TCONS_00053073 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053073
Unique NameTCONS_00053073
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1383

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053073 ID=TCONS_00053073|Name=TCONS_00053073|organism=Clytia hemisphaerica|type=transcript|length=1383bp
ATTGAACAAAAGTTCAAACATCTCGAGAGTCACCTAAACGTGTGTCCAGA
AATGATGGTTGATTGTAAAAATCCTGAATGCCAAGTGCGCATGTTCAGAA
AAGAGGTACCACttcatttgaaaaatgaatgCCTATATGAACCAGTTAAA
TGCAAATTCGCTTCACTTGGCTGCACTGGGATGATTCAATGGATGGACAA
AAAAACACACGATCAAGAATTCGCAGCGATTCATAACAAAATGCTACTCG
AAAAGCATATAGAGACTTCAAGGGAGCTACATCAAACTCGAGATGAGATG
AAAGACATGAAGTCAAAGATAAATTCCTTAATTGGTTTCAAAGAAAACCA
AGCAGAGATAAGTGATGCTTACTCTCTGATTAAGGAAACTGAAGCCGAGT
TAATAGCCGTGAAAGCCGAGTTACAAAAAACGAAGACCGAGTTAACCTCG
ACAAAGATAGAAcacttgaaaacaaagaatgAGCTTCAAGAAGTTCGAAT
AGAGGTAGCAGATCTCAACAATCATTGCAATCAGCTTTACCAGCTAGTCG
AACATTCGTCTGATATCGTGTGTAGCCATCTACTCAACGAAAAAGAATCC
GAAATtgtatttgaaaacaaaacttttgaaaatttggtgcCCTTACTAgt
taaaaagaattatttagCACTGGCAAAATCACAGAATCTACACTATGATA
AAGCTGCTGCAGTCTTTGGCGAACAAGAattcaaattcaacaaactGAAT
GTGATTAATAATTTTTATCCTTACGAATACGTGTATAAAACACTTCTCTC
CATCATGGATGTAGGAGATATTCACCAAAGGTCaacaaatgaattttttt
tcaagttcaatatCTTAGACTATGAATCAGTTTATGCTGATTTTGGAAAT
GTTGAATTTCTAGCAAGTCGCCGAAAGTCAGGTGATGTAGCATATATaaa
taagaactttttattGGTAGCTGAAAATTCGAACCGTTGTTCACTTCGCT
TTCAAATTGAAGGCTTCGATGAGGAAAATTCAAAACTATACATTTTAAAT
CCGAAATGTTTCCAACGAAGattattgatttttgattgGAACGATaaaat
aacagaaaaaaatgattctgGGGAGgtcttattttatttagtaaGAAATt
gacacattttattttcagtgTGCTATTTTTGGAGTTATGTATTTTGGAGT
TAGTTtatctaatgtttccagctcacccaaatagagacttatacgttgtt
ttttttaagaaactagtttaaCCAAGCaacctcaatgtttcttaagaaat
cagccttttgagccttaaatgtttcttacatgtttctaaactttttgaca
taatcagcctatttttcatgttttgattggaag
Run BLAST on NCBI

protein sequence of TCONS_00053073-protein

>TCONS_00053073-protein ID=TCONS_00053073-protein|Name=TCONS_00053073-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
IEQKFKHLESHLNVCPEMMVDCKNPECQVRMFRKEVPLHLKNECLYEPVK
CKFASLGCTGMIQWMDKKTHDQEFAAIHNKMLLEKHIETSRELHQTRDEM
KDMKSKINSLIGFKENQAEISDAYSLIKETEAELIAVKAELQKTKTELTS
TKIEHLKTKNELQEVRIEVADLNNHCNQLYQLVEHSSDIVCSHLLNEKES
