TCONS_00053433 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053433
Unique NameTCONS_00053433
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4684

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053433 ID=TCONS_00053433|Name=TCONS_00053433|organism=Clytia hemisphaerica|type=transcript|length=4684bp
CGTGCCGATATAAGACCTGACGACCATGCTTTCGAAAAGAGTTATCACGA
TCGGCAGAAAGATCACGtgcacaaacaacaaaattattaGGATGGCGATT
CCGACAGCTATAACTTGTGATATTTCCTCTACAACAATGGATGCCATAGA
TTTGACAACAGTCGACAAAGCTATTAAAGAAATCTCCTGGTCCCAAGGAA
TAAAGGATCTGGTAGACTCCCTGCATAATGTCGATGaatcaaaGGATTAT
GTTCCATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAGAGGT
GATCAAAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAGGATT
TGCTCAccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAAGGAC
AGGGAAGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAAAGGA
CAGAGATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGACATACGAGG
tcaaagaaagtttcaattccGAAGTTCTACTCGATGTAGAAAGATCAGCT
TGCTGTCTCTTCGGCTTTCACACGTACGGTGTCCACGTAAACGGGTACGT
AAAGAACGATCAGGGCGACGTTTACATGTGGGTCTNGTCCACGTAAACGG
CTACGTAAAGAACGATCAGGGCGACGTTTACATGTGGGTCTCAAGGCGAG
CGAAGACCAAGCCAACATACCCAGGAAAGCTCGACAATACTGTCGCAGGT
GGAATCGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGAATGCCT
TGAAGAAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGACCAGCTG
GGACCATCAGttacTTTCTTTCAAATGAGCTTGGCCTCCATCCGGAGACG
GAATTTGTTTACGATTTGGAACTTCCCCGCTCGTTCGAGCCAAAATGTAA
CGATGACGAAGTTTCCGATTTCTATCTTTTACCCATCAAGGAGGTAAAAG
AACTTATATCAACAAAAGAGTTCAAGCCAAACTCCGCGTTAGTGATACTG
GATTTTTTGATCCGGCATGGTTCAATTAAACCAGATGAAGaACCACATTA
CGTTGAGTTCGTCAAAGGTTGTCATCGGACGCTGGCCTATTGATGAATGC
GAATGGAGTATTGCATTGTTGCTGATTCTGTTCTTGTATATCTGCTGACC
AGTCATCGAACCGTATTTTCCATTGAAAATTCTACCGCCGTTGAATCTAT
GTCCGTTTCTCGGGATTAGATCACAGGAATTTTCCGATTTTGCTATAAAG
ATGCAAAATGTGACTGAGCGCTTTGGGAATATTTGAGCCAAAAACAAGAT
TCAATTAGTTGATATTATGTTTTGTAAGCCTATCCGTGCTCTTTTATTTT
ACGTGTCCCAGTGCTTTTACAACTTAACGAGTGTCACATTTGTTACGGGT
AGTCACTAAAGGGTTTTAGGGTTTCCTGTTTTAATCATTTCAACTTTATG
CTCACTGTTCAATGTTTTGTATATCCATACAAATTATCACTAGTTGGTAT
AACGTTTCTTTACAGAGAGTGATACCAATGACCTGGCATGTGTTCACCta
cataaaactgaaaatatttcacGATATTGTACTTGTTTTGTTTCTCTAGA
TTTGTTTTCCTTACTTTGAATAAGGATTATCTTAAATCTCTATTGActat
ttaaaataattttgtatttaCAAAACCCactatttattaaaaaaatttgt
acagaaatttttataggaaaattgttttttaaaaaagataactTTATCTT
ATCACGAGGCATTTTTTCCAATCCATATTTTCGAGAAAAAGTGAACAAAC
TTTTCAGTGATTAAACTATTAACTAGCATCTATCATGATCGCAGCTAAAC
AAAAACCTCCATCTTTCGAccataaattcaaaaaatgagtTCCCGCAGTC
ACATCACTAGCAACAGTATCAACCTGTGTCCGACGTCCAGGGTCACCGGG
CTTTCCTTCTTGGATGAAAACCGGTTGATCGTTTTTATCATCTATCCAGA
TCATTGAAGAGCCGCCCCATTTTGAATGCGTTGTTATGGCAACTTCAAAT
