TCONS_00052949 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052949
Unique NameTCONS_00052949
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1561

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052949 ID=TCONS_00052949|Name=TCONS_00052949|organism=Clytia hemisphaerica|type=transcript|length=1561bp
ACCTtaataaaacattttgaaaaaatcatttcagaTTAACTTGGCTTGCA
ACATAAATCCCTGTCAAAGCGGAGGAATTTGTTCACCTTCGAGTCTCGTT
GCTGCTGGTTATACTTGCACATGCCCTACTGGATTTTCTGGTCAAACTTG
TACTGAATCAAGCTGTAGCGGAAACCCTTGTGCCACAGGAAGTACATGTG
TCCCTGATGCTTCAGCCAATGGCTTTTCATGCACTTGTACTGCTGGCCAA
TCAAATCCTCTCTGTAACgTCGCCGATGGTTGTGGAACAGTCAGTGGAGA
AAACCCATGTTTAAACGGAGGAGATTGTTCTCTTTCAAATACTCTCTACG
CTGGTTATTCTTGTCAATGTAATGGAGGATTCTCAGGACCAATGTGTAAA
ATCAGTGCTTGCTCAAAAAACCCATGTCAAAACGGTGGTAGTTGTACGGC
AAAACCATCCAGTCCTGGATTCGAATGTGCTTGTGTTGCTCCCTATACTG
GTGCCATCTGTCAGGAATCAATTTGTTCTTTACAACAACCTTGCAAAAAC
GGAGGATCATGCGCAGTAGCATCAGGAACACCTGGTTACCAATGCACATG
CGCAAACAATGGATACACTGGACCCACTTGTGAAGCTTCGGCCTGCGACG
TAAACCCATGTGCTAATGGAGCCCAATGTAACCCATCTGCTGCATACCCA
GGATATACTTGTACATGTCCAGTCGGATTTTCAGGACCAACTTGTAGTGC
TTCAGCATGTGATGCCAACCCATGTAAAAACGGCGCAACATGTACCCCAG
ATGGCACCGCCCTTGGTTATTCTTGCGCATGCGTAGGAGGATATTCTGGA
TCAACTTGTACTGCTTCTGCTTGCGATGCTTTGCCATGTTTTAATGGAGG
AACTTGTATTGTTGATTCAAGTAATGATGGATTCACGTGTAATTGCCAAC
CTGGATATTCTGGTGCCACGTGCAGTCAATCAGCTTGTGGACCAAACCCA
TGTCAAAATGGCGGAAGTTGTCAACCTGATAACTCTGCTGACGGTTATAC
TTGCACATGTGAAGAAGGATATTTCGGTGTCAATTGTATGGCCTCAAATT
GTGATATGCAACCATGTCAAAATGGTGGAAGTTGCGAACCTGACGGTTCG
GCTGATGGTTTTACTTGCACTTGCGAAGTCGGATATTTTGGTGTTCATTG
CACAGCATCAGCCTGTACCAGTCACCCATGTAAATATGGAGGAAGTTGTC
AACCAGATGGATCGGATGATGGATACACTTGTTCATGTCTTACTGGATTC
TTTGGAAACCAATGTGAATTGAGATCTTGTGTCGGAAGTAACCCCTGTCA
AAATGGTGGATTATGTTTTCAACAAGGAATATCGCAAGCTTGTATCTGCA
ACAATGGATTCACCGGCTCCAATTGTGAGgTTCAACCGACCCAACCTGCA
GTTTAAGACTTTTTTGTTATCATCACATAGATCGCACCATTAACTCCTGC
CCCACAGACCAACCCACCGACTAATCCGCCAACTAACCCACCAACTAACC
CACCAACCAAC
Run BLAST on NCBI

transcript from alignment at scaffold_222:70298..75438-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052949 ID=TCONS_00052949|Name=TCONS_00052949|organism=Clytia hemisphaerica|type=transcript|length=5141bp|location=Sequence derived from alignment at scaffold_222:70298..75438- (Clytia hemisphaerica)
ACCTTAATAAAACATTTTGAAAAAATCATTTCAGATTAACTTGGCTTGCA ACATAAATCCCTGTCAAAGCGGAGGAATTTGTTCACCTTCGAGTCTCGTT GCTGCTGGTTATACTTGCACATGCCCTACTGGATTTTCTGGTCAAACTTG TACTGTGAGTGGTTTCGCTTTTCGAATGATGTTTTCTTATAAAACAATCT TTTTGACCCTTTACAAAAACAAATACTACCAATTTTGCTTCTCTAAAACT TGGAACTTTCTAAAAGAATTTTTTGCTGAAATTCATTCACCAAATGGATA TAAGGCTATCAATGTACCTCAAAAAATATTATATGCACCACAATTGACTG TGTTCAAGTTCCAATCATTTCAGGCAGGGTGTTAGGCGAAAGACTCTGGT CATAACTTCATTCTCCCTTCATTATCGAATCTTTGCTTTCAAGGAATCAA GCTGTAGCGGAAACCCTTGTGCCACAGGAAGTACATGTGTCCCTGATGCT TCAGCCAATGGCTTTTCATGCACTTGTACTGCTGGCCAATCAAATCCTCT CTGTAACGTAAGTTTGTCTCTTACATTCAAATGAAGATATCAACGGCCCA AGCGAAGCTTAAAAAATATTAAATATCAGCTTTCAAAGCAAACATGAGAG GCTTTCATAAAAGTAAACCGTATTTGCAAATCTTAGTGAGTCAATCTCTA TTATCAAGGTTTTGTATATTAGAATCTTTCTTTCTTAAAGTNTTTCTGGT CAAACTTGTACTGTGAGTGGTTTCGATTTTCGAATGATTTGTTCTTAAAA