCC
AATAGAAGTTACGATGCAAACGATCACAAGATACAGTATTTACCGAGCCG
ACCGTACGGTACGATTATGGAAGGGTCTGTTGGCTATCAACAAGATTCTT
ATTCTGCGTCATCACACCTTGTATTCAACATAAAAAACAATAAGGAGGAC
GAAAAGACGCTCCTGTTACCAATTCAACCTACCAGGGAAGAGCACCTGAC
CCCCTACTCAGGACATAAACTACGGCAATACATCTTTTCGAAGTTGATGA
TCTTTGGCACATACACAGCTAGTGTGATGATGTTCAAGATTGTTTATTTC
ATCGGAAATTTGGACAAATATCTTAACAAATTGACCGATACTGAGACAGC
AACTTTGTatatcaaatattttggatatgTTCAGTTCGGTGGAATTATCG
CTGCACCGATCTGCAGTATGTTATTTCGTGAGAATGTGGGAACCGAAAGA
TTATCTGCTCATCAAGATTTcgttaaaaaagtcaaaattttaatCCTTCC
TGGTTTTCTTCTCATCTTGTTCATCGTGCTTATCGATGTCTTACAACTCG
TTCAAAACATTTATCTATCGgTTCCAATTTTCATTCTGTTTTTGTTTGGG
AACAGTTTGGTGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTTTCC
GGCCAAGTACTACTGCACCTTGTATGGCATCGCAACGGGAGTATCTGGAG
CTGTCTCTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATTCTCTTTTC
CACGGAGAACAATTCTATACGAACCTTCTCATGTTGGGATTACTTATATC
AACACTGGTGCTTCCATTCTACTTGGTgtatttctacaaaaaattgaaaa
tggcgGAAATTGAAACTCAAGAAAAACCTTGACAAGTCTGATATGAATTT
CAAGATGTATTTGTTAAGTTGTTAAAACttgtgaaattattttttggctt
aaacTAGTTCCTGGTtatttgatcaaaaagttttgtGTATATGAAATGTG
AGTATATTGAACTGTACTCATGATagtttaaaaagattttggcGGATATT
TTTATTCGCGAGTTTTAAGATTTTAACATTCAAAAGCTGATTTGACTTAT
TCCTGAGTTAATTATTTGTGACCTAATTACCTTTTACAGGAGAAGTATGA
AATCGATTGTTTCCCcgattttaatgttttcatttattttcgaAACCTAC
GAAA
Run BLAST on NCBI

transcript from alignment at scaffold_220:178327..190049-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052850 ID=TCONS_00052850|Name=TCONS_00052850|organism=Clytia hemisphaerica|type=transcript|length=11723bp|location=Sequence derived from alignment at scaffold_220:178327..190049- (Clytia hemisphaerica)
AAATTCAGAAATAAAGAAACATGTTTTGTAAGAGTTGTAACAATCTAGAT
TTTCAAGTCTGGTTAGTTTGTTTTTGCCAGAAATGTGACAAGCCCTATGT
TTTCATTGTCATTAGCATAGAAACAACAACCATATAGAACTTATACTCAG
AGTATCTTAACACATTTCTTGTCAAGCAGCAAGCATTATAGACGTTCTAT
TTAGAGGTTGAAGTTTATTATTTTTGTTAGACAACAATGGGTTTCGGTGA
AATATCAGTGCATCAATGTCGACAGAAAAGCTATCTCTTCATCTTTACAA
TTGCTTCTTGTTTCCAAGTCATAATATCATCGTGTATTTTATTTGGTTAT
TCGTCATTACTGGTCATTTTCAAAGACTTACGACTTTACAGAACCTCTTG
TGTGGAGAACCTTCACGCACAAAACACAACAACTTTAATGACCTTACAAC
AACAAATACCAAACCAATCATGTACGGCTAGGGATGAAGCTCTCAATTTG
CCGTTTGCTGTTGGTGTTATTTTCTTTTCAGTGGTCAAAATACCACTTGG
AAGTATTATTGATTCTTTTGGTGCAAAATCGTCACAATATATTGGATGGT
ATGTACCCCAACCTGAAACAAATTGTGTTTTTATTGTCTTTGACATTTTA
TTCCTGTTGAGATGGTTCCACATGAGTCTTTTAAGAAAGCGGCGAAATTC
TGGTAAAAAACTTCTTATTACCCTCCCTCGTCAACCTCGTTCTCTTTTAA
CTATCCCAGCTCATACGCTCACTTTTACCACGGTATATCGTTTCAAATTT
GTGAACAAAATATACTCCCTTACAATACAAAGTCCTTTATGAACGATTCC