CGTTTATCTTTATTTTCAGGTGATTTTGGAATGGTAAAGACGAGCTTCAG
AGAGGATGTCGGTTTATCCGTTTTCTCAGATTTATAACAAATAACTTTAT
CAAATCTAATTGGAAAGTTAGTAGCATATTGTATTTTAAAGCCATCATTT
GAAGCCACGCTCACCTCCAAAGTGTTATGGACTGGATCTTTTTCATCGGG
TCGTATCAAGGTCCAACAATATGGTTCTGGATGTTTTGGGCCAATGAATA
AGGGGTCTGGTAACAAATACTGGTCCTGAAAATTGACAATATCACCATCG
TGTTTTATGGCGTATTGTAAAACAGCTCGCATCACGTGTCGCAGATGAAG
TAATATCAATAATGCTGATTGCGCATGCCCCTTAAGAGATGGATGGTATT
GGTCAACACTGAATAAATCAGCCAATAGAAATCCTGGTCTGGATTTAACT
AAGCCGTTACAAACCATGGCTCTCCAACTCAATGTAGGTACTTTATAATA
ACTCGCTATAGTATGTTCTTGTTGGTCTTCAAAGTTCGGACAATCTGATA
AACCAGAATTTTTATAATCGATCCCTTTAAAGAAATTCAGATAAAGTAAT
GCTGGTTTCGTTGGTAAATCAAGAATCATTCTAGTGAACCTTTCTAACGG
CCTTGCACCTTTCGTGGGAAACGTTTTATATCTATTATAATCATTAGCTG
AAAGCTCCCATATGACTAAATCAACATTCTTCTTCAGGTGGTTTTTGAca
caatatgaaaaataatctGTCCCTATAGAACCAATGGCTGCATTGTTTAC
TTTCATTTTGGAACCAGTGACAGGGAAAATCCATTGGTTCCACCAATCAA
CTACGCCCTTATAATAAAGTCCTTCTATGCTTCCACGATCTTTATATAAC
CCACCACCAGCACTTATGGAGCCACCAACTACACTCAATGTTATATCATG
ACCTGTAATAGCTTTTCGCATCACACCCTTTAATCTCTCTATGTATCCCG
GATAAACAAGTCCTGAACGAATCAGTATGGCATTCAAGTCTAGAGAAGAT
AGTGTTTTGTATGGATATCGCCAAGATTCTAAAGGGTCCTTGTTTAGGTA
TTGAACGATAGCCTTGGCTTTTTCAATATTAATGACTTTAGTTTTGTTTG
AGGGTTTAGAATTTGATGAAGCAAGTAAGTTCATCAAGTTCCCTGAGTTT
GAAATGTTTGGCTGTGATTCTAGAGCGCTTGATATAGTAACTGCAAAAGA
TTGGTTTTGCTGTTTGGCTGTTGGATCAAAGCTTGGCTTCTGCTGTTGTT
TTACACCATTTAGAATATTTGTATTTGATGATTGTTGTTTTGGTTTTGTA
GAAGCGGTTTCATTGTTTGTGGATATCGCGTTTTCTTCCATGATACTGGG
GATGGATGAATTTGCGTTATCCACCGAATCTGGATCTGACCATGTGTTGT
TTGTGAGTCGAAAATTGTTGGGTAGTTTTGGTCTGGAAATTACCAAGTCA
TCGCTATTATCGTTTTCTGTTTCACCTTTTTGTTGGCCGTCAGTGGATGA
TGATTTTTTGTCTCCAGTGCGGTGGAACTCTGTCTTTTTCTTGTAATGTT
CTTCTATGGTGTAATGTTTTGGATGAGGGTTGGTGGGTGGCATATGGTGA
AGAGAAGATATAACTATTGTTTTGTTTGTGTTGTTAGATGTCAATGATTT
ATTGTTCGTTGCAGTTGTAAATATCACGTGTCCAGgttgtttgttttgaa
taacctTATTCGTTGtcaatgttttgtttttcgttttgtttttctgtttt
tgaatgtttttagcGACCGGTTTAGCGATTTTTTTCTGCTGCTTGATTGC
TTGTTTCTTTTCGAatggtttttttggactttgtttcTCAGTTCTAATCT
CAGCAGAATTTGCAGAAGTTCCTTTGGTTGTCTCACTCTTCTCTTGACTT
GATGAAGAAACCGCTCTAATCAAATTCTTATCTTCAGTATTCAAATTCTT
CATCTTATCTCGAACTTGTTGTAACTTTGCGATATCTAAATCCAGTTCAG
TTTGAGGTGTCGAGTCTGTTTCTTCTTGATGTGGGTCATCAACACTTCTG
GTCATCTGATCTTTAGGTGTGATCACGATTACCCGCACGTGTTTATCTTT
GATCGGTTGTTTGATCTCATCCACGAATTTCTCTTGAATCTGTTCATAAC
TTCTCTCCATATCTTGATAAACCTCATCCTTTTGGACGGCATTTTCTTCC
AACGATTCTCGATCAATAATAATCGTAAACCCTTCATCGAAATCTTCGCT
GCTTCGTTTTTGAATAATTGAAGACCGTTTTTCCACAATCGGATTTATCG
GATTCTCTTGTTCGGTATCAATGACGATCAATGCGCTGTCACTTTTCTCG
TCGTAATTTTCGAGGGTTTGCTCCAACTCATTATAACTCTCTTGTTCTTG
GAGCAATGTTGGTGAGCTTGAAAGGCTTTCTTGTTGGCACGTGATTCGAC