EIVFENKTFENLVPLLVKKNYLALAKSQNLHYDKAAAVFGEQEFKFNKLN
VINNFYPYEYVYKTLLSIMDVGDIHQRSTNEFFFKFNILDYESVYADFGN
VEFLASRRKSGDVAYINKNFLLVAENSNRCSLRFQIEGFDEENSKLYILN
PKCFQRRLLIFDWNDKITEKNDSGEVLFYLVRN
Run BLAST on NCBI

transcript from alignment at scaffold_225:195715..200506-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053073 ID=TCONS_00053073|Name=TCONS_00053073|organism=Clytia hemisphaerica|type=transcript|length=4792bp|location=Sequence derived from alignment at scaffold_225:195715..200506- (Clytia hemisphaerica)
ATTGAACAAAAGTTCAAACATCTCGAGGTATTGAAGATTTTACGCACACC
CAAAAGTGCCACAAGTGATTAGCGTGAATAGGATATTGTTCTTACGTCTT
TGTTGTTGATTGTAAATTATATTTGGCGTCATGAAGACTTTGTCGCTATT
TTTGCGTAATGGGCTTTTCCAAAAATAGTCCGTGCCCCCTGTTGAGGATA
TCAGATATCCAGGGGGTTGAATATCTACATAGGAGCGGATATCCAGAGGG
TAAATTGTCTTTTCAAGTAAAAAATACGATATCCAGCGGTAAGTATCTTT
ATAAGAGAGGATATCTAGGTGGTTGAGCATAATTTTAAGAGTGGATATCT
AAGGGGTCTTTACTAATAAAGTAGGATATCCAGGGGGTTCGATACTTTGA
AAGATCGATATCCTCAACAGTGGGGGTAAAATCATTTTCTGGAAAAGCCC
AATGGACCAATTTTGGCAGTTTTCGTAATCGTAATGAAAGCATTCCCCAT
TGGTGTTCTATTTTGGAATAGAAAGAATACTACTATAGGAGGTGATGATG
CAGGAATGTAATAGATTTTAACCCATATCTGATGTGACCTGTATTTGCAA
CTCCTCTCAAATTACTTCTCCAATTCAAAGTTTTTGATATAGTTTTTATA
GATGTAATCTTTTCCCTCGAATTCGACTTAAGTAACAAAACGTAAATTTT
TTACTTATTGTAGGGGTACCGAGTCTCACCCGTAACGTCATTCTAGTGGG
GGGGGGGCGTACGGGACTTCGTAATACCGATATACCGATAATTTTTTCGT
TCAAATACCGATACCGATCAATTTTTCCCCATTTTTTAGGTACTAGTCCC
CCGGAGGGGGTACTTAGGCAAAAATGGGTGCTTGGTATGTGTGGACGATA
AAGGTCGGGTTTTCATCATCCAAAATTCTCTATAACAATTACCAAACTGT
AGCGTGTTGGGTAGATACAGGCTGGTAAGTAAAAGTAGAATTTTGGCATA
AGGTGCCCCCTTGTAGGCTTATTCTGGCGCCCCTTTTGGTCGCATTGGTA
TACCGAAATTTGAACTTAAAATTTAGGTCATTTTAGAAACATTTAGGAAA
TGCGAGCGAAGCGAGCAAGAAAAACTTGCGATATTGTTCATCAAGATGGA
TTGACTAAAGCCTTGCAGAGGCGTAGCCACGAGTTTTCGTTTCGGGGGGG
GGGCGAGATTGGAAAAATTTTGACCTTTTTTAGGGGAATTTTTCAGAGAA
AGTGTTTTCAGAGTAAATTTTTGCTCTAAACAAGCTCAAAGTTAGCGAGA
ATAAGGTCACAAAAAGTGTAGAAAGCATAAAATTTCATGTCGTAGAGAGT
TTGCTTTGTAATCTTGGCGCCACAGGCGAAAATTTTGGTCTAAGAAATAT
CAAACAGCTTAAAGGAGGCCTTAAAAAGGTCAAAGGTAGCCAGAAAAAGG
TCACGAAAACTACAAACCCCTTCACATTTTGTTGGGAAAACTTTGACCTT
TTTGGTCAATTATTTTTTTCTTTGGTGGGGCCGATCAATTACAGTTTTTT
AGGGTAACTTCAAGATTTTGGCGTTCAAATAAGCTCAACTTGGGGAGGCG
