TCONS_00052961 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052961
Unique NameTCONS_00052961
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1913

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052961 ID=TCONS_00052961|Name=TCONS_00052961|organism=Clytia hemisphaerica|type=transcript|length=1913bp
TTCTTGTCATTGGATGAACAACCGGTAGACGAAATCGTTTGGTATCCtta
caataaaacaaaaatcattTATGGTTACTTAACCAATCTACCGAGTAATG
TGTACTATCGCGAAACGAATGATACCGACATACTAGAAAAGTATTTATCA
GAAAAGAATATCTTGACCACCATAGACAGTGTGGTAGTCATTACTTTTCA
TACGGACAAGAGAGGTGACATCCCAGGCTATCATCTTCACACCAATAACT
TTCAAATTGTTTTGGGAAGCCGGTATAGAGATTCAGCCTATGTTGGTTTC
ATATACCGCCGTTTGGATACACTCTTCGGCGTTGTCGGTTTTTCGGTTCC
AGGATGTTTCTCTTATGAATTCACTAAACCCCTAGAAACACATTATCTAC
CAAGTCAAAAAGGTGGCAAACAAGGTTTCTTTGGATCGTGGAGATGCTAC
GATTTCGAGACAGCAATGTTACCGAACGGGGTTCCAAGTGGTGATCAGTT
TTACGGATACCTGAATGACGAACTACACTTGGGAAGTCATGATAAATACT
TAACAATACGCAAAGGGAATATGCCCGGTTTTGATGGTATCAGGATTGGC
TATATTGTGatcagTGCGAATGGTATGTTAACGATGAACAGAGATCCCAA
ACCAACTTCTTCCAAATATTACAATTCCAACAATATTATTCTTGGTTATG
TACAACCTAACTGGGTGAACTTTAATAACAAGGATGCCACTTTCGTGCGA
GAAATAGCCAGAAACAGTATGAGAAACGTACACGACCGAATCACTCTTGA
TATGTTGAACAACGCTGTTAACAAATATAAAACTTTACGACAAGAAAACA
GTGTTACGCAACCATTCAACGGTAACCACGCCGTTGTCATTACGTTTAAC
ACAATCAACGGCGTACATTATCAGTACGGGTTGATTTCCAATGGTAGTGA
AACACACGTGGTTATGAACTTCCTCTCAGTTGGTGGTTACGGGTTTCATG
GTGTTTCGAACCCTGCTTGTACAAAATATAGTATGACGTCATACATATCC
TCATTCCAAGAAGCCACAACTTTTCTTCTGGATGGATCAAATACTGGAGT
CAAAGGACAATATGTTTACCCTATCACTCATAGGATTTGTGAAGAGCTGA
GGCCAAAGCCACCTCCACCGCCAATGACGCCCACTACAACAACCGCCACT
ATACCTTTCACAGCACCTCTTTTACCGAAATCGACCGAAAGTCTTTTCTC
CACAACCACGTCTCACACTACGGTGATAACAAAAGATAGCTCAAAGGAGA
GTCAAGCTGGAGGGCCTGAGCCTAGTGAAAAAACATCTCCAGTTACAAAT
GACCAGGGAGATTCCTCTTCGAACCAGATGCCAATTATAATCGGGGCGGT
AGTGGGTGGTAGCGCCCTTTTGGTTTTGGTTACGGCTGTGGTGGTAGTGT
TGAAGAGAAGATCTGCCCGAATGCAAGGCTATTCATGATGTTGTTTATAA
CTTCTCGTACACTTCTTCAACGATTTTATACTTTGCGATCATTTTTGGTT
TTCTTGAGAGAAGAATTTTGATTATCCAAAGGCCAATTGATATTtgttta
aaagtgaaaaatcatcTTCATATTTTGATGGCATTGGGGAATTCCCCGAG
TTGTTTGAATCTGAGTGGCCTGGGTGGGGTAGGGCGGTGCGAAGTGGTTT
AAATTTCTCacaatacagttgacgctcttcaATTCAACGTTCTTCTAATA
GATATACGCTCCATTAtgcgataatattgaaagctaCTGTCAGAAAGAAA
CCCTCGTTACCAACGCTCTACAATTCGATACGCTCCtttattcgataaaa
atccaATTCTTTTAGAATCGATTTAGAGAGCGTCGACTGTATATATGTAA
ATAcgctttaaag
Run BLAST on NCBI