ATGTTGAAAGGAGGAGAAACAAAGATAAGGAATGGACAAAGAGTAACATG
CTGCTCGCCTAAAAAATAAAGCAGGAAACAATGG
Run BLAST on NCBI

transcript from alignment at scaffold_231:219013..230151+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053433 ID=TCONS_00053433|Name=TCONS_00053433|organism=Clytia hemisphaerica|type=transcript|length=11139bp|location=Sequence derived from alignment at scaffold_231:219013..230151+ (Clytia hemisphaerica)
CGTGCCGATATAAGACCTGACGACCATGCTTTCGAAAAGAGTTATCACGA
TCGGCAGAAAGATCACGtgcacaaacaacaaaattattaGGATGGCGATT
CCGACAGCTATAACTTGTGATATTTCCTCTACAACAATGGATGCCATAGA
TTTGACAACAGTCGACAAAGCTATTAAAGAAATCTCCTGGTCCCAAGGAA
TAAAGGATCTGGTAGACTCCCTGCATAATGTCGATGGTATAGTAAAGTTG
TTTTGGTTTTCCTGTTACTATGTTCCCATCCTCATTCTTCTTTCTATTTC
CACTTCCATTTATCTTCCTATTCCCATTATTGTGTTCTTTTCCTCCACTT
ATGCTTTCCAATTTTGCTCTCCTCCCCATTACGCTTCCATTCTGCCTCAC
AAAAATGCAGGAGAGCTCCAATATTCgggaaaattttccccgataatcca
atttttccaaatcggAAAATCAGCAGATCGGGGGAATTTTCCTGCAAAAT
CTGATTTTATCAGgatttttttcgggaaattggggaaatcagagaaaatt
tacgtcccgattttccaaaatcaggaaatcttGTCATTCcgttttatctt
ttttcaggaaatcggaaattttttggaaatgcgggagatgtgggagaaaa
tcctgaaaatgcggGAGATGATCCTgaaaatgcgggagatttgATTGCGG
GAGTCTCTCGCCCAATGAGAGAGAGTTGACACCTATGAGACGTGTCCCTC
ATCCCTGTTCCTGTTCAAACACGTGTTCCTGTTCCCATAGATGTTCCTGT
TCCCATATGTTATATACATGTTCCTATTCCAATACATCTTCAAGTTCCCA
TTTGTATTTCCGTTCCCATTTGTGTTCCTGTTTGCATTTGTGTTCCTGTC
CCCGTACGTATTCCACATATTTGGGAAAGGAAGCACAAATGGGAACAGGA
ACACAAATAGGGAGGAGAGTGAGATGGGAAGCATAATTGGAGGATAAGAA
CATAAATCGCAACCTTCATTTCAAAAAGCCCAAGTCCACTTACCCctcaa
tttcaaaaagatctAAGTCCATTTATatgaaaataagtttttttgtattt
tctgtaTCTATGAGTCATTAGCTTTCTTTTGATACGTATAATATAAAGAT
TTCATGCTTAAAAAGgccttcaaattttttgatgaacaaTTGTGGACTAA
AGGtctgtagacttttcaaaaattcaacaaTACAGAGTGCCAAGAAAAGC
CCTTTGACACTTGGGAAATTCCCCAAatgaaccacaagtgattatttggC
AGAAGACACCTAAAAGCTTGCTAGCAGTCCTTGTGAATTTTGGACTtgca
aatgactgaaaatgggtGAACTTCAGCCACACAGGTGGTGGGTGCACCAG
AGAGCTCTGAAAAGTTGTTTATAATACACCTTTCTCTTTCTTCTCTGTTT
catataaaaagtcaccaaaatttcgagtaaacaaaccattCCATTGGCTT
AAAgcaaaaacacaaacaaaaaaatgtgcAGAGTGAGAAAAGTGTGCTTT
CTGTGCTCTTACCCTTATTCTTGCTTTTTATATGAAGCAGCTAACCTTAA
AAAGGTGCATTGATTAAACAATCTCAAATATGTTCTATAATAGATGTCTt
ctcgaaaaagttgaagagcAAAACTCACTGAACCTTCAATCTTCAATCTC
AGACAAAAAATAGCCTGATGactttgcaaaaattaatttccTTCAATGTC
GAGTGGATTTGGATTCTGGCATTGTCATCCAAACTCTCCAAATCCAATAA
AACAACACCGGCCCTGGTAAAGATGGGTTTTCAGATCATGGACCTAAGtc
catcaaaaaagaaaacttatttTAAAAAGGCCTAGTTCATTTAGGTCTCA
GCCCATATTAAGATAAAGAGTAGATGGCCTAAGTCTTTCAAAGAATCTAG
TTCACATTAAAAGGACCTAAATGGATCAAAACAGTATTGTATGGCAggtt
ttcagttttcaatgtattttggtcaatttctatGGCCTTGGTTATATACT
GTATATTCTCAAAGTTTGTGTTTTTTTAAGATCTATTCAATTATTAGCAA
ttttgtttgaagaaaaaaggttTTATGTGAAACAAAACATTCATGATTCT
