TCONS_00053812 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053812
Unique Name	TCONS_00053812
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2676

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_234:438946..445697+
coding sequence from alignment at scaffold_234:438946..445697+

transcript sequence

>TCONS_00053812 ID=TCONS_00053812|Name=TCONS_00053812|organism=Clytia hemisphaerica|type=transcript|length=2676bp
CTTAACTTTTCTTACAGGAGATCAACCAAAGGTCAACAAATTCCGGAAAA
ATCATCTGCGGTGGAAAGAAAACAAATATGGCGGCGTGATGTTCTTGCTG
CCCAAAGTGGTATCAACCATAGAAATAAACTACTGATTGTACTTTTTCTC
AAATTATCATACACAAATATAAGCGAATTGCCACCAGATTTAAAATGGAA
GCGAATGTTTGGTTTGATTTACAGTATCATTCAACGCAACTTAGAAGACA
TGTCAGTAAAAGCACCCCTTTTAAACAGCATTACTTTTCCAGCACTTGAG
CCTCAATCAGGAATTCCAAGACAAGCAATCTTAAAGCTACCACACACACT
TAACAAGGGGTCTCCATGGAAGTTTGAACAAGCTGGTGATATTTCAAAAT
ACCTTTGTCAATGGCTCTTGGTCTACACAACCCAAAATCCTGGCTCAAGT
GGAAAGAAATCTCTCTTCCAAAACAAGTCCCCTAATGTTTCGCAAACCAA
TACGGCAGTTATGGAAATAGACGGATCACCATGTCGCGATATTTTCACAG
TTCTCAACATTAGTAAAAATTACATCAAAGAACACATGTTAAACCTCTAC
ACATTCGCTGTCCTCAAATCATGGCTTGAGTTTGCTTTATCACAGGAAGA
TATGACTGATTGCTTAACAAGCACTTTACCAAAATTCCCAACAACTAAAG
GAACGCCAAAAGGAGCATCATACTCAGATAGTCCCTTATCAGCATTCGGC
GCTAGTCAGTTTTATGACGTTGATTCTGAAAGCTCGACCGAGTCCCCTTC
AGTGTCATCCTCATTTGCTTCATCCCCAGTCTTTTCCCAATTCGACGAAT
TAACCAACGAGCAATTTGACCGGCGCCGAACATTCGATCAAATGTCTCTA
CGTTCAGCCACACCATCGTTCATAGCTACACCACGTAAAACAAGCCAAGC
TTTCGATACTGTCTCTATTACTTCAGATATCTTTTCAAATGCATCCAATT
TGAAGAATGTAGCGGCAAAATATTGCTTGAGAATCATTTTACAATCAGAA
CGAGGCCCATTGAAAGATACTGACCGAGCAATGGTAACTGCTAGTGTGGT
TGAAGCGATCCAAATCCTGGACTTGCTTTGCAAAGAAGAATGTACATTTA
CTCAAAAGGTGTTCAATGAGATCAAGAAGCTGTACCGTCGTTTAGAGGAG
AAACCTGTAGCTGCTCGTCGAGTGTTGGTTGCTCTTGTTCAGTTCTACAT
CAATCACCACGAGGAAATGATGATCCAGGTCGAAGAAATCCTtgaaatct
atttcaaaaacattcccaAACATTTATACACAAGTCAAACGACTGGTTTT
GAAATCTACGAGCtatgtttgaaaaataaagagttTTTTAAATTCCATCC
TGAAGTGTTGGTTAAATATGTGCCCAATCTGTTTCGTTTCGCTGCATGGT
GGCCTTGTAATTTCATGGAAGAAATCTGTGAGATTCTATCCTTGATTTTA
AACCAATCGACTGCTGCTGAGATTCTGCATTTGATCCTGGATCTACCTTG
CCTGACAGCTTTGTTGCAACTAAGCCATGACGGTTTTATTGAGGATCCAG
TGAAGCTTGGTGAACGCTTGAAAACCGACTTACCGCCTTATTCGAAAGCa
ttattcaattttattttacgTGACAAACTCATGGGAGTTGAAACCATTGA
TAAAATTCCAGAGCTTCACCGACTGTTAGGCGAATTCAGCCAAGATCCTT
TGGTTAAGTACGTGACTGACATCCTACCACCATTGCTGGTGACTTATATG
TCAATCATTGAAGAATTGGATTCTGAAGAAGTGTACAAGAAGATCTTCCC
AATCTTAATCGAGCGTACATACCAATTGTTCCCTGTAGATGCCGAGCATG
GTAAAATATTAGAGATCTTTGGCACTGAGATCAAATCAATTGCTGAATGG
TACCCAGAAGTCATTTCCCTTCATAGTGGTGAGATCATCTCCTTTCTAAC
ACTGTTCCGAAACAGTACATCTGTCCAGAAATCATCCAACATTGTCAATG
CTGTGTTACACGCTATTGGAGATTCTGTTTCTGCAATGGATAACGCTATT
TTATCCAGTTTTTACGATACCATTGAAGAACTAGCTTACGAAGCTTTGAA
TGGGATGaattctaataaagaatatataTTATCAAGCATGGAGATCTTAC
AGAGTCTTTTAGCGACTATATCTAAGATAGCTGCGCATGCTCAAGAACAT
ATTCAACGGGCCGTTGTCTGTTTAAACAAAGTGGTCAGCTTTGTTGCAGA
TTCACCGCTTTTCGTCAACCTTAAAAGTTATGCTCAGGAACTGACAAACA
TGTTGAATAGACCACAAGTAGCACCGGCTATTCTTTGTAAACGATCGGGT
GTTGTCCCTTGGCACCTGACCGGCGACTCCTCTTTGATGTTGAAAATTCA
TGTGTTGTCTCAATAGAGTTTAAacaattttaatttctttttagttttta
aattatatgaagtatagaatttttgactgaagattGTAACGAAAGGTTGC
GTGAAACTTTGCTTATTAATAATTCTAATCCCAACTTCCATTTATTGTtt
agttttgaaattaaatgttttggtTGCCAAATGTCTTACAAAGTAAAAAG
TTGAGCACTTTCTTTTTGTATATAAG