AACAATCTTTTTGACCCTTTACAAAAACAAATACTACCAATTTTGCTTCT CTAGAACTTGGAACTGTCTAAAAGAATCTTTGCTGAAATTCATTCACCAA ATGTATATAAGGCAATCAATGTACCTCAAGAAATATTATAAGCACCACAA TTGACTGTGTTCAAGTTCCAAGCATTTCAGGCAGGGTGTTAGGCGAAAGA CTCTGGTCATAACTTCATTCTCCCTTCATTATCGAATCTTTTCTTTCAAG GAATCAAGCTGTAGCGGAAACCCTTGTGCCACAGGAAGTACATGTGTCCC TGATGCTTCAGCCAATGGCTTTTCATGCACTTGTGCTGCTGGCCAATCAA ATCCTCTCTGTAACGTAAGTTTGTCTCTTACATTCAAATGAAGATATCAA CGTCCCAAGCGAAGCTTAAAAAATATTAAATATCAGCTTTCAAAGCAAAC ATGAGAGGCTTTCATAAAAGTAAACCGTATTTGCAAATCTTAGTGAGTCA ATCTCTATTATCAAGGTTTTGTATATTAGAATCTTTCTTTCTTAAAGTCT CGATTGTCCTTACAGAAATAATAAGGTTATGTACGAAAACTTTTCACTTC AGGTCGCCGATGGTTGTGGAACAGTCAGTGGAGAAAACCCATGTTTAAAC GGAGGAGATTGTTCTCTTTCAAATACTCTCTACGCTGGTTATTCTTGTCA ATGTAATGGAGGATTCTCAGGACCAATGTGTAAAGTAAGATTTTTTACAA ACATCTATTAACTAAGTTTGAATAAACAAGGCGAATACTTTTTACACCGC AGTTTTCTTTCCATTGCAAAGAAGGATTCTTAGGATCAATTTGTTCAAAA AAATTTTCAAAATAAACCTCTGTATTGCAAGTTTGGATGAACAAGCTAAA CAAACTTAACACTGATTATTTTTTTTATAATAAAGCATATTGTCCTGATT GGTTGTATCACGAATTTAAAGCCATCATATAGAGATATTCTTTCTATTAT AGATCAGTGCTTGCTCAAAAAACCCATGTCAAAACGGTGGTAGTTGTACG GCAAAACCATCCAGTCCTGGATTCGAATGTGCTTGTGTTGCTCCCTATAC TGGTGCCATCTGTCAGGTTAGTTCATGTTTAAGTATCATATTATCAATGC CACAGTGTGGACCTCAAAGATTGAACTTAACATTTGGTTATTAGTTATGT GATGGTAAAGAGAGACCCTCGAATCAAATTTGTTGGTAATAAACCAAAAC CTATTCATTATGTTCAATATGTAATGCTTACTACCGCGAAACTGGCTAAA ACCGGGGTGTTTCCGTTAAAAATATTACGTAATGAATATATCATGAATGA AAAACTTCAATTTTCCCAGGAATCAATTTGTTCTTTACAACAACCTTGCA AAAACGGAGGATCATGCGCAGTAGCATCAGGAACACCTGGTTACCAATGC ACATGCGCAAACAATGGATACACTGGACCCACTTGTGAAGCTTCGGCCTG CGACGTAAACCCATGTGCTAATGGAGCCCAATGTAACCCATCTGCTGCAT ACCCAGGATATACTTGTACATGTCCAGTCGGATTTTCAGGACCAACTTGT AGTGTAAGTATCATTAGAGTTATAAGAGAATTCTGCCAACTAAACAATGC TTGGAATTGTAAACTTTCAAACATATTATATATTAGTACACGTTTTTTTT AAAGAAACACACTTTTAAAAATCATGAGGCAAAGAATACCTAAAAATTAA AGAACATCTAAGAAACATGCTGAGACTGAGAACGAGAAGAATTTTTTAAT TCGTTTTTTTTAAGAACCTTCCAATCAAAACAAATGCTTTTTTTTGCATG AAAAAAAGGCTGAATATGTCAAAAAGTTTAGAAACATGTAAGAAATATTT AAGGCTGAAAAGACCGATTTCTTAAGAAACATTGAGGCTGCTTGGTAAAA CTAGTTTCTTAAAAAAAAATGTGTACCATGAAAAATCGCAAAACCTTTCA ACTAATTCTATTCTTTCTCACAACTTTTTAGGCTTCAGCATGTGATGCCA ACCCATGTAAAAACGGCGCAACATGTACCCCAGATGGCACCGCCCTTGGT TATTCTTGCGCATGCGTAGGAGGATATTCTGGATCAACTTGTACTGTAAG TAATTTCACTTGCCTCGCTCAGTCAGTTCTTATTGATAGTGTTTTGAACG GGTATCTAGAACTAACTGATATTATATTGTTACAGTGGATCTCTATAACT CGAACTCGCACGGAATTACAAATCTCTCCGTATTAAGCAAACTCCGAGAT ATAGAGTAAGTTTTATAAGGCATTGTTAACTGAAGGGACCATAACAATTG TTCGAGTTAAGGAAATTTCGAGTAATGGTGTAAGGTTTATAAAGCATTGT TCACTGAAGAGACAATAGCATAAAACTTGCTATAAGGAGGCATTCCAGTT ATAGAGGTTCAAATTAAAAACACTGCATAAAGAATTCGCACATGTTCACT AAAAGCAAATTTAATCTTCAAATGATTGTACTATCATGATACAAAGAGAT AAGATATATTCCCACGATAAGTCAATTCAAACTTACAGCATTCTTACTGA AAACTATTCCACTTTCTTTCCAGGCTTCTGCTTGCGATGCTTTGCCATGT TTTAATGGAGGAACTTGTATTGTTGATTCAAGTAATGATGGATTCACGTG TAATTGCCAACCTGGATATTCTGGTGCCACGTGCAGTGTAAGTTGCCTCG ATTACTCAATCATCAAAAACAGTGTTTTAGTTAAAACTTTGAGATCGTTC CATTATGGTAATGTTGAAACATAGGTTAGAGACCCTAGCTGCACATTATT GATTGATAACCTTATCTGAAATCGCCTATTTTCTGTCAACTCAAAAATAG TATTTTAAGTTCACTTCACTTCTGACTCGATAAATGAACCAAAAAATACA