transcript from alignment at scaffold_222:242891..254742-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052961 ID=TCONS_00052961|Name=TCONS_00052961|organism=Clytia hemisphaerica|type=transcript|length=11852bp|location=Sequence derived from alignment at scaffold_222:242891..254742- (Clytia hemisphaerica)
TTCTTGTCATTGGATGAACAACCGGTAGACGAAATCGTTTGGTATCCTTA
CAATAAAACAAAAATCATTTATGGTTACTTAACCAATCTACCGAGTAATG
TGTAAGATCATTTTAACGTATCAAAGTATTTATCCGACGGAAATTTGAAA
ACGGAAAACTCACGGCGTTGAATTCAGAACAGACAAGCTGCATAATCAAG
AAGGACATTTCACGACGGAAAACACACGAAGGACATTTCACAACGGAAAA
CACGCGACAGATAATTCACAATGGGAAACTCACGGTGGACAAACTTACGA
AGGACACCTCACGACGGAAAATAAACGACATAAAATTCACGACGGACATG
AAGGGTACCTCACGATGGTAAAACACACGACGGACAAACTTACGAAGGGC
ACCTCACGACGGACAAACTTACGAAGGGCACCTCACGACGGAAAACACAC
GACGGACAAACTTATGAAGGGCACCTAACGACGGTAAAACACACGACGGA
CAAACTTATGAAGGACACCTCACGACGGAAAAACTTACGAAGGATACCCC
ACGACAGAAAACACACGACGGACAAACTTATGAAGGACACCTCACGACAG
AAAACACACGACGGACAAACTTATGAAGGACATCTCACGACAGAAAATGC
ACGACAGAAAATTCACGACATAAAATTCACGACGGAAAACACACGTCGGA
CAAACTTATGAAGGACACCCCACGACAGAAACACACGACGGACAAACTTA
TGAAGGACACCTCACGATGGTAAAACACACGACGGACAAACTTATGAAGG
ACACCTCACGACAGTAAACACACGACGGACAAACTTATGAAGGACACCTC
ACGACAGGAAACACACGACGGACAAAATTATGAAGGACACCTCACGACAG
TAAACACACGACGGACAAACTTATGAAGGACACCTCACGACAGAAAACAC
ACGAAGGACAAACTTATGAAGGACACTTCACGACAAAAAAAAACACATAA
TTCACGAATCTCTCCCCCATTTTATTAAGCAACACTTCAATCACATCAGT
AAAAATACAGATAACTAAAAATCAGATAGAGCTTGGTTATTTCTTTGCAT
TGGTTAAAATTTACACATATCCTATTTAGTCCTAACGGTCTGTACCAATC
TGATATTTCATGTATACATTTAGCATTTATCTTTCTCGTTTAGCTTACAA
TTCCTACTGTCTGCTATTTACAGACAGTCCATCTTATAGAAAAGAGTACC
CCCACTCAATTCGATCACAAGTGCTAGTGCATGCTGTTTTAAGAGTTGTC
TGTTCTTTAGAAACTCCTATATTTGACATTGTTCTCATTCCAGGTACTAC
CACGAAACAAATGCACCGATATACTAGAAAAACATTTATGACTCTCATTG
GCTAAAAGTGCTTGCCATTTAGAAATTGTCTGTTTTTAGAATCTCCTATA
ATTGGGTCATTCTATTTTATATCCATACAGGGGGTGGACGAACATTTCCA
GAGGGTTATCCGAGAAAAATTTCAAGGGGGGCTTTTTTATTTTTCCAAGG
GGGTAAAAAGTTATTCTTAAATTTCCACGGGGTAAAAGACTGATTTCAGT
TCGTTCTCTTTCACTTTAAGGTATGAAAAGAATCCATTTTCCAGGGGGTA
AAGACACATTTTCAAAATAATTTTTTTTGATAGTAACGTAGAAAAAGATA
GTAACACCTCAATACCAACATCACATTTATTGTTAAAATTGATATTTTCT
CTATTATAGGTACTATCGCGAAACGAATGATACCGACATACTAGAAAAGT
ATTTATCAGAAAAGAATATCTTGACCACCATAGACAGTGTGGTAGTCATT
ACTTTTCATACGGACAAGAGAGGTGACATCCCAGGCTATCATCTTCACAC
CAATAACTTTCAAATTGTTTTGGGAAGCCGGTATAGAGATTCAGCCTATG
TTGGTTTCATGTAAGTAATATTTCATTTTTGTAAATTGTCTCTTCACAAT
TAGAGTGCTCGATACTATATACTGCGGAGCGAATAACCTTGTCAAAAGAA
ACATTATTTTTCTATTCAAATATACTTGTGTATTAAAAATTGACATTTTC
