TCONS_00053809 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053809
Unique NameTCONS_00053809
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1600

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053809 ID=TCONS_00053809|Name=TCONS_00053809|organism=Clytia hemisphaerica|type=transcript|length=1600bp
tggttcacagctcaaaaatCCAAAGCTTGGCGGAATTCAATTTCGGGGGC
TTCAGATTCTTTTCAATGTACTTGAGAGGCAGGGAAGAACTTTTGTTGAA
AGTACAAAATGAACAAGTTACATCACATCCTATCACTCAAAGATTTGTTG
AAGATGATGTCAGTAGCCAACATGGTcgagaaaatcaaaatgaatttggT
AAAGAACCAAATAATTCACACGATGATAAACCACTTCCAAGACCTTATGA
TTCAATGATGTTATCAAAGAACACTCAGAGAAAcTTGAGTGGTTTTCACT
TTTTGGACATTGGATTACCTCCAGCAAGCCCTTGTGAAACAGATGCAGCC
AATGCGGAATATTCTTCGACTTTGTTTCTGATAGCGGCTTATGCTCGGTA
CAAGAATCCTTATGTCTGGGTACGATCGAATCACCATCGATTAATTTCAT
TCACCGAGTGCCATACCTCACAAGACGAAGTCTATCAAATTCAAGACAGT
CCATTGAAATTGAAATCTACCACTAATTGGAGACATAAAGAGATCAAATT
ATGGCATATCATTGCTGAGGTGGTCAGAATCAACGTTATACCATCACCAA
GGAATCCTTTTGAGGTTGACCACACTTATTTCGATGAGCTGTCACCAGAA
GATTACATCCTGGCCACTGGTGCAATGATCTTTTTGCTACAAAGAATATT
ACTTCATGGAGATCATTCTTATCAAACTAAAGTGTCACAGGATTTGAACG
AACTCATGTTAAAACACATGAAAATGGTGCAAATGCTTGCTCCTGAGATG
CCACGATTCGAACGTtttcatcaacaacaacaaacaccTATCCATCAACA
AAATCCTACTCAACAACAAACTCAGCAACAAGTTAAACTAAATCAACAAC
AAGTTCAACAAAAAAGAGTGTTTGTGCCACCGCTCCAATATTCGTACGAG
GCTGCTGCTCAAATGAACTGAACAACTCAGCAAATTTCTTCAAAGATCCT
TTGTGGCAGAAAAGTATACGACATCCTGACGTTGAATACATAATTCAtaa
taatgacaatttttctGGAGCTCCTATTTCCTATGTGAATAATATAAATG
ACATCTTTGCTGGGATAAGAAATTCTAAATTTcctagaattttcaaaaag
aaacctatttatttagaagttactttttttatatatatatcgAATTTTGA
ATACCCCTTTAGACTTGTAAACCTTACTTCAGCtagttttaagattttga
acTTCATGTCAAATATTCAATGACATAGGAAATGACACCTTTTCGAAACC
AATACGAAGACTCCAAAATCTGACCGGTTTTCCCGATGAAAGATTAAAAC
ATCTTGATCTATCTAAGTTACTGGAGAAAATATTATATACAAAATAACGA
AGCGTCTGAACCGGGTCTGAACTAGCCACGATATTTGATGTGTATATAAG
AAGTATTTCATTGCATTTTTATTTgtatcataaaattttattacagtctt
tttttatttattgtattatcatataaaATATGTAGCATCTAggatttcga
aatatttaaATATAAGCCCTGcgataaaaaatatgttttaatttcgtact
Run BLAST on NCBI

transcript from alignment at scaffold_234:361751..373913+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053809 ID=TCONS_00053809|Name=TCONS_00053809|organism=Clytia hemisphaerica|type=transcript|length=12163bp|location=Sequence derived from alignment at scaffold_234:361751..373913+ (Clytia hemisphaerica)
tggttcacagctcaaaaatCCAAAGCTTGGCGGAATTCAATTTCGGGGTA
TGATTTTTAtaatatggcctattttgccATCAAAGACCAATTTAGaggta
attttttaaatcctgaaaATATTTGTGTTTTGCGGAATTTACCTTTGCTG
AACTGTCTAagaaccgcaaaattaaatgcctcaaaaatttgttccgcaaa
aatttcttctcttaaggtagctCTCACATCCTTTTTGAGAGATAGGGATA
TAgcctacgtcatatcttccttcgtttcgagcgttaAACTCCTACTCTTT
GGGATATGATATGAGCACTGCttatgttttgaatattgaatttctccGAA
TACATCGCATGCACACTGAGGTTTTTAAAGAACAATAGAGTTTCGAAgct
taagccaatcagctgtgttttaaacattcttttatttgaaatctctattg
ataaacatcatttgtgaaagttgtctattatgtttaaacctataagcaat
tcccggtgggggttactagtggccgcctaataatgcagtgcctatagacc
