TCONS_00053815 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053815
Unique NameTCONS_00053815
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1435

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053815 ID=TCONS_00053815|Name=TCONS_00053815|organism=Clytia hemisphaerica|type=transcript|length=1435bp
GAGAAGACGTTGTTTGAGAGTAGTTAGAAACATAAGGTTTTTTGTATGAT
AGAATGAAGATCTTAATTTTTATGCTGTTTGGATTGGTTGCCGTTCGATC
GGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTCGTTCAACTGACG
AAGAAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATCGAACCATTC
GATCAACCCATCCCTGGAGACAAAgaagaaattgaagaaaatgagGACGA
AGTTTTATACGAACTTGAAGATGGTACAAGAATCACTGAAGCTGAATTTC
ACAAACGATTTGAAACTGTCCCTGTTACTGAAGATGGTGAAATAAAGGAA
GAGGAGTATGAGCACGCAGAACACGAAGTACATCACGAAGAACACGAGGA
GCACGAAAAGAAACTTGATGCTCACCACAAGGAGAAAAACGCTGCTAAGc
CACCAGTTGAAGAGGAAAATGACCATGAAGACAAAGAAGGTCCAGTAGAA
GAACCAGTCAACCCACCATCTGAAGTCGTCACACCTGAAGAGCAAGAACT
TTTGAATAAACAAGAACAAGAAGAAGAGCACCACGAGGAAGAGCACCAAG
AAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTCCCTCCTCCATGG
GAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGTTTATAAGAAATT
TACTGAAATGGAACACCACACTGAGGAAATGGCTGATGGTCACTTTATTG
AAACTGAAGGAGAAGATGAAGGAGTTGAACTACCACAGGACGGTGAAGGT
TTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGAAGGAGAGCACCA
TGAAGACGAAGATCGATTCTTTGAACAAGAAGATTACgaaaatgaaatga
agaaaCAACAACGAAACGAGGATGTCATCGAGCcagaggaaaatgaaaat
gaagaatttgaagaagaagatgaagaagagcTTGAACATAAGGAAATCTT
CACTACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGGTGCCCGAAA
AGGAGCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAACCTAAGGAA
GAAGAACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAAACACGTACC
CGAGGAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAGAGGTTACAA
AAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAAAAAGAACGC
CTTTAGGAGATTTGAAAATTATTACTTCACGTATATCCCAATTTATTTTA
TAGTTGATTTGATACCTATATTTTCAGGATAATAATTATCCCTTTAAAAT
TTCTAACAATTTCATTAGGTTGTTTATATtcattatataaaaagaaaccc
ATCCATTTATATCAAAGTTCATTTCAAGATCTGAT
Run BLAST on NCBI

protein sequence of TCONS_00053815-protein

>TCONS_00053815-protein ID=TCONS_00053815-protein|Name=TCONS_00053815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MKILIFMLFGLVAVRSVPLEVDGHLRVIRSTDEEGELIKDPYYTGIEPFD
QPIPGDKEEIEENEDEVLYELEDGTRITEAEFHKRFETVPVTEDGEIKEE
EYEHAEHEVHHEEHEEHEKKLDAHHKEKNAAKPPVEEENDHEDKEGPVEE
PVNPPSEVVTPEEQELLNKQEQEEEHHEEEHQEVLRTEKLAEGQVPPPWE
LERMSQEERDAVYKKFTEMEHHTEEMADGHFIETEGEDEGVELPQDGEGF
EEAMLENEEKEEGEHHEDEDRFFEQEDYENEMKKQQRNEDVIEPEENENE
EFEEEDEEELEHKEIFTTPTPVKVPEEKEVPEKEHVPEEKHEEHEEPKEE
EHVPEEKHVPEEKHVPEEKHVAEKNEMEGEVTKEIEEPRRNPEEQEKERL
Run BLAST on NCBI

transcript from alignment at scaffold_234:449671..454351+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053815 ID=TCONS_00053815|Name=TCONS_00053815|organism=Clytia hemisphaerica|type=transcript|length=4681bp|location=Sequence derived from alignment at scaffold_234:449671..454351+ (Clytia hemisphaerica)
