TCONS_00053431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053431
Unique NameTCONS_00053431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4785

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053431 ID=TCONS_00053431|Name=TCONS_00053431|organism=Clytia hemisphaerica|type=transcript|length=4785bp
cgattttcggctaaatagcctatataaaatagtctaaatagcctatgata
ggctaatcagcctatgataggctaatttgaaggtgttcttgactgCTATA
TCGTGCCGATATAAGACCTGACGACCATGCTTTCGAAAAGAGTTATCACG
ATCGGCAGAAAGATCACGtgcacaaacaacaaaattattaGGATGGCGAT
TCCGACAGCTATAACTTGTGATATTTCCTCTACAACAATGGATGCCATAG
ATTTGACAACAGTCGACAAAGCTATTAAAGAAATCTCCTGGTCCCAAGGA
ATAAAGGATCTGGTAGACTCCCTGCATAATGTCGATGaatcaaaGGATTA
TGTTCCATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAGAGG
TGATCAAAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAGGAT
TTGCTCAccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAAGGA
CAGGGAAGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAAAGG
ACAGAGATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGACATACGAG
GtcaaagaaagtttcaattccGAAGTTCTACTCGATGTAGAAAGATCAGC
TTGCTGTCTCTTCGGCTTTCACACGTACGGTGTCCACGTAAACGGGTACG
TAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTNGTCCACGTAAACG
GCTACGTAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTCAAGGCGA
GCGAAGACCAAGCCAACATACCCAGGAAAGCTCGACAATACTGTCGCAGG
TGGAATCGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGAATGCC
TTGAAGAAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGACCAGCT
GGGACCATCAGttacTTTCTTTCAAATGAGCTTGGCCTCCATCCGGAGAC
GGAATTTGTTTACGATTTGGAACTTCCCCGCTCGTTCGAGCCAAAATGTA
ACGATGACGAAGTTTCCGATTTCTATCTTTTACCCATCAAGGAGGTAAAA
GAACTTATATCAACAAAAGAGTTCAAGCCAAACTCCGCGTTAGTGATACT
GGATTTTTTGATCCGGCATGGTTCAATTAAACCAGATGAAGaACCACATT
ACGTTGAGTTCGTCAAAGGTTGTCATCGGACGCTGGCCTATTGATGAATG
CGAATGGAGTATTGCATTGTTGCTGATTCTGTTCTTGTATATCTGCTGAC
CAGTCATCGAACCGTATTTTCCATTGAAAATTCTACCGCCGTTGAATCTA
TGTCCGTTTCTCGGGATTAGATCACAGGAATTTTCCGATTTTGCTATAAA
GATGCAAAATGTGACTGAGCGCTTTGGGAATATTTGAGCCAAAAACAAGA
TTCAATTAGTTGATATTATGTTTTGTAAGCCTATCCGTGCTCTTTTATTT
TACGTGTCCCAGTGCTTTTACAACTTAACGAGTGTCACATTTGTTACGGG
TAGTCACTAAAGGGTTTTAGGGTTTCCTGTTTTAATCATTTCAACTTTAT
GCTCACTGTTCAATGTTTTGTATATCCATACAAATTATCACTAGTTGGTA
TAACGTTTCTTTACAGAGAGTGATACCAATGACCTGGCATGTGTTCACCt
acataaaactgaaaatatttcacGATATTGTACTTGTTTTGTTTCTCTAG
ATTTGTTTTCCTTACTTTGAATAAGGATTATCTTAAATCTCTATTGActa
tttaaaataattttgtatttaCAAAACCCactatttattaaaaaaatttg
tacagaaatttttataggaaaattgttttttaaaaaagataactTTATCT
TATCACGAGGCATTTTTTCCAATCCATATTTTCGAGAAAAAGTGAACAAA
CTTTTCAGTGATTAAACTATTAACTAGCATCTATCATGATCGCAGCTAAA
CAAAAACCTCCATCTTTCGAccataaattcaaaaaatgagtTCCCGCAGT
CACATCACTAGCAACAGTATCAACCTGTGTCCGACGTCCAGGGTCACCGG
GCTTTCCTTCTTGGATGAAAACCGGTTGATCGTTTTTATCATCTATCCAG
ATCATTGAAGAGCCGCCCCATTTTGAATGCGTTGTTATGGCAACTTCAAA
