TCONS_00052864 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052864
Unique NameTCONS_00052864
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2412

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052864 ID=TCONS_00052864|Name=TCONS_00052864|organism=Clytia hemisphaerica|type=transcript|length=2412bp
AGGCACGTTAGTTCTAATTAGGAATATTAAAGCCCGTGCTACATTATAAA
TGTTTATCTGCTACTGTGTAGATAGGGCAATATTTACACCCGCGTTTTAT
ACGCGTTTTTGTCACGGgtaatagaacatttttctAAATGTCATAACTCA
AGACTCCATCCATATTACtgtatcaaactttcaaaatctgctctacACAC
TAAATTCTTTCATTGGAGGCTGATAAGAATCTgtggaaatttgtattttt
ggaaaaaaactggaaattcgatatatattcttaattaggattgaaaaaca
aagcgataatcctaattaagaaagtCTGTGCGATCTGGtgcgatcgaaaa
aaatatgcttaattAGGATAGAACTCCTGACTGACAGTGTCTACAGGTCA
ATAGCAGAGACCTATTGTTTGGCTAGCAAATCCCATCTTCCTCACTCACA
TGGTTGATATTATTACCGAAGATGACTGATGATCAGATAGTCATAAAGTA
TGAAGAATCCTttaccaacaacaataacaacctGAACAATGAAGGTTCTT
CATCACAATCAGAGCGGTCACCCTCGTCACCTTTAGGCTTGTCAGAACTA
GAGAGTTCAACAACATTGGGCAACATAGCTCAAAATGTGAACCCTAATGA
CAAAATGGCCATCTACCAACATCCATTGTTTCCACTTTTACGCTTGCTTT
TTGAAAAGTGTGAATCTGCAACCAAGTCTATTGACAATGCTGACTCTCTC
TGTTTTGAAGCTGAGATGAAAGCCTACATCACGGAAATGGCAAAAGTCAA
CAAACCTTTCTTCACAGATAATGTTgaagttgacactttgATGCTGAAAT
CACTTCAAGTCTTGGCTATCCACCTTCTGGAACTTGGAAAAGTGAATGAA
TTATGCAAGGACTTTTGTACAAGATACATATCGTGCTTAAAAGGAAAGTT
GAACAGTGAAAATATTATGAGAACATTAGACATTCAAAACACACCACCTG
GCTCACCTACTTCTCCTAAGAATCCCACACAACCTATGTCAGACGTCACA
ATGGTTGGATCTACAATTGATGCTTCTATTCTAGCTCCACCAAAAACACC
AACAGCTGTCCCAGTAAATGGTCGAAGCTCTTCAACTTCATCTTTAGAAA
ATAACAACACTACTTTGAAAGAAGACTTCTCGATTCATCGCTCAATGTCT
GTTGACACTCCAAGTTTTATTGGTGCAGCTGGATTGGCAACACCAATGTC
GCCTGAACAACTGACAGGCTTTCTTACCAAGAAGAACAAGGGTGGTAAAA
GGGGAACACTTCCAAAAGTAGCAACAAATGTACTGAAAGCATGGCTGTTC
CAACACTTAGTTCATCCCTATCCATCTGAGGAAGAGAAGAAGCAACTAGC
AgtacaaaccaacctttccatattaCAAGTCAATAATTGGTTCATCAATG
CACGTCGCCGTATTATTCAACCCATGCTTGATTCCTCCAGCACTGTCTTG
AAGAACAACAAAAAACCTAAACAACCACGGAACGCAGCTCAAAAGGGCTG
GGCAAGCACCATGGAAGAACTTAGCACAACCAATAGACCTGGCCCTTTAA
GTCCTCCAGCTCAACAACCTGTACGATACATGATGAGTCCTGTCACTTCT
TCGGCACCTGGTCCAGTCTTACTTAACCTTGGAGCACaatcgacaaacca
accttccACAACACAATCCATGTTAATGAGTCCGGTACAGTTTGTTCAAG
TCAACCAGATCCCTTCTATGCAGAGCATACAGGCTGCTACAGGCTACCTA
CCACCTCACACTGCCAGCACACAAACCTCATTCCCCTCTACCACTAATGC
TAATTCAGTAGAAACCTCTTCTAAGGATACATGAGATTGTTTCATTGGTG
GAAACTTTTCATTAtggaaaaaaaacgaaaaatgaaagatttttttatat
gttttgtgGTAGTTTATCCTGTTTTAATATAGTGTTTATTAtttgctttg
tatttttgatgtctttatttttatttttttgtgtccCTTTAATGTTAACG
GTAGTTTGGCTAACGCTTCAGGTTGACAGACCAGATTTGAAAACACAGTA
GGTATCATATCTccttatgcttataaaaatagaTTAGGGTGTCCTCACAC
TTTGAATGTCCTATCTAACATTTTTTGAAGGTAGCAAATATAAAGTTCTa
ttaggcttttccagaaaaaaattaaatatcagGGGTGAAGGATATAACAT
CTTTTATAAATTTACCCCTCGGACATTGTGAATTATGACCCCGAACAAGC
AtaagttgaccccctggacattaaAAATAACCCTTAAACCGAGCAAAATT
AatcccaaacagagcaagtttaccccctggacagGGCAAGTTTTGTAGAT
CCTTCACTACCC
Run BLAST on NCBI

protein sequence of TCONS_00052864-protein

>TCONS_00052864-protein ID=TCONS_00052864-protein|Name=TCONS_00052864-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
MTDDQIVIKYEESFTNNNNNLNNEGSSSQSERSPSSPLGLSELESSTTLG
NIAQNVNPNDKMAIYQHPLFPLLRLLFEKCESATKSIDNADSLCFEAEMK
AYITEMAKVNKPFFTDNVEVDTLMLKSLQVLAIHLLELGKVNELCKDFCT
RYISCLKGKLNSENIMRTLDIQNTPPGSPTSPKNPTQPMSDVTMVGSTID
