TCONS_00053819 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053819
Unique NameTCONS_00053819
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length828

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053819 ID=TCONS_00053819|Name=TCONS_00053819|organism=Clytia hemisphaerica|type=transcript|length=828bp
CTCAAAGGAGTGTAATGAAAATCAAACAAGTAAACCGGTCCCTGCTGTGA
CAGAAGTTACCTACCATAACCCGAAAGACTGTTGTAAAAGTTGCCAAaga
aataagtatttctttGTTTTACAAGGACTTTTCAATATTGTTTTATTGGT
GCTaataattattttgtttatgaTGCTAAAGAACTTGAAAACGAGTATGG
ACGATAGTTTAAGTTTACATACGAGGACTAGGAGACTGCACGATGACCCA
ATATCGAAAGGCTATAGTGTCAATCATAGAAATGCAAATAGGACTGAGCA
AAAAACTACTGAGAGACCTGCTGAACAAAAGGCAACTACTGAGGAGAAAA
CACGTAAACCTACAAAATTCCTGGATAAGTTACACATACTAGAGACCAAA
GTCCCGCTAGAATTGAGAAGACGCTATACTCACAAAGAGCCAGAGTCTGC
ACGAAATTCACCAGTACCATTTTTGGCGAAGATTCAAAGTTTGACGTTGA
AAAATGGTACAGAATGCACTTGCATTGGTCAACCTGGTTTGCGGGGAGAA
AGAGGGCGTAAAGGGCGTAAAGGAAAAAGAGGAAAGCCAGGTCCTCCAGG
CCCAGCCGGCCCTACTGGATCGAAAGGCATCGGAGAAAGAGGTCCTCGTG
GTCCCCCAGGGAAAGCTGGACCACGTGGAGATGTGGGAACCATAGGATTG
CCAGGTCCTCAAGGTATCCAAGGTGAAAAGGGAGAACCTGGAAGAGCATC
GATTCCGAACCTGCCTGTAGTCCATGCGAGCGGTTATCAATTCCTATCTC
CCCTGGATGGTATGCCGAAAGGTATGTA
Run BLAST on NCBI

transcript from alignment at scaffold_234:4454..23424-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053819 ID=TCONS_00053819|Name=TCONS_00053819|organism=Clytia hemisphaerica|type=transcript|length=18971bp|location=Sequence derived from alignment at scaffold_234:4454..23424- (Clytia hemisphaerica)
CTCAAAGGAGTGTAATGAAAATCAAACAAGTAAACCGGTCCCTGCTGTGA
CAGAAGTTACCTACCATAACCCGAAAGACTGTTGTAAAAGTTGCCAAAGA
AATAAGTATTTCTTTGTTTTACAAGGACTTTTCAATATTGTTTTATTGGT
GCTAATAATTATTTTGTTTATGATGCTAAAGAACTTGAAAACGAGTATGG
ACGATAGTTTAAGTTTACATACGAGGACTAGGAGACTGCACGATGACCCA
ATATCGAAAGGCTATAGTGTCAATCATAGAAATGCAAATAGGACTGAGCA
AAAAACTACTGAGAGACCTGCTGAACAAAAGGCAACTACTGAGGAGAAAA
CACGTAAACCTACAAAATTCCTGGATAAGTTACACATACTAGAGACCAAA
GTCCCGCTAGAATTGGTAAGGCTAACAAATTTGATTCATCAAGAAAGACA
TTTCTCATGCATCAAGATAAATATAGATCCTTGATTTGTAATTAATATCA
ATTTCTCATAAACTTATTGCTGTGTTAGAAATGCTGCCAACTTTCTAAAA
CCATTTTGTAAGAATTACTCTAGATTGTTTAATTGATGGATTAGCATTTT
CTGAATGAGAGAAATTAAACCTTGTAGAAATTGGTGCTCCTATATTATTG
ACAACAAAAATTGGCTTGTATTTTGTAGAGAAGACGCTATACTCACAAAG
AGCCAGAGTCTGCACGAAATTCACCAGTACCATTTTTGGCGAAGATTCAA
AGTTTGACGTTGAAAAATGGTACAGAATGCACTTGCATTGGTAAGAAAAT
TAAGTCTTTTAGGATAAAGCTTTCTTTAACTAAACAAAGGATAATTAATT
GCCTCTTTTAAACCTTGTTCTGAAATTTTCAGCTTTTCTAATAGCACTAA
AAACAGTTTTAATTTCTTGATTTAGCAGTTTTATTTTTACAAGTTACAAT
GGCAGAGTTGAGAGAGAGGGATAGAGAGACTGAGATTTAGCGTTGTTATA
ATTCAGTTGGTAGTGTGATATTTAGTTATGTTTGTTAAGCTCCTTTACAC
ATAGCTTATCGATACTTGCTTTTGGATGAGCACGTTAATTTCAGCATTTA
GATTAAGTCCCTGAATTAAATCTTGTACTGTTATTAAAATGTATTTTCTT
ATCATGATGAAGGAGAGAATTACAAAGTAGACTTTTTTTCTTGTGATATC
AGGTTATGAAAGTTAGCATTTTCTCTTTGATTTTATCTTTCCAATTCTTT
ACAATGGAGCTAGAAACTGTCTAAATTGTGGATACACAAGGCTGACTTAG
CCTGTCACATTGACAATTTGGTGTCTAATCATTTTTTATTTATGTCATCA
