TCONS_00053915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053915
Unique NameTCONS_00053915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053915 ID=TCONS_00053915|Name=TCONS_00053915|organism=Clytia hemisphaerica|type=transcript|length=131bp
GTGTTTGATCAGCCGTGGAGACCAAACAGCTTGCGCGTACTCAAGGTGAG
GTctcacaaatgcaatgaaaagtgtGCGGAGCATCTCGGGATAAAGGTAG
TCGAAGCTTCTGTTAATCAATCCAACGATCG
Run BLAST on NCBI

transcript from alignment at scaffold_236:81152..81282

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053915 ID=TCONS_00053915|Name=TCONS_00053915|organism=Clytia hemisphaerica|type=transcript|length=131bp|location=Sequence derived from alignment at scaffold_236:81152..81282 (Clytia hemisphaerica)
CGATCGTTGGATTGATTAACAGAAGCTTCGACTACCTTTATCCCGAGATG
CTCCGCacacttttcattgcatttgtgagACCTCACCTTGAGTACGCGCA
AGCTGTTTGGTCTCCACGGCTGATCAAACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034041XLOC_034041Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053915-exon-scaffold_236-1491911889:81152..81282TCONS_00053915-exon-scaffold_236-1491911889:81152..81282Clytia hemisphaericaexon
TCONS_00053915-exon-scaffold_236-1510915933:81152..81282TCONS_00053915-exon-scaffold_236-1510915933:81152..81282Clytia hemisphaericaexon
TCONS_00053915-exon-scaffold_236-1575043694:81152..81282TCONS_00053915-exon-scaffold_236-1575043694:81152..81282Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_236supercontigscaffold_236:81152..81282 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top