ASILAPPKTPTAVPVNGRSSSTSSLENNNTTLKEDFSIHRSMSVDTPSFI
GAAGLATPMSPEQLTGFLTKKNKGGKRGTLPKVATNVLKAWLFQHLVHPY
PSEEEKKQLAVQTNLSILQVNNWFINARRRIIQPMLDSSSTVLKNNKKPK
QPRNAAQKGWASTMEELSTTNRPGPLSPPAQQPVRYMMSPVTSSAPGPVL
LNLGAQSTNQPSTTQSMLMSPVQFVQVNQIPSMQSIQAATGYLPPHTAST
QTSFPSTTNANSVETSSKDT
Run BLAST on NCBI

transcript from alignment at scaffold_220:477673..489195-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052864 ID=TCONS_00052864|Name=TCONS_00052864|organism=Clytia hemisphaerica|type=transcript|length=11523bp|location=Sequence derived from alignment at scaffold_220:477673..489195- (Clytia hemisphaerica)
AGGCACGTTAGTTCTAATTAGGAATATTAAAGCCCGTGCTACATTATAAA
TGTTTATCTGCTACTGTGTAGATAGGGCAATATTTACACCCGCGTTTTAT
ACGCGTTTTTGTCACGGGTAATAGAACATTTTTCTAAATGTCATAACTCA
AGACTCCATCCATATTACTGTATCAAACTTTCAAAATCTGCTCTACACAC
TAAATTCTTTCATTGGAGGCTGATAAGAATCTGTGGAAATTTGTATTTTT
GGAAAAAAACTGGAAATTCGATATATATTCTTAATTAGGATTGAAAAACA
AAGCGATAATCCTAATTAAGAAAGTCTGTGCGATCTGGTGCGATCGAAAA
AAATATGCTTAATTAGGATAGAACTCCTGACTGACAGTGTCTACAGGTCA
ATAGCAGAGGTGCCAACTTTCACGCTTTCCCTTTATCTTATGCACAAGTG
TTTCAACCAGTATTCCAACGAAGCCATATTTTGGTTTGTATATACAGAAA
TTTCGCCCGCTCAAATCAAAACAACAAAATTGTCAAACTCACTAAAGCAA
AACATTTCCACCACAGCATTTCCCAGGATAAAAATTCTGGTCACATGACC
ATCCGTGATTTTAGACCAATGAAAACGCTTCATTTCCCCGGATTAAAGTT
GTGTCTACACTAACACGCGGGAACTAGCTAGAAAGAGAGAGAAAAAACCA
GGGGTCAAATTAAATTGTTCTCCCTTCTTGTGGCAAACATAAAAGACTTT
AAGAGCCCATTTATTTAAGAAAGGGGTGTTACATCATAAATAAATTATGT
AAGTAAGTGATATTTTAAGTAATAAGTTCATTAACAATTTTATTTTGAAG
TTTGTTTTTAAAAACGAAACCCCTGTGCTAGAAGATGATAATTTCATTTT
CTTAACTTATGGCCCATTTGGAAGTATTTGTAATACAGATCATTTGGCAG
TGTAGTTGCAGCCTATACAAGAATTGGATCTAAAGTCTGAAGTCGTAACT
CCTTGCCAGTGACCCCACAGAGAAATTTTTAGTTGGCAGACACTAACTTT
AGGTTGGTTTTGAAATCGTTTTATTTTGAAATGTAATCTTCACTTTAGAT
GAATACTTTTACAGGGTGTCTACGGGACCTTGAAAACCTTGAAAATGAAC
CACCCAACCTTGAAAACCTTGAAACAGGGATTTTTTCAAGCACTTTGAGC
TACTACCGTTTTTGTATAATTAGATTGAGTTTCAGAAGCGTCACAAAACG
CGAGCGAAGCGGGGGTTCTAGGGGGCGGGGTCCGCTAAGAAAATTTTTTA
ATCCAAATTTGGCCCAGGATTGCTTTAAACAAGAACAAAACGTGAATACA
TTAACACCGCTTAAGTAAAAATAGAAAGATTCTGGCCCATTTTACGCCGG
TCCTTTTAACGCCGGTCCTTTTAACGTCGGCCCTTAAACATGACGCCACG
CACGAGCCCAAAAATAACGCCAATAAGGGCTGGCGTAAAAAGGGCCGACT
AGGTAGAAAAGAGTTGTGGCAAAAGCGAAAGAAGGAATAACAACAAATCT
GTTTTTTTATGAAAAAATCTACAAAAGAATTTATAAGTAATAATGAGGAT
TCTCTTAAAAATTCATTTCAACAAGAACAAATCTCACATACACCTGCATA
CACCCCTGTCTCTTACTCTATCCTTTATCGAATTATGCGTGTTTCAAAGA
TCACTTTTATCAAATCGCTTTCTTCGTAACTTTTAAGAGTGTTTCAAAGA
TCACTTTTATCAAACTGCTTTCTTCGTAACTTTTAAGAGTGTTTCAAAGA
TCACTTTTATCGAATCGCTTTTTTCAAAACTTTTAAGAGTGTTTCTATGA
TCACTTTTATCAAATCGCTTCTTCGTAACTTAAGAGTGTTTCTAGGATCG
CTTTAATCAAATCGCTTTTTCGTAATTTTTCGTAACTTTTATGAGTGTAT
CTAAGATCACTTTAATCAAATCGCTTTTTGTAACTTTTAAGAGTGTTTCT
AAGATCACTTTTATCAAATCGCTTTATTCTTTGTAACTTTTAAGAGTGTT
TCTAAGCTCACTTTTTCCAAACTAACCACTTTCTCTATTACTGTAGCGAG
TATTATCCCAAGGTCACTCTTATCTATAGCTTTACGTGTAACTTTCAAAA
GCTAGCTTCTTAATGAGGTTAGAAAATATATTCTGCTAGTTGAAAAATTC
CGACGAATGAATGANAACGAGGTTAGAAAATATATTCAGCTAGTTGAAAA
ATTCCGACGAATGAATGACCGAGAGGATTTTAAGTTTTATCGACTGGATT
TGATTTCAGTCGGACATAATGTCCGATTGCAGTCCTGCATTGTCGAAAAT
GATAATAAAGAATTTCAATGAGTGGGACAGGGGTATCTATACCAAACTTC
ATTTTTTATTAGGTTATTCTAATACAGGTTTTCTCTAAAAGATTATTCGT
GATAGGACAGGGGTATCTTCAAAGTTTTTCTTTTAACTCTAAATAAATAG
TCTGATTTTTTTTTTCAAATGTTTTGACTTTCTAGACGGAATGAAGATTT