GAGAAGACGTTGTTTGAGAGTAGTTAGAAACATAAGGTTTTTTGTATGAT
AGAATGAAGGTCTTAATTTTTATGCTGTTNGcccttttttgaaatctgaa
actttCTATTGTCCGcatgtaaaaataatgtttGTTTTAACCTCTGAGTG
CTTTGTCTCGTGGAACCTTTTTTTGAAATCTCATCGTTTTTGACGTTTGT
CAGTCAagagaaaatatctttcttaGTTTATGAGAAGACGTTGTTTGAGT
AGTTAGAAAACGTAAGGTTTTTGTAAGATAGAATGAAGATCTTAATTTTT
ATGCTGTTTGGATTGGTTGCCGTTCGATCGGTTCCCCTAGGTAAGTCTTA
CGAAAATCTGGTAAACAAGTTTATAAAAAGTCCAGCGGATGTTAACGTCC
CCTGAAAAACTGGCGCTCCCTTTTTCGGAAAGTAGAGAATTCGGGTAGTA
CTTTTTGGGAAAAGGTAAAATTCAAAATGTGTggagatttttcattttaa
ctCAATTTGAATTGGGGTTCATGGCATTGTTAACTAAAAAGGAACATAAA
CTTTTTGGAGTTAAgtagacattcgagttaaagagactccgctATATTAT
CATTTTAGAGGTTGATGGCCATTTGCGAGTGATTCGTTCAACTGACGAAG
AAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATCGAACCATTCGAT
CAACCCATCCCTGGAGACAAAGTAAGACAATATTGTTAATAGACCCCTAT
GCcaaagaaaaattgttctaaaaataagaaattatatCTTGAAAATTAAT
GTCCATCGAAAATTGTACAATTTAAATATATAGACAGGGTTGTTACTAAT
AACCTTATACATATTTaacacccctgcctctgtgacccagtgggatccac
cccactggccaccccagtaaatttttttaccaaaaatggctcatttttca
gccccactggacaaATCACTCACCCCACTTGAATTTTGTAGTAAAAAATC
ACcccattgaaaatgataaaaagtttacaCATACCCCACTCGAAATGCCC
TTATTTTAACGTACCCCTTAACGTagaacttttctttcaaaaaatcaccc
cACTAGAATTTTCTCCTTCCCCTTTATTAAAggtaaaatatccaaaaaaa
acaaaaaaatctgtatTTAACCCAACTTCTATGGTCATTGTCATGGTCAT
TTTAAAACGTATAAAATGCCAAACGAGAggggttgaaaatcaaaaatttc
tgtCAGCACAAACCACAGTTGAACTTGTacctttctttctttaaagctaG
GTTATAGCCTGAAAGATTTTCGAGAGGCTTTCTCACTTGCGTAGATACTG
AAAGAAAGACCTCTACTTAAATCATGTCGACTAAACATTACTAGGTTCCA
GAgtttataaaatttgatattaCTGCTCCTCTATAGCCCCCTTCCCCCAG
ACTTCATTACATTTCTTGCTACAGTGTAAGAGTAGATCCACCTGATCAAG
ATGATATTTCTAGTGATATTTAGTAGCATGTAAGAAGCATATTTGACTAG
CACTAAACCAAAAGATGGCCAGTATCTTCCATCGTTAAAACACAATAAAA
TTAAGCGGTCTACAATCTAACACACagactaaccaaaatttagctcatgc
aaaaaattctttctcaccCAAGTGAATGTCAAGGAAATTTTCGCCACCCC
actcaatatttgaaagaatatttttcactcCAGTGAATTTCAGGTTTTTT
GATTCTCGCCCCACTGGGTAATCAACACCCACTggggcacagagacaggg
gtgttatttaCAATCTCAATTCACAAACCTAATTTACCCGCTATTTTATC
TTCCATTTTTGCaggaagaaattgaagaaaatgagGACGAAGTTTTATAC
GAACTTGAAGATGGTACAAGAATCACTGAAGCTGAATTTCACAAACGATT
TGAAACTGTCCCTGTTACTGAAGATGGTGAAATAAAGGAAGAGGAGTATG
AGCACGCAGAACACGAAGTACATCACGAAGAACACGAGGAGCACGAAAAG
AAACTTGATGCTCACCACAAGGAGAAAAACGCTGCTAAGGTtaatattat
aatatataaaacttaaaaaaaattacttaatCCGAGAAACTGTGCGTCAG
TGTGTCGCAAGCTGGCAGACAGTATGAACTACAGTGTAAGATGGGTCTAA
CAAGATGACTCCTAGATTGCTCAATACAGAACCGGACATTCTCTGTAAGG
AGAAGCCTGTCATCTTGTTTTCTATGCGGGAATCAATAtagaagataatt
tttttgtttacagcCACCAGTTGAAGAGGAAAATGACCATGAAGACAAAG
AAGGTCCAGTAGAAGAACCAGTCAACCCACCATCTGAAGTCGTCACACCT
GAAGAGCAAGAACTTTTGAATAAACAAGAACAAGgtattttttcaaggtt
ttcaatcTTTTAGTACTAggtggaggggggggggggggNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
gtgggggggggggggggggctttttctGTTCGAATGGCAAAACTTGTGTT
AATAATTCCTTAAAATaaagcttttgacttgaaatatttgtaaattgagt
gacgtcatcagaaaaaatcttttttgtcaaaagtagTATTGTATGACAAG