AGTGTTCGAGTTCGGCTACCAAGCGGACCTAGCTGTAACACCCAAATTTG
TCTAATCTATCCCAGTTGGCACCAACGTTGTTTCAACGTTTATGTTCATA
ACGTCTATAAAACGTTAGGTGAACGTTGAAAAAACGTTGTGTTCCATCTG
AGAAAGCTCATCTTGAAGTGGGGGTGTACAATATTTCCGAATTGCGGAAA
TCGACCCTTTTTTCTTCGGAATTTCGGAAATCGAGCAAAATTCCTTCGAT
ATTTCGGAATTCCGAAATTGTTTCAGTATTGGAAATCCATTTAATTTGGC
TTCGAAATTTTGGTATTATAAAGTTTTTATCTCCCTTTTTCGAAATTCAT
ACATAAAAAATCAAATTTGATAAAAAATTAGTCAAACGAGGAAAAATACC
CAAAAAATCGGTATCGGAACTGCAAGTATTTTTTTTACGGAATTTCGAAA
ATTTTGGCAAAATTATTCTGTATTTTGGAAATCGTAAACCCGTACGCCCA
CCACCTTGAATTGTATATTTATGGTTATTTCTATGTTTATTTTATTTTTT
TAAACACATTTTGCTCCCGTCTCCTATTTAGATAGGTGTGTTTACGCAAC
TTTCTTCTTCTATTTTAGTTGCACTCTGATGCTGTTTGGTTTAAGCATGG
CTTACATTGAAGAAGGTAATTTTTTCTTCGTAGGATACGTCCACAGGTTA
GAAATCTTTCGATATTTTGCTTTTACTTTACGCTTATCGTTCATTTTCTC
TTTTCAGTGCATTTTATAACAAATCATTTTTTGATCGAATATCTTTCCCC
GTACATTTTCACAGTCGATTTCTGTCTACTACAAAGAAAATTATTTATTG
AGAATCTTCCAAAGTAAAATAACAGCAGTGCTTTCCCTGACCCAACCTTT
GATTACTATTTTGACGAAATTCCTTTCCACTTTGAGATTTCTTTGAATTT
CTAAAAATTTTATTTTAAATCATTATTTTATATATTCGTCTATTTATAAG
TTTAGGATGTTTGATGGTTTTGTAGTTTTTGAAAAGTCAAGTCTAATCAA
CAGTGACGACCCAAAGGGTGGTAAATGTCTCAAACATAAACAGACAGTGC
TCTCGAAAATAAAGTTATTTTTATATAAAGTAAGTTTCTTGAATCTTCAA
GAAAATAACGAGAAATGAGAGATAAATGAATAAAGATTAGCTGCAGTGAA
AAATCGTGCCCAGTGAGAAAAATACCGAAAAATTCCATCCCTATTGGAAA
CCTTACTAGAAAAGAGACCATGATTTTGCAAATCCTCCTTGGTGTTTTAA
TTTGAAAATGATACAATCTTAAATACTACTTGCGACATCTAAATTTCTTT
GATGTTATGGTTTTATGCGTGTTAAAACGTCCCAGGGTGACCATGAAAAT
CTTAAAATTTCACACGGGTTTGATTTACAGGTCTCAAAATCTCATCAGAG
CCGATGTGACCGGATGACTGATACAGGAGTGTGTTAAAGGTTAAAATATT
TTCCTCGGGTCAGGATAAAATTCATATTGAAATCCTTATGGGAAAATAAA
TTCTATTGTTTCAAGGTTAAAAAGTCATTGAATTTCGAGCGGGATGAAAT
CAAAGTCGTTTTCCAAGTTGGAATGAAATTTAAGAGTATTTTCCCATCGG
GAACGAAATTTTGGCCAAATTTTCCAGTGGGGCTTGGATCCCAACGGGTT
TGACACAGTAGTGCAGACAGGGTTTTGCTTAGAAGAAGCTTTATATTTAG
CTAATTCTTATTTGATTATTCACTTACTGATACAGAACTCCTTATCGCTT
TATATTTCAGGCAAAGAATATTTGTTATTTATCTCGTTCGTTTTTCTTTC
CATCTCATCCTCCTTGTTAATGCTATGTCCATATCAGGTTAGTATTTTAC
AAAACTACAACATGATGTTTCATTGGCCGAGAGGTAATAACATATATAAA
AGTAATTCAGGAGAAAGAAGATAACCCTGATTGACTAGTCATTGTGCAGG
GCAGTGAAAATAAATGCTAAAAGTTTCATTTTACGTCATAAAACAGTATC
AAGAAAATCAAGAGAAATATTATCCCGTGTCTTATGTTTTACGTTTTACA
GTTTGGATTATGGAATGATTCGAATTATTGTAAGTACAATGAGAGTTTCC
CTATGACGGGAACACAGTGTTATTTGTAGTATAATGAGTCTTTGAGGAAG
TTTATTCGACTTGTTAGACATCCAGAGAAATGGGGGAGATCAGTCATCGA
GGTATTAACTGATGCCTTTGTTTTGATTTTAGGTGTCGAATATTTTGTTC
GTAAAGAATAGAGCACTTTCACTTTCGTTATTGAGTGGATGTGTGGACGG
CTCGACGGTCATTTTCATCATTTTTCTGGTGAGTCTCTTTATTCAATTAA