TATTTTTGGCTGAAGGAAAGATAAGCGATAAATTTCATTCAGAAAAAGGA
AAGCTGAAACCATAACAAATTTAAAGTTTCTAATTATACTTCAGTTCTTG
AAAATACTTTCCTTGTTTACTGGTCGTAAATGTGAAATGATTGGTTTTAC
TTAATCGTTCAAAGTAGAGAAACCGTTGATGTTCTCTAACGTGACCACAA
TGTTTCCATTAAAATATTGATTCAGTTCTTTATTGTTTCCAACCAACTCA
TTGTAATAATTTTAATTCAAGGTCAGATTGATGTAATCCTTATTAAACCT
AATAAAATTGTAATGGATGACAAAAACCAGTCAGTTTATTTCTAGACCAT
TTAATTTTGCTGGATATAAAAAAAATAGAGGATTTTACCATAATTCAGGC
AAAGAAATATTTCAGCAGTTTCTCAGCACTCTTTCTGTGGGAAAATTATC
CCATTTTTTACTGCTGTTCCTATTCAAATGTTTAGGCTTTTTTGCATGGT
CAAAAAAGACAACAGACAGTAAAGTGCTTCTTTTTGATAGATTTGACATT
ATATACATATTAGAATGGTGACGGTAGCACTTTAAAAACACTTCACATAA
ATTTAAGATAAACATACCGAAATGTTTCAGTTGGCCAATAAATTTATGCG
TTGATCCCTCAAAATAATAAACAACCTATTTATTTTTGATAAGCCAAAAT
TCTTTCAATTAAAAATCAATAATTTTTGTTAGATTAAACTTTTTGGTATT
TTCAGGTCTGCTCTAGGTTCTTTAAACTCTCAGGGTACTGTTTTCTATCT
TTTTAGCTTAGCTTATTTGAGGTCCTGCTGTGAAACAGTTAGAAGTTGCA
TACTAATTTTAGAAATTCAGTTTAAAAGGAATCTTTGTTTAGGTCTTTTA
GCCTAGATGTGTGAACAAACCTTTCTCATATATTTAGTATCTGTGAAGAA
CTAGTCACAATCAGTGACATTTTGAAAAGTTTGTTTTAAGTCACAAAATT
TGTTTAAAGCAAAAAAGGGGGCAAGGGAAACGTTATACAAATTGTCACAT
TAAAATGTCTAAGCGAAAGAAAATATATTCAAGGTAAACAAGGTTCACTA
AACCTAGTGTGAATGGATTTTGAGTGTACATTTACAATCAATCTAATGTT
TGCCTGAGCACAGCTACTTTATCGTATTATTGATTTTGTAGTGACTATTT
GTATCAAGGGACACAGTAGAAATGTCTATCTCCCCCATTGTCTCCTGAAT
CCATCAATCAAATTCATAGAAATTTCAAAATCACACTTTAATTATTTGAC
TTCTTTTTGTATGTTTTACTATTAAGAATTCTGAAACAATTTTACATTCT
TCTATGAGATTTAGAAACTTCCCTCATTCTAGACACTTTAAAACCTCTTT
GGAATATGCTAAACCTGATATGTTTTGATGCTGCCATTCATCAAATAGTG
TAAAATGATTTCTCGACATTGACAGTTTTCTCTACTCCCACATTCTAATA
AACATTTTGAAAACACAAAAAAAAATGTTCAAAAACTTGTTGACTAGTAT
GTCAAAAAGAGGCTATGTGAAAAAAGAGGCTGTGGCCAAAATATCAATGA
TATTTTCACACGGGAATTTTTGTTTCAGATTCAATGGATATATTCTATTT
ATTTCCTGTTAATCTGCCCGTTAACTTTCTTTTTAGTATGANTCAGTTTA
AAAGGAATCTTTGTTTAGGTCTTTTAGCCTAGATGTGTGAACAAACCTTT
CTCATATATTTAGTATCTGTGAAGAACTAGTCACAATCAGTGACATTTTG
AAAAGTTTGTTTTAAGTCACAAAATTTGTTTAAAGCAAAAAAGGGGACAA
GGGAAACGTTATACAAATTGTCACATTAAAATGTCTAAGCGAAAGAAAAT
ATATTCAAGGTAAACAAGGTTCACTAAACCTAGTGTGAATGGATTTTGAG
TGTACATTTACAATCAATCTAATGTTTGCCTGAGCACAGCTACTTTATCG
TATTATTGATTTTGTAGTGACTATTTGTATCAAGGGACACAGTAGAAATG
TCTATCTCCCCCATTGTCTCCTGAATCCATCAATCAAATTCATAGAAATT
TCAAAATCACACTTTAATTATTTGACTTCTTTTTGTATGTTTTACTATTA
AGAATTCTGAAACAATTTTACATTCTTCTATGAGATTTAGAAACTTCCCT
CATTCTAGACACTTTAAAACCTCTTTGGAATATGCTAAACCTGATATGTT
TTGATGCTGCCATTCATCAAATAGTGTAAAATGATTTCTCGACATTGACA
GTTTTCTCTACTCCCACATTCTAATAAACATTTTGAAAACACAAAAAAAA
ATGTTCAAAAACTTGTTGACTAGTATGTCAAAAAGAGGCTATGTGAAAAA
AGAGGCTGTGGCCAAAATATCAATGATATTTTCACACGGGAATTTTTGTT
TCAGATTCAATGGATATATTCTATTTATTTCCTGTTAATCTGCCCGTTAA
CTTTCTTTTTAGTATGATTTAATATCATTTGAAAATTTTCACGTGAGTGA
CGATGAGAGAAATTGATGGGAAGCAAATCAATTAGCCTTACCAAATTAAT
TTTTATACATCCCTTATTATACACATTCGGTAATTTTCAGTTCACCACAT
TCAGTTGAATCTCAGAAGTTTTAATCTCTCAAAGAAAATATGCACACAGA
AATTACCCTTTTAAATTTGATGAGAAAAGTAGGTCTCATCTATTTCCTTG
AAATTATCATGATTTTATTTAATTCCTTTGTTTTTGGGCACCATAGCTGA