ATGTCTTGAACTGAAAATTTTTTTTCTTTCCACAGCAATCAGCTTGTGGA CCAAACCCATGTCAAAATGGCGGAAGTTGTCAACCTGATAACTCTGCTGA CGGTTATACTTGCACATGTGAAGAAGGATATTTCGGTGTCAATTGTATGG TAAGTGTCAAAACACCAATTAATTTTCTGCAAAGGTTTTGTCATTGAAAT TGACCATATCATAAAATGCAATCTATTGGATTTACTCTCCAAAAACATCG TTCCAGGGGTAATTTATTCTTCCGTTTGTATCTAAACTAATCCGTTTTAA TGGAAATCCTATTAACTTAACTTAGAATTTAACTTTTCGTGTTCTTTATA TCCAGGCCTCAAATTGTGATATGCAACCATGTCAAAATGGTGGAAGTTGC GAACCTGACGGTTCGGCTGATGGTTTTACTTGCACTTGCGAAGTCGGATA TTTTGGTGTTCATTGCACAGTAAGTAATTTTATTTTCCCAATCTGACACA AGTAACTTTTGTAACGTTTTGNTGTTAGTAATTTTATTTTCCCAATCTGA CGCACAAGTAGTTTTTTTAACATTTTGTCCGTAAACTCGGACGATTTTTA CGAAACTTTCTTTTTTCATATCTGTTGAGTTTCTAACGTGGACAATTGTT ATTATGCTTTCGTGAACAATTTGAATGCAAGATTTATCAACAAATTTATA TATTGCTAAAAGTTTTTCATTTCTTTTCCTTTCTTTCCTAGGCATCAGCC TGTACCAGTCACCCATGTAAATATGGAGGAAGTTGTCAACCAGATGGATC GGATGATGGATACACTTGTTCATGTCTTACTGGATTCTTTGGAAACCAAT GTGAAGTGAGTTGAATCTTTTATCTCAAAGCTTTCTTTCTCAAACATTCT TATCCTATTTGATAGTATGACCAATGTCAAGTGAGTTACTTTGAAAATAC TTACAACTGTGATATGAACGTATATTGCCAAAACTGTGAAGAAATCCCTT TCTAATGTCTACACCTTTTCTATCTTAGTTGAGATCTTGTGTCGGAAGTA ACCCCTGTCAAAATGGTGGATTATGTTTTCAACAAGGAATATCGCAAGCT TGTATCTGCAACAATGGATTCACCGGCTCCAATTGTGAGGTAAGGAGTTG AATCTATGAAAATAATTTAGTGGGGAGCTATAATTATAGCACTTGGAAAA ATTAAAACCATCGTTTAGAGTTAACTAATTTTGGTTCAACTCTTTTTTTA TTTAATTAGGTTCAACCGACCCAACCTGCAGTTTAAGACTTTTTTGTTAT CATCACATAGATCGCACCATTAACTCCTGCCCCACAGACCAACCCACCGA CTAATCCGCCAACTAACCCACCAACTAACCCACCAACCAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033439XLOC_033439Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052949-exon-scaffold_222-1575043694:75285..75438TCONS_00052949-exon-scaffold_222-1575043694:75285..75438Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:74882..74995TCONS_00052949-exon-scaffold_222-1575043694:74882..74995Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:73905..74036TCONS_00052949-exon-scaffold_222-1575043694:73905..74036Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:73523..73636TCONS_00052949-exon-scaffold_222-1575043694:73523..73636Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:73036..73269TCONS_00052949-exon-scaffold_222-1575043694:73036..73269Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:72494..72607TCONS_00052949-exon-scaffold_222-1575043694:72494..72607Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:71902..72015TCONS_00052949-exon-scaffold_222-1575043694:71902..72015Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:71540..71653TCONS_00052949-exon-scaffold_222-1575043694:71540..71653Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:71220..71333TCONS_00052949-exon-scaffold_222-1575043694:71220..71333Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:70834..70947TCONS_00052949-exon-scaffold_222-1575043694:70834..70947Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:70550..70660TCONS_00052949-exon-scaffold_222-1575043694:70550..70660Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1575043694:70298..70429TCONS_00052949-exon-scaffold_222-1575043694:70298..70429Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:75285..