TCAACAAAAAAATATCTAGCCCAACAGTCAGTTATTTTCTAGATGATTAG
TAGAGAAAGGAACAGGGCTTTTGCCTAAAAAGACATAATTTTGGCAATAA
TCTTTCCAATTGAATAAGAGATTCCAAAATGGACACGTGTTTTTTCGAAC
GTTTTTTAAGGAAGTCGGGATGTTTTCGGAAAAACAAGGAATTGATATTG
GGAAATATTGGGAAATACACGCATTCAAATGAAATGCGAGCCCTGTAAAC
TTGGAACCTCAATAATTACATCGTTTTTTTTCTGCTGTATCTATTTTGTT
CCAATACAGTTGTCTTTTATCAGTCACTTCCTCCCATAGAAAATGATGGA
TGCATTGGATGCAAAAATGCTCCATTTACCTAAACCTTAAAGTTACTTTG
TTGAATGATTCTTGAAAATATTGGATATATTTTATTTTGGTGTTATGGAC
TATTGTATTGTATGGTATGTTTTTGGTTTTATAAGTTGCATTCGTTGAGG
TAAGCATGCAACGCGAGGGGTAGTTTACTGATGAGCACTCATGTGTCTAT
CTTATAGATATAAATGGGGGTCGGGACTCAGAGTTTGTAAAACAGGCTTT
AGGAAAAGGGCGAAGGGTTTTATTATTTGGTTTTCATTTTTTGTTCAAGG
GATTTGATAAGATAGACACAGAAGTGTTTCAAAAACAACAAAAACGAAAA
AACAAACATTTTCGGAACATTTGGCAAATGAAAAGTAACATTACCCCTCT
CACACAATTTGTTTTGGACTTGGAGCTGGATGGAATTGAAATAAATGGGC
TTGAACTGGAAAGCCTACACACCAAGAATCAAAAGATTTTAAGAGCTTTA
CAAAAAAGTTTTTCAGACGTCAGACGTCTATGATTAGCAAATCTTAAAAA
CCGATGTCGGCTATTATTTATCCGACATGAGCCTTTTGTTGGTAAGTATA
AAAAGCTAATAAAAAATGACCACGACATTATGCATAGTGTGAAGGTCACT
AAGCTAACCCACGTTGTCACAAAAGACCATGGTCCCACTGGGAGAAGAAT
ACTAAATTACAAGTAGGAAGGGGTAAATAGATCCTTTGGCTAAGGGGATT
CTCATCTTAAACCATGGTCTTATCTCCGCCATTTTTTTAATCATTGGATG
ACTTTTACCTTACTTTTTTATCTTTTTAACAGGAAATTTATCAGAAGCAT
ATCACGTTTTCAAGTATTTGTATATCGTATGCTGTTGGCGCATCATGTAT
ATTGATGATTGCAACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAG
CGTTCATTGATGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGAT
GATGAAGATACAGATGATGAAAACCTTGTTGATACAGCATCTTCTCATGT
CATGCGATCTCAAGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGA
TGTACCATGAAGCAATTCACAAGTAAGCTAGCTAAAACTTTATATCAAAT
CAAATTTGTATGACTCAAAAACTGACGTAACAAGTAAAACCAGTTGACTC
CAAAAATGTGACGGGATTTCCCGAAACCACTTAAAGCCGGTCTCCACTTG
CACGCACTGCGATCGCACTTTTTGGCTTCCATCCATTTTTCTTGGAAAAA
AAATACTTCATAAAAATATAGCACGCGCTCGAAAAATTAACCGTCACGTC
AGATTGCACCAATGGAGTTGCTACATTTTTCTTTTGACCAATAGCGTGGA
AGCTTTGCTCGAAAAAGTGCGATCGCAGCGCGCGCAAGTGGAGACCGGCC
TTTATACCAATCGGAAGCTCTCAAAATCGATATAGAGGACTTTTAAGTGA
ATATAGTCGACTTCCCAATCTCGAGAAAATTTAAGTCAGTTTTGACGTCA
TTTCCATTCGATTTACTCGAGTTACGCTCTAGCTGGCAGTAATGTTTTTT
GACAGATTTAATTAGTCACCTATATCTTCTTTGTTTAATAAGCATTGTAC
TAACATCTTCTCTTCATTTGGTATAAAACACTTCAACTATTTTTCTTCAC
TTTTCTTCAGATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACA
TTGTTAGCCAGTCTATCTGAAAATCTGGCTATACAGTTTTCCAATAGAAG
TTACGATGCAAACGATCACAAGATACAGTATTTACCGTAAGTATAGACCT
TTTCATAAATTACGTCACGAATATCACTTGCCTCGTTTTGAAATCATGAC
CATGGTGATTAACTCCCAGCGGATTTTATTAAAACTACCTCCTATTCATA
AAAGAATCGTTTAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTG
AATACGAGGCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTATTCG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAATC
GTTTAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAG
GCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTATTCGGGATAATT
CTTATCAAGTGCCGGATCTAAAGAGAGGTTCAAAATTTATAGCGGTGAGT
GCTTTTGTAAGGGCTATAATCCTTATCCCTAATAAGGAAAAAGTCTTTGT
GATAGACTTTGAACCCCCTCAAATCTGCCACTGTCATCAGTAGAACTAAC
CCACGATCCTAGTTTAACGTTCACATAACGTCAAGGACGCAATCTATGGA
ACTGTTTTCACTTTCCGTCGGCTGTAAATCTTACTGAAGAAACCTGTCAA
TCAGATTGAAATGGCTTATTGGTCCAAGTTGCGTTATTTCAGAAATGTCA
CCCAGATTAGGGTCTTTTTAAGTATGATAGATTTTGCCTAATTATGGTTT
TTTTATTGATTATTTGACATATTTCCTACTAGGAGCCGACCGTACGGTAC
GATTATGGAAGGGTCTGTTGGCTATCAACAAGATTCTTATTCTGCGTCAT
CACACCTTGTATTCAACATAAAAAACAATAAGGAGGACGAAAAGACGCTC
CTGTTACCAATTCAACCTACCAGGGAAGAGCACCTGACCCCCTACTCAGG
TAAAAGCTGTTTTTCTTTCAGCGTTTATCTTAAATACACGTTTTTTTTTA
TAAGAACAAACTATATAAGAACATAAGGCTTCGATGGCCAAATTCTTAAG
AACAAGTCAAGAACATTTTAAGCTTTCGTGGGCTCTAGAACACCCAATTT
TTTTGGAAAATGGTCAAAAATACTAAAAAAATAGCGAAAATAAGAACATG
TTTAGAACATTTTTAGGCCTGAAAGTAAAAAGTTTAAGAACATCCGAAGG
TTTCAAAAACTTTTGATGTTCTTATGAAAAAAAACGTGTACCATTAGTTT
GGCTGACGTTTTAGTAGCTTAACTCAAGCTAATCTACACTAAATGAAGAT
TTTTATTTGGATAGAAATCTTTTTTCAACTATCTTTTTAGGTATTTACTT
GAATTTGTTTCATTGATATGATTCTCAAGTTTCGGCTAGATGAATTGTGA
ATTTTATGGCTGACTTTTTTCATTTTTCTGTATTTGAAGGACATAAACTA
CGGCAATACATCTTTTCGAAGTTGATGATCTTTGGCACATACACAGCTAG
TGTGATGATGTTCAAGATTGTTTATTTCATCGGAAATTTGGACAAATATC
TTAACAAATTGACCGATACTGAGACAGGTAACCTTTGTTTCACTAATTTA
TAGGATACATGTTTTTCCTTTTATAAACTCAATCGGCTTGTTCCTAATTT
TGTCAGCTTGTTAAAGTATATACACTTTGATTTAATTATTTCCATCTTTT
AGAATGCTAATCTACTACTGTAATATCGCTTAAAAAAACAATTTCTTCGA
GAGACTTTTTTGTCTAACACAGTCCATACCCTGACCCTACTGCATAAAAA
GACGTATGACTACAAAAATATTACCTTCGCTTGAGCCCCTTAGCAATAAA
TAAAATTACTAGAGTTTGTAAGCTTCGTCGCGAACCAACATTATCCAATA
AGACTCGTAACTCACAACCATAGGGCATAGCATTGGCGGACAATAGCTTT
TACCCCCCGGACAAGCATCTGCTGACCCCCCGGACACCCCAAATTACCCC
CGGACAAGGCAAATTTTGATGATTTTTTGCTACCCCCCGGACAAAATATC
CTCCACCCCCCATGTACAATTTTTTTCTGGAAGAGCCCAATAGTAATTCA
TGTGTTTTCCCACTCTCTCATAGCAANCATAGCATTGGCGGACAATAGTA
ATTCATATGTTTTCCCACTCTCTCATAGCAACTTTGTATATCAAATATTT
TGGATATGTTCAGTTCGGTGGAATTATCGCTGCACCGATCTGCAGTATGT
TATTTCGTGAGAATGTGGGAACCGAAAGATTATCTGCTCATCAAGATTTC
GTTAAAAAAGTCAAAATTTTAATCCTTCCTGGTTTTCTTCTCATCTTGTT
CATCGTGCTTATCGATGTCTTACAACTCGTTCAAAACATTTATCTATCGG
TAAGCTGTTACAACTTTTTTATAAAAACTATTTGGGGGGAGGGGTACTAC
CTTGCCGACCGACGGTGTGTCCGCTGAAGTTAAAAAAATGGACCCTACAT