CAATTAGTAATTACAGATAATTCCCTAAATTAGAACCTTTTGAACAATTT
ATATTTTGGCTTGGCCAAGAAAAAAATTCAATTCCATTAATAGATCAGTA
GTATAGTGAAGCTGAAGGGTGTTTAAAGAAACGAGTTTTGTGGTTTCAAA
AACTGCTCAAAAATTGTGGTTATCGTTATCTATCAATAAAACTCTTAAAC
TTTTGAATATGTTATTTCTATATCGAGGACCAGTGTTTAGTTCAACTTTT
TGTTTTTAAATTGTTTTTGTGAAAATAGGTTTCTTTTTTAAACACCAAAA
CGTCATCTACAGTCTTTTCAAACCATAACAACTTAAATATTATAACAGTT
TCAATATGGTAAACACAATGTCTTTTTACTTGCTTGCCTTATGACATGAC
CTTTTTATATACCAATCATTATAATAATGATATAAAAGCCCCCATGTAAT
TTTGTCAGACGATTCATATCCTAATATAAAATGCAATAGTGCAAAAGAAA
CCTATGGCAAAACAACATAATAACTTGTAATGAATAATTGTTCTGAATGG
TGCCTTCTTATAAAGCAACAAAGGAAAAAGAGATTCAAATACTCTAATTA
CAAAATGAAATTTCCAAGACCCTTGTATGGTATTATCACTTTATGTTAGT
ACTTGGGCTCTTCACTGAGTCAAATAATCAGCTCTAACAGATTTCTTCAA
ATTCAATACTACATCTCTTCAAGGATTTTTTGAAAACTTGCATATAGAAT
CTAATATCAGAATTTTGATCTTCGAGGCACTTCATAATAGTCTTAAAATT
TTACTTCAACCATAAGGGACTTAGATCAAAATGACCTCCACAGAGGATTA
TACTGTTACTTGATCTCAAAACTAAACTAGATATGGGGAAGACTCGATAC
CCCCTTATTAACAAGTCCATTTTCACATCATTGATATCAAATCTGAGTGT
ATATTTTTGAAGTGACTGAATAGAAATTTTTACAAGTTGCTCACATTATT
GGATACATTAAAGAATAAAAATATCCTTTTCATTATAAGAGATAAAATAA
TTTGTTTCTAATGCAGTAACAAGTCCAACTATAATACTTCTTGTAAAAAT
GTCCAGCTTAATGTTTGATAGTTTGGTTTTTGTTGAGAAAGGAATATTAT
CTAACACCTCGTTCCAATCAAAAATCGAACAAAGTTCTCCTCAATATTGG
TGTCATCACTTTGTGGGGGGATTTTTTTAAGCACTTTTTTTAAATAAGGA
GTGTTTCTTAAGAATGATTATTTTAAACTGTCTTTCAGAATTGGTTATTT
CTAAGTAACTTTATTTCAATTGATATCATTAATCATTTTGAAATATTTTT
TGTTCCCTCTTTGCCCCTTGCTCATTTTTGGCTTACTATTTCTTATAAGC
CCCTCTTGATAAGCCAGATTAGATGGAGTTTTTATAAGATACTTTAATAA
TTGGTCATTTGATGTAATAAAAATGATGCGTTCTTTAGAAAAAGTAACAG
AATTGTTTTATTATTGATTAACGACCAACCAAATCAAATAAGAGCTTCTA
AAAACTCCATCTCGTCCCTGATAAGCCCATACATAACACGAGGTAAATTT
CAATTGTCAACACCTATTCCTAGAATTATTAATAGTTCCTTCCTGTTAAA
ATCATGAAAATCTTTTGGACTTTAAGTATTGAAGCAGCAGTGGGTCTGAG
GAGGTAGGATCAAAATTTATGACGGAGAAAGGTTCATTTATCGATATATT
CCGTATATAATGAAATTGAAACCCTCTTTGAGAAATATTGAGTTAGTGGG
AAAAAACCATGTCTCTTATAAAAAAAAGACCATCTTTTAGTGCTTACATA
AGAATTATTGCACGTATCAGTATACATTCATTACCCAAAAGGGTATCATT
TGATATTTTGTTTTCAATCTCATGGTAATAAAAAAGTCATCTACCAGATA
TATGTCACACAACTCGTGTTTTGTTGTTTTGTTAAAACTCAAAAGTTTCA
AACAAGAAAGACTCACTCCCACCCAAACTTGACTTACATTTATTAATCAT
CCTATGGGTTCTGTATTTTAGTAATAATCTAATTCCTAATTGATGTCAAT
TTTACCCATACCTTATATAGATTTTTATGTGGTTTCACCTATCAGGTTAT
TGCATCAGAAGTGTCTCGACTTTAAAATGGTTAGATTTCAATTTTAAACG
TGTCCCCTCTATCAGTTAGATTTTGTCCGTCTAAAAAGGTTATCATGTAT
GTCTTCTCAAATCGAATCTTGGTCATTACAGGGTCATAATAGGGGTTGAG
TGGTGTCCGTTGTGTCCGAGATATTTGCTTTCACGACTCCACCCATCCCC
TAATTGGGTCTTAGGGTTTGTAGCTTTTCCTTCAACAATACATAAAGAAA
CGTATTTGGACTTAAAATGAAACAAAATGTATTGCAATTTGCTATACTTT
GGTCTGCGTTTTGCACTTTTTCAAATGATTTCAAATTGTTTACCAAATAA
TCCAGAATTCAACTACCCCTTTTTTTATAAGAACATCCAAAATTTTTGTA
GCCTTCGGATGTTCTTAACTTTTTGATTTTTAGCCTAAAAATGTTCTTAA
CATTATTTTCTTATTTTCACCATTTTTCGAGCATTTTAGAGTCTGCAAAG
CCTTAAAATGTTCTTACTCGTTCTTAACATTGGCCATCGAAGCCTTATGT
TCTTATAAACGTGTAGGCTGCAAAATGCAATAAAAGGCAAGCAAAAGTTT
ATGTATCCAAAGTTTATGCCGCATCAAGGGTTATGGCAGTATTATTTATG