aagcgtaaggcctaaaagcccgGAGCTGtgtattgtgtagactaggaAAA
ATAAGAAGGTCAGAAGCAATGATTGAGAATTTATTTCTGTACTCAGCAGG
CAGAGttggaaaatatcttttcaataagtGATTCCACCCTCCTATTCTTT
TCAGTGACTTACTGTTTTTTTTATGTTGACTTTTTTTTATTACCAGGGCT
TCAGATTCTTTTCAATGTACTTGAGAGGCAGGGAAGAACTTTTGTTGAAA
GTACAAAATGAACAAGTTGTAAGTATTATAGCACCAGATAATTGAAGGAT
TGGCTTTCGTTTTAGGAAATGCTGTTTTGGTTtgatcttttttgaaaaac
aatatcCAAATTTTCATGGTTGCTAAGCTTGAATAAACGAAtaaaacgcc
ccctcgaataaacacctCCTCCACACGTTAATACAGTAATTGTTAATATC
AATTCTCCAGACATCACATCCTATCACTCAAAGATTTGTTGAAGATGATG
TCAGTAGCCAACATGGTcgagaaaatcaaaatgaatttggTAAAGAACCA
AATAATTCACACGATGATAAACCACTTCCAAGACCTTAGTAAGTATTAGA
TAGCTTTTGTGTTTTATTTATATGGGAGCATAGGCCCCCCCCCCCCAGAA
ATTTGGGGGTACCTAAAAATAGTGCTAAAAAAGCTAGGTACCTGGAAGTA
TTCTTAAATTTAGGGGGTACCTGATATGTTGTGTGGTACCTGCATTTTCA
TTAGTGGGGGCGGGGGCTGTTGTTTTTGTATGAAGTATTTTCCTTGACTa
acccaattttccaattttgaatcgAACCATTTCATTTCAAGACTTTATGA
AAAGGGGGTAACTCAAAGTCTGGGGCtactttagaattctaaaaGTTTTT
GGGGTACCAAAAGGATTGGGGGTACCTGAACCCTGGAGGACCCTACGGGG
AGCCCTCCTGCCTCTTTAGCAATGATAAACAATTGTTTTTGCTAGCAGTG
GCTGTTATGGAACTTGAGGATTTTTAGTAAATATATTGATTTATTTCCTC
TTATCATCTCCAGATTTTTTCTCCCCCGAGGATTTAAAAGTATTCTGCAT
TATTAATTTCGTAACCATTACTTTTAATTTCAGTGATTCAATGATGTTAT
CAAAGAACACTCAGAGAAAGTATGCATCAATATTCTGTTAACCAATATTT
TGCGTGATATCGATTTGCAAACAATTGATTCTTTATATGTAGACCATAAA
TCTTTACTGACTTGATTTGGAAGAAGCATCTGATAACagtgttgaaaatg
ttgaaatcaGTCCAGTCGAATTTTCTAACATGTATTTccatccaaataac
aaaaagccTTTAAAGCAGAATTTTCGTGAAATTGGAGTCCAACTTTAGAT
TTTCCGTACAGATTAACCAAAGTTGGTTGCAGCACTGTGATAAAGAAACA
AGCTCCAATATGAGTGTGTTAGAACTATATTCAATGTTTAAAGTAGGCCA
AACTCATCTGAATAAGGTTGATTGTTGAAGAAAACTATAATTCAGGGATG
AAAATACGGTCAGACAATATCCCACCTAAATTGCTACTTTTCCAACCAGT
CtgacccaaaaaaacataattttccATTTAAAACAACTATGGTACAATGA
CGAACATTTATTCGACCCACTTGAAATTGTCACTTCGAGTCTCATGTTCT
TTGAGTTGaatcaaaagtaatgaatggtatgtttttttttaatttctttt
agcTTGAGTGGTTTTCACTTTTTGGACATTGGATTACCTCCAGCAAGCCC
TTGTGAAACAGATGCAGCCAATGCGGTATATTAATATTTGATATTGTTTC
CTTGTGGTTGATCATCCATCCTTTAAATTGGCTTTACCCTATCCATTAGC
TCTAAATCTaacctttctataattcgaacgaaaatatttgtcccctcagc
taaaaatagacgatatcggcttaacatgaaaactcagatttgatccccga
gaattccccacaatgctttgcgcggaaaataTTTCACCGCGAACTTTTTC
ctgcgcaaagcattgtggggaattctcggggatcaaatctgagttttcat
gttaagCTGATATCGTCTATTAGTATAAAACTCTTTCagtattcgaatct
ttctcagcttcgaagaaaattcttggtcctCTGAAGATCGAATTAGCGAA
AGTGAGCTGTATTGTTATATTTCTTTATGTGAAGTCGTTCAATCAACTGA
TCATTATAAGCTTATAACAAAGCCCGAAAAGATGACGAaactcaaaaatc
aataaaaaaattaattaataattaataattaaTGAGTTTTGTATTTAAGA
CATGGAAAATTATTTATTATCTTTTCATTTTGTAGGAATATTCTTCGACT
TTGTTTCTGATAGCGGCTTATGCTCGGTACAAGAATCCTTATGTCTGGGT
ATgtgtttaatttctttttttgatttcaagtttttcttaCTATGAACCTA
TTTCTGTAGGGATTGCTGGGGAAAATACTCgtttttgctccggcctagga
gcctttaattctctcttccgacaatcgtcaagacattttttgtctgttta
tctaatccgatgatctattccgatttaacaaaaacgaatcactgattccg
ataatactgtgatttgattggccgaaagtatttagaaaaaatgGCTATCG
AAAGGTCGTGGACTGGTGAGCTGTGAATACatactggcaaatctcagtga