AAGACGACTCACTATTGAATTTAACAATCTTGTACAAATTTCCATAACGT
ATATTAATTTTCTAAAAATCCAGCTGAAAATTGCATCTATGCATGAAATC
AGTGGTATTGGAATAGAAAAATAATGTTTCTTTTAATAAAGTTAAGTAAT
TTTTGATATTGTAAAGTCTTTACGCAGTCTACAGTTGACTAGAATTTTTT
CATTCAATGATTTTCGAATCCTTTTAGAAAGTCCGTACAAAGATTGAACT
TATATGGCTTATATTGAATAGGGCTCTTCTTGCAAACAAAATTACATAGA
GGTTGAGGATTTAACATTTTTCAGGGTTTTTGATCACCCGGACTAGAGAT
TTCAACCCGGAAATCATACCGGTCAGTACTCTAAAGACCTAAATTTTACC
CACGCTCAAGGAAAACTGACAACTTGTTTCCTACCCCCGGCACAAAGTCA
ACCGCCCTTGTAATTTTTTTTGAAAACCTAAACCTTTGCAATAAGTATAT
GTAATCACATGATAACCAGTGCAATTCGAGAATAATTGCACGAGCGATTT
TTTTGTTATTAATTTTCGAAACAAAAAAATCAAGAGTGCAATTTTCGAAT
TATTATTATATGATTACGAGTTGATCGCACATTTTTTCACTACTTTTTCC
CCGGTAGGAAAGTAAATTAAAGAAATTACACTGAAAGTTTTATATTTTTC
TCTTCTCACTTTGTTTTTCTTTTATTGTTGTTTATGGATTTTCTCTCTCA
CAAAATGAATTTCGAATGCAATTAAAACGTTCGAAGAAAACAAATTGTAA
AAATTGGCGTGACATCGAAGAGTGTGATTAACGATTAATTGCTCTCTTTG
AAGGCGCGCCAAATAAGAAAAAATAACTCATCGTGCGATTAAGTCTTAAA
ACAATCTACAGATTGGTTGAGATGTTATAAGCATAAGGATCTCGTGAGTT
CCGTCCCAGACGATTGCCAGATGATGAAGAGAGGCCTTTCCGACTCGAAA
TTTCTACTTCTAAATTTGGAGAATCCAGGCTAATTCAAACTTCTCACTCT
AATGTTTTAAGCAACTATACAGCGTGTCCTGATAAAAACTGAACAAGATT
TATTTAGATAAAAAGCCATACAATTATCATTTGTATGATTTATTCCTTTA
GGTATTGAACCTATGAATTGAACCAATAAATTTTATTTTGTTACTATAAG
CTCCAGTGAGATATTTAGTTTTGACGGTTTTCCTTTTCTATAAAATGTGT
TCTGCCTTCTTATGGGACACACTGTAGTTAAATTGTTTTTCATAAGTGTT
TCTGTTTCATATCAGACACATATTTCATATCAGGACAGTGTCTACCTATT
GTTATATTATGCTGGTATAAGCAAAAAATGTTTTTCTTTTCCTCCTGACC
AATCTTGCTCCACATCTGTGTCAATCCAATGCGAAAAAGCTTGTGAATTA
AAATTGATGAGTAAGTAAACGACATCACTCTTTATTTTCAGATACCGCCG
TTTGGATACACTCTTCGGCGTTGTCGGTTTTTCGGTTCCAGGATGTTTCT
CTTATGAATTCACTAAACCCCTAGAAACACATTATCTACCAAGTCAAAAA
GGTGGCAAACAAGGTTTCTTTGGATCGTGGAGATGCTACGATTTCGAGAC
AGGTGTGAAGATTAATATTATATTAATTGGGGGACCAACATTGGGGTCCT
TTGACATCTTTTCTTCCTATGACCCGTGGGTGATGAAGGGAGTATTTTAA
GATTGACCTTGTTACATGTAGATGAGACCCTCCTCACTATATAAAAAGGA
CCAATCTTAAATTTAAGGTTAGCTTATTTTTCTCAGACAATAATTTTGAC
CCTTTTGATTTGTCAACGATGATGTTTAAATATGTCGTTCGAAGTAATCA
TTTCATTTGAAACCAAGGTCTGCTCCTGCTGATTTGTCTCGAGAAGTGTT
TTAATTCGTTATCTCTACTTTAACTCCAATTGAAACACCTTCCGGTTGAA
AAATTTCTTATTAAACCATGGAGATGAAATTCAAATTTTTCATTTGCTTA
TAGCTATGTTACCGAAGGGTATTCCAAGTGAAGTGGGATCACCTTTCCCG
ATTCATTTGAGTCTCTTTAACCTCTCAATGTCTCCCTATTAACTCGAACA
AGTTTTCTCATCCCTTCCGTTAATAATGTCTCATAAACCTCACTCCATAA
CTCAGAATTAGGACCTAGAACACGTTTTCACATAGCGTTTTCAAAAACCG
TATACCCCTGTTGATAGGAGGTCCATCCCTTTGTGGCTGAAGATGCTGTT
GCCCCCTGGAATTCCAGGCAATTCTAGGTTTAAACCCCTCTGGAATTTTG