Run BLAST on NCBI

protein sequence of TCONS_00053812-protein

>TCONS_00053812-protein ID=TCONS_00053812-protein|Name=TCONS_00053812-protein|organism=Clytia hemisphaerica|type=polypeptide|length=821bp
LNFSYRRSTKGQQIPEKSSAVERKQIWRRDVLAAQSGINHRNKLLIVLFL
KLSYTNISELPPDLKWKRMFGLIYSIIQRNLEDMSVKAPLLNSITFPALE
PQSGIPRQAILKLPHTLNKGSPWKFEQAGDISKYLCQWLLVYTTQNPGSS
GKKSLFQNKSPNVSQTNTAVMEIDGSPCRDIFTVLNISKNYIKEHMLNLY
TFAVLKSWLEFALSQEDMTDCLTSTLPKFPTTKGTPKGASYSDSPLSAFG
ASQFYDVDSESSTESPSVSSSFASSPVFSQFDELTNEQFDRRRTFDQMSL
RSATPSFIATPRKTSQAFDTVSITSDIFSNASNLKNVAAKYCLRIILQSE
RGPLKDTDRAMVTASVVEAIQILDLLCKEECTFTQKVFNEIKKLYRRLEE
KPVAARRVLVALVQFYINHHEEMMIQVEEILEIYFKNIPKHLYTSQTTGF
EIYELCLKNKEFFKFHPEVLVKYVPNLFRFAAWWPCNFMEEICEILSLIL
NQSTAAEILHLILDLPCLTALLQLSHDGFIEDPVKLGERLKTDLPPYSKA
LFNFILRDKLMGVETIDKIPELHRLLGEFSQDPLVKYVTDILPPLLVTYM
SIIEELDSEEVYKKIFPILIERTYQLFPVDAEHGKILEIFGTEIKSIAEW
YPEVISLHSGEIISFLTLFRNSTSVQKSSNIVNAVLHAIGDSVSAMDNAI
LSSFYDTIEELAYEALNGMNSNKEYILSSMEILQSLLATISKIAAHAQEH
IQRAVVCLNKVVSFVADSPLFVNLKSYAQELTNMLNRPQVAPAILCKRSG
VVPWHLTGDSSLMLKIHVLSQ