aaaattgatcattttcatccttattcatgatgttttggacatgatttatg
agaagttacATGGTGCGTTGTACGTTGTACTGCTACTGTATACTGAATTC
AAATACGTGTGTTTCTCATGATTTTATGCTGTAAAAATGATCTATTTTGG
ACTTTAggtcatttttcatgatgatataATTGGTGGTTGTtccttttgga
ttttcaaacttgacaatgaaactttcaaaaacacagccattgatacacag
tattttttgtggtgttatgtatggctgaaaatgatcctgttttggacttt
gttattgTCGTACTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATTAAgtctcaatgg
aaatttggaaaggcctcatccgcgaaatatttctaaacaaaactggTTAT
TTATTGGTGatttccagcgcagctggtttatttttcaattaaataGCTCA
GTTAGTTTTCAAGATTCAAATTTACtttcaactttttgaattttacataT
ACCTACGTCTTTAACCGAATCTTTTCCATAACGACGATTGGCGGCCGGTC
ATCACTCATCGATTATGTCTATATTCTCTTTTCTCTGTTACGCTTACGCT
TCTTTGTAGCATCGATACTTTGGTGCATTTTAAGTTAATGATTTTGTCTT
CGGTTGTTTGTTTTCGGTCAGCCaacttttgttttcttgttgacaaaaaa
aaagaatattcatACTAGAAAACAATTATACGGGTTTTTTTTAAGCacac
aaaaatccaaaaagctGGCTTGGAGATGCTTGGATCTAGAGATCGACAAt
catgaaaaatgcttgaaggatgcttatatcctaagccaaattttagggaa
atttcgaaaattcgtAAAATCCCAGCCAGAAACagccaaaatcgaaaaat
ataGGCTCAGATAATGCTTCACATTTGCTTAAATGATTGCCATATCCGAG
gttagatatgcttataagtgcaatgcttataaaaaacatgtgtTTAAAAC
CTTATAGGTACGATCGAATCACCATCGATTAATTTCATTCACCGAGTGCC
ATACCTCACAAGACGAAGTCTATCAAATTCAAGACAGTCCATTGAAATTG
AAATCTACCACTAATTGGAGACATAAAGGTacaaaacaagtttttttttg
aacaaaaagGTCCGGTACATTATGGTTTCGGCTGTTCCTTTTTTATAATC
TTCCAGCTTATATGTTCTTGAATTTGATTTGAAAGGATCAATAAAGGTTT
GTTATACAGAGATATTCGATTCTGTACAAATCGGGTGGAGGctcaatatg
cttagcaaaatctcattttcagccttaatttgTGCTTATTTATATGCTTT
GACTTCGATtagttgattttctttgggtttatgaaaatttaagtcGGAAC
ATCGATTCTGCTCaaagaatgaatttttttgtaatttggcgccgcaggtg
aaaatctttggtataagaaagctcaaacagctttaaaagtaaccctaaGA
AAAGCTGCATGATTTATTTTGCATTtcaggtatgcttagcattatgctta
tttttttactGAAATTGAGCCTAAGCATGATtataaattgacgtcaaata
caatTGAGTAAGGTCACATCTGATAGCGACagtcaaattcaacaaaatct
gagtttttctgaaaaatcatgaaaaatcgcTACTAGACCCACTCAAATTC
ATCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCGCTTTGCAGTCCTTCATCCTGTGCTGACGACCA
AAACGAAGAAAGTTTAACCTGCTCGAAGTGTAATCGACTAGTGCACTACA
TTTGTACAAGGCTACCAGCCTACATGATTGCAGTCTGTAAAGACGGGAGA
AGAACTGCGAACGCATGCAAATACGTGTGTCAAAATTGTGTGAAAGTAAG
TAAAGATCTTTTGGTCCTCTCCCCTCAACCTGGACCTCAACCATCCCTGC
GAACGGCCGCCGAGCTTGCAAAATTAAATGAGACGATTAAAGAAAACGAA
AAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNACAAACGAATGGAaagataagatctataaattgtaaaga
tgtaagattgtttcatagaggtcaatagacctgagaaatacacttctata
aattaaaaaaaaaaaaattataaacgttatgcttttattacaaaatgagT
GTATTCTGAGTTCTGCTGAGGTGGTCAAAATGAATGTCGTAAATGTGATA
AAATTAGCTACATATAAAGAGTTGGTCGGGGTTTTCCATATTTGGCATAT
GGATTACTTCTATCGCAAaccctcaaaatatttttgcctaactaTTTTCC
AAGGTAGTTCCCTGCCGTAAAAACGCTTACCGCGCCTATTGGTTTACCAT
TGGAAGCAACACAACATCAATTAACATCATCGACAAACAAACTTATAAAA
GCAACTAGACTTttaagaaatatacaaaaaacaACACCATATACATAGAC
GGCCTAAGATCCTTTTCATCGTCCaatatattttccaaagtcgatgATCA
AGTTACAAGTTTTAACTTTTAGTAAGAACTGTGTAAGAACccaattttag
aaatttctgaGGATTTATAATATGTATTTGTTCTTTGTAGAGATCAAATT
ATGGCATATCATTGCTGAGGTGGTCAGAATCAACGTTATACCATCACCAA