TCGTTTATCTTTATTTTCAGGTGATTTTGGAATGGTAAAGACGAGCTTCA
GAGAGGATGTCGGTTTATCCGTTTTCTCAGATTTATAACAAATAACTTTA
TCAAATCTAATTGGAAAGTTAGTAGCATATTGTATTTTAAAGCCATCATT
TGAAGCCACGCTCACCTCCAAAGTGTTATGGACTGGATCTTTTTCATCGG
GTCGTATCAAGGTCCAACAATATGGTTCTGGATGTTTTGGGCCAATGAAT
AAGGGGTCTGGTAACAAATACTGGTCCTGAAAATTGACAATATCACCATC
GTGTTTTATGGCGTATTGTAAAACAGCTCGCATCACGTGTCGCAGATGAA
GTAATATCAATAATGCTGATTGCGCATGCCCCTTAAGAGATGGATGGTAT
TGGTCAACACTGAATAAATCAGCCAATAGAAATCCTGGTCTGGATTTAAC
TAAGCCGTTACAAACCATGGCTCTCCAACTCAATGTAGGTACTTTATAAT
AACTCGCTATAGTATGTTCTTGTTGGTCTTCAAAGTTCGGACAATCTGAT
AAACCAGAATTTTTATAATCGATCCCTTTAAAGAAATTCAGATAAAGTAA
TGCTGGTTTCGTTGGTAAATCAAGAATCATTCTAGTGAACCTTTCTAACG
GCCTTGCACCTTTCGTGGGAAACGTTTTATATCTATTATAATCATTAGCT
GAAAGCTCCCATATGACTAAATCAACATTCTTCTTCAGGTGGTTTTTGAc
acaatatgaaaaataatctGTCCCTATAGAACCAATGGCTGCATTGTTTA
CTTTCATTTTGGAACCAGTGACAGGGAAAATCCATTGGTTCCACCAATCA
ACTACGCCCTTATAATAAAGTCCTTCTATGCTTCCACGATCTTTATATAA
CCCACCACCAGCACTTATGGAGCCACCAACTACACTCAATGTTATATCAT
GACCTGTAATAGCTTTTCGCATCACACCCTTTAATCTCTCTATGTATCCC
GGATAAACAAGTCCTGAACGAATCAGTATGGCATTCAAGTCTAGAGAAGA
TAGTGTTTTGTATGGATATCGCCAAGATTCTAAAGGGTCCTTGTTTAGGT
ATTGAACGATAGCCTTGGCTTTTTCAATATTAATGACTTTAGTTTTGTTT
GAGGGTTTAGAATTTGATGAAGCAAGTAAGTTCATCAAGTTCCCTGAGTT
TGAAATGTTTGGCTGTGATTCTAGAGCGCTTGATATAGTAACTGCAAAAG
ATTGGTTTTGCTGTTTGGCTGTTGGATCAAAGCTTGGCTTCTGCTGTTGT
TTTACACCATTTAGAATATTTGTATTTGATGATTGTTGTTTTGGTTTTGT
AGAAGCGGTTTCATTGTTTGTGGATATCGCGTTTTCTTCCATGATACTGG
GGATGGATGAATTTGCGTTATCCACCGAATCTGGATCTGACCATGTGTTG
TTTGTGAGTCGAAAATTGTTGGGTAGTTTTGGTCTGGAAATTACCAAGTC
ATCGCTATTATCGTTTTCTGTTTCACCTTTTTGTTGGCCGTCAGTGGATG
ATGATTTTTTGTCTCCAGTGCGGTGGAACTCTGTCTTTTTCTTGTAATGT
TCTTCTATGGTGTAATGTTTTGGATGAGGGTTGGTGGGTGGCATATGGTG
AAGAGAAGATATAACTATTGTTTTGTTTGTGTTGTTAGATGTCAATGATT
TATTGTTCGTTGCAGTTGTAAATATCACGTGTCCAGgttgtttgttttga
ataacctTATTCGTTGtcaatgttttgtttttcgttttgtttttctgttt
ttgaatgtttttagcGACCGGTTTAGCGATTTTTTTCTGCTGCTTGATTG
CTTGTTTCTTTTCGAatggtttttttggactttgtttcTCAGTTCTAATC
TCAGCAGAATTTGCAGAAGTTCCTTTGGTTGTCTCACTCTTCTCTTGACT
TGATGAAGAAACCGCTCTAATCAAATTCTTATCTTCAGTATTCAAATTCT
TCATCTTATCTCGAACTTGTTGTAACTTTGCGATATCTAAATCCAGTTCA
GTTTGAGGTGTCGAGTCTGTTTCTTCTTGATGTGGGTCATCAACACTTCT
GGTCATCTGATCTTTAGGTGTGATCACGATTACCCGCACGTGTTTATCTT
TGATCGGTTGTTTGATCTCATCCACGAATTTCTCTTGAATCTGTTCATAA
CTTCTCTCCATATCTTGATAAACCTCATCCTTTTGGACGGCATTTTCTTC
CAACGATTCTCGATCAATAATAATCGTAAACCCTTCATCGAAATCTTCGC
TGCTTCGTTTTTGAATAATTGAAGACCGTTTTTCCACAATCGGATTTATC
GGATTCTCTTGTTCGGTATCAATGACGATCAATGCGCTGTCACTTTTCTC
GTCGTAATTTTCGAGGGTTTGCTCCAACTCATTATAACTCTCTTGTTCTT
GGAGCAATGTTGGTGAGCTTGAAAGGCTTTCTTGTTGGCACGTGATTCGA
CATGTTGAAAGGAGGAGAAACAAAGATAAGGAATGGACAAAGAGTAACAT
GCTGCTCGCCTAAAAAATAAAGCAGGAAACAATGG
Run BLAST on NCBI