Run BLAST on NCBI

transcript from alignment at scaffold_234:438946..445697+

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053812 ID=TCONS_00053812|Name=TCONS_00053812|organism=Clytia hemisphaerica|type=transcript|length=6752bp|location=Sequence derived from alignment at scaffold_234:438946..445697+ (Clytia hemisphaerica)
CTTAACTTTTCTTACAGGAGATCAACCAAAGGTCAACAAATTCCGGAAAA
ATCATCTGCGGTGGAAAGAAAACAAATATGGCGGCGGTAAGTGGTCAAGC
TTTCACAGACAGGGAACTTTATACAGTTTGCAAAACTTTATTAGCCAAAT
TTGAAGAAGTTAAATCGGGAAAGAAGGTATCAATCACAACAGAACTGAAA
TCTGCTGTAAGATTAATTTTATATGGAGCCAAACCTGGATCATTGCaccc
aaatttcaagaaaacaatctttgaatttctttgtCATTTGACCACTTTCA
GTGATGTTCTTGCTGCCCAAAGTGGTATCAACCATAGAAATAAACTACTG
ATTGTACTTTTTCTCAAATTATCATACACAAATATAAGCGAATTGCCACC
AGATTTAAAATGGAAGCGAATGTTTGGTTTGATTTACAGTATCATTCAAC
GCAACTTAGAAGACATGTCAGTAAAAGCACCCCTTTTAAACAGCATTACT
TTTCCAGCACTTGAGCCTCAATCAGGAATTCCAAGACAAGCAATCTTAAA
GCTACCACACACACTTAACAAGGGGTCTCCATGGAAGTTTGAACAAGCTG
GTGATATTTCAAAATACCTTTGTCAATGGCTCTTGGTCTACACAACCCAA
AATCCTGGCTCAAGTGGAAAGAAATCTCTCTTCCAAAACAAGTCCCCTAA
TGTTGTAAGTAATTTCATTTTATTACCTTTAGTTAAAAATAATACCTATA
AGGCTAAATGGTTTTAAAAATCTTTGGATGCACAAAAGTGGTAGAGTATA
CACCATgagtaacctgagatcagattgtggttgttttctgcccaccacgc
tgaagctctaaagggatgggtgaaaacatacaatctgacgaatatgcaat
ctcgaaatcgtaaggaccgcgttggtctaaaaggactggggatgacaaca
aagttgcatGATTGTGTTTGTGAATAGGGcaccgtatcagtttttgactt
tctggcgcacaacaagattcttgttgtagaattttccgcgggaggactat
tttcctcagatgtataattttcaagtgtctttagaggtttaccgtgcatg
taagaaaattatgaacagctgttatcaagTTAATCATGAGTGGttctaaa
tccgacagcccaaCCTAAATccaatggggtctttcaaagatacaaacagt
ttcagtgtagacctaactcttcataaaaaaattacgggaaacacatattt
ggactttgtaccctatgctgcacgccaGCACTTAAGCTGAAATCCCGGAA
AAGCGggataaaaatcagttttttgcagtttgcataaaaacgccacatag
aagatctttcaaattcagtatgtgaatagaccttttttcaaagaggccac
cctgttgaataattatgtagtccagcagaaaaacaatgataaaaccatgc
ataattattacaatatacaTGATACAGNNcagtaaaaaataaaacttttc
tatttttccttttttttgcaaaagttctagaaatgaaaataaaaggataa
ttgaatactatccactgatgatccgaggcgccatcgtaaagctagaatcg
cttcgcgtactcttcgcttgaaaaaatgattgacagattaaatttttcac
ccgcgcaggaatTCGGGGACGTTCTGCGAGCGGTCTGCAAGCGTTCtcag
ctcaatcctcggaccgtgttaaaaatggtagactcagctgtgacagatca
tttcgatggaagttgttggaatgtttacaagactcttgaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNcagatcatttcgatggaagttgttggaatgtttata
agactcttgacagaaaatcttttgttttattgtcaatgatgacagtgccg
ttattaattttgttagatctgatatattgatgtttgtaagtgcacttttt
acaattttagttttgattcccattgaagaatcatattctggttttcatgt
tattagatgctattttagagctttagagctacactgacaaactaaaataa
aaacaaaccttttgctgtgacgcaacgaagataccaaagtgtcaactaag
ctgagaaatttgatacactgaaccaaatAGCAATAATTGcttttatacaa
aacataattttttattacaaaattgttcaaatttttaacgttaaacatga
gcaacggattcagaatacagaaaagaggtaattatttttacaactcacac
gttttttatcactttaattgagatcttgacattatagtcatatTGTTAGA
TGTTTAGTttcaagagttcttgcaatagtttattgttcaacttggagagg
gaatgtttgtaaacatagaattttttcataacatttatttggggggtcag
atttaggcagggctgttggatttaggaccactcacagtaAATGTTTCTAT
TcatctatatatttaagtaacATTAGGCCCGAAGGCCCATACGCCCTACA
CAGATTTTCTGtttaaaaatcaggaaaattaaaaaaaagttaatttttgt
aATAAGTGTTATACTTAAAATGACTTAAAAGGACCACATTCTTTTAGTCA
GTGAATTATCCTTGTGTGAAAAATTCAAGTAtaagaaaatgatattttcg
CAACATcttcaaatttaccaaacaaaaATACATTGTTCTGTGTTTTTCAG
AAATGttgttctggtctgtattttttcGAATAAGAGAAGAAGGAAGACAA
CATAGATCATAGATCATGATAAAAGAAATAGTTGATTTCAGTACCTTTGG
GAAAATGAGTATTGCGACTATATTGTTTTATGGCAATCTTAAATCTGATT
TTTGTAAATGATTAATTGAAGGCTTTAGTATCATTTTATCATgaactcaa
aaaattattttgtaaaattcAGGGCAAACAGGGGTGCCCATAAGTAGCCG
AATTGGGGCCCCGATTAGGGTACCCTATAAGGATCGATTTTAAAGAAGGT
TTTTCAAAATCGGATAATGTTGGAAGTGTTTGATTAAGATCCCTCAAAAT
AGTTGTTTAGGAGAACGTGACAGTATATTGAATAGAAAATTAGTCCAGCa
tacacttgaaattttcactagatatttgtttatttattgttCTCTATCGG
ATAAAGGAAAAACCACGGTATCTTTAAACAtcattgatttttctttatat