GATTTGAAAAGAAAAGTTCCTAAAGTTTCCTTATACCTCATCGACCCCGA
ATAGTTTTTTAAAGCAATTTTGCCGTAAATCTGTAATGACTTTTATTTCA
ATTTTGACCCCTTCTAAAAAGTTATCATTTTGAAAAAAACTTTAATGAAA
GAAGTAACTCAATAAGTAAATTCATTCCCTGTTCCAAAAATCCAAGTAAA
TGCGAAATAAATGTTCTTAGAAAACTTTTCCCATTAAAATCCATTTGTTG
CGTATGTTAATTCATATCTCAAGTTTTCGTAAGCGTTCTTCACAAACGGT
TTTCTTTTTAGACCGTTCGTCACAAACTGGTTAAAAAGCATAAGCGTTCG
TCGCGAACAGTTTCAATAAAACTTTTTTGTAGAGCGTTCGCGAAGGATGC
AAAAGCATTCCATTCGTTGCGAACGGTTAACCCCTTCGTCACGAATGGAA
AGGCGTTCGTGTGTCCGAATCGAACGGTTTCTGACCCAGTAGTGTTGTCT
CTACTCTATACTGATTAAAAACAAACAATTGGCGTTTCTGAGAAAACTGC
TTTGGAACTTTTTTTTTGTAATTTTTTTTGTAATTTTTTTTTTATATTTC
GGATTGAGTTTCATAACTCAATCTTGGATTGAGTATTTTTGCCGGTATAC
GGTAGTAAAAAAGTGCTTAGAAAAATCCCTGCTTGAAATCTATCAATTTT
CTGGGAAAAACCTTGAAAACCACTATCCAGTCATTCGAAAAGTAAGAATA
AGTAAAAAATCGTCTGCGGCGCTAAACCTTTATAACATTTAGAGAATTCC
ATATTTCCCTGTTTCTGTTGCGATTCTGTTGCAACGAATGCAACATATTC
TTTTATCATTAGCTGAGTTTTTGTCACTAATTTTCCTATGTATGAGCNGT
TGCAACGAATGCAACATATTCTTTTATCATTAGCTGAGTTTTTGTTTTGA
GTTTTTAATTTTCCTATGTATGAGCCCTAAGAAATTGGCTGTTCCCCAAT
TTTTAAATCGCTTCACGGGCGTCTTGGAATAATGGCTGTTCATCAATAAA
ATTTCAAGGATTCCTTTAAAAACAACTCTTTTGGCAATTGATTTTTGTAA
AAAACAAAATCAAAAACAAGGCGTTTTTTAGCCATTTGAAAGAGTCAAAA
TCAAAATTTTCTCTCGGCGGCGCTAACCATGGTTGCGCCTCCTCGGTCAC
TGTAAACAATTGGTTTTGCTTCTAATTCTTTATTTCTACAGTTGGAAGAC
TAGGGAGCTGAAGTATTTCTTTTTGTGCTATTGTTCTCGAGAGGGAGATA
GGAGTTTAACTGTGGAAGAAATTCCCCGGGCACCAAAAGCGAATAAATTT
TATTTGCTGTCCTCTATTTTTCTTCCACCTACCACACTGAAAAAAAAATT
CCTGTAAAGACCAATATCAACTGAGTATCAAAAAACCTTGAAAAGTGCCA
AAGTTTTTGCCAAAAAACCTTGAAAAACCACTTAAAATGACCAAAAAAAC
CTTGAAAACCTTGAAAATTCCGGAAAAAAATCCGTAGACACCCTGTTTTA
TTTATTTGGATTCATGAAAGGCTCAAGGTTTGTTTACTTTTTATTTCAAA
TTATTTCATTGATTATTGAGCTGCAATCAGGGGGGGGCACGCAGTTACTA
CAAGACATGATGTGTAGTAAGTGCTTTTTCAACACTTTTTTTCAGGACCA
CCACCCTTTGCAGTTACTACACCTTGGTAGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATTAGGGAAAGCATAATTT
CAAAGTTGGGTCTGAGAAAAATTTCATTTCAATTTTTTTTCGTCCATTTA
TAACAAAAATATTTTTTTTATAAAGAATTTTTTCACAAAAAAATTCATTT
TTTGTGAAAAATTTTGAAAGTTCTTTAAAAAGAATTAAAATATAAGCACT
TACTACACCAAAAGTGCTTGCTTTAGTGTTTGGCACCACCCCTAAACAGC
AGTTACTACACTGTGTAGTAACTGTTTTCATAACTTCTGAATACAGTACC
ACCACGGTAGTAAGTGTCATACTGTCTTGTAGTAACTGCGTGCCCCCCCC
TGCTGCAATAGCTGATTGAAAAACGAAGATTTTTTATAGTTATCAGCGTG
GGCTTGGCCACCATTTTGAATTTAGATTTTTTTCTCCTGTACTCAGCAAT
TTAGAGGTTGTTCGTAATACGCGATTTGGCTTACGCGTAACACTTGTGCA
TGCAATTTTTGAACAATTTGATTTCTCATGTACCGTAGAATCGTCTAATA
TTGACATGCGTCTTCTAAAGTCGACACCGGATCTGTAAAATAATCAAAAC
AAACCTTGAATGAAATTCTTGGTATCATTCTTATCAAACAAGTTCATCCA
TCAAACTAGAAGTTCAATATACATTGCAATCCTTTCGCATAAAAAAACAG
CCAAATTATAAGCAGTTTTACACCAGTTTTCCGTCATCCATTTTTGAAGG
AAACTGCCAGCTAGCCAGCAGCCCAAAAGGCAAAACAACTGCGTGTTATG
GGTGGTTTCAAATTATGACCTTTGAACACTGTCAGTGTACATATACTTAA
ACTTGTATATCAAGATTACCGGATTTCGAGTATGCGCTAATTTTACTTTC
GTTTTGAGTGGTTTCATTTTCGATTTCAAGTCAATATCTTAGCAATGGGG
TGCGCTCGCCCATAGTTACAGGGGTTTGTGCAAAAAACTAAACATAGAAA
GATTTCCAAATCACCCATCGATTAATGCAATGAAAAATGAAACTTTTCTA
TGTTTCACATTTTTGCACCTATTCTTCAAAATGAAAATATTTAAGATTTT
AATTTCTTCTTTTATTTAATGATTTTTTTTACGGCACTTTGTTGACAATC
TAACTCTCGCATCAAATTCCCGCTTTCTTCATTAAATTGAAGATGAGAAA
AAACCTAAGTCACGGATCACCGATTGAAACAAATATATGAAGTGCGGGAT
TTTACAGCCGACCGTCGTGCAAGGCACTGAGAGGCCACTGGTGCCAAAAA
GAAGGGCCATTTGAAATGCGACAACCTCACTGGTGGAAATTTGATAAACA