TGGCCCCCTGTCAAAACGCCAATGGATCGAAAATGGGAGCTTATCAAAGA
GTAGAACGTCAATTTAGAGAGCGTCAACTGTATTCACGGCAGAAAAATGG
TCATTCACGTGTCTACCCCCTGAGCCTCTTGCCTTATCAAAATTGCAGCA
ATGATTTTTCAAATCGGCGCCCCTGAGTGTTCCTTAATTTGTACTAATTT
ACGTATGAGGGAGGGATTATTTAGTAGATCAGCGCTCAGAACATATCGTT
CATATATCCGAATAGTAAAGGAGGCTTTGGCCAAATAGAAAATTTTTGAA
AGTCAACCAAATAACATAAACTCTAAAAAAGCCATGAATTTGATACTTAT
CACGAAGATATCGAAGAAGCTAGTGCGAACAAAGCGAGCAAAAAAAATTA
AATTTTTTGTTTTAAATTTTGTGTTCGCTAAATACACTCTTCTCGAGAAA
GCATTGCTGGCCTCGTTCGCAAGCAGAATAGTTATTCAACATCAGTTATC
TGTTTTAAAACAAAAGCACGCACATTTACAAAAGAAAATTACATGTCAAA
TGACGTTGAGTTACTTAGGCAACAATATTTGAAAACGAGGCTTGCAATGC
TTATTTATGCATCTCGAGGAGAGTGTATTGGTAGATTGTTAAAGAACTTT
ATTGCGAGCGAAGCGAGCGAAAAAAATTGCAAGTTTTTAAAATTTATCTC
ACATAATTTGGTCTTGGGGCACAATGGCTCATGATCTTTGATACCGATGG
TTGACCGAAAATACCAAAATACCGACATAAAAATGGGTCTTTTACCAATA
CCGAGATGATTTGGAAATACCGAGTACCGATCATTTTTTTCCTGTAATAC
CGATTTACCGATCTACAAAAAGGCCAATACCGATGTACCGATATCCCGTA
CGCCCCCCCCATTCTACTAATGTAAATAATGAAAAGTGATAAATCTTTAT
TTTTAAGATGTTGTTTCTTTGTCTTTTACATCACAGAGTCACCTAAACGT
GTGTCCAGAAATGATGGTTGATTGTAAAAATCCTGAATGCCAAGTGCGCA
TGTTCAGAAAAGAGGTAAACACGATTCATTATAATCATTGGCATATGAGT
TCCAGTCTTCTGTAGTTGTTCTGGAATCGGGTAATACTAAAACACACAAC
GAGCCAGAAAATGACACAACGACCCACAAAGAGCCAAAACAAGCCAGAAA
ATGGCACAACGAGGCCATAATGACCCACAACGAGTCACAACGAGCCAGAA
AACGACACAACGAGCCACAACCCCATTTTCTGGCAGGCTCGTTGNCTCGT
TGTGGCTCGTTGTGCCATTTTCTGGCTCGTTGTGTGTTTTAGTATTACCC
TTTTGGAATCATTTTACTCTAGGATTCTAGTAAGTACTCTATAAAATTAT
CATGTATATAGTTTGTTAAAATTGAAGCATTCGTTGAAAAATAACAAACA
AAATAACAATTGGGCACAATTAAAGCTAATCGTGGACTTTATATATAAAA
ATAACTCTCGATTTTTCTTAAAAATTAGTACTGAAAATGACTGGGATATT
GCAATCTTCTGGACACTGATTAAAAGAGAGTTTCATGTTGTATATTTCAG
GTACCACTTCATTTGAAAAATGAATGCCTATATGAACCAGTTAAATGCAA
ATTCGCTTCACTTGGCTGCACTGGGATGGTAAGACGTCAACAGCCTAACT
TTGAGTAAAACAGGATGTGCTAAAATGTTTAAGGTTAAAACGACTTCAAT
CTTGCTATAGTCTACACAACAGACAGTTACAGGCTTTAGGCCTTCCTATC
CCGAAGAGGAGGAGTTTTACACTTGGAGCGAAGGCAGATATGACGTAGCT
TAATTTTACTAGAGCAAGAAAATGGAAAAACTGATTTGAGGAAAACTTCG
TCGTCTTTCCCCTCCTTGAAGTTGATCAAAAATATTTTTAGGGGGGGGGA
CTTTTCTGTTTCAAGGTATATTAAATGCTTTTTTCTTCACAGATTCAATG
GATGGACAAAAAAACACACGATCAAGAATTCGCAGCGATTCATAACAAAA
TGCTACTCGAAAAGCATATAGAGACTTCAAGGGAGCTACATCAAACTCGA