GACAAGGATCACGTGTGCCAAATTcaaactagatcaaaagttaagggcgG
TACAAGAACCGCCCCCCAGATCTAAACCACCCATAagagcctagtatgaa
tagagGCAAAGGTTTTCATATCCGGCTTTATCTTATGGAGCATGAAAATA
AGATTTGGTTTCGGTTCCTTCCCAACCTTGTGCTCCGTATCTGGTACTTT
CCCTTTATACTATGGCTGCTTCTATTACTTTAAACTGTCTTTCTTTTATA
GAAGAAGAGCACCACGAGGAAGAGCACCAAGAAGTGTTGCGAACTGAGAA
ATTAGCTGAAGGTCAAGTCCCTCCTCCATGGGAGTTAGAGAGAATGAGTC
AAGAAGAACGAGACGCTGTTTATAAGAAATTTACTGAAATGGAACACCAC
ACTGAGGAAATGGCTGATGGTCACTTTATTGAAACTGAAGGTATATATAG
GTTGATAAAGACCAATAAAATTTGTGTTTGACCAACAGGAAGTCAATTTG
TCgattaaacttttaaaatttggactaaaattttggctgaaattttgcgg
AAATAGCCTCTCTAAGGatggcaaaaacgtcaaacatggacaaaactttc
gaaattcagtctctctgaGGCGTCAATTTTGGCTCGGAGATCTATCATCT
TGCAAACCTACCCCCGGGGTGTATTCTCACTGGCAAGGAATTTGACAGTC
CAGTGTTTTTCTATCtgcagacacatgtttcatccCACTCGTCCATCTGA
CTCGGGTGGGTGAGCATAGACTATTGTTCTCACCATTGCTAAAGACACTA
GCGTTAAGCTTTGTATAATCGGTTGCGATAAGTGGAAAAAATGAGGTCGC
TCCTCAATAGAGTTTATGAAAGTGATCGATGTAAAAGGTTTTCTAATCAC
ACGGACACGCATggggaacgcaaatttgttcgagttaaggaaattttgag
ttatggagattggTTGATATAGCTCATTGTTctgaagggaccagaaaact
tttgcgagttaaggagatatttGGGTTaaatagaagttcgagttatgAAA
ACTTGACTGTATTCCGATTATTCTTTTCAGGAGAAGATGAAGGAGTTGAA
CTACCACAGGACGGTGAAGGTTTTGAAGAAGCCATGCTCGAAAATGAGGA
GAAAGAAGAAGGAGAGCACCATGAAGACGAAGATCGATTCTTTGAACAAG
AAGATTACgaaaatgaaatgaagaaaCAGTAAGAAAAATTGTTCATACGT
TCTCCATAATTTCCCTTATAAGCGCACGAAAGAGGGTTGGGTTTGAGGAC
AACATCAagtttatgttaattattccATCCGCAATTCCGTTGCTACTCTA
CTGATACAGACAAGTTAGACACCTTGGTAACTTAATATCGAACTTTTTCG
TCAGGTTAATAGACGTTATGCTTTATTATGATTTTCGATCCTTATATTTT
CAGACAACGAAACGAGGATGTCATCGAGCcagaggaaaatgaaaatgaag
aatttgaagaagaagatgaagaagagcTTGAACATAAGGAAATCTTCACT
ACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGGTGCCCGAAAAGGA
GCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAACCTAAGGAAGAAG
AACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAAACACGTACCCGAG
GAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAGAGGTTACAAAAGA
GATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAAAAAGAACGCCTTT
AGGAGATTTGAAAATTATTACTTCACGTATATCCCAATTTATTTTATAGT
TGATTTGATACCTATATTTTCAGGATAATAATTATCCCTTTAAAATTTCT
AACAATTTCATTAGGTTGTTTATATtcattatataaaaagaaacccATCC
ATTTATATCAAAGTTCATTTCAAGATCTGAT

Coding sequence (CDS) from alignment at scaffold_234:449671..454351+

>TCONS_00053815 ID=TCONS_00053815|Name=TCONS_00053815|organism=Clytia hemisphaerica|type=CDS|length=9624bp|location=Sequence derived from alignment at scaffold_234:449671..454351+ (Clytia hemisphaerica)
ATGAAGATCTTAATTTTTATGCTGTTTGGATTGGTTGCCGTTCGATCGGT
TCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTCGTTCAACTGACGAAG
AAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATCGAACCATTCGAT
CAACCCATCCCTGGAGACAAAgaagaaattgaagaaaatgagGACGAAGT
TTTATACGAACTTGAAGATGGTACAAGAATCACTGAAGCTGAATTTCACA
AACGATTTGAAACTGTCCCTGTTACTGAAGATGGTGAAATAAAGGAAGAG
GAGTATGAGCACGCAGAACACGAAGTACATCACGAAGAACACGAGGAGCA
CGAAAAGAAACTTGATGCTCACCACAAGGAGAAAAACGCTGCTAAGcCAC