transcript from alignment at scaffold_231:218086..230151+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053431 ID=TCONS_00053431|Name=TCONS_00053431|organism=Clytia hemisphaerica|type=transcript|length=12066bp|location=Sequence derived from alignment at scaffold_231:218086..230151+ (Clytia hemisphaerica)
cgattttcggctaaatagcctatataaaatagtctaaatagcctatgata
ggctaatcagcctatgataggctaatttgaaggtgttcttgactgCTATA
TCGTGCCGATATAAGACCTGACGACCATGCTTTCGAAAAGAGTTATCACG
ATCGGCAGAAAGATCACGtgcacaaacaacaaaattattaGGATGGCGAT
TCCGACAGCTATAACTTGTGATATTTCCTCTACAACAATGGATGCCATAG
ATTTGACAACAGTCGACAAAGCTATTAAAGAAATCTCCTGGTCCCAAGGA
ATAAAGGATCTGGTAGACTCCCTGCATAATGTCGATGGTATAGTAAAGTT
GTTTTGGTTTTCCTGTTACTATGTTCCCATCCTCATTCTTCTTTCTATTT
CCACTTCCATTTATCTTCCTATTCCCATTATTGTGTTCTTTTCCTCCACT
TATGCTTTCCAATTTTGCTCTCCTCCCCATTACGCTTCCATTCTGCCTCA
CAAAAATGCAGGAGAGCTCCAATTCgggaaaattttccccgataatccaa
tttttccaaatcggAAAATCAGCAGATCGGGGGAATTTTCCTANTTTTTT
ccctcaaaatcaaaatttttttctaaaaatcgtgatttttcccaccctta
gagagactactttgaaatttcctgatttttgtaacccttagagagacttt
gataGGTGacaaacccgacccttaccgtccgcacatacccagcacctatt
tttgtcTAAGTAACCCCACCCACGGGTGAAAAatagacgcgactatttat
atttcgtcagaaatcgaggtttatatcgattttcggctaaatagcctata
taaaatagtctaaatagcctatgataggctaatcagcctatgataggcta
atttgaaggtgttcttgactgCTATATCGTGCCGATATAAGACCTGACGA
CCATGCTTTCGAAAAGAGTTATCACGATCGGCAGAAAGATCACGtgcaca
aacaacaaaattattaGGATGGCGATTCCGACAGCTATAACTTGTGATAT
TTCCTCTACAACAATGGATGCCATAGATTTGACAACAGTCGACAAAGCTA
TTAAAGAAATCTCCTGGTCCCAAGGAATAAAGGATCTGGTAGACTCCCTG
CATAATGTCGATGGTATAGTAAAGTTGTTTTGGTTTTCCTGTTACTATGT
TCCCATCCTCATTCTTCTTTCTATTTCCACTTCCATTTATCTTCCTATTC
CCATTATTGTGTTCTTTTCCTCCACTTATGCTTTCCAATTTTGCTCTCCT
CCCCATTACGCTTCCATTCTGCCTCACAAAAATGCAGGAGAGCTCCAATA
TTCgggaaaattttccccgataatccaatttttccaaatcggAAAATCAG
CAGATCGGGGGAATTTTCCTGCAAAATCTGATTTTATCAGgatttttttc
gggaaattggggaaatcagagaaaatttacgtcccgattttccaaaatca
ggaaatcttGTCATTCcgttttatcttttttcaggaaatcggaaattttt
tggaaatgcgggagatgtgggagaaaatcctgaaaatgcggGAGATGATC
CTgaaaatgcgggagatttgATTGCGGGAGTCTCTCGCCCAATGAGAGAG
AGTTGACACCTATGAGACGTGTCCCTCATCCCTGTTCCTGTTCAAACACG
TGTTCCTGTTCCCATAGATGTTCCTGTTCCCATATGTTATATACATGTTC
CTATTCCAATACATCTTCAAGTTCCCATTTGTATTTCCGTTCCCATTTGT
GTTCCTGTTTGCATTTGTGTTCCTGTCCCCGTACGTATTCCACATATTTG
GGAAAGGAAGCACAAATGGGAACAGGAACACAAATAGGGAGGAGAGTGAG
ATGGGAAGCATAATTGGAGGATAAGAACATAAATCGCAACCTTCATTTCA
AAAAGCCCAAGTCCACTTACCCctcaatttcaaaaagatctAAGTCCATT
TATatgaaaataagtttttttgtattttctgtaTCTATGAGTCATTAGCT
TTCTTTTGATACGTATAATATAAAGATTTCATGCTTAAAAAGgccttcaa
attttttgatgaacaaTTGTGGACTAAAGGtctgtagacttttcaaaaat
tcaacaaTACAGAGTGCCAAGAAAAGCCCTTTGACACTTGGGAAATTCCC
CAAatgaaccacaagtgattatttggCAGAAGACACCTAAAAGCTTGCTA
GCAGTCCTTGTGAATTTTGGACTtgcaaatgactgaaaatgggtGAACTT
CAGCCACACAGGTGGTGGGTGCACCAGAGAGCTCTGAAAAGTTGTTTATA
ATACACCTTTCTCTTTCTTCTCTGTTTcatataaaaagtcaccaaaattt