GATGAGATGAAAGACATGAAGTCAAAGATAAATTCCTTAATTGGTTTCAA
AGAAAACCAAGCAGAGATAAGTGATGCTTACTCTCTGATTAAGGAAACTG
AAGCCGAGTTAATAGCCGTGAAAGCCGAGTTACAAAAAACGAAGACCGAG
TTAACCTCGACAAAGATAGAACACTTGAAAACAAAGAATGAGCTTCAAGA
AGTTCGAATAGAGGTAGCAGATCTCAACAATCATTGCAATCAGCTTTACC
AGCTAGTCGAACATTCGTCTGATATCGTGTGTAGCCATCTACTCAACGAA
AAAGAATCCGAAATTGTATTTGAAAACAAAACTTTTGAAAATTTGGTGCC
CTTACTAGTTAAAAAGAATTATTTAGCACTGGCAAAATCACAGAATCTAC
ACTATGATAAAGCTGCTGCAGTCTTTGGCGAACAAGAATTCAAATTCAAC
AAACTGAATGTGATTAATAATTTTTATCCTTACGAATACGTGTATAAAAC
ACTTCTCTCCATCATGGATGTAGGAGATATTCACCAAAGGTCAACAAATG
AATTTTTTTTCAAGTTCAATATCTTAGACTATGAATCAGTTTATGCTGAT
TTTGGAAATGTTGAATTTCTAGCAAGTCGCCGAAAGTCAGGTGATGTAGC
ATATATAAATAAGAACTTTTTATTGGTAGCTGAAAATTCGAACCGTTGTT
CACTTCGCTTTCAAATTGAAGGCTTCGATGAGGAAAATTCAAAACTATAC
ATTTTAAATCCGAAATGTTTCCAACGAAGATTATTGATTTTTGATTGGAA
CGATAAAATAACAGAAAAAAATGATTCTGGGGAGGTCTTATTTTATTTAG
TAAGAAATTGACACATTTTATTTTCAGTGTGCTATTTTTGGAGTTATGTA
TTTTGGAGTTAGTTTATCTAATGTTTCCAGCTCACCCAAATAGAGACTTA
TACGTTGTTTTTTTTAAGAAACTAGTTTAACCAAGCAACCTCAATGTTTC
TTAAGAAATCAGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAAC
TTTTTGACATAATCAGCCTATTTTTCATGTTTTGATTGGAAG

Coding sequence (CDS) from alignment at scaffold_225:195715..200506-

>TCONS_00053073 ID=TCONS_00053073|Name=TCONS_00053073|organism=Clytia hemisphaerica|type=CDS|length=4608bp|location=Sequence derived from alignment at scaffold_225:195715..200506- (Clytia hemisphaerica)
ATTCAATGGATGGACAAAAAAACACACGATCAAGAATTCGCAGCGATTCA
TAACAAAATGCTACTCGAAAAGCATATAGAGACTTCAAGGGAGCTACATC
AAACTCGAGATGAGATGAAAGACATGAAGTCAAAGATAAATTCCTTAATT
GGTTTCAAAGAAAACCAAGCAGAGATAAGTGATGCTTACTCTCTGATTAA
GGAAACTGAAGCCGAGTTAATAGCCGTGAAAGCCGAGTTACAAAAAACGA
AGACCGAGTTAACCTCGACAAAGATAGAACACTTGAAAACAAAGAATGAG
CTTCAAGAAGTTCGAATAGAGGTAGCAGATCTCAACAATCATTGCAATCA
GCTTTACCAGCTAGTCGAACATTCGTCTGATATCGTGTGTAGCCATCTAC
TCAACGAAAAAGAATCCGAAATTGTATTTGAAAACAAAACTTTTGAAAAT
TTGGTGCCCTTACTAGTTAAAAAGAATTATTTAGCACTGGCAAAATCACA
GAATCTACACTATGATAAAGCTGCTGCAGTCTTTGGCGAACAAGAATTCA
AATTCAACAAACTGAATGTGATTAATAATTTTTATCCTTACGAATACGTG
TATAAAACACTTCTCTCCATCATGGATGTAGGAGATATTCACCAAAGGTC
AACAAATGAATTTTTTTTCAAGTTCAATATCTTAGACTATGAATCAGTTT