CAGTTGAAGAGGAAAATGACCATGAAGACAAAGAAGGTCCAGTAGAAGAA
CCAGTCAACCCACCATCTGAAGTCGTCACACCTGAAGAGCAAGAACTTTT
GAATAAACAAGAACAAGAAGAAGAGCACCACGAGGAAGAGCACCAAGAAG
TGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTCCCTCCTCCATGGGAG
TTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGTTTATAAGAAATTTAC
TGAAATGGAACACCACACTGAGGAAATGGCTGATGGTCACTTTATTGAAA
CTGAAGGAGAAGATGAAGGAGTTGAACTACCACAGGACGGTGAAGGTTTT
GAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGAAGGAGAGCACCATGA
AGACGAAGATCGATTCTTTGAACAAGAAGATTACgaaaatgaaatgaaga
aaCAACAACGAAACGAGGATGTCATCGAGCcagaggaaaatgaaaatgaa
gaatttgaagaagaagatgaagaagagcTTGAACATAAGGAAATCTTCAC
TACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGGTGCCCGAAAAGG
AGCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAACCTAAGGAAGAA
GAACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAAACACGTACCCGA
GGAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAGAGGTTACAAAAG
AGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAAAAAGAACGCCTT
TAGATGAAGATCTTAATTTTTATGCTGTTTGGATTGGTTGCCGTTCGATC
GGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTCGTTCAACTGACG
AAGAAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATCGAACCATTC
GATCAACCCATCCCTGGAGACAAAgaagaaattgaagaaaatgagGACGA
AGTTTTATACGAACTTGAAGATGGTACAAGAATCACTGAAGCTGAATTTC
ACAAACGATTTGAAACTGTCCCTGTTACTGAAGATGGTGAAATAAAGGAA
GAGGAGTATGAGCACGCAGAACACGAAGTACATCACGAAGAACACGAGGA
GCACGAAAAGAAACTTGATGCTCACCACAAGGAGAAAAACGCTGCTAAGc
CACCAGTTGAAGAGGAAAATGACCATGAAGACAAAGAAGGTCCAGTAGAA
GAACCAGTCAACCCACCATCTGAAGTCGTCACACCTGAAGAGCAAGAACT
TTTGAATAAACAAGAACAAGAAGAAGAGCACCACGAGGAAGAGCACCAAG
AAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTCCCTCCTCCATGG
GAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGTTTATAAGAAATT
TACTGAAATGGAACACCACACTGAGGAAATGGCTGATGGTCACTTTATTG
AAACTGAAGGAGAAGATGAAGGAGTTGAACTACCACAGGACGGTGAAGGT
TTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGAAGGAGAGCACCA
TGAAGACGAAGATCGATTCTTTGAACAAGAAGATTACgaaaatgaaatga
agaaaCAACAACGAAACGAGGATGTCATCGAGCcagaggaaaatgaaaat
gaagaatttgaagaagaagatgaagaagagcTTGAACATAAGGAAATCTT
CACTACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGGTGCCCGAAA
AGGAGCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAACCTAAGGAA
GAAGAACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAAACACGTACC
CGAGGAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAGAGGTTACAA
AAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAAAAAGAACGC
CTTTAGATGAAGATCTTAATTTTTATGCTGTTTGGATTGGTTGCCGTTCG
ATCGGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTCGTTCAACTG
ACGAAGAAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATCGAACCA
TTCGATCAACCCATCCCTGGAGACAAAgaagaaattgaagaaaatgagGA
CGAAGTTTTATACGAACTTGAAGATGGTACAAGAATCACTGAAGCTGAAT
TTCACAAACGATTTGAAACTGTCCCTGTTACTGAAGATGGTGAAATAAAG
GAAGAGGAGTATGAGCACGCAGAACACGAAGTACATCACGAAGAACACGA
GGAGCACGAAAAGAAACTTGATGCTCACCACAAGGAGAAAAACGCTGCTA