GCTGCAAAGGAGTGCTAGGAAGCAGTAGAAGAGACCACTTTCATTCTTTG
TTGCAGATTTCGATATAAACTTCTCTCAGGGATTACTTGTCAATGTACAT
GTACACATGTGTTGTGTCAACTTGTCAGCATTGTATTGTTGTAAAGGGAA
AGATAAAAGAGGTATATAAGACTAGCCTAGTTTCTAATCCTGATATAGGA
GTTGAAGTTTTGAGCTTGAGAGTCACAATATAAATTTGTAAAGAAGGCCA
GACATTTGTACCCTGAGACCTGAACTTTGTATGGGTATCAGTAGGGTTAG
GAGCTTTGTCAATTAAGGTCTGTAAATTACACACTACAAGTATTTGTGAA
TGGCATTCTGGTGTGTCTCAATGGCGCAATCGGTTAGGCATTGGGTTTGT
AAACCAAGGTTTCTTGCATTTGGTGGTTCGAGCTGAGGTAGGAGAGTTAT
TTCACCGGGATGGGTAAATTTCAGAAAAAAATATATTTTTGGTAAAACAT
TTTCAGGGTGCTATAATATCATGAATAGAAAGAACATACTTAAATTTGAG
AGGATTTTGTTCAACAGAACTTAAGAAAAGTTTAAAAAACCAACTTTCCC
TTAGAAAACGCAGGCAAAAACAGATTTGTTTACCTCCGGAGACCAAACAG
TGGAGAGCAACAAAATAATGCGCACACATCTGTTTTGCAAATTATGGGAA
AGATGTATTCCCCCAGATTTCCCATGGTTTTTCGAATTTCGGAAATCAGG
CCAAGGTTTCAGATTTTGCTTTGAAATGTTTATCTCACGCATAATGAACA
TCTCAAGTTCGCAGGTCTGTAGTCATATATTGGCATATTTCAATATTTTC
ATGACTGCCTGTGATTGTCGGGTTTTTCTTGTGTGATTGCGATGGTTGTG
ATTCCAAAATTTCTACAATGTTTCAATGTGATCAAGATTCGAAATGATGT
GTTAAAGGTTTAGAAATGGAGGGGTGTTGTGTGACTTGGGCTAATTTAGG
CTTAATTCGTATGTTGAACAAAAGTTTTTCATAGTTTTGTGTTATCTCAT
GATCTAATTTTTGGAGAATTTAACATTGTACATAATCTTGATAATAAATT
GCATGCATTTTTATGTATTTTTAATTTATAATTTTTAATGAGAGAATTAT
GCCTTACATCAGCAAAGGATGTGCAGCCATCTTAAAAATCAACATATACT
GGTATATTGTTTTGGACAAAAAAGTACTGCAAGAGCTCCTAAATCTGTAA
ACAAATTCTTTATCCGGAATAGCAATATACCCGATGGTTTCTTCCAAAGA
TACTAACTAAAATAAAACAAACCTTTCACTGTGACGCAATGCAAACAAAG
ATACCAAAGTGGAAACTAAGCTATGTTTTGAGTTATATACATACAAAAAC
AACTTTTTAAACTTTCAATCTTTTTCTCTGTGGGAATAGATGGTAACAGT
CTATTTCTAGTGTTTTTTCTTTATTTTCAAATATATTATCTGCAATGTTA
GTGGTGGGTCAAAGGTTTGGCAACTTTTTCCAGCAAATAGTGCTTCTCAG
CTAGTTTTTAGTATCCTCTGCAGTAGGTTTTATGTTTTAATTTGTTTTTA
TACTTCTGAGCACGTTTAAATTATTCAAAGAAACACATTTATTTTTACAA
CGTTATCTGTGGTGATGGCTGATCAAAATTGCTAAGCCTACCTACATTAC
CCTCTTGACATCATTTGAGATGATATTTTCGTAGATGGCAGAAATCTTAT
GTAGGTTGAAAACTGAATTGAATTGAATAACCATGAAGAACAGAGTTTGT
GTTTTCTTTGAATATATTTAATTGACTCATATTGAGTCAGTTTATTTGTG
TTTACTTTTACTCACATTGAGTTGCCTTTTTCCTGTTGGTGGTTTTAGAT
CATGTCGTGCATTTTTGCTTTCAAGATACTTTGACTATATATATACAGTA
CAAAACTACCATTTCCTTTATTATGTACAATGAAAGTTTCATTAACACTG
ACAACAGCCACAGCATCATCAAAATTGTTTATATGTTTTGATTTTTGCAT
GTGAATGAAAATACAAAAGACTGAGAACAAGCATAGCCATTTTTAAACTT
TACGTAATTATAATATTATATAAGTCCCAGGGAGGGTATTCTTTTTCTAA
ATCAGCTTACTTTGACCTGCTTTGACGAGGTTTTTTCCACGTAGTTGTAA
GCTTTTCTCAAAAGAAATCATGTAACTAAAATCACTCAACATATTTAAAA
CTATAACATAGAAGTGTAAAGGTTAACATTCTCGACTTATGTACAGGTGG
CTTGGCAAGTTGATGATTTGCCCCGGTTGACCCGTACCATGCAAGGGGAA
CTGGGTGTCAATACACTGTTACACAAGAGTGTTCAGAATTATGTCATACA
TTGTATCTGCTTTGGTGATGTTGCTCACATTTTATGAGACTGGCAAGAGC
AATCATCCCCCCCCCCAATTCAAGTGATGTCAAATTTTCTCACAAACCCC
CCTGGATGTTTGAATATTTTATAAAAGCTATTGCTTAGAATTTCAAAATT
TGTCTTTATATGCCTGACAGAAAATGCAAAATTTATTTCAAAAAAAGTTG
CTGCTTTTTTCATGAAAATTTTTTCTATTATAGAATTTTTGTTTTCATTC
TTAGACCTATTGTTTGGCTAGCAAATCCCATCTTCCTCACTCACATGGTT
GATATTATTACCGAAGATGACTGATGATCAGATAGTCATAAAGTATGAAG
AATCCTTTACCAACAACAATAACAACCTGAACAATGAAGGTTCTTCATCA
CAATCAGAGCGGTCACCCTCGTCACCTTTAGGCTTGTCAGAACTAGAGAG
TTCAACAACATTGGGCAACATAGCTCAAAATGTGAACCCTAATGACAAAA
TGGCCATCTACCAACATCCATTGTTTCCACTTTTACGCTTGCTTTTTGAA
AAGTGTGAATCTGCAACCAAGTCTATTGACAATGCTGACTCTCTCTGTTT
TGAAGCTGAGATGAAAGCCTACATCACGGAAATGGCAAAAGTCAACAAAC
CTTTCTTCACAGATAATGTTGAAGTTGACACTTTGGTAAGATTCTTCTTC