TGGACTCGTTTTTTTTTACATTTTGCCAAAGTTTTCGAAAAAGTGCCCTT
GAATGGGATTAAAATTTCGACCATACTTGGGACTCATTGAGGTGAAAAAG
GTATCCTGACCAGTACATCCCCGTACCCCTTTTTGCCCAAGTACCCCCGG
GGAACTATTTCTTATAATTCAGTCAAAACTTATAAACAAATCATAGACAA
TTGAACCCTTCATAACTTCATAGACCTTAAGTGTGAAGAAACTAAGCATA
AGTCACTTTTTCGAAAGAGATCCTTGACATTAGGGGTATGTTTTCCATTT
AAAAACTTCAATTTTCCTGTTATCGATAACTATTCCTAGATTCTTCAAGT
GAAATAAACTTCTTTTTTTCAGGTTCCAATTTTCATTCTGTTTTTGTTTG
GGAACAGTTTGGTGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTAA
GTAGTTCCCCTTTGAATTACAGTGGAGTTTTCATAACTCAAACTTTTATA
ACTCGAAAGACTCCTTAACTCGAACAATGCCTTATAAACTAAGCTCCGTA
ACTCGAACTTCCTTAACTTGACAAAAATTGTATTCCTTGTGCGTATTCGA
GTTACGAAAACTTCACTAGGTTTCAATCCTGTTAGAAGTTGCCTCGGAAG
TAAACCCACCTAAAACACATCCCAAACCAGCTGTCACTCCCTCCAGGACC
TAATAAACTAGAGAAATCAGTCTTTAAAACCACTGTAAAACACCAAAGAC
CCTTAAAAAGGTACATTGATTGACGGTTATTATATTGTAACGCTTTTTTC
TTCGTATTTCAGGTTTCCGGCCAAGTACTACTGCACCTTGTATGGCATCG
CAACGGGAGTATCTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCT
CTTGAAAATTCTCTTTTCCACGGAGAACAATTCTATGTAAGTCTTCAAAA
CCAAAAACTCGAACCCAGTCCCTTAGTTTTCTTTTCATGACTCCAAAAGT
TTCATATCAAGTCCATCAATAAAATCAAAAAAAAGTTTTACCCTAATAAT
CGTCTACTATATTGAAATATTAACAAAGGGCAATTCTTTTTGAGGAAAAT
CTCAACCCTTAGTTTAGAATATAAATGCTAAGGTGAATGTATGTAACTTT
GGTAAAATCCAATGGGAGGATATTAAGGGAAGCATCCAGTATTAATTGAT
TTTGGCATAACAATGAAAACTTTATAATAATTACAGTTAACTCTCGCTAA
TTCGAACTCGATCCTCAACTCTAATTTATTCGAATTCAAGAGAGATTCGA
ATTATAGAGAGTAAGTTTCTCCTTGACGGTAACTGACAAAAAGTTCGAAT
TATAGAAAGATTTCGAATATAGAAGTTCGAATTGGCGAGAGTCTATTGTA
GTTTTAAAAGCATATATAATTTTTCTTCTCTATATAGACGAACCTTCTCA
TGTTGGGATTACTTATATCAACACTGGTGCTTCCATTCTACTTGGTGTAT
TTCTACAAAAAATTGAAAATGGCGGAAATTGAAACTCAAGAAAAACCTTG
ACAAGTCTGATATGAATTTCAAGATGTATTTGTTAAGTTGTTAAAACTTG
TGAAATTATTTTTTGGCTTAAACTAGTTCCTGGTTATTTGATCAAAAAGT
TTTGTGTATATGAAATGTGAGTATATTGAACTGTACTCATGATAGTTTAA
AAAGATTTTGGCGGATATTTTTATTCGCGAGTTTTAAGATTTTAACATTC
AAAAGCTGATTTGACTTATTCCTGAGTTAATTATTTGTGACCTAATTACC
TTTTACAGGAGAAGTATGAAATCGATTGTTTCCCCGATTTTAATGTTTTC
ATTTATTTTCGAAACCTACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033388XLOC_033388Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052850-exon-scaffold_220-1575043694:189452..190049TCONS_00052850-exon-scaffold_220-1575043694:189452..190049Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:188535..188581TCONS_00052850-exon-scaffold_220-1575043694:188535..188581Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:187313..187389TCONS_00052850-exon-scaffold_220-1575043694:187313..187389Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