75438TCONS_00052949-exon-scaffold_222-1510915933:75285..75438Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:74882..74995TCONS_00052949-exon-scaffold_222-1510915933:74882..74995Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:73905..74036TCONS_00052949-exon-scaffold_222-1510915933:73905..74036Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:73523..73636TCONS_00052949-exon-scaffold_222-1510915933:73523..73636Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:73036..73269TCONS_00052949-exon-scaffold_222-1510915933:73036..73269Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:72494..72607TCONS_00052949-exon-scaffold_222-1510915933:72494..72607Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:71902..72015TCONS_00052949-exon-scaffold_222-1510915933:71902..72015Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:71540..71653TCONS_00052949-exon-scaffold_222-1510915933:71540..71653Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:71220..71333TCONS_00052949-exon-scaffold_222-1510915933:71220..71333Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:70834..70947TCONS_00052949-exon-scaffold_222-1510915933:70834..70947Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:70550..70660TCONS_00052949-exon-scaffold_222-1510915933:70550..70660Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1510915933:70298..70429TCONS_00052949-exon-scaffold_222-1510915933:70298..70429Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:75285..75438TCONS_00052949-exon-scaffold_222-1491911889:75285..75438Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:74882..74995TCONS_00052949-exon-scaffold_222-1491911889:74882..74995Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:73905..74036TCONS_00052949-exon-scaffold_222-1491911889:73905..74036Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:73523..73636TCONS_00052949-exon-scaffold_222-1491911889:73523..73636Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:73036..73269TCONS_00052949-exon-scaffold_222-1491911889:73036..73269Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:72494..72607TCONS_00052949-exon-scaffold_222-1491911889:72494..72607Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:71902..72015TCONS_00052949-exon-scaffold_222-1491911889:71902..72015Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:71540..71653TCONS_00052949-exon-scaffold_222-1491911889:71540..71653Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:71220..71333TCONS_00052949-exon-scaffold_222-1491911889:71220..71333Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:70834..70947TCONS_00052949-exon-scaffold_222-1491911889:70834..70947Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:70550..70660TCONS_00052949-exon-scaffold_222-1491911889:70550..70660Clytia hemisphaericaexon
TCONS_00052949-exon-scaffold_222-1491911889:70298..70429TCONS_00052949-exon-scaffold_222-1491911889:70298..70429Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:70298..75438 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.429649 0.32844 0.119964 0.090765 2.18882 1.76304 1.42269 1.5508 2.31712 1.79743 3.96699 0.599003 2.11336 6.72314 0 0 0.197812 1.34297e-05 2.66908 1.12994 0 0.138513 2.91506e-06 0.26105 0.177199 0 0.107945 0 0.137723 0.620605