CCCTTTTATCATATTACTTACTGTTTTGTTTTTTTTCTTACAAAAGCTTT
ACTCCATTTTCAAGCATTCCCAAAATGAATAGATAATTTTGGTAAAGGTA
GTGCATAAGTTAGGTAATAAGAGGACGCCTTCCTAACAAGTTCAGATCAA
AGAGATCTAGAGTAATTGCTTTCAGAAAAAACTTACAAGGGATTTGATAG
CAATGCCTAAAATGTCCAATATGAAAATACATAAAAAATATTGATAGTAT
ATCATCTATAGAATGAATACCTTTATTCCTTTGATCATAGATGCTGAAAT
CACTTCAAGTCTTGGCTATCCACCTTCTGGAACTTGGAAAAGTGAATGAA
TTATGCAAGGACTTTTGTACAAGATACATATCGTGCTTAAAAGGAAAGTT
GAACAGTGAAAATATTATGAGAACATTAGACATTCAAAACACACCACCTG
GCTCACCTACTTCTCCTAAGAATCCCACACAACCTATGTCAGACGTCACA
ATGGTTGGATCTACAATTGATGCTTCTATTCTAGCTCCACCAAAAACACC
AACAGCTGTCCCAGTAAATGGTCGAAGCTCTTCAACTTCATCTTTAGAAA
ATAACAACACTACTTTGAAAGAAGACTTCTCGATTCATCGCTCAATGTCT
GTTGACACTCCAAGTTTTATTGGTGCAGCTGGATTGGCAACACCAATGTC
GCCTGAACAACTGACAGGCTTTCTTACCAAGAAGAACAAGGGTGGTAAAA
GGGGAACACTTCCAAAAGTAGCAACAAATGTACTGAAAGCATGGCTGTTC
CAACACTTAGTTGTATGTGACTTTCTTTTTAAAACTCTTATTTACAAAGA
GGTATTAGCGAACATAATCAAATCCAAATTTCATTGGTCAAGGTGAACAT
TTTTAGGTTAACATACAAGTATATTGAACTGGAATTTGTCCTTGACTTTT
ACTCTATCTCAAACTTTAACTTTTATTTAACTTTCTCATTTCAGCATCCC
TATCCATCTGAGGAAGAGAAGAAGCAACTAGCAGTACAAACCAACCTTTC
CATATTACAAGTCAATAATTGGTATTTTGTTATTCTTGTACTGTAAAGTC
TTTTTACAAAATAAAACACAATTTGTAGTCTTTAAATACCATACACCTGA
GGGAAAAAAGGGGCTAACCCTTCAGAAAATGATTTTGTCTGGATGAATTT
ATGACTGTTAAATTGTGAAGAACTTTGATTTAGAAAGGAGTGCATTTTTC
ACCTTTGAATTTCATGCAAGAATTTTACTTCTTGTTGTGTGGGAAAAAAT
TATTCACGTTTTAAGGTGTGGCTGGGTGATTATTTATTTTCTCCTGCGTT
TTTTGGTTTTGAAAAATATGAAAATAAAAAGAATGGACGTTTCGTTTCAG
GTTCATCAATGCACGTCGCCGTATTATTCAACCCATGCTTGATTCCTCCA
GCACTGTCTTGAAGAACAACAAAAAACCTAAACAACCACGGAACGCAGCT
CAAAAGGGCTGGGCAAGCACCATGGAAGAACTTAGCACAACCAATAGACC
TGGCCCTTTAAGTCCTCCAGCTCAACAACCTGTACGATACATGATGAGTC
CTGTCACTTCTTCGGCACCTGGTCCAGTCTTACTTAACCTTGGAGCACAA
TCGACAAACCAACCTTCCACAACACAATCCATGTTAATGAGTCCGGTACA
GTTTGTTCAAGTCAACCAGATCCCTTCTATGCAGAGCATACAGGCTGCTA
CAGGCTACCTACCACCTCACACTGCCAGCACACAAACCTCATTCCCCTCT
ACCACTAATGCTAATTCAGTAGAAACCTCTTCTAAGGATACATGAGATTG
TTTCATTGGTGGAAACTTTTCATTATGGAAAAAAAACGAAAAATGAAAGA
TTTTTTTATATGTTTTGTGGTAGTTTATCCTGTTTTAATATAGTGTTTAT
TATTTGCTTTGTATTTTTGATGTCTTTATTTTTATTTTTTTGTGTCCCTT
TAATGTTAACGGTAGTTTGGCTAACGCTTCAGGTTGACAGACCAGATTTG
AAAACACAGTAGGTATCATATCTCCTTATGCTTATAAAAATAGATTAGGG
TGTCCTCACACTTTGAATGTCCTATCTAACATTTTTTGAAGGTAGCAAAT
ATAAAGTTCTATTAGGCTTTTCCAGAAAAAAATTAAATATCAGGGGTGAA
GGATATAACATCTTTTATAAATTTACCCCTCGGACATTGTGAATTATGAC
CCCGAACAAGCATAAGTTGACCCCCTGGACATTAAAAATAACCCTTAAAC
CGAGCAAAATTAATCCCAAACAGAGCAAGTTTACCCCCTGGACAGGGCAA
GTTTTGTAGATCCTTCACTACCC

Coding sequence (CDS) from alignment at scaffold_220:477673..489195-

>TCONS_00052864 ID=TCONS_00052864|Name=TCONS_00052864|organism=Clytia hemisphaerica|type=CDS|length=5652bp|location=Sequence derived from alignment at scaffold_220:477673..489195- (Clytia hemisphaerica)
GTTCATCAATGCACGTCGCCGTATTATTCAACCCATGCTTGATTCCTCCA
GCACTGTCTTGAAGAACAACAAAAAACCTAAACAACCACGGAACGCAGCT
CAAAAGGGCTGGGCAAGCACCATGGAAGAACTTAGCACAACCAATAGACC
TGGCCCTTTAAGTCCTCCAGCTCAACAACCTGTACGATACATGATGAGTC
CTGTCACTTCTTCGGCACCTGGTCCAGTCTTACTTAACCTTGGAGCACAA
TCGACAAACCAACCTTCCACAACACAATCCATGTTAATGAGTCCGGTACA
GTTTGTTCAAGTCAACCAGATCCCTTCTATGCAGAGCATACAGGCTGCTA
CAGGCTACCTACCACCTCACACTGCCAGCACACAAACCTCATTCCCCTCT
ACCACTAATGCTAATTCAGTAGAAACCTCTTCTAAGGATACATGACATCC
CTATCCATCTGAGGAAGAGAAGAAGCAACTAGCAGTACAAACCAACCTTT