cgagtaaacaaaccattCCATTGGCTTAAAgcaaaaacacaaacaaaaaa
atgtgcAGAGTGAGAAAAGTGTGCTTTCTGTGCTCTTACCCTTATTCTTG
CTTTTTATATGAAGCAGCTAACCTTAAAAAGGTGCATTGATTAAACAATC
TCAAATATGTTCTATAATAGATGTCTtctcgaaaaagttgaagagcAAAA
CTCACTGAACCTTCAATCTTCAATCTCAGACAAAAAATAGCCTGATGact
ttgcaaaaattaatttccTTCAATGTCGAGTGGATTTGGATTCTGGCATT
GTCATCCAAACTCTCCAAATCCAATAAAACAACACCGGCCCTGGTAAAGA
TGGGTTTTCAGATCATGGACCTAAGtccatcaaaaaagaaaacttatttT
AAAAAGGCCTAGTTCATTTAGGTCTCAGCCCATATTAAGATAAAGAGTAG
ATGGCCTAAGTCTTTCAAAGAATCTAGTTCACATTAAAAGGACCTAAATG
GATCAAAACAGTATTGTATGGCAggttttcagttttcaatgtattttggt
caatttctatGGCCTTGGTTATATACTGTATATTCTCAAAGTTTGTGTTT
TTTTAAGATCTATTCAATTATTAGCAAttttgtttgaagaaaaaaggttT
TATGTGAAACAAAACATTCATGATTCTCTATgatgttttcataacttatt
tagaaattttgtttgaagcTTAAAAAGTTGTTGGATTTTGTGTGATGTTT
CCTTtgcttttaacaaaaaaaaaacaaacatgttCTCTGTTTCAAATGAT
TGATTTCGGTTCAGATCTTTGGAATTTTGTGTTTGAAATGTATATGTTTC
CCTTTTTAAGGGGGTCTGTGCCttatttttccaaggggttCTCGAACATT
ACCATAGGGGTTTATTTAATTAAGGTTTCAAGGCCAGGGGCTATTCCAAA
CTAGAATACTTTAAATCAGGAATCCAACAGTGccagacaatttcaaaaag
tataaaaagaagcataacccaaaaataaccatttccttggatttttaaat
aaaaaacaacaagaaaatagagTCGATGTTGTAGGAATATTTCGACGATC
TTTATCatctatttttgtttttgtctatCAGACATCGCTGAATACTGTCT
GTATTAGGTTATGCCATATCTTCCTTTCTTTGGAatgtaaaactcctact
cttctgGATATGCGCACTGCTCCTGTTTTGAGAAATATTCTCTGTTTACA
TCCCATCTGACGAGGTTTAACAAAACCTAAGCCAATCGgttgtgttttaa
acattctttatTTCAAATCTCTATTGAATCTCTTTTGTTAATCCTGTTAA
TAGGCGAATTCTCGTCTTGAGTCACTTTGGTCGCCTaaagcagtgcctat
agaccaataTTAAATTTTGGAGTATATCATGGCCTactaaaaatttttat
ttatttatttttagtagGCCATGAGTTTATCTGCATACACTTTGTTCGAC
TTGCAGAATCATGCAAAAATAATgattaaacaaaagaaacagtCCAGAAG
TTCACCAGCTGACCTGTTCTNAGAAATATTCTCCGTTTACGTCGCATGCG
CACTGATGAGGTTTAACAAAACCTAAGCCAATCGgttgtgttttaaacat
tctttatTTCAAATCTCTTTTGTTAATCTTGTTAATCCTGTTAATAGGCG
AATTCCCGTCGTGAGTCACTTTGGTCGCCTaaagcagtgcctatagacca
ataTTAAATTTTGGATATAATATATGCATACACTTTGTTCGACTTGCAGA
ATCATGCAAAAATAATgattaaacaaaagaaacagtCCAGAAGTTCACCA
GTTGAACTGTTCCACTTTCTGCatactttctttttttgtcaaatatcaAT
GTCTTCAGGTTCTTTTGCTGTTGTTTCTTGTGAGAGGGTGAAAGACtgaa
aacaaaatgaaagacaTGGAAGTTGAAGAAACTGTCAATGAAGAAGAACT
TAATAATGAAACTTCGTGGTCAGAGAAAATGCTAAAACTGACCAAATCTA
TTCATTCTTTCAACAGCCAAGGTATATAATTGTAATTCCTCACGAAAAAT
CTTTTCCTTCTTGTTAAAAAGATGCTTTTCTATTTCAAACGTCAGGTTTT
CATTTAGATCTTTACCTTATCTTTTGCAATATGACAGCTATCAGTCAGTT
TTATTGTGAAAATTGATCAAAACTAGTCAAAGCTCTTCTCATCGCAGTAA
GCAGGCGAACTTCAATATGGtactttgtttttcaaaaaaaaatgtacaaG
TTTAAATTAACATTGtgagaaaaatagaaatattatatatctaaactttt
caccatcagaaagaagaaaggccaacttaaattttgagctgtcATATCTT
AAATTTGCTTCACGTGTTAGTTTAAGGTTTTAATTGCTGTAATTaggata
tttcgattttaacGATTCTTTTTTGCGGTTTTTTGTAAGCTtgattttca
ttctttttcgaAAGGGAATATTTTCGAACTTTCTTTATAACTTTTAAACA
CTTGAAGCAAATTAAATAAAGTATGATAGCTCCAAATTCAATTTAGTCTT
TCCTCCTTCGAATGGCGAAATATTTGgatttataacatttttagttttct