Blast
BLAST of TCONS_00052949 vs. Swiss-Prot (Human)
Match: NOTC1 (Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1 PE=1 SV=4)

HSP 1 Score: 218.009 bits (554), Expect = 3.861e-60
Identity = 187/490 (38.16%), Postives = 250/490 (51.02%), Query Frame = 2
Query:   32 QINLA-CNINPCQSGGICSPSSLVAAGYTCTCPTGFSGQTCTES--SCSGNPCATGSTCVPDASANGFSCTCTAGQSNPLC-NVADGCGTVSGENPCLNGGDCSLSNTLYAGYSCQCNGGFSGPMCKIS--ACSKNPCQNGGSCTAKPSSPGFECACVAPYTGAICQESICS-LQQPCKNGGSCAVASGTPGYQCTCANNGYTGPTCEA--SACDVNPCANGAQCNPSAAYPGYTCTCPVGFSGPTCSAS--ACDANPCKNGATCTPDGTALGYSCACVGGYSGSTCTASA--CDALPCFNGGTCIVDSSNDGFTCNCQPGYSGATCSQS--ACGPNPCQNGGSCQPDNSADGYTCTCEEGYFGVNCM--ASNCDMQPCQNGGSCEPDGSADGFTCTCEVGYFGVHCT--ASACTSHPCKYGGSCQPDGSDDG---YTCSCLTGFFGNQCE-LRSCVGSNPCQNGGLCFQQGISQACICNNGFTGSNCEV 1432
            +INL  C  +PC SG           GY C C  G++G  C  +   C+GNPC  G TC  +   NGF+C C  G  +P C +  + C +    NPC++G  C  S     GY C C+ G+SG  C I+   C  NPC NGG+C  K  + G+ C C   ++G  CQ +I      PC N G+C       GY+C C    YTG TCE   + C  +PC NG +C  S  Y  ++C CP G+ G TC      C  +PC++GA+C    T  GY C C  GYSG  C      C   PC NGG+C  D  N  F C+C PG+ G  C +    C  +PC+NG +C   +  D YTCTC  G+ G++C     +C    C NGG+C  DG  + FTC C  G+ G +C    + C S PC +GG+CQ     DG   Y C+C  G+ G  C+ L     S+PC+NGG C+Q      C C +G+TG  C+V
Sbjct:  639 EINLDDCASSPCDSGTCLDKID----GYECACEPGYTGSMCNINIDECAGNPCHNGGTC--EDGINGFTCRCPEGYHDPTCLSEVNECNS----NPCVHGA-CRDS---LNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTC--KDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCI--DDVAGYKCNCLL-PYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQ--NTHGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSC-TDGINTAF-CDCLPGFRGTFCEEDINECASDPCRNGANCT--DCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCV-DG-INSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQ-----DGCGSYRCTCPQGYTGPNCQNLVHWCDSSPCKNGGKCWQTHTQYRCECPSGWTGLYCDV 1096          

HSP 2 Score: 209.92 bits (533), Expect = 1.945e-57
Identity = 182/496 (36.69%), Postives = 244/496 (49.19%), Query Frame = 2
Query:   35 INL-ACNINPCQSGGICSPSSLVAAGYTCTCPTGFSGQTCTES--SCSGNPCATGSTCVPDASANGFSCTCTAGQSNPLCNVADGCGTVSGENPCLNGGDCSLSNTLYAGYSCQCNGGFSGPMCK--ISACSKNPCQNGGSCTAKPSSPGFECACVAPYTGAICQESICS-LQQPCKNGGSCAVASGTPGYQCTCANNGYTGPTCEAS--ACDVNPCANGAQCNPSAAYPGYTCTCPVGFSGPTCSASA--CDANPCKNGATCTPDGTALGYSCACVGGYSGSTCTAS--ACDALPCFNGGTCI--VDSSNDGFTCNCQPGYSGATCSQSA--CGPNPCQNGGSCQPDNSADGYTCTCEEGYFGVNCM--ASNCDMQPCQNGGSCEPDGSADGFTCTCEVGYFGVHC--TASACTSHPCKYGGSCQPDGSDDGYTCSCLTGFFGNQCEL----------RSCVG-SNPCQNGGLCFQQGISQACICNNGFTGSNCE 1429
            IN+  C  NPC +GG C        G+TC CP G+   TC      C+ NPC  G+      S NG+ C C  G S   C++ +        NPC+NGG C     + +GY C C  GFSGP C+  I+ C+ NPC N G+C    +  G++C C+ PYTGA C+  +      PC+NGG C  +     + C C   G+ G TCE     C ++PC +GA C     + GY C C  G+SG  C      C  NPC NG +CT DG    + C C+ G+ G+ C      C + PC NG  C   VDS    +TC C  G+SG  C  +   C  + C NGG+C   +  + +TC C  G+ G  C    + CD QPC +GG+C+ DG    + CTC  GY G +C      C S PCK GG C    +   Y C C +G+ G  C++          R  V  +  CQ+GGLC   G +  C C  G+TGS CE