CCATATTACAAGTCAATAATTGATGCTGAAATCACTTCAAGTCTTGGCTA
TCCACCTTCTGGAACTTGGAAAAGTGAATGAATTATGCAAGGACTTTTGT
ACAAGATACATATCGTGCTTAAAAGGAAAGTTGAACAGTGAAAATATTAT
GAGAACATTAGACATTCAAAACACACCACCTGGCTCACCTACTTCTCCTA
AGAATCCCACACAACCTATGTCAGACGTCACAATGGTTGGATCTACAATT
GATGCTTCTATTCTAGCTCCACCAAAAACACCAACAGCTGTCCCAGTAAA
TGGTCGAAGCTCTTCAACTTCATCTTTAGAAAATAACAACACTACTTTGA
AAGAAGACTTCTCGATTCATCGCTCAATGTCTGTTGACACTCCAAGTTTT
ATTGGTGCAGCTGGATTGGCAACACCAATGTCGCCTGAACAACTGACAGG
CTTTCTTACCAAGAAGAACAAGGGTGGTAAAAGGGGAACACTTCCAAAAG
TAGCAACAAATGTACTGAAAGCATGGCTGTTCCAACACTTAGTTATGACT
GATGATCAGATAGTCATAAAGTATGAAGAATCCTTTACCAACAACAATAA
CAACCTGAACAATGAAGGTTCTTCATCACAATCAGAGCGGTCACCCTCGT
CACCTTTAGGCTTGTCAGAACTAGAGAGTTCAACAACATTGGGCAACATA
GCTCAAAATGTGAACCCTAATGACAAAATGGCCATCTACCAACATCCATT
GTTTCCACTTTTACGCTTGCTTTTTGAAAAGTGTGAATCTGCAACCAAGT
CTATTGACAATGCTGACTCTCTCTGTTTTGAAGCTGAGATGAAAGCCTAC
ATCACGGAAATGGCAAAAGTCAACAAACCTTTCTTCACAGATAATGTTGA
AGTTGACACTTTGGTTCATCAATGCACGTCGCCGTATTATTCAACCCATG
CTTGATTCCTCCAGCACTGTCTTGAAGAACAACAAAAAACCTAAACAACC
ACGGAACGCAGCTCAAAAGGGCTGGGCAAGCACCATGGAAGAACTTAGCA
CAACCAATAGACCTGGCCCTTTAAGTCCTCCAGCTCAACAACCTGTACGA
TACATGATGAGTCCTGTCACTTCTTCGGCACCTGGTCCAGTCTTACTTAA
CCTTGGAGCACAATCGACAAACCAACCTTCCACAACACAATCCATGTTAA
TGAGTCCGGTACAGTTTGTTCAAGTCAACCAGATCCCTTCTATGCAGAGC
ATACAGGCTGCTACAGGCTACCTACCACCTCACACTGCCAGCACACAAAC
CTCATTCCCCTCTACCACTAATGCTAATTCAGTAGAAACCTCTTCTAAGG
ATACATGACATCCCTATCCATCTGAGGAAGAGAAGAAGCAACTAGCAGTA
CAAACCAACCTTTCCATATTACAAGTCAATAATTGATGCTGAAATCACTT
CAAGTCTTGGCTATCCACCTTCTGGAACTTGGAAAAGTGAATGAATTATG
CAAGGACTTTTGTACAAGATACATATCGTGCTTAAAAGGAAAGTTGAACA
GTGAAAATATTATGAGAACATTAGACATTCAAAACACACCACCTGGCTCA
CCTACTTCTCCTAAGAATCCCACACAACCTATGTCAGACGTCACAATGGT
TGGATCTACAATTGATGCTTCTATTCTAGCTCCACCAAAAACACCAACAG
CTGTCCCAGTAAATGGTCGAAGCTCTTCAACTTCATCTTTAGAAAATAAC
AACACTACTTTGAAAGAAGACTTCTCGATTCATCGCTCAATGTCTGTTGA
CACTCCAAGTTTTATTGGTGCAGCTGGATTGGCAACACCAATGTCGCCTG
AACAACTGACAGGCTTTCTTACCAAGAAGAACAAGGGTGGTAAAAGGGGA
ACACTTCCAAAAGTAGCAACAAATGTACTGAAAGCATGGCTGTTCCAACA
CTTAGTTATGACTGATGATCAGATAGTCATAAAGTATGAAGAATCCTTTA
CCAACAACAATAACAACCTGAACAATGAAGGTTCTTCATCACAATCAGAG
CGGTCACCCTCGTCACCTTTAGGCTTGTCAGAACTAGAGAGTTCAACAAC
ATTGGGCAACATAGCTCAAAATGTGAACCCTAATGACAAAATGGCCATCT
ACCAACATCCATTGTTTCCACTTTTACGCTTGCTTTTTGAAAAGTGTGAA
TCTGCAACCAAGTCTATTGACAATGCTGACTCTCTCTGTTTTGAAGCTGA
GATGAAAGCCTACATCACGGAAATGGCAAAAGTCAACAAACCTTTCTTCA
CAGATAATGTTGAAGTTGACACTTTGGTTCATCAATGCACGTCGCCGTAT
TATTCAACCCATGCTTGATTCCTCCAGCACTGTCTTGAAGAACAACAAAA
AACCTAAACAACCACGGAACGCAGCTCAAAAGGGCTGGGCAAGCACCATG
GAAGAACTTAGCACAACCAATAGACCTGGCCCTTTAAGTCCTCCAGCTCA
ACAACCTGTACGATACATGATGAGTCCTGTCACTTCTTCGGCACCTGGTC
CAGTCTTACTTAACCTTGGAGCACAATCGACAAACCAACCTTCCACAACA
CAATCCATGTTAATGAGTCCGGTACAGTTTGTTCAAGTCAACCAGATCCC
TTCTATGCAGAGCATACAGGCTGCTACAGGCTACCTACCACCTCACACTG
CCAGCACACAAACCTCATTCCCCTCTACCACTAATGCTAATTCAGTAGAA
ACCTCTTCTAAGGATACATGACATCCCTATCCATCTGAGGAAGAGAAGAA
GCAACTAGCAGTACAAACCAACCTTTCCATATTACAAGTCAATAATTGAT
GCTGAAATCACTTCAAGTCTTGGCTATCCACCTTCTGGAACTTGGAAAAG
TGAATGAATTATGCAAGGACTTTTGTACAAGATACATATCGTGCTTAAAA
GGAAAGTTGAACAGTGAAAATATTATGAGAACATTAGACATTCAAAACAC
ACCACCTGGCTCACCTACTTCTCCTAAGAATCCCACACAACCTATGTCAG
ACGTCACAATGGTTGGATCTACAATTGATGCTTCTATTCTAGCTCCACCA