cagGTTTTCTCACAAACTAACTAGaaacttgtacacttttttctGAAACA
CCCGTTGTTTTGAGATTATAGGCTTTTGCTATAAAAGGTACTTTTCCGTC
TGAGACCACTGTACAGTTATTTCTGTCATCTTGGATACTAATAACAAATT
GGTCTTTCTAATTTCAGCAAACTATGATGATGGTATCTCTCTAAATTGTA
CTCCTTATTGAAACCCCTCCCTTTCCTGACCTTTTCCTGACCCAAAATAA
CTGTTTCAATTTTGATGATTAATTCCTAGCAGCCCCTTTTATCCCTTATT
TATGGAATGCCTTATTTATGGAATGCCTTATTTATGgaatgagaaagaaa
gaaatccAAGGTGTATGTAActtttcattttgtatttgctgaaaattgtt
tcattttaacACTACCAAGGAAAAGTCGAATTTTTATACTCTCCAGATCT
TTTAGACTTTTTAAAGGCATTGTCCATACTGCTCCAAATTGTACGTaagt
tattattatttttttagaatcaaaGGATTATGTTCCATTTCTCTTGAACG
ATGCGCAAATCGGTTTGGTATCTCCAGAGGTGATCAAAGAAATGTCTAAA
CAAAAGGCTATTTTCATCATTGCGAAGGATTTGCTCAccggaaaaacaaa
atttaccacAATGGCGCTGTCACTCAAGGACAGGGAAGAACGTTCTACGA
AGTTAGCCTGTTTCTTACGGGACCTAAAGGACAGAGATGTGTTCCCAACC
TTACGGGGTTGGAGAAATGAGGTAATCATATTTTCCACTCTAATCATGAA
TTGCACAACCTTTAGCCAAACTAATTTTGTATCTTCTATCTTTACTTTAT
TAAATAAAGACCTTATACAGGACGCCTTTTTGACACGAAAAACAAACCCA
TATTCTAAGTTGATAAGTATTTGATAGGGAAAAAGATTAGGTTCGAATAG
CTAGAGGATCCCTTACCTTATCGGttaattatttcaaattgaagCAAGAT
TGATTAGGATTTTCTTCTCTCATAAGATTGCCCGCGAAATAGCCGAAAGC
CCACCATATAGCAGAGATAAGTGACGTCTTTCCGATACAAATCATTTGAG
TAGGATCCGTTCTAATAAATGGGTTCGTACGTAAAATTAGCCACAAATGG
TATTATAAGAGGATGATGGTCTGTTCACTGTAGTGAGGGATATGAATCTA
TAAAACAATAAACTCATCTCTCAATCTTAGACATACGAGGtcaaagaaag
tttcaattccGAAGTTCTACTCGATGTAGAAAGATCAGCTTGCTGTGAGT
GAATGACTTGTTTTATTATTAACCATTGAAAGAATGTAAAATCATCTTTA
ACCAAGGAACACAACTTATCTTTGCCGATGGTCCGTTCCTTTTTACACAG
TACAAGAACTCTTTtcggaaatcgaaaatttgatCTGCACATACTCGTAG
TCGGCAGCAAATCTGATAAGCGTACAAAATGTGGTTTTGATTTTGTTCAG
CctcgaaaaaactaaatttcttAGATGTCGATAGAAATTTGTGAATTTGA
TAGAATGGTGATAACACCGAAATATatcgtttgattgtttttaacatttt
aagaatctttgaaaaatggcctcaaattaaaacataatttaatttgattt
tatttcGGTCAAACCTGTGTATAACCGCCACATTCTTTTTTCGTGCTAGG
TCTCTTCGGCTTTCACACGTACGGTGTCCACGTAAACGGGTACGTAAAGA
ACGATCAGGGCGACGTTTACATGTGGGTCTNGTCCACGTAAACGGCTACG
TAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTCAAGGCGAGCGAAG
ACCAAGCCAACATACCCAGGAAAGCTCGACAATACTGTAAGCTTTAACAT
TCGAGTCTTTGGAAGTGTTTCAATAGTGCTAAAATGTAAGAAGGTGACAT
AACCATTGTTGGTTACAAAAGAATGTATCTTTAGGAAGATTTTGATGTTC
TAACTTCTTTCACTTTCAACTCAGGTCGCAGGTGGAATCGCTTCAGGGGA
ATCAGTGAAGCAAACATTGGAACGAGAATGCCTTGAAGAAGCGGGCATTA
CTGGCAAATTTTCGTCTCAAGCAAGACCAGCTGGGACCATCAGGTATTTC
CTTAAATCAATCATAATTATGggttttcaatattttacctCAAAACCTTT
TGTAGACACAAAgatgtatttttgtttttcatcggttactctttttttat
ttttagttacTTTCTTTCAAATGAGCTTGGCCTCCATCCGGAGACGGAAT
TTGTTTACGATTTGGAACTTCCCCGCTCGTTCGAGCCAAAATGTAACGAT
GACGAAGTTTCCGATTTCTATCTTTTACCCATCAAGGAGGTAAAATCATG
TTTTGTTGCTGTTCTGGTACAGGGTGGGCAAAAATATAAATATGGTCAGA
CAAAAATTGTGTTACATATGGAAAGCAATTAGTGCCATTTTTTGCCCACC
CTTTAATAACATTACTTCTCAGCTCTTTCCTCTTACTTGTTGAAGAAGAA
CCGAGTGTTACTGTCTTTGAAAATATGGATACCGTAttacttcttttaaa
