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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053930 ID=TCONS_00053930|Name=TCONS_00053930|organism=Clytia hemisphaerica|type=transcript|length=1011bp
GGGGGGACGAGGTAGGTTGGGTCTTCTTTGTCAAAATCGTATCTgtatct
ttgcggctcttgttgcTTTGtcgcactttcgttttcaatttCTAAGAATT
TTAGGAATAATGCTATTTTCCAGAACAAAAAGCGCCCATTGAATCTTCAA
ATTATCGTTGTTCCGTAATATACGAATCAaaaccaaaacattcgaaactt
caaaacaaaaacaaagattgCAGAATTTCTTGCACTGATCAACTCAACTG
ACTGTCGCCTCTCGttcagaaagaaaaattaatataCCAGTCCAGTCAGT
ACTCCACGCACAAGATGGGTTTAATTGCATCATCAATGAAAGAAACTATG
GAGGATAATCTCAAAAAGCAGCAAGATTTCATGCTACAAACACAACAAAT
GCAGCTTGGGAGACAAATTGCAATGCAACATATGATGGCCAAGAAACAAA
TGTCAATTCAAATGGCTCGTCAACGAGAGATGTTCAATTGGATTGCAAGT
TTCACTGGTACTGTTTCGTTTTTTGCTGTTGTTGCagcAACAAAATCAAA
GAATCCAAAATTATTAGCTCCCATTCTCCCGCTTGGATTCATCACCGCTT
ACCAATGGGATATGGCACATGGCGACAAAATGCAAAGGATAAAACGAGAT
GCTGAATTCATTCTTGACGAAACTGATCGTACAGAACTACCTCATGGAGA
TCTTAACCTTCAATTGATCGACCAGTATCGAACGAAGAAGTAGATTCGAG
TTGATTAACAATTATGTGGATTCAGACAAATTAGACATTAAACCTTAGTA
CGGTTGCTTACCGAATCTTAACGTCATTTCGGGGTAATTTTCATAGGTTT
GGGGTAACTTTCATTTGGTGAAATTTTCTATGACTCAATTTCGGATAAAC
CCTatgaaaagtaataaaatcagtcatatgACTAACCAGGAATGATATGA
TATTTCGTGAAATTAGGATTAATACCCCTCGTATCATTTTGAAACACTTT
GAAATAGCCCT Run BLAST on NCBI protein sequence of TCONS_00053930-protein >TCONS_00053930-protein ID=TCONS_00053930-protein|Name=TCONS_00053930-protein|organism=Clytia hemisphaerica|type=polypeptide|length=142bp
MGLIASSMKETMEDNLKKQQDFMLQTQQMQLGRQIAMQHMMAKKQMSIQM
ARQREMFNWIASFTGTVSFFAVVAATKSKNPKLLAPILPLGFITAYQWDM
AHGDKMQRIKRDAEFILDETDRTELPHGDLNLQLIDQYRTKK Run BLAST on NCBI transcript from alignment at scaffold_237:221569..229954+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053930 ID=TCONS_00053930|Name=TCONS_00053930|organism=Clytia hemisphaerica|type=transcript|length=8386bp|location=Sequence derived from alignment at scaffold_237:221569..229954+ (Clytia hemisphaerica)
GGGGGGACGAGGTAGGTTGGGTCTTCTTTGTCAAAATCGTATCTgtatct
ttgcggctcttgttgcTTTGtcgcactttcgttttcaatttCTAAGAATT
TTAGGAATAATGCTATTTTCCAGAACAAAAAGCGCCCATTGAATCTTCAA
ATTATCGTTGTTCCGTAATATACGAATCAaaaccaaaacattcgaaactt
caaaacaaaaacaaagattgCAGAATTTCTTGCACTGATCAACTCAACTG
ACTGTCGCCTCTCGttcagaaagaaaaattaatataCCAGTCCAGTCAGT
ACTCCACGCACAAGATGGGTTTAATTGCATCATCAATGAAAGAAACTATG
GAGGATAATCTCAAAAAGCAGCAAGATTTCATGCTACAAACACAACAAAT
GCAGGTATTAATGATGTCAAAATTTACAGATTTCGCGGTATTTTATATGA
TTTTAacacctgtgacctgttgacctgtgacctgtgtttcgAACTGGACA
TTTTATTCCTAACCCTAAAGAAGGTGAGGCCGAATGCCTTCTTTATAGCA
CTTAGGGGCACCCGTACCCTGAGACCTAACTTAggcagcctagactaatg
ttaatttttctttcagaaaaaagactataaataaattgtttacctttatt
cctgcagcttcccaacatccaagctctcgaACAtaacaagccgaatgaaa