ATGTCCACTAAATGAAAATATTATCTCTTAAAATCAACAAAAATTGATGG
CAGCAAAGTAATAAGACACGTGCGTGGTAATTAGATGTATTTCCCAGAGA
TGCACTATATTTTTTATATGATTAATAACACACACTTGAAAAAAACGTAC
TCATTAATATCACATATTGTTTTTAATATGATGCGATAAGCTAAAAATGA
TGACGGTGATAAAATATCAGTCCATCCATTTTTCACGTAAATTGTATTTC
AAGACAAAGGATAATCTTGGTCGGTAATATGCCGTGTAGTAAGGCTGCTA
TTTCATAGTGTGCACACTATTTTTTATAAAAGCATACAACTTTCTTAAAT
ATAACTTGTTATAATCTCATAACAGATCATCCATTCTGCGCATACAACGC
TTTCTCTAAAGGGATGTAGCGAATGTGACGATCTGACCTGGTTGTTCAGC
AGAAACATCCCGCGATGTCTTTTGCCTTAAAACGATAGCGAAACGTCCTG
GGTAAATTTATGTTCACGACTTAATGAGCCATGGCATTTAAAATGAATAC
GTGGCATGCTTGGAGTAATAAAAATCTGCTCGGAGATTCGAGTCATAAGG
ATTAAATATCTGATATATTCAGACTAGAGGAACTTTGGGAATCCAATCAA
ATTCAATTGAAGATCTAGACGGTTAATTTTCAAACTAGGCAATGTAAACT
TGAATTCCATTGAATAATTTTGGGGTCATTTTTTGCAATACCTCGTACAG
TATATATCGTGCACTTGATCTATAAAAGACCTTGAAGATTATAGAATTAG
CTTTTGAAAATAAAGAAGTCCTTCCGTCTTTATTTACCACGTCTATTATT
ATTCAAAACACAACAAGTCTTTAAGATAACACTGAGATTATCAGAACCTC
CACGAGAACACAATTTCTTATGAGAACTACAGTGAATTTTTGTTTTTGTT
CGTATCTTTTTCTCATTTTTAGGGCAAAAAGTTCATCAATTTCAGGCTCA
GCATTGTTCTTATAAAATTGTTCTTACAATTAAAGGGTGATGATTTTTGC
TATTGTCTGTTTCATTTAAATACAATATTTTTGACAACATTTTTATGAAA
TGAGCTTTTAGGTCGAATTATCTCCAAAAATGATGGTTTTAAGTATATTT
TGTTAAAACTCGTATGTAAAAACAGACTGTTATATAAAACCTCTATCAAA
GACTTTGCAATACTTTTTACCTCACTTAATCTATCCGCCATTTCTAATTA
AATGATAGGTAAAACACGTGTGAGCCACGTGTATGATTCTTTTTTCCATG
ATTTATCCGAAAAACCAACGTTTTTGAAATTTGAAATGTTGATCATGTAC
ATTCTTTATAAAAAGTAACCGTCATAAAAGTAACTACAGTATATGGCCCC
CAAAACGGAGACGGCCCCCAAAACGGAGGTTGTCATTAAAATGAGGATTC
TGACTTGTAGATTTATCAGAATTAAACGATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAATTGAAAATTTTGAAAAAG
AACTGTCGGGAAATAAAGTAGAGATGTTAAAGTTTTGCATGCAAGAAAAA
TTTTTGTAAAACGTCTTTTCCTCTAGCTTTGAGAAAAATTTTAAATTTGA
TCGCCGTTTTGGGGGCCACATACTGTAGTTGTTTTAATGCACAGTGTTAA
CTATCAACGTAGATTTAGACCATATTTCAGACGTTACAGTTTCGTGTCGC
TCCGATATGGTTCCCGTTTTGGGAAGAATATTTTCTGGTTTGTTAAAAAA
TCATAATTGTCGCAAAACTCTTCAGAACTCTTCAGAAGTTTTTGGCTTTT
TAATGTCAGATCAGTTTTTATATTAAAGTATTTAGGCTCTATACACGCTT
AGTCAAGTCAAAGTTCATCAGCTGAAAATTTGTTTTAATTTAACTGCTAT
AAATTTGTATTTTGTGATCACGTTCTCACAATGCATTACCCCTTATTAAA
TTTACAATTTTGTTATTACAATATATAGCAATGTGCCCTCCCGGTTATTA
CCATAATGGCTTTATGGCAACTCCTTGGGCACAGGATGTACGGTTTTGTT
ATTAAAAACTTACATAATGGTGGTTAACTTTCGAAATATTTTAACCGGAG
GGACTATTGCAGTCCTCTAAGTCAAATAACTTTGATTTGCTTACTGTTTC
ATTTTGATTAATTTTTCACTTTTATTTCTTACACAGGTCAACCTGGTTTG
CGGGGAGAAAGAGGTATGAGCTTTTATTACTTAGTCAAGTATGTTTTAAA
CCCACCTTTCTAAACGGATGAATTTCTGACGCGAGTCTGTTGCCTCGCTT
AGCTTTAGCTCTTGGGGTAGTATGCTTAAATCTGGTTTTGGGTTATCAAG
ACTTTTGTGCATTAATCAAATTTGAGCAGGCGCAATTACGTAATGTAACA
CTTAAAAACAAAAATCCATTTATTCGCCGTGATCTGATGGCAAGTTTTTG
GTTAAAGATATTATACACTAATCAACCGTCCTTAGTAATAGTCCAGAAAG
GGGCATTTTGTTATTAACCAGACTAATGTGTTTTGCGATGCTCCTTTCTT
GCAAATCATAGTGAAATTGAATTCCCTTTGTCAATATGTTTTCAAGGGCT
TTGACCTTTGATTTTGTTCACACTTGAGAGGTATCTTTCCATGTGTGTTG
TCTACATAGTTTATTTGACTCATTCTTTGTCTTAATGATCAATAATGGGG
TAGAAAATTAACTTTCGGGTATATGCATTCGTTTCGGTTGACCTCAAAAT