GGAATCCTTTTGAGGTTGACCACACTTATTTCGATGAGCTGTCACCAGAA
GATTACATCCTGGCCACTGGTGCAATGATCTTTTTGCTACAAAGAATATT
ACTTCATGGAGATCATTCTTATCAAACTAAAGGTATATTCACcatttcaa
aaatatcttttcaacgtcCAACCAACGTTTATAACGCCTACATAACGTTA
CGTTTATACTNcccaaaatatcttttcaacgtcCATCCAACGTTTATAAC
GCCTACATAACGTTACTTTTATACTTTAATAGGATACATTTATGCGGGAA
TTAAATTTCACCGATGGCACTATTGGGAGACAACGTTTTCATGATCTTGC
GCCTTTTACAACCAAAGCATGTTGATTAGTtgataaacatttaaaaagta
atacttgacatttttttcagttttgctTAAAAGTATTTCGCGGATAAgac
cttttcaaattttcatttggaCTTTATTTcacggatgacacccaaatccg
aaaaatccgcgaaatttaatccccgcataTCTCCGTGAAAATTTATCTTA
TTAAAGTAGCCTTTTCCAAGTGCTTATTCTTCTCTaattttcttgtttct
tttcCAAGATTGGCCTTCTTTAAAAGGGATTCTTTGAATTCCAGGCATTA
GGCATAATAAccgcttgaagttcaaaaacataccgacggTCCCCTACTAT
AAGAGTTATtaaaaagcagttttttcttTCTGTTGTTTTTCTCAGTGTCA
CAGGATTTGAACGAACTCATGTTAAAACACATGAAAATGGTGCAAATGCT
TGCTCCTGAGATGCCACGATTCGAACGTtttcatcaacaacaacaaacac
cTATCCATCAACAAAATCCTACTCAACAACAAACTCAGCAACAAGTTAAA
CTAAATCAACAACAAGTTCAACAAAAAAGAGTGTTTGTGCCACCGCTCCA
ATATTCGTACGAGGCTGCTGCTCAAATGAACTGAACAACTCAGCAAATTT
CTTCAAAGATCCTTTGTGGCAGAAAAGTATACGACATCCTGACGTTGAAT
ACATAATTCAtaataatgacaatttttctGGAGCTCCTATTTCCTATGTG
AATAATATAAATGACATCTTTGCTGGGATAAGAAATTCTAAATTTcctag
aattttcaaaaagaaacctatttatttagaagttactttttttatatata
tatcgAATTTTGAATACCCCTTTAGACTTGTAAACCTTACTTCAGCtagt
tttaagattttgaacTTCATGTCAAATATTCAATGACATAGGAAATGACA
CCTTTTCGAAACCAATACGAAGACTCCAAAATCTGACCGGTTTTCCCGAT
GAAAGATTAAAACATCTTGATCTATCTAAGTTACTGGAGAAAATATTATA
TACAAAATAACGAAGCGTCTGAACCGGGTCTGAACTAGCCACGATATTTG
ATGTGTATATAAGAAGTATTTCATTGCATTTTTATTTgtatcataaaatt
ttattacagtctttttttatttattgtattatcatataaaATATGTAGCA
TCTAggatttcgaaatatttaaATATAAGCCCTGcgataaaaaatatgtt
ttaatttcgtact
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033957XLOC_033957Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053809-exon-scaffold_234-1491911889:361751..361797TCONS_00053809-exon-scaffold_234-1491911889:361751..361797Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:361751..361797TCONS_00053809-exon-scaffold_234-1510915933:361751..361797Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:361751..361797TCONS_00053809-exon-scaffold_234-1575043694:361751..361797Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:362497..362568TCONS_00053809-exon-scaffold_234-1491911889:362497..362568Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:362497..362568TCONS_00053809-exon-scaffold_234-1510915933:362497..362568Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:362497..362568TCONS_00053809-exon-scaffold_234-1575043694:362497..362568Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:362761..362888TCONS_00053809-exon-scaffold_234-1491911889:362761..362888Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:362761..362888TCONS_00053809-exon-scaffold_234-1510915933:362761..362888Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:362761..362888TCONS_00053