aaCTATGGCAGCCTTGAGAATTTCTTTGTTATGGGGGTAACTTTCATCAG
TTTCATAAcagaaaaccttttgaaaacaattccttgtattttcaaaggga
aATAGTCTTAAACAATTTCTtgcattttcaaaggaaaatataaTAGTCTT
AAACAGATTCCTTGTGTTTCCCAAGGAAAATAATAGTAAGTTGTAAACAA
TTCCTtgtattttcaaatgaaaacgaTTCCTTGTTTTTTTGGACATTATG
ATTAAAACCTTCTAAGGCAGTCTaaggtgactttgaaagacctttgaaaa
attgaaaagcaGTGCCATGAACTAAATGGTTAATATGCAAAATCTGAGAT
ATGATTTTGATATAAGCATATTGTGATAATTATATATTACAAAAATATTC
TCTTGAGGAGATGTATAAAGAAAAGTGAAAGTTTAAAAGGGTTTAATGAA
AAATCTTATCTACGGCTTTAGCAGGGATTGTATTGAATGGTCGAGTTAAG
TTGAAATGTTCAAACCTCTgatataaaaatttctttgaaaatttttacga
ctttaaaaaaattctacacTAAAACGAAGAAAGAAGTATATGTGTATGAA
CTTTATTTTGATTGGATTGTGTTTATATCTTTCTGAATCTTTGATGTTTG
GGACTTTGCTTATTGCAAATTTGTAATTAATATTTCAAATATGATATTCT
CCTATATTCCTTGGGTCTAAAGTTGAAATTCTCCTAAATTAAATCGGCAA
AGTATTTTAATTTAAAGACAGCTTTAcctttttttgaatgttttgaatat
ctgaaacaatttaaaacagaaacttattttattttacattctAGTCGCAA
ACCAATACGGCAGTTATGGAAATAGACGGATCACCATGTCGCGATATTTT
CACAGTTCTCAACATTAGTAAAAATTACATCAAAGAACACATGTTAAACC
TCTACACATTCGCTGTCCTCAAATCATGGCTTGAGTTTGCTTTATCACAG
GAAGATATGACTGATTGCTTAACAAGCACTTTACCAAAATTCCCAACAAC
TAAAGGAACGCCAAAAGGAGCATCATACTCAGATAGTCCCTTATCAGCAT
TCGGCGCTAGTCAGTTTTATGACGTTGATTCTGAAAGCTCGACCGAGTCC
CCTTCAGTGTCATCCTCATTTGCTTCATCCCCAGTCTTTTCCCAATTCGA
CGAATTAACCAACGAGCAATTTGACCGGCGCCGAACATTCGATCAAATGT
CTCTACGTTCAGCCACACCATCGTTCATAGCTACACCACGTAAAACAAGC
CAAGCTTTCGATACTGTCTCTATTACTTCAGATATCTTTTCAAATGCATC
CAATTTGAAGAATGTAGCGGCAAAATATTGCTTGAGAATCATTTTACAAT
CAGAACGAGGCCCATTGAAAGATACTGACCGAGCAATGGTAACTGCTAGT
GTGGTTGAAGCGATCCAAATCCTGGACTTGCTTTGCAAAGAAGAATGTAC
ATTTACTCAAAAGGTATTTATACACCTGACTTTTAATTCAAAAGAGTGCT
CAATACTTGTTATCTGTAAAGCTAGAGCCTTATCatacttaaaaaaaatg
aaaggagaaacttttttccaataCTCAAAGTTTCTTGCTTTCTCAAGCAT
TCGCCAGTTCATTCCACAAACGGATTAAATCGttaatttcttttgatagt
tTAATCTAGTCTGTGTCAAAAAAGGTgtgcagtgtttttatttttaacca
TAACTTTCCAATAGTTTGTTGTATAGTAAAAGGTTTgggtttggtatcgt
tggaaagctatTCAAATTCGCTTACATTACTATCCACTCGTTTGTGTGtc
aaaattccttcaaaaagtgaagcaaaatgCAGAAGAAAATATGAACTTTT
TGTAGAATAGCgctatttaaaaattctaggacgGAAGAATGGATCTAAAT
TACCCGATCTCTGTTAATCTATTCTCGTTTGCAGGTGTTCAATGAGATCA
AGAAGCTGTACCGTCGTTTAGAGGAGAAACCTGTAGCTGCTCGTCGAGTG
TTGGTTGCTCTTGTTCAGTTCTACATCAATCACCACGAGGAAATGATGAT
CCAGGTCGAAGAAATCCTtgaaatctatttcaaaaacattcccaAACATT
TATACACAAGTCAAACGACTGGTTTTGAAATCTACGAGCtatgtttgaaa
aataaagagttTTTTAAATTCCATCCTGAAGTGTTGGTTAAATATGTGCC
CAATCTGTTTCGTTTCGCTGCATGGTGGCCTTGTAATTTCATGGAAGAAA
TCTGTGAGATTCTATCCTTGATTTTAAACCAATCGACTGCTGCTGAGATT
CTGCATTTGATCCTGGATCTACCTTGCCTGACAGCTTTGTTGCAACTAAG
CCATGACGGTTTTATTGAGGATCCAGTGAAGCTTGGTGAACGCTTGAAAA
CCGACTTACCGCCTTATTCGAAAGCattattcaattttattttacgTGAC
AAACTCATGGGAGTTGAAACCATTGATAAAATTCCAGAGCTTCACCGACT
GTTAGGCGAATTCAGCCAAGATCCTTTGGTTAAGTACGTGACTGACATCC
TACCACCATTGCTGGTGACTTATATGTCAATCATTGAAGAATTGGATTCT
GAAGAAGTGTACAAGAAGATCTTCCCAATCTTAATCGAGCGTACATACCA
ATTGTTCCCTGTAGATGCCGAGCATGGTAAAATATTAGAGATCTTTGGCA
CTGAGATCAAATCAATTGCTGAATGGTACCCAGAAGTCATTTCCCTTCAT
AGTGGTGAGATCATCTCCTTTCTAACACTGTTCCGAAACAGTACATCTGT
CCAGAAATCATCCAACATTGTCAATGCTGTGTTACACGCTATTGGAGATT
CTGTTTCTGCAATGGATAACGCTATTTTATCCAGTTTTTACGATACCATT
GAAGAACTAGCTTACGAAGCTTTGAATGGGATGaattctaataaagaata
tataTTATCAAGCATGGAGATCTTACAGAGTCTTTTAGCGACTATATCTA
AGATAGCTGCGCATGCTCAAGAACATATTCAACGGGCCGTTGTCTGTTTA
AACAAAGTGGTCAGCTTTGTTGCAGATTCACCGCTTTTCGTCAACCTTAA
AAGTTATGCTCAGGAACTGACAAACATGTTGAATAGACCACAAGTAGCAC
CGGCTATTCTTTGTAAACGATCGGGTGTTGTCCCTTGGCACCTGACCGGC
GACTCCTCTTTGATGTTGAAAATTCATGTGTTGTCTCAATAGAGTTTAAa
caattttaatttctttttagtttttaaattatatgaagtatagaattttt
gactgaagattGTAACGAAAGGTTGCGTGAAACTTTGCTTATTAATAATT
CTAATCCCAACTTCCATTTATTGTttagttttgaaattaaatgttttggt
TGCCAAATGTCTTACAAAGTAAAAAGTTGAGCACTTTCTTTTTGTATATA
AG

