TCONS_00052883 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052883
Unique NameTCONS_00052883
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length106

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052883 ID=TCONS_00052883|Name=TCONS_00052883|organism=Clytia hemisphaerica|type=transcript|length=106bp
CGAAATTGCGCTGTGTGTTGAAATCCATTGGCTTCATAATGCATATTGTT
CATCTTGACTTTTGGTCAGTACAAATAATCATTGTTGAATGTTCGTGCAA
TGGCTT
Run BLAST on NCBI

transcript from alignment at scaffold_220:298327..298432

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052883 ID=TCONS_00052883|Name=TCONS_00052883|organism=Clytia hemisphaerica|type=transcript|length=106bp|location=Sequence derived from alignment at scaffold_220:298327..298432 (Clytia hemisphaerica)
AAGCCATTGCACGAACATTCAACAATGATTATTTGTACTGACCAAAAGTC
AAGATGAACAATATGCATTATGAAGCCAATGGATTTCAACACACAGCGCA
ATTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033411XLOC_033411Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052883-exon-scaffold_220-1491911889:298327..298432TCONS_00052883-exon-scaffold_220-1491911889:298327..298432Clytia hemisphaericaexon
TCONS_00052883-exon-scaffold_220-1510915933:298327..298432TCONS_00052883-exon-scaffold_220-1510915933:298327..298432Clytia hemisphaericaexon
TCONS_00052883-exon-scaffold_220-1575043694:298327..298432TCONS_00052883-exon-scaffold_220-1575043694:298327..298432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:298327..298432 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052883 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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