AGcCACCAGTTGAAGAGGAAAATGACCATGAAGACAAAGAAGGTCCAGTA
GAAGAACCAGTCAACCCACCATCTGAAGTCGTCACACCTGAAGAGCAAGA
ACTTTTGAATAAACAAGAACAAGAAGAAGAGCACCACGAGGAAGAGCACC
AAGAAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTCCCTCCTCCA
TGGGAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGTTTATAAGAA
ATTTACTGAAATGGAACACCACACTGAGGAAATGGCTGATGGTCACTTTA
TTGAAACTGAAGGAGAAGATGAAGGAGTTGAACTACCACAGGACGGTGAA
GGTTTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGAAGGAGAGCA
CCATGAAGACGAAGATCGATTCTTTGAACAAGAAGATTACgaaaatgaaa
tgaagaaaCAACAACGAAACGAGGATGTCATCGAGCcagaggaaaatgaa
aatgaagaatttgaagaagaagatgaagaagagcTTGAACATAAGGAAAT
CTTCACTACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGGTGCCCG
AAAAGGAGCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAACCTAAG
GAAGAAGAACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAAACACGT
ACCCGAGGAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAGAGGTTA
CAAAAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAAAAAGAA
CGCCTTTAGATGAAGATCTTAATTTTTATGCTGTTTGGATTGGTTGCCGT
TCGATCGGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTCGTTCAA
CTGACGAAGAAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATCGAA
CCATTCGATCAACCCATCCCTGGAGACAAAgaagaaattgaagaaaatga
gGACGAAGTTTTATACGAACTTGAAGATGGTACAAGAATCACTGAAGCTG
AATTTCACAAACGATTTGAAACTGTCCCTGTTACTGAAGATGGTGAAATA
AAGGAAGAGGAGTATGAGCACGCAGAACACGAAGTACATCACGAAGAACA
CGAGGAGCACGAAAAGAAACTTGATGCTCACCACAAGGAGAAAAACGCTG
CTAAGcCACCAGTTGAAGAGGAAAATGACCATGAAGACAAAGAAGGTCCA
GTAGAAGAACCAGTCAACCCACCATCTGAAGTCGTCACACCTGAAGAGCA
AGAACTTTTGAATAAACAAGAACAAGAAGAAGAGCACCACGAGGAAGAGC
ACCAAGAAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTCCCTCCT
CCATGGGAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGTTTATAA
GAAATTTACTGAAATGGAACACCACACTGAGGAAATGGCTGATGGTCACT
TTATTGAAACTGAAGGAGAAGATGAAGGAGTTGAACTACCACAGGACGGT
GAAGGTTTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGAAGGAGA
GCACCATGAAGACGAAGATCGATTCTTTGAACAAGAAGATTACgaaaatg
aaatgaagaaaCAACAACGAAACGAGGATGTCATCGAGCcagaggaaaat
gaaaatgaagaatttgaagaagaagatgaagaagagcTTGAACATAAGGA
AATCTTCACTACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGGTGC
CCGAAAAGGAGCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAACCT
AAGGAAGAAGAACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAAACA
CGTACCCGAGGAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAGAGG
TTACAAAAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAAAAA
GAACGCCTTTAGATGAAGATCTTAATTTTTATGCTGTTTGGATTGGTTGC
CGTTCGATCGGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTCGTT
CAACTGACGAAGAAGGGGAGTTAATCAAAGACCCTTATTACACTGGCATC
GAACCATTCGATCAACCCATCCCTGGAGACAAAgaagaaattgaagaaaa
tgagGACGAAGTTTTATACGAACTTGAAGATGGTACAAGAATCACTGAAG
CTGAATTTCACAAACGATTTGAAACTGTCCCTGTTACTGAAGATGGTGAA
ATAAAGGAAGAGGAGTATGAGCACGCAGAACACGAAGTACATCACGAAGA
ACACGAGGAGCACGAAAAGAAACTTGATGCTCACCACAAGGAGAAAAACG