Sbjct:  677 INIDECAGNPCHNGGTCEDG---INGFTCRCPEGYHDPTCLSEVNECNSNPCVHGAC---RDSLNGYKCDCDPGWSGTNCDINN---NECESNPCVNGGTCK---DMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVA--GYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCPT-GWQGQTCEVDINECVLSPCRHGASC--QNTHGGYRCHCQAGYSGRNCETDIDDCRPNPCHNGGSCT-DGINTAF-CDCLPGFRGTFCEEDINECASDPCRNGANCTDCVDS----YTCTCPAGFSGIHCENNTPDCTESSCFNGGTCV--DGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQ-DGCG-SYRCTCPQGYTGPNCQNLVHWCDSSPCKNGGKCWQTHTQ--YRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHCRCQAGYTGSYCE 1143          

HSP 3 Score: 186.422 bits (472), Expect = 1.449e-49
Identity = 173/489 (35.38%), Postives = 236/489 (48.26%), Query Frame = 2
Query:   35 INLACNINPCQSGGICSPSSLVAAGYTCTCPTGFSGQTCTESS-CSGNPCATGSTCVPDASANGFSCTCTAGQSNPLCNV-ADGCGTVSGENPCLNGGDCSLSNTLYAGYSCQCNGGFSGPMCK--ISACSKNPCQNGGSCTAKPS-SPGFECACVAPYTGAICQESICSLQ-QPCKNGGSCAVASGTPGYQCTCANNGYTGPTC--EASACDVNP--CANGAQCNPSAAYPGYTCTCPVGFSGPTCSASA--CDANPCKNGATCTPDGTALGYSCACVGGYSGSTCTA-SACDALPCFNGGTCIVDSSNDGFTCNCQPGYSGATCSQSA----CGPNPCQNGGSCQPDNSADGYTCTCEEGYFGVNCM--ASNCDMQPCQNGGSCEPDGSADGFTCTCEVGYFGVHCTA--SACTSHPCKYGGSCQPDGSDDGYTCSCLTGFFGNQCE--LRSCVGSNPCQNGGLCFQQGISQACICNNGFTGSNCEV 1432
            ++ AC  NPC++GG C   +L    Y C CP G+SG++C ++  C+ NPCA G  C+P  ++  + C C      P C    + CG   G   C +GG C   +     Y C C    +GP C+     CS +PCQNGG+C  +P+     ECAC+  +TG  C+E+I       CKNGG+C    G   Y C C    +TG  C  +   C + P  C NG  C+    + GY C C  G++G  CS +   C +  C +GATC  D  A  Y C C  G +G  C    AC + PC  G  C  +  N    C C  GY+G  CSQ       G NPC++ G C   N+   + C C +GY G  C    + C   PCQN  +C        F C C  GY GVHC      C S PC + G C    ++  + C C TGF G+ C+  +  C  S PC+NG  C     +  C+C  G+TG++CEV
Sbjct:  102 LDNACLTNPCRNGGTCDLLTLTE--YKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFEAS--YICHCPPSFHGPTCRQDVNECGQKPGL--CRHGGTC---HNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTC--RPTGDVTHECACLPGFTGQNCEENIDDCPGNNCKNGGAC--VDGVNTYNCRCPPE-WTGQYCTEDVDECQLMPNACQNGGTCH--NTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCH-DRVASFY-CECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCI--NTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCL--DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINE--FQCECPTGFTGHLCQYDVDEC-ASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEV 565          

HSP 4 Score: 162.925 bits (411), Expect = 6.899e-42
Identity = 184/587 (31.35%), Postives = 246/587 (41.91%), Query Frame = 2
Query:   32 QINLA-CNINPCQSGGICSPSSLVAAGYTCTCPTGFSGQTCTES--SCSGNPCATGSTCVPDASANGFSCTCTAGQSNPLCNV-ADGCGTVSGENPCLNGGDCSL-SNTLYAGYSCQCNGGFSGPMCK--ISACSKNPCQNGGSCTA------------------KPSSPG------------------FECACVAPYTGAICQESICS-LQQPCKNGGSCAVASGTPGYQCTCANNGYTGPTCE--ASACDVNPCANGAQCNPSAAYPGYTCTCPVGFSGPTCSA--------------------------------------------------SACDANPCKNGATCTPDGTALGYSCACVGGYSGSTCTAS--ACDALPCFNGGTCIVDSSNDGFTCNCQPGYSGATCSQSACGPNP----------CQNGGSCQPDNSADGYTCTCEEGYFGVNCM--ASNCDMQPCQNGGSCEPDGSADGFTCTCEVGYFGVHC--TASACTSHPCKYGGSCQ-PDGSDDGYTCSCLTGFFGNQCE--LRSCVGSNPCQNGGLCFQQGISQACICNNGFTGSNCEVQPTQP 1447