Coding sequence (CDS) from alignment at scaffold_234:438946..445697+

>TCONS_00053812 ID=TCONS_00053812|Name=TCONS_00053812|organism=Clytia hemisphaerica|type=CDS|length=9864bp|location=Sequence derived from alignment at scaffold_234:438946..445697+ (Clytia hemisphaerica)
CTTAACTTTTCTTACAGGAGATCAACCAAAGGTCAACAAATTCCGGAAAA
ATCATCTGCGGTGGAAAGAAAACAAATATGGCGGCGTGATGTTCTTGCTG
CCCAAAGTGGTATCAACCATAGAAATAAACTACTGATTGTACTTTTTCTC
AAATTATCATACACAAATATAAGCGAATTGCCACCAGATTTAAAATGGAA
GCGAATGTTTGGTTTGATTTACAGTATCATTCAACGCAACTTAGAAGACA
TGTCAGTAAAAGCACCCCTTTTAAACAGCATTACTTTTCCAGCACTTGAG
CCTCAATCAGGAATTCCAAGACAAGCAATCTTAAAGCTACCACACACACT
TAACAAGGGGTCTCCATGGAAGTTTGAACAAGCTGGTGATATTTCAAAAT
ACCTTTGTCAATGGCTCTTGGTCTACACAACCCAAAATCCTGGCTCAAGT
GGAAAGAAATCTCTCTTCCAAAACAAGTCCCCTAATGTTTCGCAAACCAA
TACGGCAGTTATGGAAATAGACGGATCACCATGTCGCGATATTTTCACAG
TTCTCAACATTAGTAAAAATTACATCAAAGAACACATGTTAAACCTCTAC
ACATTCGCTGTCCTCAAATCATGGCTTGAGTTTGCTTTATCACAGGAAGA
TATGACTGATTGCTTAACAAGCACTTTACCAAAATTCCCAACAACTAAAG
GAACGCCAAAAGGAGCATCATACTCAGATAGTCCCTTATCAGCATTCGGC
GCTAGTCAGTTTTATGACGTTGATTCTGAAAGCTCGACCGAGTCCCCTTC
AGTGTCATCCTCATTTGCTTCATCCCCAGTCTTTTCCCAATTCGACGAAT
TAACCAACGAGCAATTTGACCGGCGCCGAACATTCGATCAAATGTCTCTA
CGTTCAGCCACACCATCGTTCATAGCTACACCACGTAAAACAAGCCAAGC
TTTCGATACTGTCTCTATTACTTCAGATATCTTTTCAAATGCATCCAATT
TGAAGAATGTAGCGGCAAAATATTGCTTGAGAATCATTTTACAATCAGAA
CGAGGCCCATTGAAAGATACTGACCGAGCAATGGTAACTGCTAGTGTGGT
TGAAGCGATCCAAATCCTGGACTTGCTTTGCAAAGAAGAATGTACATTTA
CTCAAAAGGTGTTCAATGAGATCAAGAAGCTGTACCGTCGTTTAGAGGAG
AAACCTGTAGCTGCTCGTCGAGTGTTGGTTGCTCTTGTTCAGTTCTACAT
CAATCACCACGAGGAAATGATGATCCAGGTCGAAGAAATCCTtgaaatct
atttcaaaaacattcccaAACATTTATACACAAGTCAAACGACTGGTTTT
GAAATCTACGAGCtatgtttgaaaaataaagagttTTTTAAATTCCATCC
TGAAGTGTTGGTTAAATATGTGCCCAATCTGTTTCGTTTCGCTGCATGGT
GGCCTTGTAATTTCATGGAAGAAATCTGTGAGATTCTATCCTTGATTTTA
AACCAATCGACTGCTGCTGAGATTCTGCATTTGATCCTGGATCTACCTTG
CCTGACAGCTTTGTTGCAACTAAGCCATGACGGTTTTATTGAGGATCCAG
TGAAGCTTGGTGAACGCTTGAAAACCGACTTACCGCCTTATTCGAAAGCa
ttattcaattttattttacgTGACAAACTCATGGGAGTTGAAACCATTGA
TAAAATTCCAGAGCTTCACCGACTGTTAGGCGAATTCAGCCAAGATCCTT
TGGTTAAGTACGTGACTGACATCCTACCACCATTGCTGGTGACTTATATG
TCAATCATTGAAGAATTGGATTCTGAAGAAGTGTACAAGAAGATCTTCCC
AATCTTAATCGAGCGTACATACCAATTGTTCCCTGTAGATGCCGAGCATG
GTAAAATATTAGAGATCTTTGGCACTGAGATCAAATCAATTGCTGAATGG
TACCCAGAAGTCATTTCCCTTCATAGTGGTGAGATCATCTCCTTTCTAAC
ACTGTTCCGAAACAGTACATCTGTCCAGAAATCATCCAACATTGTCAATG
CTGTGTTACACGCTATTGGAGATTCTGTTTCTGCAATGGATAACGCTATT
TTATCCAGTTTTTACGATACCATTGAAGAACTAGCTTACGAAGCTTTGAA
TGGGATGaattctaataaagaatatataTTATCAAGCATGGAGATCTTAC
AGAGTCTTTTAGCGACTATATCTAAGATAGCTGCGCATGCTCAAGAACAT
ATTCAACGGGCCGTTGTCTGTTTAAACAAAGTGGTCAGCTTTGTTGCAGA
TTCACCGCTTTTCGTCAACCTTAAAAGTTATGCTCAGGAACTGACAAACA
TGTTGAATAGACCACAAGTAGCACCGGCTATTCTTTGTAAACGATCGGGT
GTTGTCCCTTGGCACCTGACCGGCGACTCCTCTTTGATGTTGAAAATTCA
TGTGTTGTCTCAATAGCTTAACTTTTCTTACAGGAGATCAACCAAAGGTC
AACAAATTCCGGAAAAATCATCTGCGGTGGAAAGAAAACAAATATGGCGG
CGTGATGTTCTTGCTGCCCAAAGTGGTATCAACCATAGAAATAAACTACT
GATTGTACTTTTTCTCAAATTATCATACACAAATATAAGCGAATTGCCAC
CAGATTTAAAATGGAAGCGAATGTTTGGTTTGATTTACAGTATCATTCAA
CGCAACTTAGAAGACATGTCAGTAAAAGCACCCCTTTTAAACAGCATTAC
TTTTCCAGCACTTGAGCCTCAATCAGGAATTCCAAGACAAGCAATCTTAA
AGCTACCACACACACTTAACAAGGGGTCTCCATGGAAGTTTGAACAAGCT
GGTGATATTTCAAAATACCTTTGTCAATGGCTCTTGGTCTACACAACCCA
AAATCCTGGCTCAAGTGGAAAGAAATCTCTCTTCCAAAACAAGTCCCCTA
ATGTTTCGCAAACCAATACGGCAGTTATGGAAATAGACGGATCACCATGT
CGCGATATTTTCACAGTTCTCAACATTAGTAAAAATTACATCAAAGAACA
CATGTTAAACCTCTACACATTCGCTGTCCTCAAATCATGGCTTGAGTTTG
CTTTATCACAGGAAGATATGACTGATTGCTTAACAAGCACTTTACCAAAA
TTCCCAACAACTAAAGGAACGCCAAAAGGAGCATCATACTCAGATAGTCC
CTTATCAGCATTCGGCGCTAGTCAGTTTTATGACGTTGATTCTGAAAGCT
CGACCGAGTCCCCTTCAGTGTCATCCTCATTTGCTTCATCCCCAGTCTTT
TCCCAATTCGACGAATTAACCAACGAGCAATTTGACCGGCGCCGAACATT
CGATCAAATGTCTCTACGTTCAGCCACACCATCGTTCATAGCTACACCAC
GTAAAACAAGCCAAGCTTTCGATACTGTCTCTATTACTTCAGATATCTTT
TCAAATGCATCCAATTTGAAGAATGTAGCGGCAAAATATTGCTTGAGAAT
CATTTTACAATCAGAACGAGGCCCATTGAAAGATACTGACCGAGCAATGG
TAACTGCTAGTGTGGTTGAAGCGATCCAAATCCTGGACTTGCTTTGCAAA
GAAGAATGTACATTTACTCAAAAGGTGTTCAATGAGATCAAGAAGCTGTA
CCGTCGTTTAGAGGAGAAACCTGTAGCTGCTCGTCGAGTGTTGGTTGCTC
TTGTTCAGTTCTACATCAATCACCACGAGGAAATGATGATCCAGGTCGAA
GAAATCCTtgaaatctatttcaaaaacattcccaAACATTTATACACAAG
TCAAACGACTGGTTTTGAAATCTACGAGCtatgtttgaaaaataaagagt