CTATgatgttttcataacttatttagaaattttgtttgaagcTTAAAAAG
TTGTTGGATTTTGTGTGATGTTTCCTTtgcttttaacaaaaaaaaaacaa
acatgttCTCTGTTTCAAATGATTGATTTCGGTTCAGATCTTTGGAATTT
TGTGTTTGAAATGTATATGTTTCCCTTTTTAAGGGGGTCTGTGCCttatt
tttccaaggggttCTCGAACATTACCATAGGGGTTTATTTAATTAAGGTT
TCAAGGCCAGGGGCTATTCCAAACTAGAATACTTTAAATCAGGAATCCAA
CAGTGccagacaatttcaaaaagtataaaaagaagcataacccaaaaata
accatttccttggatttttaaataaaaaacaacaagaaaatagagTCGAT
GTTGTAGGAATATTTCGACGATCTTTATCatctatttttgtttttgtcta
tCAGACATCGCTGAATACTGTCTGTATTAGGTTATGCCATATCTTCCTTT
CTTTGGAatgtaaaactcctactcttctgGATATGCGCACTGCTCCTGTT
TTGAGAAATATTCTCTGTTTACATCCCATCTGACGAGGTTTAACAAAACC
TAAGCCAATCGgttgtgttttaaacattctttatTTCAAATCTCTATTGA
ATCTCTTTTGTTAATCCTGTTAATAGGCGAATTCTCGTCTTGAGTCACTT
TGGTCGCCTaaagcagtgcctatagaccaataTTAAATTTTGGAGTATAT
CATGGCCTactaaaaatttttatttatttatttttagtagGCCATGAGTT
TATCTGCATACACTTTGTTCGACTTGCAGAATCATGCAAAAATAATgatt
aaacaaaagaaacagtCCAGAAGTTCACCAGCTGACCTGTTCTNAGAAAT
ATTCTCCGTTTACGTCGCATGCGCACTGATGAGGTTTAACAAAACCTAAG
CCAATCGgttgtgttttaaacattctttatTTCAAATCTCTTTTGTTAAT
CTTGTTAATCCTGTTAATAGGCGAATTCCCGTCGTGAGTCACTTTGGTCG
CCTaaagcagtgcctatagaccaataTTAAATTTTGGATATAATATATGC
ATACACTTTGTTCGACTTGCAGAATCATGCAAAAATAATgattaaacaaa
agaaacagtCCAGAAGTTCACCAGTTGAACTGTTCCACTTTCTGCatact
ttctttttttgtcaaatatcaATGTCTTCAGGTTCTTTTGCTGTTGTTTC
TTGTGAGAGGGTGAAAGACtgaaaacaaaatgaaagacaTGGAAGTTGAA
GAAACTGTCAATGAAGAAGAACTTAATAATGAAACTTCGTGGTCAGAGAA
AATGCTAAAACTGACCAAATCTATTCATTCTTTCAACAGCCAAGGTATAT
AATTGTAATTCCTCACGAAAAATCTTTTCCTTCTTGTTAAAAAGATGCTT
TTCTATTTCAAACGTCAGGTTTTCATTTAGATCTTTACCTTATCTTTTGC
AATATGACAGCTATCAGTCAGTTTTATTGTGAAAATTGATCAAAACTAGT
CAAAGCTCTTCTCATCGCAGTAAGCAGGCGAACTTCAATATGGtactttg
tttttcaaaaaaaaatgtacaaGTTTAAATTAACATTGtgagaaaaatag
aaatattatatatctaaacttttcaccatcagaaagaagaaaggccaact
taaattttgagctgtcATATCTTAAATTTGCTTCACGTGTTAGTTTAAGG
TTTTAATTGCTGTAATTaggatatttcgattttaacGATTCTTTTTTGCG
GTTTTTTGTAAGCTtgattttcattctttttcgaAAGGGAATATTTTCGA
ACTTTCTTTATAACTTTTAAACACTTGAAGCAAATTAAATAAAGTATGAT
AGCTCCAAATTCAATTTAGTCTTTCCTCCTTCGAATGGCGAAATATTTGg
atttataacatttttagttttctcagGTTTTCTCACAAACTAACTAGaaa
cttgtacacttttttctGAAACACCCGTTGTTTTGAGATTATAGGCTTTT
GCTATAAAAGGTACTTTTCCGTCTGAGACCACTGTACAGTTATTTCTGTC
ATCTTGGATACTAATAACAAATTGGTCTTTCTAATTTCAGCAAACTATGA
TGATGGTATCTCTCTAAATTGTACTCCTTATTGAAACCCCTCCCTTTCCT
GACCTTTTCCTGACCCAAAATAACTGTTTCAATTTTGATGATTAATTCCT
AGCAGCCCCTTTTATCCCTTATTTATGGAATGCCTTATTTATGGAATGCC
TTATTTATGgaatgagaaagaaagaaatccAAGGTGTATGTAActtttca
ttttgtatttgctgaaaattgtttcattttaacACTACCAAGGAAAAGTC
GAATTTTTATACTCTCCAGATCTTTTAGACTTTTTAAAGGCATTGTCCAT
ACTGCTCCAAATTGTACGTaagttattattatttttttagaatcaaaGGA