AATTTTAAAAGGATTTAAAAAGCTACCCCCATGGAATTCCAGTTATTTTT
GACATATTTTTGTATCTCCCTCTGGAATTCCGCCACTTATCAAACCTTAC
CCCCCTGGAACGGAAATGGACCTCCTCAACAGGGGGTATACGGTTTCTTT
TTGGAAAAGCCCATTGGAGACGTAACGGCTTTCCTTTCTAATAGCAATGT
TACCGAACGGTATTCCAAGTGGTGATCAGTTTTACGGATTCAATTGAATC
TATAACTCGAATGCCTCCTTATCTCGAACAAGTTTTATGCTATTTTCTAT
ATAATTCGAAATTAGGAGTTTTTACATACCGTATTGGAGACGTATTTTTT
TAAATATATCGCCTGTCATTCTTTAATAGCAATGTTACCGAACGGGGTTC
CAAGTGGTGATCAGTTTTACGGATACCTGAATGACGAACTACACTTGGGA
AGTCATGATAAATACTTAACAATACGCAAAGGGAATATGCCCGGTTTTGA
TGGTATCAGGATTGGCTATATTGTGGTAAGTTTGTGGTGATGGATCTCAG
ATACTTATTTGAGAAATAGTATACCTCCTTTGATCTGATTGCTCGTAACT
CAGATAAAAGACACTTGTGTTACATCCGGACGTTTGGCATTGGAATGTGT
CGTAAAAATATTGTCTCCCAATATTGGCAACCGCGAAATTAAGTCCCTGC
GAAATCTTATAATTTCGCGGATGAGCTCAACCGCCAGAAAAAATATCCCA
TTGAAGTAATGGGTTGATGGCATAGATATCTTATATAAAACACTAGATAG
AGCTACTCTGAATTTCCCAAGCAACGGCAGGTGAAGCAAAATAATGCAAT
ATCTTTGCTGAAGTCACAGTAGGTCACAGTTCGGCACTAGCAACTTGTTT
AACCAAGCAAAAAACCTAAATGACGCGAAGCGACGAGGTGAAAGATAGAG
CTTGACCGATGAAATTGCCGGTAACGAACTATGGTCTACTTATCAAAGAT
GGTGGATTATTTTGAGCCCCTTTTGAGTCAAAAAGGGACGGATTAGTTCT
ATCTAGTGATTTATATAAGATATCTGTGGTTGATGGTACCAAATAATTCA
ATATATTTTCTTTTCTAGATCAGTGCGAATGGTATGTTAACGATGAACAG
AGATCCCAAACCAACTTCTTCCAAATATTACAATTCCAACAATATTATTC
TTGGTTATGTACAACCTAACTGGGTGAACTTTAATAACAAGGTTAGTTTA
CCATGATTAGTTTGCCAGGAAAATTGCACCCGGGAATCCCCCCACCCGGG
AAACTCATTTCCGGGGGCAATTTTCCCAGGGCAAATTTTCTAGAATCAGA
AAATATCAATTCAGCGTTTTGAATTTTTTGTACTATAGAAAATCTCTTGA
GCAATAATATGTGTTGATCCGGGCGAAAATGCGTTCACTTGCCAAGTGAA
TCGTTACACCGAGTGGTAACTGAACCCTGGTCTTTTCGTAGAAGAACCTT
ACACTTAGATTTTTTTGCACCTATTTAGGACGCCACTTTCGTGCTGGAAA
TAGTAAGATTCACATGCTGTTAAACTCTAGTTAAAGTTTAATGTTAGATA
CAGGCTTCATAGCAGAGCTTATACCATTATATATCATATAAATATTTTGT
TTTGCACGTTTTTAGGATGCTACCTCCGTGCATGTAATAGCCAGATTAGT
ATGTTAAGCTCTAGCTAAAGTTTATAGTATGGGGCCAAACCTTAGGATCC
GTGACAACTCTTCTAGGACGCAACCACATGAATTTCGTTCGAAAATTGAA
TGTATTTGAAGACATTTTCGCCAGGGGAGTCCGCTGCTAAGGCCTGGCAA
CATTCTTTATTGGCCAAAGACTGATGTTGCCGGCAAAACTTTAAAGGCAA
AAAATGGGTAAAAAAGTGACGATTTTTGAAAATCGTGTTCAACGGAAAAG
ATAGACTATGCTATAGTCTAAGGCGAGTTTCATCTAAGAGGAACAAACGT
GAAGACGGTAATTTTTTTCGGGGGTAGCTGTTGTCATAAGCACAGACTCG
CCGCGAAACATATTACGTTTTATAATATACAAACTATGTTATATCATAAT
AATATATTATATGGACGATAGCATCGTCAACGGAAACGATTGACACCATC
GTATAGGGCACGAAATTACTATTAATGTTTGATGCACGTTTTGTTTCATA
CATCCATAGGATGCCACTTTCGTGCGAGAAATAGCCAGAAACAGTATGAG
AAACGTACACGACCGAATCACTCTTGATATGTTGAACAACGCTGTTAACA
AATATAAAACTTTACGACAAGAAAACAGGTAATGGTTACAGGTGGAAATT