tTTTTAAATTCCATCCTGAAGTGTTGGTTAAATATGTGCCCAATCTGTTT
CGTTTCGCTGCATGGTGGCCTTGTAATTTCATGGAAGAAATCTGTGAGAT
TCTATCCTTGATTTTAAACCAATCGACTGCTGCTGAGATTCTGCATTTGA
TCCTGGATCTACCTTGCCTGACAGCTTTGTTGCAACTAAGCCATGACGGT
TTTATTGAGGATCCAGTGAAGCTTGGTGAACGCTTGAAAACCGACTTACC
GCCTTATTCGAAAGCattattcaattttattttacgTGACAAACTCATGG
GAGTTGAAACCATTGATAAAATTCCAGAGCTTCACCGACTGTTAGGCGAA
TTCAGCCAAGATCCTTTGGTTAAGTACGTGACTGACATCCTACCACCATT
GCTGGTGACTTATATGTCAATCATTGAAGAATTGGATTCTGAAGAAGTGT
ACAAGAAGATCTTCCCAATCTTAATCGAGCGTACATACCAATTGTTCCCT
GTAGATGCCGAGCATGGTAAAATATTAGAGATCTTTGGCACTGAGATCAA
ATCAATTGCTGAATGGTACCCAGAAGTCATTTCCCTTCATAGTGGTGAGA
TCATCTCCTTTCTAACACTGTTCCGAAACAGTACATCTGTCCAGAAATCA
TCCAACATTGTCAATGCTGTGTTACACGCTATTGGAGATTCTGTTTCTGC
AATGGATAACGCTATTTTATCCAGTTTTTACGATACCATTGAAGAACTAG
CTTACGAAGCTTTGAATGGGATGaattctaataaagaatatataTTATCA
AGCATGGAGATCTTACAGAGTCTTTTAGCGACTATATCTAAGATAGCTGC
GCATGCTCAAGAACATATTCAACGGGCCGTTGTCTGTTTAAACAAAGTGG
TCAGCTTTGTTGCAGATTCACCGCTTTTCGTCAACCTTAAAAGTTATGCT
CAGGAACTGACAAACATGTTGAATAGACCACAAGTAGCACCGGCTATTCT
TTGTAAACGATCGGGTGTTGTCCCTTGGCACCTGACCGGCGACTCCTCTT
TGATGTTGAAAATTCATGTGTTGTCTCAATAGCTTAACTTTTCTTACAGG
AGATCAACCAAAGGTCAACAAATTCCGGAAAAATCATCTGCGGTGGAAAG
AAAACAAATATGGCGGCGTGATGTTCTTGCTGCCCAAAGTGGTATCAACC
ATAGAAATAAACTACTGATTGTACTTTTTCTCAAATTATCATACACAAAT
ATAAGCGAATTGCCACCAGATTTAAAATGGAAGCGAATGTTTGGTTTGAT
TTACAGTATCATTCAACGCAACTTAGAAGACATGTCAGTAAAAGCACCCC
TTTTAAACAGCATTACTTTTCCAGCACTTGAGCCTCAATCAGGAATTCCA
AGACAAGCAATCTTAAAGCTACCACACACACTTAACAAGGGGTCTCCATG
GAAGTTTGAACAAGCTGGTGATATTTCAAAATACCTTTGTCAATGGCTCT
TGGTCTACACAACCCAAAATCCTGGCTCAAGTGGAAAGAAATCTCTCTTC
CAAAACAAGTCCCCTAATGTTTCGCAAACCAATACGGCAGTTATGGAAAT
AGACGGATCACCATGTCGCGATATTTTCACAGTTCTCAACATTAGTAAAA
ATTACATCAAAGAACACATGTTAAACCTCTACACATTCGCTGTCCTCAAA
TCATGGCTTGAGTTTGCTTTATCACAGGAAGATATGACTGATTGCTTAAC
AAGCACTTTACCAAAATTCCCAACAACTAAAGGAACGCCAAAAGGAGCAT
CATACTCAGATAGTCCCTTATCAGCATTCGGCGCTAGTCAGTTTTATGAC
GTTGATTCTGAAAGCTCGACCGAGTCCCCTTCAGTGTCATCCTCATTTGC
TTCATCCCCAGTCTTTTCCCAATTCGACGAATTAACCAACGAGCAATTTG
ACCGGCGCCGAACATTCGATCAAATGTCTCTACGTTCAGCCACACCATCG
TTCATAGCTACACCACGTAAAACAAGCCAAGCTTTCGATACTGTCTCTAT
TACTTCAGATATCTTTTCAAATGCATCCAATTTGAAGAATGTAGCGGCAA
AATATTGCTTGAGAATCATTTTACAATCAGAACGAGGCCCATTGAAAGAT
ACTGACCGAGCAATGGTAACTGCTAGTGTGGTTGAAGCGATCCAAATCCT
GGACTTGCTTTGCAAAGAAGAATGTACATTTACTCAAAAGGTGTTCAATG
AGATCAAGAAGCTGTACCGTCGTTTAGAGGAGAAACCTGTAGCTGCTCGT
CGAGTGTTGGTTGCTCTTGTTCAGTTCTACATCAATCACCACGAGGAAAT
GATGATCCAGGTCGAAGAAATCCTtgaaatctatttcaaaaacattccca
AACATTTATACACAAGTCAAACGACTGGTTTTGAAATCTACGAGCtatgt
ttgaaaaataaagagttTTTTAAATTCCATCCTGAAGTGTTGGTTAAATA
TGTGCCCAATCTGTTTCGTTTCGCTGCATGGTGGCCTTGTAATTTCATGG
AAGAAATCTGTGAGATTCTATCCTTGATTTTAAACCAATCGACTGCTGCT
GAGATTCTGCATTTGATCCTGGATCTACCTTGCCTGACAGCTTTGTTGCA
ACTAAGCCATGACGGTTTTATTGAGGATCCAGTGAAGCTTGGTGAACGCT
TGAAAACCGACTTACCGCCTTATTCGAAAGCattattcaattttatttta
cgTGACAAACTCATGGGAGTTGAAACCATTGATAAAATTCCAGAGCTTCA
CCGACTGTTAGGCGAATTCAGCCAAGATCCTTTGGTTAAGTACGTGACTG
ACATCCTACCACCATTGCTGGTGACTTATATGTCAATCATTGAAGAATTG
GATTCTGAAGAAGTGTACAAGAAGATCTTCCCAATCTTAATCGAGCGTAC
ATACCAATTGTTCCCTGTAGATGCCGAGCATGGTAAAATATTAGAGATCT
TTGGCACTGAGATCAAATCAATTGCTGAATGGTACCCAGAAGTCATTTCC
CTTCATAGTGGTGAGATCATCTCCTTTCTAACACTGTTCCGAAACAGTAC
ATCTGTCCAGAAATCATCCAACATTGTCAATGCTGTGTTACACGCTATTG
GAGATTCTGTTTCTGCAATGGATAACGCTATTTTATCCAGTTTTTACGAT
ACCATTGAAGAACTAGCTTACGAAGCTTTGAATGGGATGaattctaataa
agaatatataTTATCAAGCATGGAGATCTTACAGAGTCTTTTAGCGACTA
TATCTAAGATAGCTGCGCATGCTCAAGAACATATTCAACGGGCCGTTGTC
TGTTTAAACAAAGTGGTCAGCTTTGTTGCAGATTCACCGCTTTTCGTCAA
CCTTAAAAGTTATGCTCAGGAACTGACAAACATGTTGAATAGACCACAAG
TAGCACCGGCTATTCTTTGTAAACGATCGGGTGTTGTCCCTTGGCACCTG
ACCGGCGACTCCTCTTTGATGTTGAAAATTCATGTGTTGTCTCAATAGCT
TAACTTTTCTTACAGGAGATCAACCAAAGGTCAACAAATTCCGGAAAAAT
CATCTGCGGTGGAAAGAAAACAAATATGGCGGCGTGATGTTCTTGCTGCC
CAAAGTGGTATCAACCATAGAAATAAACTACTGATTGTACTTTTTCTCAA
ATTATCATACACAAATATAAGCGAATTGCCACCAGATTTAAAATGGAAGC
GAATGTTTGGTTTGATTTACAGTATCATTCAACGCAACTTAGAAGACATG
TCAGTAAAAGCACCCCTTTTAAACAGCATTACTTTTCCAGCACTTGAGCC
TCAATCAGGAATTCCAAGACAAGCAATCTTAAAGCTACCACACACACTTA
ACAAGGGGTCTCCATGGAAGTTTGAACAAGCTGGTGATATTTCAAAATAC
CTTTGTCAATGGCTCTTGGTCTACACAACCCAAAATCCTGGCTCAAGTGG
AAAGAAATCTCTCTTCCAAAACAAGTCCCCTAATGTTTCGCAAACCAATA
CGGCAGTTATGGAAATAGACGGATCACCATGTCGCGATATTTTCACAGTT