:186822..186917TCONS_00052850-exon-scaffold_220-1575043694:186822..186917Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:186301..186460TCONS_00052850-exon-scaffold_220-1575043694:186301..186460Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:185328..185617TCONS_00052850-exon-scaffold_220-1575043694:185328..185617Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:184614..184739TCONS_00052850-exon-scaffold_220-1575043694:184614..184739Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:181751..181917TCONS_00052850-exon-scaffold_220-1575043694:181751..181917Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:181123..181260TCONS_00052850-exon-scaffold_220-1575043694:181123..181260Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:180301..180521TCONS_00052850-exon-scaffold_220-1575043694:180301..180521Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:179754..179827TCONS_00052850-exon-scaffold_220-1575043694:179754..179827Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:179264..179387TCONS_00052850-exon-scaffold_220-1575043694:179264..179387Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1575043694:178327..178762TCONS_00052850-exon-scaffold_220-1575043694:178327..178762Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:189452..190049TCONS_00052850-exon-scaffold_220-1510915933:189452..190049Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:188535..188581TCONS_00052850-exon-scaffold_220-1510915933:188535..188581Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:187313..187389TCONS_00052850-exon-scaffold_220-1510915933:187313..187389Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:186822..186917TCONS_00052850-exon-scaffold_220-1510915933:186822..186917Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:186301..186460TCONS_00052850-exon-scaffold_220-1510915933:186301..186460Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:185328..185617TCONS_00052850-exon-scaffold_220-1510915933:185328..185617Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:184614..184739TCONS_00052850-exon-scaffold_220-1510915933:184614..184739Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:181751..181917TCONS_00052850-exon-scaffold_220-1510915933:181751..181917Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:181123..181260TCONS_00052850-exon-scaffold_220-1510915933:181123..181260Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:180301..180521TCONS_00052850