ATTAAAGCAGGCAAAAAATCGCTTTTCGCCGGGGATTAATTTTTGCTTTT
CGTCCTATTTTTTACACATTAGTTTCATTTTTCTAGGGAATTTTAAACTT
TTTCATGAAAAATGGCCGAATTTGTAAATCCTGGATTCTAATTTTCGCGG
TTTTGCCAGAGAGCCGTGAAAATAAGGGCCCTTACTGTAAGGTTACTCAT
TATAACTTTCGCATATTAAATTATTATGTTTTCTCGTTTTCAGTGTTACG
CAACCATTCAACGGTAACCACGCCGTTGTCATTACGTTTAACACAATCAA
CGGCGTACATTATCAGTACGGGTTGATTTCCAATGGTAGTGAAACACACG
TGGTTATGAACTTCCTCTCAGTTGGTGGTTACGGGTTTCATGGTGTTTCG
AACCCTGCTTGTACAAAATATAGGTATAGATTTTCAGTGTAATACAGCCT
TTCATGGTTACGGGTTTCACGGTGCTTCGAACCCTGCTTGTACAAAGTAT
AGGTAAAGATTCTCAGTGTAATACAGCCTTTCATGGTTACGGGTTTCATG
GTGTTTCGAACCCTGCTTGTACAAAGTATAGGTAAAGATTTTCAGTGTAA
TACAGCCTTTCATGGTTACGGGTTTCATGGTGTTTCGAACCCTGCTTGTA
CAAAGTACAGGTAAAGATTTTCAGTGTAATACAGCCTTTCATGGTTACGG
GTTTCATGGTGTTTCGAACCCTGCTTGTACAAAGTATAGGTAAAGATTTT
TAGTGTAATACAGCCTTTCATGGTTACGGGTTTCATGGTGTTTCGAACCC
TGCTTGTACAAAATATAGGTATAGATTTTCAGTGTAATGCAGCCTTTCAT
GGTTACGGGTTTCACGGTGCTTCGAACCCTGCTTGTACAAAGTATAGGTA
AAGATTTTCAGTGTAATACAACCTTTCATGGTTACGGGTTTCACGGTGCT
TCGAACCCTGCTTGTACAAAGTATAGGTATAGATTTTCAGTGTAATACAG
CCTTTCATGGTTACGGGTTTCACAGTGCTTCGAACCCTGCTTGTACAAAG
TATAGGTAAAGATTTTCAGTGTAATACAGCCTTTCATGGTTACGGGTTTC
ATGGTGTTTCGAACCCTGCTTGTACAAAGTATAGGTAAAGATTTTCAGTG
TAATACAGCCTTTCATGGTTACGGGTTTCATGGTGTTTCGAACCCTGCTT
GTACAAAGTATAGGTAAAGATTTTCAGTGTAATACAGCCTTTCATGGTTA
CGGGTTTCATGGTGTTCTGAACCCTGCTTGTACAAATACAGGTAATACAG
CTTTCCATGGTCATGGCTGTCACTGAACTCATTTTGAACTCACCTCCCAG
CTGGCACACAACGTTGTTTTAACGTTCAAATAACGTTTTTTTAACATTAT
GAATGTCAAATGAACGTTGTTTTGACGTTGTCTGTCGGCTGGGCTCCTTC
TTATGAGGTAATCTATGTTCAAAAATTTAAGTAAGAGCTGTTTATGTTTA
ACTAAGGCAGTATGCTTTTAGAAATTACTAAATGGGGGACTCAATAATGA
CGGGTGGGGCAGCTCCCTTGTTAGATTCCAACCCCTCCCACCCGTCATTA
TTGGTACTTACTGGTGGGGTGGAGGTCCTTTAAATTAACCTTTGTCCGTT
CGTTCGTCCGTTCGTTATTAGCTTTCCTCGTGATTGGCTTATTAGTTTTT
TCTGATATTTTGCACAAAGATGTATAACTATAAACCCTCGAATGTGACGG
AGCCCGATTTTCGAAAAAAAAAATTTGGGGCAAATTTGGGCCAAAAAACG
GCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATTGTTAACTTT
TTCTGATTTTTTTGCATGAAAGTAGGGTACCATCAAATTTTTTCAAAAAA
ATTTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTGAT
AAGCATACATCAATGTTCTTAGCCAAATTACTTAATTTTTTGATGAGATA
GATGTTTTTTGCTCACAAAGTCTTGAATATGAAAGAATATTTCAAGAGCA
TGAAATTTTGTTTTTTTTTTAACGTTTTTTTTATGAGAAACAAACTACTA
ATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTTA
CGCTCACGTAGATATCAATTATATATGTGTTAAATGCATAACTAGGTAGG
TCAATAAAAGCATCACTTGTTTATTTTGGAGAAAATCCAGTTAACCATTC
CGAGTCAAAAACATATAAATAATATGCTTAGCCTCGGTGTCTACTACAAA