CTCAACATTAGTAAAAATTACATCAAAGAACACATGTTAAACCTCTACAC
ATTCGCTGTCCTCAAATCATGGCTTGAGTTTGCTTTATCACAGGAAGATA
TGACTGATTGCTTAACAAGCACTTTACCAAAATTCCCAACAACTAAAGGA
ACGCCAAAAGGAGCATCATACTCAGATAGTCCCTTATCAGCATTCGGCGC
TAGTCAGTTTTATGACGTTGATTCTGAAAGCTCGACCGAGTCCCCTTCAG
TGTCATCCTCATTTGCTTCATCCCCAGTCTTTTCCCAATTCGACGAATTA
ACCAACGAGCAATTTGACCGGCGCCGAACATTCGATCAAATGTCTCTACG
TTCAGCCACACCATCGTTCATAGCTACACCACGTAAAACAAGCCAAGCTT
TCGATACTGTCTCTATTACTTCAGATATCTTTTCAAATGCATCCAATTTG
AAGAATGTAGCGGCAAAATATTGCTTGAGAATCATTTTACAATCAGAACG
AGGCCCATTGAAAGATACTGACCGAGCAATGGTAACTGCTAGTGTGGTTG
AAGCGATCCAAATCCTGGACTTGCTTTGCAAAGAAGAATGTACATTTACT
CAAAAGGTGTTCAATGAGATCAAGAAGCTGTACCGTCGTTTAGAGGAGAA
ACCTGTAGCTGCTCGTCGAGTGTTGGTTGCTCTTGTTCAGTTCTACATCA
ATCACCACGAGGAAATGATGATCCAGGTCGAAGAAATCCTtgaaatctat
ttcaaaaacattcccaAACATTTATACACAAGTCAAACGACTGGTTTTGA
AATCTACGAGCtatgtttgaaaaataaagagttTTTTAAATTCCATCCTG
AAGTGTTGGTTAAATATGTGCCCAATCTGTTTCGTTTCGCTGCATGGTGG
CCTTGTAATTTCATGGAAGAAATCTGTGAGATTCTATCCTTGATTTTAAA
CCAATCGACTGCTGCTGAGATTCTGCATTTGATCCTGGATCTACCTTGCC
TGACAGCTTTGTTGCAACTAAGCCATGACGGTTTTATTGAGGATCCAGTG
AAGCTTGGTGAACGCTTGAAAACCGACTTACCGCCTTATTCGAAAGCatt
attcaattttattttacgTGACAAACTCATGGGAGTTGAAACCATTGATA
AAATTCCAGAGCTTCACCGACTGTTAGGCGAATTCAGCCAAGATCCTTTG
GTTAAGTACGTGACTGACATCCTACCACCATTGCTGGTGACTTATATGTC
AATCATTGAAGAATTGGATTCTGAAGAAGTGTACAAGAAGATCTTCCCAA
TCTTAATCGAGCGTACATACCAATTGTTCCCTGTAGATGCCGAGCATGGT
AAAATATTAGAGATCTTTGGCACTGAGATCAAATCAATTGCTGAATGGTA
CCCAGAAGTCATTTCCCTTCATAGTGGTGAGATCATCTCCTTTCTAACAC
TGTTCCGAAACAGTACATCTGTCCAGAAATCATCCAACATTGTCAATGCT
GTGTTACACGCTATTGGAGATTCTGTTTCTGCAATGGATAACGCTATTTT
ATCCAGTTTTTACGATACCATTGAAGAACTAGCTTACGAAGCTTTGAATG
GGATGaattctaataaagaatatataTTATCAAGCATGGAGATCTTACAG
AGTCTTTTAGCGACTATATCTAAGATAGCTGCGCATGCTCAAGAACATAT
TCAACGGGCCGTTGTCTGTTTAAACAAAGTGGTCAGCTTTGTTGCAGATT
CACCGCTTTTCGTCAACCTTAAAAGTTATGCTCAGGAACTGACAAACATG
TTGAATAGACCACAAGTAGCACCGGCTATTCTTTGTAAACGATCGGGTGT
TGTCCCTTGGCACCTGACCGGCGACTCCTCTTTGATGTTGAAAATTCATG
TGTTGTCTCAATAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033959	XLOC_033959	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053812-exon-scaffold_234-1491911889:438946..439031	TCONS_00053812-exon-scaffold_234-1491911889:438946..439031	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1510915933:438946..439031	TCONS_00053812-exon-scaffold_234-1510915933:438946..439031	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1575043694:438946..439031	TCONS_00053812-exon-scaffold_234-1575043694:438946..439031	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1491911889:439247..439649	TCONS_00053812-exon-scaffold_234-1491911889:439247..439649	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1510915933:439247..439649	TCONS_00053812-exon-scaffold_234-1510915933:439247..439649	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1575043694:439247..439649	TCONS_00053812-exon-scaffold_234-1575043694:439247..439649	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1491911889:443040..443708	TCONS_00053812-exon-scaffold_234-1491911889:443040..443708	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1510915933:443040..443708	TCONS_00053812-exon-scaffold_234-1510915933:443040..443708	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1575043694:443040..443708	TCONS_00053812-exon-scaffold_234-1575043694:443040..443708	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1491911889:444180..445697	TCONS_00053812-exon-scaffold_234-1491911889:444180..445697	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1510915933:444180..445697	TCONS_00053812-exon-scaffold_234-1510915933:444180..445697	Clytia hemisphaerica	exon
TCONS_00053812-exon-scaffold_234-1575043694:444180..445697	TCONS_00053812-exon-scaffold_234-1575043694:444180..445697	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053812-protein	TCONS_00053812-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_234	supercontig	scaffold_234:438946..445697 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.71014	2.99326	0	1.73741	10.7943	8.54947	7.27516	4.4841	5.77233	7.93608	5.70619	6.61875	5.34647	4.81201	4.63518	5.04346	3.79513	3.33113	4.29869	5.38011	4.09665	2.77367	4.64184	5.84853	8.25143	7.28507	1.99124	2.42707	2.41172	3.38561