            ++ LA C  +PC++GG C  S    + ++C CPTG+ GQTC      C  +PC  G++C    +  G+ C C AG S   C    D C      NPC NGG C+   NT +    C C  GF G  C+  I+ C+ +PC+NG +CT                   + ++P                   F C C   +TG+ CQ  +     QPC +GG+C    G+  Y+CTC   GYTGP C+     CD +PC NG +C     +  Y C CP G++G  C                                                      C  +PC+NGATCT      GYSC CV GY G  C+     C + PC NGGTC+ D  N  + C+C  G  G  C  +    NP          C N G+C   +   GY+CTC  G+ G  C    + C   PC   G+       + F C C  G+ G  C    + C   PCK GG+C     +  G+ C C  GF G  CE   R+C GS  C NGG C     S  C+C   FTG  C+   + P
Sbjct:  827 EVVLAPCAPSPCRNGGECRQSEDYES-FSCVCPTGWQGQTCEVDINECVLSPCRHGASC--QNTHGGYRCHCQAGYSGRNCETDIDDCRP----NPCHNGGSCTDGINTAF----CDCLPGFRGTFCEEDINECASDPCRNGANCTDCVDSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGCGS--YRCTCPQ-GYTGPNCQNLVHWCDSSPCKNGGKC--WQTHTQYRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNTHHCRCQAGYTGSYCEDLVDECSPSPCQNGATCT--DYLGGYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTCL-DLPNT-YKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCV--DQVGGYSCTCPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTC-GSLRCLNGGTCISGPRSPTCLCLGPFTGPECQFPASSP 1390          

HSP 5 Score: 162.54 bits (410), Expect = 1.070e-41
Identity = 161/483 (33.33%), Postives = 226/483 (46.79%), Query Frame = 2
Query:   62 CQSGGICSPSSLVAAGYTCTCPTGFSGQTCTESS-CSGNPCATGSTC--VPDASANGFSCTCTAGQSNPLCN--VADGCGTVSGENPCLNGGDCSLSNTLYAGYSCQCNGGFSGPMCK-ISACSKNPCQNGGSCTAKPSSPGFECACVAPYTGAICQESICSL-QQP--CKNGGSCAVASGTPGYQCTCANNGYTGPTCEA--SACDVNPCANGAQCNPSAAYPGYTCTCPVGFSGPTCSASA--CDANPCKNGATCTPDGTALGYSCACVGGYSGSTCTASA--CDALP--CFNGGTCIVDSSNDGFTCNCQPGYSGATCSQSA--CGPNPCQNGGSCQPDNSADGYTCTCEEGYFGVNCMASN-CDMQPCQNGGSCEPDGSADGFTCTCEVGYFGVHCTASA----CTSHPCKYGGSCQPDGSDDGYTCSCLTGFFGNQCEL--RSCVGSNPCQNGGLCFQQGISQACICNNGFTGSNCEV 1432
            C +GG C  ++   A   C C   F G  C + + C   PC    TC  V       ++C+C  G S PLC   + + C T    NPC NGG C L       Y C+C  G+SG  C+    C+ NPC NGG C   P    + C C   + G  C++ +    Q+P  C++GG+C    G+  Y+C C    +TGP CE     C  +PC NG  C P+     + C C  GF+G  C  +   C  N CKNG  C  DG    Y+C C   ++G  CT     C  +P  C NGGTC   +++ G+ C C  G++G  CS++   C    C +G +C   +    + C C  G  G+ C  ++ C   PC  G +C+ +       CTC  GY G  C+         ++PC++ G C    +   + C CL G+ G +CE+    CV SNPCQN   C  Q     CIC  G+ G +CEV
Sbjct:   31 CLNGGKCEAANGTEA---CVCGGAFVGPRCQDPNPCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLT----NPCRNGGTCDL--LTLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCL--PFEASYICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVGS--YRCVCRAT-HTGPNCERPYVPCSPSPCQNGGTCRPTGDV-THECACLPGFTGQNCEENIDDCPGNNCKNGGACV-DGVNT-YNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTC--HNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCH--DRVASFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCI--NTLGSFECQCLQGYTGPRCEIDVNECV-SNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 489          