ATGCTGATTTTGGAAATGTTGAATTTCTAGCAAGTCGCCGAAAGTCAGGT
GATGTAGCATATATAAATAAGAACTTTTTATTGGTAGCTGAAAATTCGAA
CCGTTGTTCACTTCGCTTTCAAATTGAAGGCTTCGATGAGGAAAATTCAA
AACTATACATTTTAAATCCGAAATGTTTCCAACGAAGATTATTGATTTTT
GATTGGAACGATAAAATAACAGAAAAAAATGATTCTGGGGAGGTCTTATT
TTATTTAGTAAGAAATTGAGTACCACTTCATTTGAAAAATGAATGCCTAT
ATGAACCAGTTAAATGCAAATTCGCTTCACTTGGCTGCACTGGGATGAGT
CACCTAAACGTGTGTCCAGAAATGATGGTTGATTGTAAAAATCCTGAATG
CCAAGTGCGCATGTTCAGAAAAGAGATTGAACAAAAGTTCAAACATCTCG
AGATTCAATGGATGGACAAAAAAACACACGATCAAGAATTCGCAGCGATT
CATAACAAAATGCTACTCGAAAAGCATATAGAGACTTCAAGGGAGCTACA
TCAAACTCGAGATGAGATGAAAGACATGAAGTCAAAGATAAATTCCTTAA
TTGGTTTCAAAGAAAACCAAGCAGAGATAAGTGATGCTTACTCTCTGATT
AAGGAAACTGAAGCCGAGTTAATAGCCGTGAAAGCCGAGTTACAAAAAAC
GAAGACCGAGTTAACCTCGACAAAGATAGAACACTTGAAAACAAAGAATG
AGCTTCAAGAAGTTCGAATAGAGGTAGCAGATCTCAACAATCATTGCAAT
CAGCTTTACCAGCTAGTCGAACATTCGTCTGATATCGTGTGTAGCCATCT
ACTCAACGAAAAAGAATCCGAAATTGTATTTGAAAACAAAACTTTTGAAA
ATTTGGTGCCCTTACTAGTTAAAAAGAATTATTTAGCACTGGCAAAATCA
CAGAATCTACACTATGATAAAGCTGCTGCAGTCTTTGGCGAACAAGAATT
CAAATTCAACAAACTGAATGTGATTAATAATTTTTATCCTTACGAATACG
TGTATAAAACACTTCTCTCCATCATGGATGTAGGAGATATTCACCAAAGG
TCAACAAATGAATTTTTTTTCAAGTTCAATATCTTAGACTATGAATCAGT
TTATGCTGATTTTGGAAATGTTGAATTTCTAGCAAGTCGCCGAAAGTCAG
GTGATGTAGCATATATAAATAAGAACTTTTTATTGGTAGCTGAAAATTCG
AACCGTTGTTCACTTCGCTTTCAAATTGAAGGCTTCGATGAGGAAAATTC
AAAACTATACATTTTAAATCCGAAATGTTTCCAACGAAGATTATTGATTT
TTGATTGGAACGATAAAATAACAGAAAAAAATGATTCTGGGGAGGTCTTA
TTTTATTTAGTAAGAAATTGAGTACCACTTCATTTGAAAAATGAATGCCT
ATATGAACCAGTTAAATGCAAATTCGCTTCACTTGGCTGCACTGGGATGA
GTCACCTAAACGTGTGTCCAGAAATGATGGTTGATTGTAAAAATCCTGAA
TGCCAAGTGCGCATGTTCAGAAAAGAGATTGAACAAAAGTTCAAACATCT
CGAGATTCAATGGATGGACAAAAAAACACACGATCAAGAATTCGCAGCGA
TTCATAACAAAATGCTACTCGAAAAGCATATAGAGACTTCAAGGGAGCTA
CATCAAACTCGAGATGAGATGAAAGACATGAAGTCAAAGATAAATTCCTT
AATTGGTTTCAAAGAAAACCAAGCAGAGATAAGTGATGCTTACTCTCTGA
TTAAGGAAACTGAAGCCGAGTTAATAGCCGTGAAAGCCGAGTTACAAAAA
ACGAAGACCGAGTTAACCTCGACAAAGATAGAACACTTGAAAACAAAGAA
TGAGCTTCAAGAAGTTCGAATAGAGGTAGCAGATCTCAACAATCATTGCA
ATCAGCTTTACCAGCTAGTCGAACATTCGTCTGATATCGTGTGTAGCCAT
CTACTCAACGAAAAAGAATCCGAAATTGTATTTGAAAACAAAACTTTTGA