AGGGTAAATACCATTGAGTTTAAAGCCCGAAGGGCTAGAGTTCAATCTCT
AACCTTTCTCAGGCAAGAAAAAGTGAAGCCTTAAAAAATGCGCCGCATTT
TTGACGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGTGAATCTAGCAATTCCTTTGTTTACGATTGATATTTTTTTCGAA
ATTTAGCGATAAATTTTAGTTTCAATCTGTCATTTGTGTAAAAACTAGGC
GAGCCGCTCAAGGCCGCGCAACTTTGGTAGGATTTGTTGGCTTCAAATCC
TACCAAGGAGACTTCTAGCCCTTCGGGCTTATACTTCATTGGTAAATACT
ATCTATCTAATATTACTAGGGTAAATCTTCTTTTTTGTTTTCTTCGTTCA
TAGCTCTGAATACGTTTTTCATAAAAACATATAAAACAAGTTACAAATAA
CAACAACAACAAAACAAGATTCCTTTTTTTCATATTCAGTATGACGTCAT
ACATATCCTCATTCCAAGAAGCCACAACTTTTCTTCTGGATGGATCAAAT
ACTGGAGTCAAAGGACAATATGTTTACCCTATCACTCATAGGATTTGTGA
AGGTAACAGTATGGTAAAGTTTAGTGTACCAGTAGCATTGTTGACAAGAG
GGNTTACCCTATCACTCATAGGATTTGTGAAGGTAACAGTATGGTAAAGT
TTAGTGTACCAGTAGCGTTGTTGACAAGAGGGGCGTAAGATTTGTGTAGG
AGAGCGGATTTTTATGTCACAGTAATTATCTATTCATAATTCGAAAAGGT
AATTACCGTGTCATAAAAATCTGCTCTCCTACACAAATTATGCCCCCTCT
TAACTACGCCATTGTAACAACAATTAAAGGGATAATCGCATGTTTTGAGA
TATTTCAATAGACCTTTTCATAAATGACGTCACGGGAATATTACAATCGA
AATCTCTTAGGAATTCCTCGAGGCAATTCTATTGTAATACTACTGAAACA
ATCCCACAATGCATCGCTTGTTTTACGTTTTCCAAAATCTAGAATAAAGA
CCCGCAGAGTCTGTAAATAGTTTAATGGGAGAATCAGAGAATTTGATCTG
TGTTTTTTTTAGAGCTGAGGCCAAAGCCACCTCCACCGCCAATGACGCCC
ACTACAACAACCGCCACTATACCTTTCACAGCACCTCTTTTACCGAAATC
GACCGAAAGTCTTTTCTCCACAACCACGTCTCACACTACGGTGATAACAA
AAGATAGCTCAAAGGAGAGTCAAGCTGGAGGGCCTGAGCCTAGTGAAAAA
ACATCTCCAGTTACAAATGACCAGGGAGGTCAGTATTTGGGACCCACACC
GTCGGGAGGCCAGGGCCCATGGTCCAATCGCTATTTTTCAATCAAAATGT
TATTTTAAGGAGATCATGGTTCATTACTTTCAATAGTTTCGCTTCTGCGG
GTAAAGTAAGTCTGAAATAACATCATTTCAAGGTTTATTGGAGACTCACG
CAATCAAAATGTTCCATGGTTTCCTGAGTCGCTATATTTTAACCCGTCCA
CTTTCCAGATCATGACATGGGCCCTGGTATTTCATAGATTTTCTCCTCCT
TTTCTCCATCTGTTGACAAATTAAAAATAACAAAGGAATTACTCAAAATA
CTCGTGTTCACGGTGCGGGAGGAGGAGAAAGTTGTTTCTTCAGTTTAAAA
AAAACTTTGTAAGCAAGTTGTAGGAGATGTGTTGAAATGATGTCCTTTAA
AATGACCTTCTTCCATTCTTAGAGAAATTCTATTTGGCTAGATTGAAAAA
AAATTTGGCAAAGGCCCGCTAAACCTGGTATTGTAATCACACCTAATAGG
AATCTTGAAATTCATTATTTATTTTTTCATAGCTGACGCTATGGTCAGGC
CTATAAAATTTTAAATAAAGGCGGACGTAAAAAAAGCAGAAAACGCGAGG
GCTGTCGTAAAAAGGGCAGATAAGTTAAGGGCCGACATAAATAGGACAGA
TAAGTTAAGGGCCGACATAAATAGGACAGATAAGTTAAGGGCCGACATAA
ATAGAGAAAATAAGGTATTGGCCGATGTAAAAAAGGCCGATATAGCAATA
CTATTATCTTCTTGAAATTCAACCCAAGATTCTTCTTTGTTCGTGTCCGA
TTTTCTTGATAATTTTATTTACAGTATTAATCATTTCATCTCTTCTCAGA
TTCCTCTTCGAACCAGATGCCAATTATAATCGGGGCGGTAGTGGGTGGTA
GCGCCCTTTTGGTTTTGGTTACGGCTGTGGTGGTAGTGTTGAAGAGAAGA
TCTGCCCGAATGCAAGGCTATTCATGATGTTGTTTATAACTTCTCGTACA