HSP 6 Score: 142.124 bits (357), Expect = 3.246e-35
Identity = 137/417 (32.85%), Postives = 182/417 (43.65%), Query Frame = 2
Query:   47 CNINPCQSGGICSPSSLVAAGYTCTCPTGFSGQTCTE--SSCSGNPCATGSTCVPDASANGFSCTCTAGQSNPLCNVADGCGTVSGENP-------CLNGGDC-SLSNTLYAGYSCQCNGGFSGPMCK--ISACSKNPCQNGGSCTAKPSSPGFECACVAPYTGAICQESICS-LQQPCKNGGSCAVASGTPGYQCTCANNGYTGPTCEASACDVNPCANGAQCNPS--------AAYPGYTCTCPVGFSGPTCS--ASACDANPCKNGATCTPDGTALGYSCACVGGYSGSTC--TASACDALPCFNGGTCIVDSSN-DGFTCNCQPGYSGATCSQSA--CGPNPCQNGGSCQPDNSADGYTCTCEEGYFGVNCMASNCDM----QPCQNGGSCEPDGSADGFTCTCEVGYFGVHC 1201
            C+  PC  GG C         Y CTCP G++G  C      C  +PC  G  C    +   + C C +G +   C+V      V+ +         C +GG C    NT    + C+C  G++G  C+  +  CS +PCQNG +CT      G+ C CVA Y G  C E I   L  PC+NGG+C     T  Y+C+C   G  G  CE +  D NP  +    +P             GY+CTCP GF G  C    + C +NPC    T         + C C  G++G  C    + C   PC NGGTC V S+   GF C C  G+ GATC   A  CG   C NGG+C   +     TC C   + G  C            PC N G+CEP   +  + C C   + G+ C
Sbjct: 1025 CDSQPCLHGGTCQDG---CGSYRCTCPQGYTGPNCQNLVHWCDSSPCKNGGKCW--QTHTQYRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLCVDAGNT----HHCRCQAGYTGSYCEDLVDECSPSPCQNGATCTDYLG--GYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTCLDLPNT--YKCSCP-RGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQVGGYSCTCPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTCGSLRCLNGGTCI--SGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCYNQGTCEPTSESPFYRCLCPAKFNGLLC 1425          

HSP 7 Score: 129.798 bits (325), Expect = 1.943e-31
Identity = 116/315 (36.83%), Postives = 153/315 (48.57%), Query Frame = 2
Query:  536 QPCKNGGSCAVASGTPGYQCTCANNGYTGPTCE-ASACDVNPCANGAQCN--PSAAYPGYTCTCPVGFSGPTCSA---SACDANPCKNGATCTPDGTALGYSCACVGGYSGSTC-TASACDALPCFNGGTCIVDSSNDGFTCNCQPGYSGATCSQSA--CGPNP--CQNGGSCQPDNSADGYTCTCEEGYFGVNCMASN--CDMQPCQNGGSCEPDGSADGFTCTCEVGYFGVHCTASA--CTSHPCKYGGSCQPDGSDDGYTCSCLTGFFGNQC--ELRSC-VGSNPCQNGGLCFQQGISQACICNNGFTGSNC 1426
            + C NGG C  A+GT    C C    + GP C+  + C   PC N   C+         Y C+C +GFSGP C     +AC  NPC+NG TC    T   Y C C  G+SG +C  A  C + PC NGG C+   ++  + C+C P + G TC Q    CG  P  C++GG+C   N    Y C C   + G NC      C   PCQNGG+C P G      C C  G+ G +C  +   C  + CK GG+C  DG +  Y C C   + G  C  ++  C +  N CQNGG C        C+C NG+TG +C
Sbjct:   29 ETCLNGGKCEAANGTEA--CVCG-GAFVGPRCQDPNPCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCDL-LTLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFEAS--YICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCH--NEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVT-HECACLPGFTGQNCEENIDDCPGNNCKNGGACV-DGVNT-YNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDC 332          
The following BLAST results are available for this feature:
BLAST of TCONS_00052949 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOTC13.861e-6038.16Neurogenic locus notch homolog protein 1 OS=Homo s... [more]
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