CTGCTAAGcCACCAGTTGAAGAGGAAAATGACCATGAAGACAAAGAAGGT
CCAGTAGAAGAACCAGTCAACCCACCATCTGAAGTCGTCACACCTGAAGA
GCAAGAACTTTTGAATAAACAAGAACAAGAAGAAGAGCACCACGAGGAAG
AGCACCAAGAAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTCCCT
CCTCCATGGGAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGTTTA
TAAGAAATTTACTGAAATGGAACACCACACTGAGGAAATGGCTGATGGTC
ACTTTATTGAAACTGAAGGAGAAGATGAAGGAGTTGAACTACCACAGGAC
GGTGAAGGTTTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGAAGG
AGAGCACCATGAAGACGAAGATCGATTCTTTGAACAAGAAGATTACgaaa
atgaaatgaagaaaCAACAACGAAACGAGGATGTCATCGAGCcagaggaa
aatgaaaatgaagaatttgaagaagaagatgaagaagagcTTGAACATAA
GGAAATCTTCACTACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAGAGG
TGCCCGAAAAGGAGCACGTGCCTGAAGAGAAACATGAGGAACACGAGGAA
CCTAAGGAAGAAGAACATGTGCCCGAAGAGAAACACGTACCCGAGGAGAA
ACACGTACCCGAGGAGAAACATGTGGCCGAGAAGAATGAGATGGAGGGAG
AGGTTACAAAAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAAGAA
AAAGAACGCCTTTAGATGAAGATCTTAATTTTTATGCTGTTTGGATTGGT
TGCCGTTCGATCGGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGATTC
GTTCAACTGACGAAGAAGGGGAGTTAATCAAAGACCCTTATTACACTGGC
ATCGAACCATTCGATCAACCCATCCCTGGAGACAAAgaagaaattgaaga
aaatgagGACGAAGTTTTATACGAACTTGAAGATGGTACAAGAATCACTG
AAGCTGAATTTCACAAACGATTTGAAACTGTCCCTGTTACTGAAGATGGT
GAAATAAAGGAAGAGGAGTATGAGCACGCAGAACACGAAGTACATCACGA
AGAACACGAGGAGCACGAAAAGAAACTTGATGCTCACCACAAGGAGAAAA
ACGCTGCTAAGcCACCAGTTGAAGAGGAAAATGACCATGAAGACAAAGAA
GGTCCAGTAGAAGAACCAGTCAACCCACCATCTGAAGTCGTCACACCTGA
AGAGCAAGAACTTTTGAATAAACAAGAACAAGAAGAAGAGCACCACGAGG
AAGAGCACCAAGAAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAAGTC
CCTCCTCCATGGGAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGCTGT
TTATAAGAAATTTACTGAAATGGAACACCACACTGAGGAAATGGCTGATG
GTCACTTTATTGAAACTGAAGGAGAAGATGAAGGAGTTGAACTACCACAG
GACGGTGAAGGTTTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGAAGA
AGGAGAGCACCATGAAGACGAAGATCGATTCTTTGAACAAGAAGATTACg
aaaatgaaatgaagaaaCAACAACGAAACGAGGATGTCATCGAGCcagag
gaaaatgaaaatgaagaatttgaagaagaagatgaagaagagcTTGAACA
TAAGGAAATCTTCACTACTCCAACACCTGTTAAGGTGCCCGAAGAGAAAG
AGGTGCCCGAAAAGGAGCACGTGCCTGAAGAGAAACATGAGGAACACGAG
GAACCTAAGGAAGAAGAACATGTGCCCGAAGAGAAACACGTACCCGAGGA
GAAACACGTACCCGAGGAGAAACATGTGGCCGAGAAGAATGAGATGGAGG
GAGAGGTTACAAAAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAGCAA
GAAAAAGAACGCCTTTAGATGAAGATCTTAATTTTTATGCTGTTTGGATT
GGTTGCCGTTCGATCGGTTCCCCTAGAGGTTGATGGCCATTTGCGAGTGA
TTCGTTCAACTGACGAAGAAGGGGAGTTAATCAAAGACCCTTATTACACT
GGCATCGAACCATTCGATCAACCCATCCCTGGAGACAAAgaagaaattga
agaaaatgagGACGAAGTTTTATACGAACTTGAAGATGGTACAAGAATCA
CTGAAGCTGAATTTCACAAACGATTTGAAACTGTCCCTGTTACTGAAGAT
GGTGAAATAAAGGAAGAGGAGTATGAGCACGCAGAACACGAAGTACATCA
CGAAGAACACGAGGAGCACGAAAAGAAACTTGATGCTCACCACAAGGAGA
AAAACGCTGCTAAGcCACCAGTTGAAGAGGAAAATGACCATGAAGACAAA
GAAGGTCCAGTAGAAGAACCAGTCAACCCACCATCTGAAGTCGTCACACC
TGAAGAGCAAGAACTTTTGAATAAACAAGAACAAGAAGAAGAGCACCACG