TTATGTTCCATTTCTCTTGAACGATGCGCAAATCGGTTTGGTATCTCCAG
AGGTGATCAAAGAAATGTCTAAACAAAAGGCTATTTTCATCATTGCGAAG
GATTTGCTCAccggaaaaacaaaatttaccacAATGGCGCTGTCACTCAA
GGACAGGGAAGAACGTTCTACGAAGTTAGCCTGTTTCTTACGGGACCTAA
AGGACAGAGATGTGTTCCCAACCTTACGGGGTTGGAGAAATGAGGTAATC
ATATTTTCCACTCTAATCATGAATTGCACAACCTTTAGCCAAACTAATTT
TGTATCTTCTATCTTTACTTTATTAAATAAAGACCTTATACAGGACGCCT
TTTTGACACGAAAAACAAACCCATATTCTAAGTTGATAAGTATTTGATAG
GGAAAAAGATTAGGTTCGAATAGCTAGAGGATCCCTTACCTTATCGGtta
attatttcaaattgaagCAAGATTGATTAGGATTTTCTTCTCTCATAAGA
TTGCCCGCGAAATAGCCGAAAGCCCACCATATAGCAGAGATAAGTGACGT
CTTTCCGATACAAATCATTTGAGTAGGATCCGTTCTAATAAATGGGTTCG
TACGTAAAATTAGCCACAAATGGTATTATAAGAGGATGATGGTCTGTTCA
CTGTAGTGAGGGATATGAATCTATAAAACAATAAACTCATCTCTCAATCT
TAGACATACGAGGtcaaagaaagtttcaattccGAAGTTCTACTCGATGT
AGAAAGATCAGCTTGCTGTGAGTGAATGACTTGTTTTATTATTAACCATT
GAAAGAATGTAAAATCATCTTTAACCAAGGAACACAACTTATCTTTGCCG
ATGGTCCGTTCCTTTTTACACAGTACAAGAACTCTTTtcggaaatcgaaa
atttgatCTGCACATACTCGTAGTCGGCAGCAAATCTGATAAGCGTACAA
AATGTGGTTTTGATTTTGTTCAGCctcgaaaaaactaaatttcttAGATG
TCGATAGAAATTTGTGAATTTGATAGAATGGTGATAACACCGAAATATat
cgtttgattgtttttaacattttaagaatctttgaaaaatggcctcaaat
taaaacataatttaatttgattttatttcGGTCAAACCTGTGTATAACCG
CCACATTCTTTTTTCGTGCTAGGTCTCTTCGGCTTTCACACGTACGGTGT
CCACGTAAACGGGTACGTAAAGAACGATCAGGGCGACGTTTACATGTGGG
TCTNGTCCACGTAAACGGCTACGTAAAGAACGATCAGGGCGACGTTTACA
TGTGGGTCTCAAGGCGAGCGAAGACCAAGCCAACATACCCAGGAAAGCTC
GACAATACTGTAAGCTTTAACATTCGAGTCTTTGGAAGTGTTTCAATAGT
GCTAAAATGTAAGAAGGTGACATAACCATTGTTGGTTACAAAAGAATGTA
TCTTTAGGAAGATTTTGATGTTCTAACTTCTTTCACTTTCAACTCAGGTC
GCAGGTGGAATCGCTTCAGGGGAATCAGTGAAGCAAACATTGGAACGAGA
ATGCCTTGAAGAAGCGGGCATTACTGGCAAATTTTCGTCTCAAGCAAGAC
CAGCTGGGACCATCAGGTATTTCCTTAAATCAATCATAATTATGggtttt
caatattttacctCAAAACCTTTTGTAGACACAAAgatgtatttttgttt
ttcatcggttactctttttttatttttagttacTTTCTTTCAAATGAGCT
TGGCCTCCATCCGGAGACGGAATTTGTTTACGATTTGGAACTTCCCCGCT
CGTTCGAGCCAAAATGTAACGATGACGAAGTTTCCGATTTCTATCTTTTA
CCCATCAAGGAGGTAAAATCATGTTTTGTTGCTGTTCTGGTACAGGGTGG
GCAAAAATATAAATATGGTCAGACAAAAATTGTGTTACATATGGAAAGCA
ATTAGTGCCATTTTTTGCCCACCCTTTAATAACATTACTTCTCAGCTCTT
TCCTCTTACTTGTTGAAGAAGAACCGAGTGTTACTGTCTTTGAAAATATG
GATACCGTAttacttcttttaaacgcccccctcgaataaacgcccctcct
aacaaggaaaattatttaataaacgcccccctcaAATGAACGCCCCCTCT
AGGGGAAGGGTGCTTATTGgaaacttgtgactttaatacttcaataccag
tgttgattgggttggaaaaggaagattttaatcatttcttgtaaccagag
cagttttcgatgcaattttagtcgttgaaccaaagaaattttgcactaaa
atcctgatagagaactaaaacaaagggtatatttgctctaaatattcgat
tttagactaaaataatttaataaacgcccccttcttttaaacgccccggg
cgtttattcggAGTAATACGGTATATGtagaatatttttctaaatagCTT
AGAACATAACTATTTCCTTTCAAGGTAAAAGAACTTATATCAACAAAAGA
GTTCAAGCCAAACTCCGCGTTAGTGATACTGGATTTTTTGATCCGGCATG