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR028222	AP5Z1
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0044599	AP-5 adaptor complex

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0044599	AP-5 adaptor complex
molecular_function	GO:0005488	binding

Blast

[Close]

BLAST of TCONS_00053812 vs. Swiss-Prot (Human)
Match: AP5Z1 (AP-5 complex subunit zeta-1 OS=Homo sapiens GN=AP5Z1 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 1.414e-42
Identity = 135/543 (24.86%), Postives = 256/543 (47.15%), Query Frame = 1

Query:  913 PSFIATPRKTSQAFDTVSITSDIFSNA------SNLKNVAAKYCLRIILQSERGPLKDTDRAMVTASVVEAIQILDLLCKEECTFTQKVFNEIKKLYRRLEEKPXXXXXXXXXXXQFYINHHEEMMIQVEEILEIYFKNIPKHLYTSQTTGFEIYELCLKNKEFFKFHPEVLVKYVPNLFRFAAWWPCNFMEEICEILSLILNQSTAAEILHLILDLPCLTALLQL---SHDGFIEDP-----VKLGERLKTDLPPYSKALFNFILRDKLMGVETIDKIPELHRLLGEFSQDPLVKYVTDILPPLLVTYMSIIEELDSEEVYKKIFPILIERTYQLFPVDAEHGKILEIFGTEIKSIAEWYPEVISLHSGEIISFLTLFRNSTSVQKSSNIVNAVLHAIGDSVSAMDNAI-----LSSFYDTIEELAYEALNGMNSNKEYILSSMEILQSLLATISKIAAHAQEHIQRAVVCLNKVVSFVADSPLFVN---------LKSYAQELTNMLNRPQVAPAILCKRSGVVP--WHLTGDSSLMLKIH 2451
            P  + T  ++ Q   T+S+ S   S          L+ VA +YC R+I QS R  L+  D  +  A +VEA+ +LD+LC+++ +F  +  + +K L+ R+   P + R +L     F+++H E   +  E + +  F  IP   + S    FE  + C  N   F  H   L    PNLF+F AW       E   +L  +++  TA E+LH +LDLPCLTA+L L   S     E P     ++    L+    P  + LF ++LR K  G    +++  LH+LL   +    V      +P LL  + S + ++    +  ++  +L+ R+  L+P       +  +  ++  ++    P ++   + +++ FL    +   +   +++V +V+ AIG+ +S   +       ++ F++ +E L +E +     +        +++  L+ T++K+A+ +Q+ I RA + L+K+ + +A SP   +         +++ A EL  +L  P VA  +L   + V    +H   +++L L + 
Sbjct:  258 PGTLDTDDRSEQEGSTLSVISATSSAGRLLPPRERLREVAFEYCQRLIEQSNRRALRKGDSDLQKACLVEAVLVLDVLCRQDPSFLYRSLSCLKALHGRVRGDPASVRVLLPLA-HFFLSHGEAAAVDSEAVYQHLFTRIPVEQFHSPMLAFEFIQFCRDNLHLFSGHLSTLRLSFPNLFKFLAWNSPPLTSEFVALLPALVDAGTALEMLHALLDLPCLTAVLDLQLRSAPAASERPLWDTSLRAPSCLEAFRDPQFQGLFQYLLRPKASGA--TERLAPLHQLLQPMAGCARVAQCAQAVPTLLQAFFSAVTQVADGSLINQLALLLLGRSDSLYPAPGYAAGVHSVLSSQFLALCTLKPSLVVELARDLLEFLG---SVNGLCSRASLVTSVVWAIGEYLSVTYDRRCTVEQINKFFEALEALLFE-VTQCRPSAALPRCPPQVVTVLMTTLTKLASRSQDLIPRASLLLSKMRT-LAHSPATSSTHSEEGAEAIRTRATELLTLLKMPSVAQFVLTPSTEVCSPRYHRDANTALPLALR 792

The following BLAST results are available for this feature:

BLAST of TCONS_00053812 vs. Swiss-Prot (Human)

BLAST of TCONS_00053812 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AP5Z1	1.414e-42	24.86	AP-5 complex subunit zeta-1 OS=Homo sapiens GN=AP5...	[more]

You are here

TCONS_00053812 (transcript) - C. hemisphaerica