TTTTGTTTTTTTTTGTGTTTTTTGTGTAATATGTATTACACTATCTTATC
AAACATATTTTAGTTTGTAGATTTCTCCAACAAAAGCGAATTTTCACTTT
AGAAACTTTTTGAGAAAAAATTAAAAAGTTTCTCATCAAAATTAAAAAAC
TTCATACGCAAACTCGCATTTTTTCGGGCACAAGCAGTTTGCCATTAAAA
CTTGGTACATTTTTGTAGGTCATTCTGTTTACCTGATTCCTATAAAATGC
TTTGAACACTTTATATTAAATATTGATTAAAAGTTGCAAAGGAATGCAGT
CATTTAGTGATGCCCTTATTCCGTTTCTTGGTGAGCTCCACCTTGATGAT
TTTCTGAAAAAAGAAGCCTTTCAAGTGTCCTGACGCTAATTCACTTTTCC
CCCCACTGCGAGAGCTTCCAAAGTTTAAGCTTACGTCAAAAATCGAATGT
TTGCCCAAAAAAACCTGGAGACTTATTAAAAAAGCTCATCGAGATATTTT
TTGGAAGTCTCCTTTTGCAATACAACTGTGGAGTTTTTCCAAAAAAAAAC
ACGCTTCCTGTATTTATAAAGATTGAATGACAATGTCTGCTCTATTTTCG
GAGGGTTTTATTGTACAATGGGGTCATTGATGCACTTGTTACTGCTGGGC
CTTTTTAAGACTTAATCTGTGCTCTTTTAAAAGGGGCTTAACGATTACTA
GTCGTTTCACAATACAGGCATAAAGACATTATAAAGAAATTGAAAATTGA
TGAATTAATTGCCTTTATAAGAGAACGTTGTCATCATGAATAATAGAGGG
CTTTAACCGTGTGTTTTGATATCAAAGTTTTTATCAAAAACCAAAATGGT
ATTGTTTGAATACAGAATAAAAATCTTTTTTGTCCATTTCCTCACAAGGT
TACGAAGTGGAATCGACAAACAATACTTAAAACCGTCTTGACTTTTTTTC
CATTTCTTATAATAATTAACCACCTTAAGAAATCTTTAAAGGAAATTGAT
TCAACCCTACCCTTAGGCCAATATAAGGACTTACTTTCTCTTAATTGCAT
AATTTTCAAAATGCCTCAACATGCCTTTCGGAAATTTATTTTCTGAAGTT
CCCCCTTGGATCAATTTTTGTCTTTAGTATAATGGGCGTATAATGCTTTC
TTTTTGCTTATTATCTGCCTGATTTTTTTACTTAGGTATAAAACACTGCC
ACTCGTTATTATATTTATAACCTTAAAGTACAAAACTATCTCATTTCTTG
ATACTTCCGGTTTGATTCATATGTTTTGTATTATCTAGGTCCTTTTTTTG
TCTTTTTGAATGGATTCGATTCATTGCTTTTACAGTGCATGAAACCACCC
ATTTTTGGCTTTTCTACCTTAATTACATCAATCGAAAGTATCTGCATTCG
TGCTAGCTGGTTTTAACCAGTCTGGACCGTTTGTTAGGTGGAACTGGGAG
GTTCCTGTTTCAGTTGTTTATTTAAGGAGCTACTAATAAGACAAATTAAG
GATATTTCACACGTTTTACGCTATTTTAGTACAATTCAAAACCCTTTATT
TNTAAGGAGCTACTAATAAGACAGGATATCTCTTTAGTACAATTTAAAAC
CCCCTTACCTCAGACTATTGATGCCTGATATTCTTATCCGTGTACATTAC
AAAGCAAAATTCTGTATTCTAAGTTTTTAAGCTAGATATTATATATTAAA
CTATAGCCTATTAAAGTATTGCATCATGTTATCCCAGGCTCAGCATGTGT
TTATATTCCCATGATTTTCGACGTCACGTGAGCTTTATGTGGGTTACAAG
GAACAGAGTTTATAGAGAGTCCTGGGTTCGTCCGACATTTTTAGGTCTTC
CAAAAGCTCTTCATAGCTCGAATCCTTCTCTAATTCGAAGTAACTATCTT
GGATATACTACCTAGGTTCCTTAAAGGTCGAATTAGAGAGAGTCAACCGT
AAATTCATTTAACATAACGATCGTCTATAAATTAATTCATATCGCCTTGA
AACCTCAATAAATTATTTTAGAAATCCCACAAATTTGAATTGTTTGTTAA
GTTTATCTTTTCCATTGATACTTTTCAGTGAAGAGCTTCTTGAGTTGGCA
CAGAAAACGTGAAGAAATTAAGTGGATAAGATCCATTTAAGTCGAAACAA
ATTTGCTGCATCAGGAAATAGTTACTCGTGGCTAACACAACGTTTTTTTA
TTTGAATGAAAGGAACCAGCGACACGAATTTAATTAAAAGATACACATGC
ATGATGACTTAGATTTATCATTATAAATGATCGTCGTTTTTTTTTGTTTT
TTTGAGAAAGCGAAATGATATTAAATTTTTTTCGTAGTAGTGTGTGGTTA
CTGAACCAATTTCCTGTTAAAAAACTAGATGATGACATTTTTTATTCTAA
AACGTGGTCTCCGATATACGGGTTGCTATAAACAGTACGATATTTTGAAT
GATCTTTGCACTTTTTGTATAAGTTGTGGAGGTTCTTAGAATCTACAACA
ATATGTTTTGGTTTCGGTCCTTAAATGCCAAACAACCTTGATTCAGTTAT
GAATGTTGTAGATGTTAGATGGACGTTGATGCAATGCTGTGTGCCAATCA
AACCAAATTCTTGGTATAAGCCCGAGGGGTAATATGACTCTAAGATAGGT
TTCTAGATGACGTTGTTCGTAATAACTTATTGTATGAGAATCAAAGGAAA
ACTCCGGATGATGCATTCACAAAGTATTTTTATATCTATGTGGGAGAGGG
TTTAGTTGGTCCTTTATTATAAAGAATTTTACTTTTTATTGTCCAAAAAA