AAATTTGGTGCCCTTACTAGTTAAAAAGAATTATTTAGCACTGGCAAAAT
CACAGAATCTACACTATGATAAAGCTGCTGCAGTCTTTGGCGAACAAGAA
TTCAAATTCAACAAACTGAATGTGATTAATAATTTTTATCCTTACGAATA
CGTGTATAAAACACTTCTCTCCATCATGGATGTAGGAGATATTCACCAAA
GGTCAACAAATGAATTTTTTTTCAAGTTCAATATCTTAGACTATGAATCA
GTTTATGCTGATTTTGGAAATGTTGAATTTCTAGCAAGTCGCCGAAAGTC
AGGTGATGTAGCATATATAAATAAGAACTTTTTATTGGTAGCTGAAAATT
CGAACCGTTGTTCACTTCGCTTTCAAATTGAAGGCTTCGATGAGGAAAAT
TCAAAACTATACATTTTAAATCCGAAATGTTTCCAACGAAGATTATTGAT
TTTTGATTGGAACGATAAAATAACAGAAAAAAATGATTCTGGGGAGGTCT
TATTTTATTTAGTAAGAAATTGAGTACCACTTCATTTGAAAAATGAATGC
CTATATGAACCAGTTAAATGCAAATTCGCTTCACTTGGCTGCACTGGGAT
GAGTCACCTAAACGTGTGTCCAGAAATGATGGTTGATTGTAAAAATCCTG
AATGCCAAGTGCGCATGTTCAGAAAAGAGATTGAACAAAAGTTCAAACAT
CTCGAGATTCAATGGATGGACAAAAAAACACACGATCAAGAATTCGCAGC
GATTCATAACAAAATGCTACTCGAAAAGCATATAGAGACTTCAAGGGAGC
TACATCAAACTCGAGATGAGATGAAAGACATGAAGTCAAAGATAAATTCC
TTAATTGGTTTCAAAGAAAACCAAGCAGAGATAAGTGATGCTTACTCTCT
GATTAAGGAAACTGAAGCCGAGTTAATAGCCGTGAAAGCCGAGTTACAAA
AAACGAAGACCGAGTTAACCTCGACAAAGATAGAACACTTGAAAACAAAG
AATGAGCTTCAAGAAGTTCGAATAGAGGTAGCAGATCTCAACAATCATTG
CAATCAGCTTTACCAGCTAGTCGAACATTCGTCTGATATCGTGTGTAGCC
ATCTACTCAACGAAAAAGAATCCGAAATTGTATTTGAAAACAAAACTTTT
GAAAATTTGGTGCCCTTACTAGTTAAAAAGAATTATTTAGCACTGGCAAA
ATCACAGAATCTACACTATGATAAAGCTGCTGCAGTCTTTGGCGAACAAG
AATTCAAATTCAACAAACTGAATGTGATTAATAATTTTTATCCTTACGAA
TACGTGTATAAAACACTTCTCTCCATCATGGATGTAGGAGATATTCACCA
AAGGTCAACAAATGAATTTTTTTTCAAGTTCAATATCTTAGACTATGAAT
CAGTTTATGCTGATTTTGGAAATGTTGAATTTCTAGCAAGTCGCCGAAAG
TCAGGTGATGTAGCATATATAAATAAGAACTTTTTATTGGTAGCTGAAAA
TTCGAACCGTTGTTCACTTCGCTTTCAAATTGAAGGCTTCGATGAGGAAA
ATTCAAAACTATACATTTTAAATCCGAAATGTTTCCAACGAAGATTATTG
ATTTTTGATTGGAACGATAAAATAACAGAAAAAAATGATTCTGGGGAGGT
CTTATTTTATTTAGTAAGAAATTGAGTACCACTTCATTTGAAAAATGAAT
GCCTATATGAACCAGTTAAATGCAAATTCGCTTCACTTGGCTGCACTGGG
ATGAGTCACCTAAACGTGTGTCCAGAAATGATGGTTGATTGTAAAAATCC
TGAATGCCAAGTGCGCATGTTCAGAAAAGAGATTGAACAAAAGTTCAAAC
ATCTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033519XLOC_033519Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053073-exon-scaffold_225-1575043694:200480..200506TCONS_00053073-exon-scaffold_225-1575043694:200480..200506Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1575043694:197843..197920TCONS_00053073-exon-scaffold_225-1575043694:197843..197920Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1575043694:197229..197306TCONS_00053073-exon-scaffold_225-1575043694:197229..197306Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1575043694:195715..196914TCONS_00053073-exon-scaffold_225-1575043694:195715..196914Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1510915933:200480..200506TCONS_00053073-exon-scaffold_225-1510915933:200480..200506Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1510915933:197843..197920TCONS_00053073-exon-scaffold_225-1510915933:197843..197920Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1510915933:197229..197306TCONS_00053073-exon-scaffold_225-1510915933:197229..197306Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1510915933:195715..196914TCONS_00053073-exon-scaffold_225-1510915933:195715..196914Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1491911889:200480..200506TCONS_00053073-exon-scaffold_225-1491911889:200480..200506Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1491911889:197843..197920TCONS_00053073-exon-scaffold_225-1491911889:197843..197920Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1491911889:197229..197306TCONS_00053073-exon-scaffold_225-1491911889:197229..197306Clytia hemisphaericaexon
TCONS_00053073-exon-scaffold_225-1491911889:195715..196914TCONS_00053073-exon-scaffold_225-1491911889:195715..196914Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053073-proteinTCONS_00053073-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_225supercontigscaffold_225:195715..200506 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.51293e-06	4.94745e-06	0	3.53732e-05	7.67499e-06	0	2.66663e-06	0	1.19113e-05	0	2.61641e-06	1.32829	1.30125	1.3052	1.61724	2.24325e-05	0.383269	1.18618	0.776827	0.31102	5.90012e-05	1.82194e-05	1.00754e-05	0.85505	6.46437e-05	1.28281	3.26523	0.519601	0.770737
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053073 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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