cgcccccctcgaataaacgcccctcctaacaaggaaaattatttaataaa
cgcccccctcaAATGAACGCCCCCTCTAGGGGAAGGGTGCTTATTGgaaa
cttgtgactttaatacttcaataccagtgttgattgggttggaaaaggaa
gattttaatcatttcttgtaaccagagcagttttcgatgcaattttagtc
gttgaaccaaagaaattttgcactaaaatcctgatagagaactaaaacaa
agggtatatttgctctaaatattcgattttagactaaaataatttaataa
acgcccccttcttttaaacgccccgggcgtttattcggAGTAATACGGTA
TATGtagaatatttttctaaatagCTTAGAACATAACTATTTCCTTTCAA
GGTAAAAGAACTTATATCAACAAAAGAGTTCAAGCCAAACTCCGCGTTAG
TGATACTGGATTTTTTGATCCGGCATGGTTCAATTAAACCAGATGAAGGT
ATTCTATTTGTTGTTTGTTACTTTACCCTCTTGAGTGAATTGTAGTGAAT
AAAACGATAACATTCGAAGAAAAGGTTCTGGAAATGTAATGGAATTCTAG
CTTGATTTGAGTAGAAGATTCATTCAggaagatttgaaaatttcaaacta
ccAAATAGCCGGATGGTTGaaagttttacttttgaaaacccaataCTAAA
GGTCAAAATCAAGCTAATTTGTAAGCTAATAACTGAAAGCATTCTTGTAA
ACATGGGTCCTGCGATTGAGGGCTGAAGACAaggaaaaacaaggaaacat
ttttctttcattttccttttagaACCACATTACGTTGAGTTCGTCAAAGG
TTGTCATCGGACGCTGGCCTATTGATGAATGCGAATGGAGTATTGCATTG
TTGCTGATTCTGTTCTTGTATATCTGCTGACCAGTCATCGAACCGTATTT
TCCATTGAAAATTCTACCGCCGTTGAATCTATGTCCGTTTCTCGGGATTA
GATCACAGGAATTTTCCGATTTTGCTATAAAGATGCAAAATGTGACTGAG
CGCTTTGGGAATATTTGAGCCAAAAACAAGATTCAATTAGTTGATATTAT
GTTTTGTAAGCCTATCCGTGCTCTTTTATTTTACGTGTCCCAGTGCTTTT
ACAACTTAACGAGTGTCACATTTGTTACGGGTAGTCACTAAAGGGTTTTA
GGGTTTCCTGTTTTAATCATTTCAACTTTATGCTCACTGTTCAATGTTTT
GTATATCCATACAAATTATCACTAGTTGGTATAACGTTTCTTTACAGAGA
GTGATACCAATGACCTGGCATGTGTTCACCtacataaaactgaaaatatt
tcacGATATTGTACTTGTTTTGTTTCTCTAGATTTGTTTTCCTTACTTTG
AATAAGGATTATCTTAAATCTCTATTGActatttaaaataattttgtatt
taCAAAACCCactatttattaaaaaaatttgtacagaaatttttatagga
aaattgttttttaaaaaagataactTTATCTTATCACGAGGCATTTTTTC
CAATCCATATTTTCGAGAAAAAGTGAACAAACTTTTCAGTGATTAAACTA
TTAACTAGCATCTATCATGATCGCAGCTAAACAAAAACCTCCATCTTTCG
AccataaattcaaaaaatgagtTCCCGCAGTCACATCACTAGCAACAGTA
TCAACCTGTGTCCGACGTCCAGGGTCACCGGGCTTTCCTTCTTGGATGAA
AACCGGTTGATCGTTTTTATCATCTATCCAGATCATTGAAGAGCCGCCCC
ATTTTGAATGCGTTGTTATGGCAACTTCAAATCGTTTATCTTTATTTTCA
GGTGATTTTGGAATGGTAAAGACGAGCTTCAGAGAGGATGTCGGTTTATC
CGTTTTCTCAGATTTATAACAAATAACTTTATCAAATCTAATTGGAAAGT
TAGTAGCATATTGTATTTTAAAGCCATCATTTGAAGCCACGCTCACCTCC
AAAGTGTTATGGACTGGATCTTTTTCATCGGGTCGTATCAAGGTCCAACA
ATATGGTTCTGGATGTTTTGGGCCAATGAATAAGGGGTCTGGTAACAAAT
ACTGGTCCTGAAAATTGACAATATCACCATCGTGTTTTATGGCGTATTGT
AAAACAGCTCGCATCACGTGTCGCAGATGAAGTAATATCAATAATGCTGA
TTGCGCATGCCCCTTAAGAGATGGATGGTATTGGTCAACACTGAATAAAT
CAGCCAATAGAAATCCTGGTCTGGATTTAACTAAGCCGTTACAAACCATG
GCTCTCCAACTCAATGTAGGTACTTTATAATAACTCGCTATAGTATGTTC
TTGTTGGTCTTCAAAGTTCGGACAATCTGATAAACCAGAATTTTTATAAT
CGATCCCTTTAAAGAAATTCAGATAAAGTAATGCTGGTTTCGTTGGTAAA
TCAAGAATCATTCTAGTGAACCTTTCTAACGGCCTTGCACCTTTCGTGGG
AAACGTTTTATATCTATTATAATCATTAGCTGAAAGCTCCCATATGACTA
AATCAACATTCTTCTTCAGGTGGTTTTTGAcacaatatgaaaaataatct
GTCCCTATAGAACCAATGGCTGCATTGTTTACTTTCATTTTGGAACCAGT