AATAAATTATGCTCCCGCCTTAACTTGTCAACAAATTCAGTGATGAAAAA
ACTTTCATCAAACCATCGAGGTTGTGGTGCTCACAAAAATCTTGACACAT
TTTTTCATCTAATGATATTTTCACGAAATTCCTTCATATTTTCCCTTTCC
TTTCTACATCACAATATATCCTTTCGACTTTATGTCAGATTTCAGTTAGT
AAAATATCACATCGCGTTTGTTGATCAAAAATCCAAGGAATTTCAGTTAT
TCTCACATTTAGAGAGTAAATTGACGAAATCATTAAAAAAAATTTATGAA
TGAACTTATGGAATGATTTGAGATTACTACATTTTTATGGATTAGTCAAT
CCTACCACTCTACTTTTCTACTTGTATATTTCTTTTATAAGAACATAAAA
TGGCTCTAAAAACTTAGTAACATTTAGTAACAAATATACTTGGTTGGCGA
AAGAAGTCTGAACAATGCCCGTCCGTCTAATATCTTGTTGGCGTTCATAC
AACGTTAGATGGACGTTGTATAAGGCAGGAGAGTTTCACCGGAGGTTAAA
GAATAAAACCCGGAATGTTCAAAGGTTCTAAACTTGATTCATGGTTCTTT
TAATAAAAACGAGACAGCACTGAGTCAGCTTGCAACAACATGAGGCATGT
TGTGCCATCATACAGACTTTTAACATTAAGTAAAAAATATTTTTTATTTC
AAATGAAACAGTCTCCTTTTCTTGTGGGCGATATTTTGTAATTCGGCACA
GCTTGAAGAAAGACTGTTATTGCAAATCATATGATCTAGTGTTGTTTATA
GGTCTGTGAGAGAAATGTTTTTCTCAAAACAATAACAACAGTTGTGCGTC
TATTGAAAAATCTTTAACATGGAAGCATCTAATTAGAAGCTATAACTTCC
AAATAAGGCCGCAATACCTTCCAGGAGGCCTGCGTTTACACGTGTGAATT
TGGTGAAAAGGTGAAAAAAAGGTATCCTGACCAGCGGCAAATCCCCGTAC
TTATTTGCCCAAGCAGCCCCCCCCCCGAAATATTTTATTCGTTTTCATCG
TCATGGCCTCAGAATCAGGTAAAATTTAGTTCAGCTCCTTGTAGTAAGGC
TTTTAGTTAACTTTGAAGATTGATCTTAAAATGTTTTGCTCGCTGACTAC
TACGTTACTACTATTTCAGATAATCGAGTAAAGACCATAATACAAAATAC
ATGTCATGGGTGTATTTTCAAGAAATCCCTCTAAGGATTAGTTCATTCAT
AAAAATCTAATGCAAGATCATACAAGCTTTTGTAAGCCATAGTAAAAGAG
CATTTATGAACTAAGTCTTTATTTGATAATGCCTTTGGACCTTCTTTGAT
ATACATTAGGCAATAAAACACATACAGAAAAGTCTATATACCGCCACTGT
TGGTTTTATTTGTTTTGTACGCAATTTTATTAACACAACAATAAGCCAGT
ACTGATCCATTTATGTATTAAAGCACGGTCATATGATCTACACATAGGTA
GTAATTTTTATATAAGCACAAAAGCTCGGACATGAAACCTGGTAATATTT
TGGGCATTCGATAAAACCAATATTGAAATCAATCTTTTTGGAAAATATAC
CACTACTTGGTAATTGAAACCCTTGCTCAAGATAAAAAGTATTATCCTGG
CTTTTCTTCCAAAAAGACATCCAAGTTTTGTCACTTCTTGACGTACTTTT
TGTTAAGTATGGTCTGATTGACCGCCATATTGGGACAATTGTTTGTGATT
ACATTTGACGTCAATGTTGCTATAGAAACACTAATTTCGTTTTTTTCCTA
TTTATCATATGGTTGTTGTTTTTATGTGAGGTTTTCCTTGGTGTTTTTTT
CTATCATCACAAGCTACGTTTGGAACCCCTTTTGTATTATTTATTTATAG
CAACCTGACCACTGACCAGCAGCCGTTGACCTCATACAAATACAAATGCC
ACAGAGAAATGTTGATTTTAATGATTTCAAAATATTCTACCTGCCCATTA
TACTACTTTTATACCAGTAAATTTTTGTTGGGGTTGATATTTGCAGCAAG
GTCGTTCTTATGTTTAGGGCAATATTGAGGGAGTTGAGCCTTTTTACCCA
CTTTTTTTTATTTTGGGCCTCAAATGTTTAAAATTATAACATGCCAGGCT
CATTTCTCATCTTAAACTAAATTGTTCTTATTTTTCGGCATTTTTTAGCC
TTGATGTTCTTATAAAATTGTCCTTACAAAAAAAAGAAGCGTGTATTCTG
TTTTGCCAACCTCTCTACTTCCTATAATAATAAGTTTCCCGATAGCGGAT
GAGCAGAAGCATATGTTATAGTATGGTGTAAGTTTGCAGATTTCGCCCTC
CATTCCATAGCACCAATCTCAGAAGAATTATGTTACGGTACAGATCATAC
GAACTATGGAAAGTCACTCAATTAAATCAACATTTTGTCCGCCCGTTTCC
AGACTTTGTTCGTTAGTTCGATAGACATTATTTGTCATTGATTTGGTATC
TTGAAATTGATTTCTCTTTGCACAGGGATGATTTTCTTGATTGATTGACT
GATTCTTGAAATTTTTTCTCAAGAGCACAGAGTTTCATATATCAATGACT
GAACTTTGACATTTTATTTTTCTTCATTTCAAATATCTTTTTCTATCTTT
CCTGGTTTTCTCTTTACTACATAGTTAAATTGATATTTTTGATGTGCAGC
AGATTTTCATTTTACCTTGTAATTCAAATCACCCTAAGCAGGGTTAACGG
ATTTTTTTGGGTGGGGCTTTTCATGCCTTATGAAATCCTCCTATTATTTT
TTCGTTTTTAGTTGTTTGTGTAGCCCTTTTTGACAAATGGGCTTTTCCAG