CTTCTTCAACGATTTTATACTTTGCGATCATTTTTGGTTTTCTTGAGAGA
AGAATTTTGATTATCCAAAGGCCAATTGATATTTGTTTAAAAGTGAAAAA
TCATCTTCATATTTTGATGGCATTGGGGAATTCCCCGAGTTGTTTGAATC
TGAGTGGCCTGGGTGGGGTAGGGCGGTGCGAAGTGGTTTAAATTTCTCAC
AATACAGTTGACGCTCTTCAATTCAACGTTCTTCTAATAGATATACGCTC
CATTATGCGATAATATTGAAAGCTACTGTCAGAAAGAAACCCTCGTTACC
AACGCTCTACAATTCGATACGCTCCTTTATTCGATAAAAATCCAATTCTT
TTAGAATCGATTTAGAGAGCGTCGACTGTATATATGTAAATACGCTTTAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033446XLOC_033446Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052961-exon-scaffold_222-1575043694:254642..254742TCONS_00052961-exon-scaffold_222-1575043694:254642..254742Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:252783..252983TCONS_00052961-exon-scaffold_222-1575043694:252783..252983Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:250991..251151TCONS_00052961-exon-scaffold_222-1575043694:250991..251151Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:249768..249913TCONS_00052961-exon-scaffold_222-1575043694:249768..249913Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:249052..249174TCONS_00052961-exon-scaffold_222-1575043694:249052..249174Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:247965..248083TCONS_00052961-exon-scaffold_222-1575043694:247965..248083Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:247520..247699TCONS_00052961-exon-scaffold_222-1575043694:247520..247699Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:245041..245153TCONS_00052961-exon-scaffold_222-1575043694:245041..245153Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:244315..244530TCONS_00052961-exon-scaffold_222-1575043694:244315..244530Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1575043694:242891..243443TCONS_00052961-exon-scaffold_222-1575043694:242891..243443Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:254642..254742TCONS_00052961-exon-scaffold_222-1510915933:254642..254742Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:252783..252983TCONS_00052961-exon-scaffold_222-1510915933:252783..252983Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:250991..251151TCONS_00052961-exon-scaffold_222-1510915933:250991..251151Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:249768..249913TCONS_00052961-exon-scaffold_222-1510915933:249768..249913Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:249052..249174TCONS_00052961-exon