AAAACACCAACAGCTGTCCCAGTAAATGGTCGAAGCTCTTCAACTTCATC
TTTAGAAAATAACAACACTACTTTGAAAGAAGACTTCTCGATTCATCGCT
CAATGTCTGTTGACACTCCAAGTTTTATTGGTGCAGCTGGATTGGCAACA
CCAATGTCGCCTGAACAACTGACAGGCTTTCTTACCAAGAAGAACAAGGG
TGGTAAAAGGGGAACACTTCCAAAAGTAGCAACAAATGTACTGAAAGCAT
GGCTGTTCCAACACTTAGTTATGACTGATGATCAGATAGTCATAAAGTAT
GAAGAATCCTTTACCAACAACAATAACAACCTGAACAATGAAGGTTCTTC
ATCACAATCAGAGCGGTCACCCTCGTCACCTTTAGGCTTGTCAGAACTAG
AGAGTTCAACAACATTGGGCAACATAGCTCAAAATGTGAACCCTAATGAC
AAAATGGCCATCTACCAACATCCATTGTTTCCACTTTTACGCTTGCTTTT
TGAAAAGTGTGAATCTGCAACCAAGTCTATTGACAATGCTGACTCTCTCT
GTTTTGAAGCTGAGATGAAAGCCTACATCACGGAAATGGCAAAAGTCAAC
AAACCTTTCTTCACAGATAATGTTGAAGTTGACACTTTGGTTCATCAATG
CACGTCGCCGTATTATTCAACCCATGCTTGATTCCTCCAGCACTGTCTTG
AAGAACAACAAAAAACCTAAACAACCACGGAACGCAGCTCAAAAGGGCTG
GGCAAGCACCATGGAAGAACTTAGCACAACCAATAGACCTGGCCCTTTAA
GTCCTCCAGCTCAACAACCTGTACGATACATGATGAGTCCTGTCACTTCT
TCGGCACCTGGTCCAGTCTTACTTAACCTTGGAGCACAATCGACAAACCA
ACCTTCCACAACACAATCCATGTTAATGAGTCCGGTACAGTTTGTTCAAG
TCAACCAGATCCCTTCTATGCAGAGCATACAGGCTGCTACAGGCTACCTA
CCACCTCACACTGCCAGCACACAAACCTCATTCCCCTCTACCACTAATGC
TAATTCAGTAGAAACCTCTTCTAAGGATACATGACATCCCTATCCATCTG
AGGAAGAGAAGAAGCAACTAGCAGTACAAACCAACCTTTCCATATTACAA
GTCAATAATTGATGCTGAAATCACTTCAAGTCTTGGCTATCCACCTTCTG
GAACTTGGAAAAGTGAATGAATTATGCAAGGACTTTTGTACAAGATACAT
ATCGTGCTTAAAAGGAAAGTTGAACAGTGAAAATATTATGAGAACATTAG
ACATTCAAAACACACCACCTGGCTCACCTACTTCTCCTAAGAATCCCACA
CAACCTATGTCAGACGTCACAATGGTTGGATCTACAATTGATGCTTCTAT
TCTAGCTCCACCAAAAACACCAACAGCTGTCCCAGTAAATGGTCGAAGCT
CTTCAACTTCATCTTTAGAAAATAACAACACTACTTTGAAAGAAGACTTC
TCGATTCATCGCTCAATGTCTGTTGACACTCCAAGTTTTATTGGTGCAGC
TGGATTGGCAACACCAATGTCGCCTGAACAACTGACAGGCTTTCTTACCA
AGAAGAACAAGGGTGGTAAAAGGGGAACACTTCCAAAAGTAGCAACAAAT
GTACTGAAAGCATGGCTGTTCCAACACTTAGTTATGACTGATGATCAGAT
AGTCATAAAGTATGAAGAATCCTTTACCAACAACAATAACAACCTGAACA
ATGAAGGTTCTTCATCACAATCAGAGCGGTCACCCTCGTCACCTTTAGGC
TTGTCAGAACTAGAGAGTTCAACAACATTGGGCAACATAGCTCAAAATGT
GAACCCTAATGACAAAATGGCCATCTACCAACATCCATTGTTTCCACTTT
TACGCTTGCTTTTTGAAAAGTGTGAATCTGCAACCAAGTCTATTGACAAT
GCTGACTCTCTCTGTTTTGAAGCTGAGATGAAAGCCTACATCACGGAAAT
GGCAAAAGTCAACAAACCTTTCTTCACAGATAATGTTGAAGTTGACACTT
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033395XLOC_033395Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052864-exon-scaffold_220-1575043694:488787..489195TCONS_00052864-exon-scaffold_220-1575043694:488787..489195Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1575043694:480061..480491TCONS_00052864-exon-scaffold_220-1575043694:480061..480491Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1575043694:479234..479755TCONS_00052864-exon-scaffold_220-1575043694:479234..479755Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1575043694:478975..479051TCONS_00052864-exon-scaffold_220-1575043694:478975..479051Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1575043694:477673..478645TCONS_00052864-exon-scaffold_220-1575043694:477673..478645Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1510915933:488787..489195TCONS_00052864-exon-scaffold_220-1510915933:488787..489195Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1510915933:480061..480491TCONS_00052864-exon-scaffold_220-1510915933:480061..480491Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