-exon-scaffold_220-1510915933:180301..180521Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:179754..179827TCONS_00052850-exon-scaffold_220-1510915933:179754..179827Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:179264..179387TCONS_00052850-exon-scaffold_220-1510915933:179264..179387Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1510915933:178327..178762TCONS_00052850-exon-scaffold_220-1510915933:178327..178762Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:189452..190049TCONS_00052850-exon-scaffold_220-1491911889:189452..190049Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:188535..188581TCONS_00052850-exon-scaffold_220-1491911889:188535..188581Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:187313..187389TCONS_00052850-exon-scaffold_220-1491911889:187313..187389Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:186822..186917TCONS_00052850-exon-scaffold_220-1491911889:186822..186917Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:186301..186460TCONS_00052850-exon-scaffold_220-1491911889:186301..186460Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:185328..185617TCONS_00052850-exon-scaffold_220-1491911889:185328..185617Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:184614..184739TCONS_00052850-exon-scaffold_220-1491911889:184614..184739Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:181751..181917TCONS_00052850-exon-scaffold_220-1491911889:181751..181917Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:181123..181260TCONS_00052850-exon-scaffold_220-1491911889:181123..181260Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:180301..180521TCONS_00052850-exon-scaffold_220-1491911889:180301..180521Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:179754..179827TCONS_00052850-exon-scaffold_220-1491911889:179754..179827Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:179264..179387TCONS_00052850-exon-scaffold_220-1491911889:179264..179387Clytia hemisphaericaexon
TCONS_00052850-exon-scaffold_220-1491911889:178327..178762TCONS_00052850-exon-scaffold_220-1491911889:178327..178762Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:178327..190049 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	5.08857e-06	0	0.0306803	9.04294e-09	0	5.68589e-10	0.0047634	0	0	0	0	0	0	0	0.277736	0.384266	0.00701678	0.0713246	0	0	0	0	0.304215	0.941234
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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