GTTCAATTAAACCAGATGAAGGTATTCTATTTGTTGTTTGTTACTTTACC
CTCTTGAGTGAATTGTAGTGAATAAAACGATAACATTCGAAGAAAAGGTT
CTGGAAATGTAATGGAATTCTAGCTTGATTTGAGTAGAAGATTCATTCAg
gaagatttgaaaatttcaaactaccAAATAGCCGGATGGTTGaaagtttt
acttttgaaaacccaataCTAAAGGTCAAAATCAAGCTAATTTGTAAGCT
AATAACTGAAAGCATTCTTGTAAACATGGGTCCTGCGATTGAGGGCTGAA
GACAaggaaaaacaaggaaacatttttctttcattttccttttagaACCA
CATTACGTTGAGTTCGTCAAAGGTTGTCATCGGACGCTGGCCTATTGATG
AATGCGAATGGAGTATTGCATTGTTGCTGATTCTGTTCTTGTATATCTGC
TGACCAGTCATCGAACCGTATTTTCCATTGAAAATTCTACCGCCGTTGAA
TCTATGTCCGTTTCTCGGGATTAGATCACAGGAATTTTCCGATTTTGCTA
TAAAGATGCAAAATGTGACTGAGCGCTTTGGGAATATTTGAGCCAAAAAC
AAGATTCAATTAGTTGATATTATGTTTTGTAAGCCTATCCGTGCTCTTTT
ATTTTACGTGTCCCAGTGCTTTTACAACTTAACGAGTGTCACATTTGTTA
CGGGTAGTCACTAAAGGGTTTTAGGGTTTCCTGTTTTAATCATTTCAACT
TTATGCTCACTGTTCAATGTTTTGTATATCCATACAAATTATCACTAGTT
GGTATAACGTTTCTTTACAGAGAGTGATACCAATGACCTGGCATGTGTTC
ACCtacataaaactgaaaatatttcacGATATTGTACTTGTTTTGTTTCT
CTAGATTTGTTTTCCTTACTTTGAATAAGGATTATCTTAAATCTCTATTG
ActatttaaaataattttgtatttaCAAAACCCactatttattaaaaaaa
tttgtacagaaatttttataggaaaattgttttttaaaaaagataactTT
ATCTTATCACGAGGCATTTTTTCCAATCCATATTTTCGAGAAAAAGTGAA
CAAACTTTTCAGTGATTAAACTATTAACTAGCATCTATCATGATCGCAGC
TAAACAAAAACCTCCATCTTTCGAccataaattcaaaaaatgagtTCCCG
CAGTCACATCACTAGCAACAGTATCAACCTGTGTCCGACGTCCAGGGTCA
CCGGGCTTTCCTTCTTGGATGAAAACCGGTTGATCGTTTTTATCATCTAT
CCAGATCATTGAAGAGCCGCCCCATTTTGAATGCGTTGTTATGGCAACTT
CAAATCGTTTATCTTTATTTTCAGGTGATTTTGGAATGGTAAAGACGAGC
TTCAGAGAGGATGTCGGTTTATCCGTTTTCTCAGATTTATAACAAATAAC
TTTATCAAATCTAATTGGAAAGTTAGTAGCATATTGTATTTTAAAGCCAT
CATTTGAAGCCACGCTCACCTCCAAAGTGTTATGGACTGGATCTTTTTCA
TCGGGTCGTATCAAGGTCCAACAATATGGTTCTGGATGTTTTGGGCCAAT
GAATAAGGGGTCTGGTAACAAATACTGGTCCTGAAAATTGACAATATCAC
CATCGTGTTTTATGGCGTATTGTAAAACAGCTCGCATCACGTGTCGCAGA
TGAAGTAATATCAATAATGCTGATTGCGCATGCCCCTTAAGAGATGGATG
GTATTGGTCAACACTGAATAAATCAGCCAATAGAAATCCTGGTCTGGATT
TAACTAAGCCGTTACAAACCATGGCTCTCCAACTCAATGTAGGTACTTTA
TAATAACTCGCTATAGTATGTTCTTGTTGGTCTTCAAAGTTCGGACAATC
TGATAAACCAGAATTTTTATAATCGATCCCTTTAAAGAAATTCAGATAAA
GTAATGCTGGTTTCGTTGGTAAATCAAGAATCATTCTAGTGAACCTTTCT
AACGGCCTTGCACCTTTCGTGGGAAACGTTTTATATCTATTATAATCATT
AGCTGAAAGCTCCCATATGACTAAATCAACATTCTTCTTCAGGTGGTTTT
TGAcacaatatgaaaaataatctGTCCCTATAGAACCAATGGCTGCATTG
TTTACTTTCATTTTGGAACCAGTGACAGGGAAAATCCATTGGTTCCACCA
ATCAACTACGCCCTTATAATAAAGTCCTTCTATGCTTCCACGATCTTTAT
ATAACCCACCACCAGCACTTATGGAGCCACCAACTACACTCAATGTTATA
TCATGACCTGTAATAGCTTTTCGCATCACACCCTTTAATCTCTCTATGTA
TCCCGGATAAACAAGTCCTGAACGAATCAGTATGGCATTCAAGTCTAGAG
AAGATAGTGTTTTGTATGGATATCGCCAAGATTCTAAAGGGTCCTTGTTT
AGGTATTGAACGATAGCCTTGGCTTTTTCAATATTAATGACTTTAGTTTT
