TCONS_00053256 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053256
Unique NameTCONS_00053256
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length184

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053256 ID=TCONS_00053256|Name=TCONS_00053256|organism=Clytia hemisphaerica|type=transcript|length=184bp
TGAGTATGGATGTTCTATCTTTATCGATTTGCAAAAAGCCTTTGATACCG
TCGATCACTCAATTCTACTGTCAAAACTCGATTTTTATGGCATTCGTGGC
AAAGCTCTTGACTGGTTTCGTTCTTTTCTTTCTGGTAGATCACAATTTGT
GTCAGTATCTGGTAAAAACTCAAAATCAAAACCC
Run BLAST on NCBI

transcript from alignment at scaffold_227:152459..152642

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053256 ID=TCONS_00053256|Name=TCONS_00053256|organism=Clytia hemisphaerica|type=transcript|length=184bp|location=Sequence derived from alignment at scaffold_227:152459..152642 (Clytia hemisphaerica)
GGGTTTTGATTTTGAGTTTTTACCAGATACTGACACAAATTGTGATCTAC
CAGAAAGAAAAGAACGAAACCAGTCAAGAGCTTTGCCACGAATGCCATAA
AAATCGAGTTTTGACAGTAGAATTGAGTGATCGACGGTATCAAAGGCTTT
TTGCAAATCGATAAAGATAGAACATCCATACTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033618XLOC_033618Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053256-exon-scaffold_227-1491911889:152459..152642TCONS_00053256-exon-scaffold_227-1491911889:152459..152642Clytia hemisphaericaexon
TCONS_00053256-exon-scaffold_227-1510915933:152459..152642TCONS_00053256-exon-scaffold_227-1510915933:152459..152642Clytia hemisphaericaexon
TCONS_00053256-exon-scaffold_227-1575043694:152459..152642TCONS_00053256-exon-scaffold_227-1575043694:152459..152642Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_227supercontigscaffold_227:152459..152642 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053256 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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