AGGAAGAGCACCAAGAAGTGTTGCGAACTGAGAAATTAGCTGAAGGTCAA
GTCCCTCCTCCATGGGAGTTAGAGAGAATGAGTCAAGAAGAACGAGACGC
TGTTTATAAGAAATTTACTGAAATGGAACACCACACTGAGGAAATGGCTG
ATGGTCACTTTATTGAAACTGAAGGAGAAGATGAAGGAGTTGAACTACCA
CAGGACGGTGAAGGTTTTGAAGAAGCCATGCTCGAAAATGAGGAGAAAGA
AGAAGGAGAGCACCATGAAGACGAAGATCGATTCTTTGAACAAGAAGATT
ACgaaaatgaaatgaagaaaCAACAACGAAACGAGGATGTCATCGAGCca
gaggaaaatgaaaatgaagaatttgaagaagaagatgaagaagagcTTGA
ACATAAGGAAATCTTCACTACTCCAACACCTGTTAAGGTGCCCGAAGAGA
AAGAGGTGCCCGAAAAGGAGCACGTGCCTGAAGAGAAACATGAGGAACAC
GAGGAACCTAAGGAAGAAGAACATGTGCCCGAAGAGAAACACGTACCCGA
GGAGAAACACGTACCCGAGGAGAAACATGTGGCCGAGAAGAATGAGATGG
AGGGAGAGGTTACAAAAGAGATTGAAGAGCCAAGAAGAAATCCCGAGGAG
CAAGAAAAAGAACGCCTTTAGATGAAGATCTTAATTTTTATGCTGTTTGG
ATTGGTTGCCGTTCGATCGGTTCCCCTAGAGGTTGATGGCCATTTGCGAG
TGATTCGTTCAACTGACGAAGAAGGGGAGTTAATCAAAGACCCTTATTAC
ACTGGCATCGAACCATTCGATCAACCCATCCCTGGAGACAAAgaagaaat
tgaagaaaatgagGACGAAGTTTTATACGAACTTGAAGATGGTACAAGAA
TCACTGAAGCTGAATTTCACAAACGATTTGAAACTGTCCCTGTTACTGAA
GATGGTGAAATAAAGGAAGAGGAGTATGAGCACGCAGAACACGAAGTACA
TCACGAAGAACACGAGGAGCACGAAAAGAAACTTGATGCTCACCACAAGG
AGAAAAACGCTGCTAAGcCACCAGTTGAAGAGGAAAATGACCATGAAGAC
AAAGAAGGTCCAGTAGAAGAACCAGTCAACCCACCATCTGAAGTCGTCAC
ACCTGAAGAGCAAGAACTTTTGAATAAACAAGAACAAGAAGAAGAGCACC
ACGAGGAAGAGCACCAAGAAGTGTTGCGAACTGAGAAATTAGCTGAAGGT
CAAGTCCCTCCTCCATGGGAGTTAGAGAGAATGAGTCAAGAAGAACGAGA
CGCTGTTTATAAGAAATTTACTGAAATGGAACACCACACTGAGGAAATGG
CTGATGGTCACTTTATTGAAACTGAAGGAGAAGATGAAGGAGTTGAACTA
CCACAGGACGGTGAAGGTTTTGAAGAAGCCATGCTCGAAAATGAGGAGAA
AGAAGAAGGAGAGCACCATGAAGACGAAGATCGATTCTTTGAACAAGAAG
ATTACgaaaatgaaatgaagaaaCAACAACGAAACGAGGATGTCATCGAG
CcagaggaaaatgaaaatgaagaatttgaagaagaagatgaagaagagcT
TGAACATAAGGAAATCTTCACTACTCCAACACCTGTTAAGGTGCCCGAAG
AGAAAGAGGTGCCCGAAAAGGAGCACGTGCCTGAAGAGAAACATGAGGAA
CACGAGGAACCTAAGGAAGAAGAACATGTGCCCGAAGAGAAACACGTACC
CGAGGAGAAACACGTACCCGAGGAGAAACATGTGGCCGAGAAGAATGAGA
TGGAGGGAGAGGTTACAAAAGAGATTGAAGAGCCAAGAAGAAATCCCGAG
GAGCAAGAAAAAGAACGCCTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033961XLOC_033961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053815-exon-scaffold_234-1491911889:449671..449729TCONS_00053815-exon-scaffold_234-1491911889:449671..449729Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:449671..449729TCONS_00053815-exon-scaffold_234-1510915933:449671..449729Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:449671..449729TCONS_00053815-exon-scaffold_234-1575043694:449671..449729Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:449959..450010TCONS_00053815-exon-scaffold_234-1491911889:449959..450010Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:449959..450010TCONS_00053815-exon-scaffold_234-1510915933:449959..450010Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:449959..450010TCONS_00053815-exon-scaffold_234-1575043694:449959..450010Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:450279..450391TCONS_00053815