1510915933:479234..479755TCONS_00052864-exon-scaffold_220-1510915933:479234..479755Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1510915933:478975..479051TCONS_00052864-exon-scaffold_220-1510915933:478975..479051Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1510915933:477673..478645TCONS_00052864-exon-scaffold_220-1510915933:477673..478645Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1491911889:488787..489195TCONS_00052864-exon-scaffold_220-1491911889:488787..489195Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1491911889:480061..480491TCONS_00052864-exon-scaffold_220-1491911889:480061..480491Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1491911889:479234..479755TCONS_00052864-exon-scaffold_220-1491911889:479234..479755Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1491911889:478975..479051TCONS_00052864-exon-scaffold_220-1491911889:478975..479051Clytia hemisphaericaexon
TCONS_00052864-exon-scaffold_220-1491911889:477673..478645TCONS_00052864-exon-scaffold_220-1491911889:477673..478645Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052864-proteinTCONS_00052864-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:477673..489195 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.5473	3.67608	2.19186	2.08927	45.1035	35.7968	26.3408	27.5775	10.2897	16.977	8.9573	6.49169	6.37385	6.13211	6.94906	9.56847	9.57379	8.70665	7.0801	7.23595	9.08555	8.76257	8.26964	9.53021	11.9196	11.6776	5.04168	5.00952	8.65654	8.33133
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR032453PKNOX/Meis_N
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
Blast
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BLAST of TCONS_00052864 vs. Swiss-Prot (Human)
Match: PKNX1 (Homeobox protein PKNOX1 OS=Homo sapiens GN=PKNOX1 PE=1 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 6.791e-65
Identity = 136/321 (42.37%), Postives = 184/321 (57.32%), Query Frame = 1 
Query:  649 DKMAIYQHPLFPLLRLLFEKCESATKSIDNADSLCFEAEMKAYITEMAKVNKPFFTDNVEVDTLMLKSLQVLAIHLLELGKVNELCKDFCTRYISCLKGKLNSENIMRTLDIQNTPPGSPTSPKNPTQPMSDVTMV----GSTIDASILAPPKTPTAVPVNGRXXXXXXXXXXXXXXKEDFSIHRSMSVDTPSFIGAAGLATPMSPEQL-------------TGFLTKKNKGG---KRGTLPKVATNVLKAWLFQHLVHPYPSEEEKKQLAVQTNLSILQVNNWFINARRRIIQPMLDSSSTVLKNNKKPKQPRNAAQKGW 1551
            DK AIY+HPLFPLL LLFEKCE +T+  +   S  F+ +++ ++ +  K  KPFF ++ E D LM+K++QVL IHLLEL KVNELCKDFC+RYI+CLK K+NSE ++      +  PGSP SP    Q  S +T      G  + AS L       A    G                   ++++ ++V TP       +   +SP  +                +  ++ G    KRG LPK ATNV+++WLFQH+ HPYP+E+EKKQ+A QTNL++LQVNNWFINARRRI+QPMLDSS +     KK        Q+ W
Sbjct:   54 DKQAIYRHPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLMVKAIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLL------SGEPGSPYSPVQSQQIQSAITGTISPQGIVVPASALQQGNVAMATVAGG-------------------TVYQPVTVVTPQ---GQVVTQTLSPGTIRIQNSQLQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFW 346
The following BLAST results are available for this feature:
BLAST of TCONS_00052864 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKNX16.791e-6542.37Homeobox protein PKNOX1 OS=Homo sapiens GN=PKNOX1 ... [more]
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