-scaffold_222-1510915933:249052..249174Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:247965..248083TCONS_00052961-exon-scaffold_222-1510915933:247965..248083Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:247520..247699TCONS_00052961-exon-scaffold_222-1510915933:247520..247699Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:245041..245153TCONS_00052961-exon-scaffold_222-1510915933:245041..245153Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:244315..244530TCONS_00052961-exon-scaffold_222-1510915933:244315..244530Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1510915933:242891..243443TCONS_00052961-exon-scaffold_222-1510915933:242891..243443Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:254642..254742TCONS_00052961-exon-scaffold_222-1491911889:254642..254742Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:252783..252983TCONS_00052961-exon-scaffold_222-1491911889:252783..252983Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:250991..251151TCONS_00052961-exon-scaffold_222-1491911889:250991..251151Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:249768..249913TCONS_00052961-exon-scaffold_222-1491911889:249768..249913Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:249052..249174TCONS_00052961-exon-scaffold_222-1491911889:249052..249174Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:247965..248083TCONS_00052961-exon-scaffold_222-1491911889:247965..248083Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:247520..247699TCONS_00052961-exon-scaffold_222-1491911889:247520..247699Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:245041..245153TCONS_00052961-exon-scaffold_222-1491911889:245041..245153Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:244315..244530TCONS_00052961-exon-scaffold_222-1491911889:244315..244530Clytia hemisphaericaexon
TCONS_00052961-exon-scaffold_222-1491911889:242891..243443TCONS_00052961-exon-scaffold_222-1491911889:242891..243443Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:242891..254742 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.59906	2.45603	3.11094	3.27226	3.16458	2.89909	4.42918	3.31875	1.86163	4.2532	0	0	0	0.0298249	0.634816	1.56293	0.134467	0	0	0	11.415	8.23988	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052961 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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