809-exon-scaffold_234-1575043694:362761..362888Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:363434..363469TCONS_00053809-exon-scaffold_234-1491911889:363434..363469Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:363434..363469TCONS_00053809-exon-scaffold_234-1510915933:363434..363469Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:363434..363469TCONS_00053809-exon-scaffold_234-1575043694:363434..363469Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:364053..364125TCONS_00053809-exon-scaffold_234-1491911889:364053..364125Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:364053..364125TCONS_00053809-exon-scaffold_234-1510915933:364053..364125Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:364053..364125TCONS_00053809-exon-scaffold_234-1575043694:364053..364125Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:364686..364748TCONS_00053809-exon-scaffold_234-1491911889:364686..364748Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:364686..364748TCONS_00053809-exon-scaffold_234-1510915933:364686..364748Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:364686..364748TCONS_00053809-exon-scaffold_234-1575043694:364686..364748Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:367358..367478TCONS_00053809-exon-scaffold_234-1491911889:367358..367478Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:367358..367478TCONS_00053809-exon-scaffold_234-1510915933:367358..367478Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:367358..367478TCONS_00053809-exon-scaffold_234-1575043694:367358..367478Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:372241..372432TCONS_00053809-exon-scaffold_234-1491911889:372241..372432Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:372241..372432TCONS_00053809-exon-scaffold_234-1510915933:372241..372432Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:372241..372432TCONS_00053809-exon-scaffold_234-1575043694:372241..372432Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1491911889:373046..373913TCONS_00053809-exon-scaffold_234-1491911889:373046..373913Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1510915933:373046..373913TCONS_00053809-exon-scaffold_234-1510915933:373046..373913Clytia hemisphaericaexon
TCONS_00053809-exon-scaffold_234-1575043694:373046..373913TCONS_00053809-exon-scaffold_234-1575043694:373046..373913Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:361751..373913 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.98526	3.40362	1.70237	1.32233	13.4415	8.30831	5.94609	6.39387	4.06281	7.25612	4.40842	3.59584	4.03662	2.83776	2.26589	3.30514	3.78064	5.27653	1.97852	3.27755	4.4757	4.65509	5.21374	6.4177	8.44822	7.67999	4.74214	5.43223	5.53762	3.1765
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053809 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top