AAAATTTTTGAATATGGGGGGTGGAGGATATAACAATTTTCAGTGATTTA
CCCTCCCCCCCCCCGGACAAAGTGACTTTTGGCCCCACGGACAATGGGTT
TTACCCTCCGGACAAGCATTAGTTGATCCCTCGGACAGAGCAAATTTACT
CCCCGGACAATGCAAGTTTTGATGATTTTTCGCTATCCCCGGACAATATA
TATCCTCCACCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CCCCCCCCCCCAATGTACGGACATTTTCTGGGAGAGCCCAATCTTACCTT
TGTTTATATATCATTATCGTCAATTCTGTAAATTGAAATTGCATTAATTC
AAAGATTCTCTCCAATCTAATTATTTTGATCAAAATTTGAAAAGGCATAT
GCTATACACCCAATTGAGTGATAGTAAAACCAGATGTTTTTCAATTTTGA
ATTGATTTTGGTGAGTCCCCCCCATGCCTAGAATGAAAATTTTCCATTCC
CCCACCCTGGCTTCAAAAAAATTCTTTCCCCCCTATACGTCCTTGTGACC
AAAAAACCCATCCCCCCTGAATCCAGGGGGGACACTATGACGGTACTGAT
GAAACCTTTCTGACTAACACGTCAAGATGTCAACTTGTCAACCGAAGGGC
TCATCGAAATACATATTGAAATTGATTCTTTTTTGTGTGTATTTTTTCAT
TGACAGACTCTTTGGATCAAATTCTTTTGAACTGTGATATCAATGCTTTT
GAAATGTACCCAGAATCTTAGTTATGAACCCAACCGAAACGAATGATGGA
CAGTCAATAAGTGGCAACTTTAAAATGAGAAAAATTACTTACCATTAAAA
ACCATCTAAATGTTACAAATTAGTACACACGTTTCCCATTCCTCAATGGA
CTGTAAATTAGGGGCCTATTCTAAATTGTCTTCAATACACTGAAAAGGAA
GTTATTCGGGACCCTGTCTCTATTTTATGCATATTTTTTAGCACACTGTC
TTGAATTTGTTGGGACTAGCCTAGATAATAGTAGGTTTTAATTTTCAATA
ATAACTTTACTAATCAAAACTATCTAATTCATTTTTCTTTACAGGGCGTA
AAGGGCGTAAAGGAAAAAGAGGTTAACCATTTTTACTAATCCAAATTCAC
TTATTTATTCATATAATCACCCAATAATTAAATTTTCTTTAGTCCACGAA
TACTTATCCGTATTTCAACCTCCCTTGAAACATAGATACTCATACTCCAT
TTTGATTGTTGATTAACCAAACACAGTAATGGTCTATCTATGATATTATA
TAGACTGTGCCCTTTGCAATAATGTCTTTATTACTTCTACAGGAAAGCCA
GGTCCTCCAGGCCCAGCCGGCCCTACTGGATCGAAAGGCATCGGAGAAAG
AGGTCCTCGTGGTCCCCCAGGTAAATATTGGTATATTATATTCAATTTTT
CTATATTTTTATCTACTGGTTTTGATGAGTTGTAAAGATATTTATAAGTT
CTTTTATTCGATTTATTAACGCACTTTTTAGCCTTTTGATACCTGATGTT
TTTGTGATGTTTTTACCCCCCTCTCTTTCATAAAATGAGGCTAGAAAGCG
TTAGGAAACAAAAGGATATTTGATTAGATTTCAGCCGGGTTAAGAATAAT
TTTTTTTCGTCTCAAAATTCAGCAAAAATGTGAAGACTTTACCTAATCTG
GCCTAATTTTTTCTTAAAATCGTTTTTCGGTCTGAAGTGAGTGAGTGTTT
GAATTTGAACAGTTAATGACCTTTTTCATTTCACCTTCTAGGGAAAGCTG
GACCACGTGGAGATGTGGGAACCATAGGATTGCCAGGTCCTCAAGGTATC
CAAGGTGAAAAGGGAGAACCTGGAAGAGCATCGGTAAGCAATATACACTT
TTCTAGATAACTGTCGGAAATCTCTTGTTTCTTGCTGTGGTCGGATTAGT
AAATTACTCCAAACTTGTTCGCAGGGTGGCCGTTGCTTAACATTTGAATG
ACCATAGTCCTGAACCAAAAAACCCTGGTCTGAAAGCTTATTGTTTTAAC
TTTTTGTTAGCTTTTTCCTTTGTTAATATCCAAAGATGAAAATAGATTTG
CTCAGTTTTTGATCACGTTACTAAGTACTCCTGTTGGGATTGGTTTAAGA
TTCAGTCATGATCAATTTTTATTTTGTGGTAATTTTATTTCTATTTTTCT
CGTTAGGAAATACATATACCTGGCAAACCTTTTTACTCCAATTAGTGGGT
CGATCAGCCTGATTTCTATTACTGTAAAAACTTATACTGACTTTTATGTG
TTTTTCAGTTTAATTCACCGAAATTGGTCTGTATTACCTTTTAGATTCCG
AACCTGCCTGTAGTCCATGCGAGCGGTTATCAATTCCTATCTCCCCTGGA
TGGTATGCCGAAAGGTATGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033964XLOC_033964Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053819-exon-scaffold_234-1575043694:23010..23424TCONS_00053819-exon-scaffold_234-1575043694:23010..23424Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1575043694:22635..22746TCONS_00053819-exon-scaffold_234-1575043694:22635..22746Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1575043694:13262..13288TCONS_00053819-exon-scaffold_234-1575043694:13262..13288Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1575043694:5754..5780TCONS_00053819-exon-scaffold_234-1575043694:5754..5780Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1575043694:5455..5532TCONS_00053819-exon-scaffold_234-1575043694:5455..5532Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1575043694:4992..5083TCONS_00053819-exon-scaffold_234-1575043694:4992..5083Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1575043694:4454..4530TCONS_00053819-exon-scaffold_234-1575043694:4454..4530Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:23010..23424TCONS_00053819-exon-scaffold_234-1510915933:23010..23424Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:22635..22746TCONS_00053819-exon-scaffold_234-1510915933:22635..22746Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:13262..13288TCONS_00053819-exon-scaffold_234-1510915933:13262..13288Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:5754..5780TCONS_00053819-exon-scaffold_234-1510915933:5754..5780Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:5455..5532TCONS_00053819-exon-scaffold_234-1510915933:5455..5532Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:4992..5083TCONS_00053819-exon-scaffold_234-1510915933:4992..5083Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1510915933:4454..4530TCONS_00053819-exon-scaffold_234-1510915933:4454..4530Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:23010..23424TCONS_00053819-exon-scaffold_234-1491911889:23010..23424Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:22635..22746TCONS_00053819-exon-scaffold_234-1491911889:22635..22746Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:13262..13288TCONS_00053819-exon-scaffold_234-1491911889:13262..13288Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:5754..5780TCONS_00053819-exon-scaffold_234-1491911889:5754..5780Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:5455..5532TCONS_00053819-exon-scaffold_234-1491911889:5455..5532Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:4992..5083TCONS_00053819-exon-scaffold_234-1491911889:4992..5083Clytia hemisphaericaexon
TCONS_00053819-exon-scaffold_234-1491911889:4454..4530TCONS_00053819-exon-scaffold_234-1491911889:4454..4530Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:4454..23424 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.52941	3.85466	1.29328	0.224156	16.2343	16.3082	9.64009	17.2339	14.0098	7.13605	8.99989	9.03384	15.0088	14.618	2.76194	2.33245	21.4113	12.7413	13.4641	11.7638	4.64052	6.67592	5.90338	9.01418	21.0668	17.0333	30.5656	15.3181	1.6268	0.224502
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053819 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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