GTTTGAGGGTTTAGAATTTGATGAAGCAAGTAAGTTCATCAAGTTCCCTG
AGTTTGAAATGTTTGGCTGTGATTCTAGAGCGCTTGATATAGTAACTGCA
AAAGATTGGTTTTGCTGTTTGGCTGTTGGATCAAAGCTTGGCTTCTGCTG
TTGTTTTACACCATTTAGAATATTTGTATTTGATGATTGTTGTTTTGGTT
TTGTAGAAGCGGTTTCATTGTTTGTGGATATCGCGTTTTCTTCCATGATA
CTGGGGATGGATGAATTTGCGTTATCCACCGAATCTGGATCTGACCATGT
GTTGTTTGTGAGTCGAAAATTGTTGGGTAGTTTTGGTCTGGAAATTACCA
AGTCATCGCTATTATCGTTTTCTGTTTCACCTTTTTGTTGGCCGTCAGTG
GATGATGATTTTTTGTCTCCAGTGCGGTGGAACTCTGTCTTTTTCTTGTA
ATGTTCTTCTATGGTGTAATGTTTTGGATGAGGGTTGGTGGGTGGCATAT
GGTGAAGAGAAGATATAACTATTGTTTTGTTTGTGTTGTTAGATGTCAAT
GATTTATTGTTCGTTGCAGTTGTAAATATCACGTGTCCAGgttgtttgtt
ttgaataacctTATTCGTTGtcaatgttttgtttttcgttttgtttttct
gtttttgaatgtttttagcGACCGGTTTAGCGATTTTTTTCTGCTGCTTG
ATTGCTTGTTTCTTTTCGAatggtttttttggactttgtttcTCAGTTCT
AATCTCAGCAGAATTTGCAGAAGTTCCTTTGGTTGTCTCACTCTTCTCTT
GACTTGATGAAGAAACCGCTCTAATCAAATTCTTATCTTCAGTATTCAAA
TTCTTCATCTTATCTCGAACTTGTTGTAACTTTGCGATATCTAAATCCAG
TTCAGTTTGAGGTGTCGAGTCTGTTTCTTCTTGATGTGGGTCATCAACAC
TTCTGGTCATCTGATCTTTAGGTGTGATCACGATTACCCGCACGTGTTTA
TCTTTGATCGGTTGTTTGATCTCATCCACGAATTTCTCTTGAATCTGTTC
ATAACTTCTCTCCATATCTTGATAAACCTCATCCTTTTGGACGGCATTTT
CTTCCAACGATTCTCGATCAATAATAATCGTAAACCCTTCATCGAAATCT
TCGCTGCTTCGTTTTTGAATAATTGAAGACCGTTTTTCCACAATCGGATT
TATCGGATTCTCTTGTTCGGTATCAATGACGATCAATGCGCTGTCACTTT
TCTCGTCGTAATTTTCGAGGGTTTGCTCCAACTCATTATAACTCTCTTGT
TCTTGGAGCAATGTTGGTGAGCTTGAAAGGCTTTCTTGTTGGCACGTGAT
TCGACATGTTGAAAGGAGGAGAAACAAAGATAAGGAATGGACAAAGAGTA
ACATGCTGCTCGCCTAAAAAATAAAGCAGGAAACAATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033734XLOC_033734Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053433-exon-scaffold_231-1491911889:219013..219248TCONS_00053433-exon-scaffold_231-1491911889:219013..219248Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:219013..219248TCONS_00053433-exon-scaffold_231-1510915933:219013..219248Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:219013..219248TCONS_00053433-exon-scaffold_231-1575043694:219013..219248Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:223653..223906TCONS_00053433-exon-scaffold_231-1491911889:223653..223906Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:223653..223906TCONS_00053433-exon-scaffold_231-1510915933:223653..223906Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:223653..223906TCONS_00053433-exon-scaffold_231-1575043694:223653..223906Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:224366..224429TCONS_00053433-exon-scaffold_231-1491911889:224366..224429Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:224366..224429TCONS_00053433-exon-scaffold_231-1510915933:224366..224429Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:224366..224429TCONS_00053433-exon-scaffold_231-1575043694:224366..224429Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:224835..225021TCONS_00053433-exon-scaffold_231-1491911889:224835..225021Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:224835..225021TCONS_00053433-exon-scaffold_231-1510915933:224835..225021Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:224835..225021TCONS_00053433-exon-scaffold_231-1575043694:224835..225021Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:225160..225278TCONS_00053433-exon-scaffold_231-1491911889:225160..225278Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:225160..225278TCONS_00053433-exon-scaffold_231-1510915933:225160..225278Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:225160..225278TCONS_00053433-exon-scaffold_231-1575043694:225160..225278Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:225392..225524TCONS_00053433-exon-scaffold_231-1491911889:225392..225524Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:225392..225524TCONS_00053433-exon-scaffold_231-1510915933:225392..225524Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:225392..225524TCONS_00053433-exon-scaffold_231-1575043694:225392..225524Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:226137..226233TCONS_00053433-exon-scaffold_231-1491911889:226137..226233Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:226137..226233TCONS_00053433-exon-scaffold_231-1510915933:226137..226233Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:226137..226233TCONS_00053433-exon-scaffold_231-1575043694:226137..226233Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1491911889:226558..230151TCONS_00053433-exon-scaffold_231-1491911889:226558..230151Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1510915933:226558..230151TCONS_00053433-exon-scaffold_231-1510915933:226558..230151Clytia hemisphaericaexon
TCONS_00053433-exon-scaffold_231-1575043694:226558..230151TCONS_00053433-exon-scaffold_231-1575043694:226558..230151Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:219013..230151 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.0036	15.7404	50.6088	43.7174	0.804158	0.692949	1.89889	6.18154e-06	1.94645	2.34309	2.57105	1.98749	2.26184	3.29722	1.72572	1.91107	3.14588	2.95443	1.20234	1.41251	1.03866	0.548692	3.75368	4.02249	2.7116	0.873631	0.995947	0.672446	1.52127	1.53111
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053433 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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