-exon-scaffold_234-1491911889:450279..450391Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:450279..450391TCONS_00053815-exon-scaffold_234-1510915933:450279..450391Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:450279..450391TCONS_00053815-exon-scaffold_234-1575043694:450279..450391Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:451535..451759TCONS_00053815-exon-scaffold_234-1491911889:451535..451759Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:451535..451759TCONS_00053815-exon-scaffold_234-1510915933:451535..451759Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:451535..451759TCONS_00053815-exon-scaffold_234-1575043694:451535..451759Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:451984..452104TCONS_00053815-exon-scaffold_234-1491911889:451984..452104Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:451984..452104TCONS_00053815-exon-scaffold_234-1510915933:451984..452104Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:451984..452104TCONS_00053815-exon-scaffold_234-1575043694:451984..452104Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:452622..452810TCONS_00053815-exon-scaffold_234-1491911889:452622..452810Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:452622..452810TCONS_00053815-exon-scaffold_234-1510915933:452622..452810Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:452622..452810TCONS_00053815-exon-scaffold_234-1575043694:452622..452810Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:453451..453598TCONS_00053815-exon-scaffold_234-1491911889:453451..453598Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:453451..453598TCONS_00053815-exon-scaffold_234-1510915933:453451..453598Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:453451..453598TCONS_00053815-exon-scaffold_234-1575043694:453451..453598Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1491911889:453824..454351TCONS_00053815-exon-scaffold_234-1491911889:453824..454351Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1510915933:453824..454351TCONS_00053815-exon-scaffold_234-1510915933:453824..454351Clytia hemisphaericaexon
TCONS_00053815-exon-scaffold_234-1575043694:453824..454351TCONS_00053815-exon-scaffold_234-1575043694:453824..454351Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053815-proteinTCONS_00053815-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:449671..454351 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.839196	1.12876	0.753592	0.737272	9.28777	10.1147	130.624	131.797	83.7148	100.372	67.2552	34.2664	104.523	93.9578	119.213	180.13	114.961	88.3956	66.4449	75.5493	88.7764	94.1645	47.0485	50.1041	70.6204	72.3715	16.9035	23.1638	205.271	161.656
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053815 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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