GACAGGGAAAATCCATTGGTTCCACCAATCAACTACGCCCTTATAATAAA
GTCCTTCTATGCTTCCACGATCTTTATATAACCCACCACCAGCACTTATG
GAGCCACCAACTACACTCAATGTTATATCATGACCTGTAATAGCTTTTCG
CATCACACCCTTTAATCTCTCTATGTATCCCGGATAAACAAGTCCTGAAC
GAATCAGTATGGCATTCAAGTCTAGAGAAGATAGTGTTTTGTATGGATAT
CGCCAAGATTCTAAAGGGTCCTTGTTTAGGTATTGAACGATAGCCTTGGC
TTTTTCAATATTAATGACTTTAGTTTTGTTTGAGGGTTTAGAATTTGATG
AAGCAAGTAAGTTCATCAAGTTCCCTGAGTTTGAAATGTTTGGCTGTGAT
TCTAGAGCGCTTGATATAGTAACTGCAAAAGATTGGTTTTGCTGTTTGGC
TGTTGGATCAAAGCTTGGCTTCTGCTGTTGTTTTACACCATTTAGAATAT
TTGTATTTGATGATTGTTGTTTTGGTTTTGTAGAAGCGGTTTCATTGTTT
GTGGATATCGCGTTTTCTTCCATGATACTGGGGATGGATGAATTTGCGTT
ATCCACCGAATCTGGATCTGACCATGTGTTGTTTGTGAGTCGAAAATTGT
TGGGTAGTTTTGGTCTGGAAATTACCAAGTCATCGCTATTATCGTTTTCT
GTTTCACCTTTTTGTTGGCCGTCAGTGGATGATGATTTTTTGTCTCCAGT
GCGGTGGAACTCTGTCTTTTTCTTGTAATGTTCTTCTATGGTGTAATGTT
TTGGATGAGGGTTGGTGGGTGGCATATGGTGAAGAGAAGATATAACTATT
GTTTTGTTTGTGTTGTTAGATGTCAATGATTTATTGTTCGTTGCAGTTGT
AAATATCACGTGTCCAGgttgtttgttttgaataacctTATTCGTTGtca
atgttttgtttttcgttttgtttttctgtttttgaatgtttttagcGACC
GGTTTAGCGATTTTTTTCTGCTGCTTGATTGCTTGTTTCTTTTCGAatgg
tttttttggactttgtttcTCAGTTCTAATCTCAGCAGAATTTGCAGAAG
TTCCTTTGGTTGTCTCACTCTTCTCTTGACTTGATGAAGAAACCGCTCTA
ATCAAATTCTTATCTTCAGTATTCAAATTCTTCATCTTATCTCGAACTTG
TTGTAACTTTGCGATATCTAAATCCAGTTCAGTTTGAGGTGTCGAGTCTG
TTTCTTCTTGATGTGGGTCATCAACACTTCTGGTCATCTGATCTTTAGGT
GTGATCACGATTACCCGCACGTGTTTATCTTTGATCGGTTGTTTGATCTC
ATCCACGAATTTCTCTTGAATCTGTTCATAACTTCTCTCCATATCTTGAT
AAACCTCATCCTTTTGGACGGCATTTTCTTCCAACGATTCTCGATCAATA
ATAATCGTAAACCCTTCATCGAAATCTTCGCTGCTTCGTTTTTGAATAAT
TGAAGACCGTTTTTCCACAATCGGATTTATCGGATTCTCTTGTTCGGTAT
CAATGACGATCAATGCGCTGTCACTTTTCTCGTCGTAATTTTCGAGGGTT
TGCTCCAACTCATTATAACTCTCTTGTTCTTGGAGCAATGTTGGTGAGCT
TGAAAGGCTTTCTTGTTGGCACGTGATTCGACATGTTGAAAGGAGGAGAA
ACAAAGATAAGGAATGGACAAAGAGTAACATGCTGCTCGCCTAAAAAATA
AAGCAGGAAACAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033734XLOC_033734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053431-exon-scaffold_231-1491911889:218086..218422TCONS_00053431-exon-scaffold_231-1491911889:218086..218422Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:218086..218422TCONS_00053431-exon-scaffold_231-1510915933:218086..218422Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:218086..218422TCONS_00053431-exon-scaffold_231-1575043694:218086..218422Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:223653..223906TCONS_00053431-exon-scaffold_231-1491911889:223653..223906Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:223653..223906TCONS_00053431-exon-scaffold_231-1510915933:223653..223906Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:223653..223906TCONS_00053431-exon-scaffold_231-1575043694:223653..223906Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:224366..224429TCONS_00053431-exon-scaffold_231-1491911889:224366..224429Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:224366..224429TCONS_00053431-exon-scaffold_231-1510915933:224366..224429Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:224366..224429TCONS_00053431-exon-scaffold_231-1575043694:224366..224429Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:224835..225021TCONS_00053431-exon-scaffold_231-1491911889:224835..225021Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:224835..225021TCONS_00053431-exon-scaffold_231-1510915933:224835..225021Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:224835..225021TCONS_00053431-exon-scaffold_231-1575043694:224835..225021Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:225160..225278TCONS_00053431-exon-scaffold_231-1491911889:225160..225278Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:225160..225278TCONS_00053431-exon-scaffold_231-1510915933:225160..225278Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:225160..225278TCONS_00053431-exon-scaffold_231-1575043694:225160..225278Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:225392..225524TCONS_00053431-exon-scaffold_231-1491911889:225392..225524Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:225392..225524TCONS_00053431-exon-scaffold_231-1510915933:225392..225524Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:225392..225524TCONS_00053431-exon-scaffold_231-1575043694:225392..225524Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:226137..226233TCONS_00053431-exon-scaffold_231-1491911889:226137..226233Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:226137..226233TCONS_00053431-exon-scaffold_231-1510915933:226137..226233Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:226137..226233TCONS_00053431-exon-scaffold_231-1575043694:226137..226233Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1491911889:226558..230151TCONS_00053431-exon-scaffold_231-1491911889:226558..230151Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1510915933:226558..230151TCONS_00053431-exon-scaffold_231-1510915933:226558..230151Clytia hemisphaericaexon
TCONS_00053431-exon-scaffold_231-1575043694:226558..230151TCONS_00053431-exon-scaffold_231-1575043694:226558..230151Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:218086..230151 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.48019	2.93403	15.396	22.5482	1.46351	1.02001	0.450067	1.28492	0.776937	0.737904	0.555482	0.24787	0.18414	0	0.501298	0.526946	1.10383	0.509116	0.333829	0.253732	0.248676	1.14476	0.788951	1.67237	1.51695	1.86985	0.344331	0.299293	0.300569	0.285562
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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