ttactttcaatttcccgtagaaattatgcgatgaaaaatccgggggtcga
agaatgaagatatttttatttccgaacaagttatctttgcttatagcgaa
atattacttttcaatatatttgctgaatataatgtttgattacaaaaata
ctttacactgtatttaaagtttgaaaaagtcgattctactaTTCTANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttaa
tataatgccaattatgcatgtaagtttttaattcatactttctttttgca
tatgttttgcatactttctaagggaatttcaccacggcaattcgaccacc
ataatttttgcatacaattcaatatggcggatggaaaggcgaaaaggtct
atcccgagatttttgcagtcgggcgttcaaaacaaaagcgtttttatttt
tccgcccacttacgaatttttctttataataggcatttaaaatatcGAAT
TTAAAAATAGtagtataaaaccttattttttaccgtatagtatttcttct
aaaacaaaaaaacaaaatacactagaaaaataaagaattNtaggatcccg
tagggatctTTGTAGGGCACCGGTACCGGTGGTAGGGTTGGGAGCCTTCT
TAATTAAtgaaggtctgtaaattacacgctataagtatttgtgaatgaca
gctgTCTTCTGTCTCTTGTTGGCGCAAGCAGTTAGGCATTGGGTTCAAGC
CTGGGTCGGAGACCagcagccagaatatcaaccaacctaaattttgtcat
tcaattcttgagactttgattttgaaggccttgtttatacgctaaagtaa
aaatgatTCCACACATGTAAATGGAttaggccgatgaaatttacatatga
gtttaccgttgtgaacttacccaaaaatagatgcggcatgatttcattat
tcattattcattattttcccaacNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNttattcattattttcccaacagcaccttatcc
accatttctgccaatcatgctctctcaaaataaaaaattttgcttcgctt
caacccttcgcatcttttgcgaatgaaaaataaagatcgattgctacagt
ggcgctagattttgcaaaaaactaaaatggcggtCAGGGCGGTTTGGCAG
ATATATGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTAAACATGcgtagagacgattttaacaaagataga
ggttgtagttgtaaagaaatatggaaataatgaaaaatttatgaattttg
aaaataatgaaattttcacgtgggtgctttttagagatgtgggcggccga
cggtaaactcatatataaatttcatcggccttagtgtttgaggtccagca
aaatttctgggaaatagcctatccggcggtgcacGGTTCTGTCTCCCCCt
cagatctttttcttgggaagttgatcttcaaattagtttttaagGTTGGC
TTGCTaggctcaaatttttttatctatggctcaaattttaggcaatttct
catagttttcgAAAATATTCCACCCGTCGCGCGTCGGGGAGAGAGCGCAG
ATCTGAAAagccgaagggctagataggcaactcaAAGCTTTctcgagcaa
aaaaaattgactttttaaatttcgtgccgatggataggatctagcatttt
aattgttttcagtgCGCAAGATCAAAagagtaggcggcaaacgctatttc
acatctttCAAATTGGTGAAATTGCATGATTTTAGTCAAGTGTCTAGCCC
CCATCAGGGGCTTTACAGGTCTGTGGAAGAGAAATGGAATGTCGCCCTTT
GAAGTACAGCTATTAGTGAGGTAGATAACTcaggacgacggacgaaaaat
gtaataggctagtgaaaatacgaaatctgattggttgaaatattCTGATT
GATTATTCTAGCTTTTCTAGCTTTAATTAAATTCagaaaatagcacaata
tttccaaaatgtttacaattattttaaaaataaaaggtCTGTAATTTACT
CAGTAAAGTTTCCCGCGTTTGCAGTTTCCCGCGTTTTAGCATTTTCCCGC
CACTGAGTTTCCCGCGTGTTCGTCAGCGCCCTCTGCGCCCATGGGCGGAA
CGGACCACCTTGGTCGTTCTGGGTTGTTCCGGGTCGTTCTGGGTCGTTCC
GGGTCGTTCCGGGTCATTCTGGGTTGCTCTGGCACGTTACGGGTCATTAC
TACTAGTTCCTACTTATACAAACGACCTGGTCAAATTTACTCTTGGAAGT
GTACAAAAAACATTCCTAAgtcatatttacaaaaaaatatgtcaaaactg
tTTCCTTTTAGTCCATTAACTTCAGTTTGGTAAAAGAATACAAAcacaaa
agtaaataaaaatagactTTATGACATCATGATTTCATTCAACTTGGAAT
AAATCCTCAATAtcaaaaataaggctaaaaagTACACactttatcaacat
tttactcattttcttgACGATGTTACTTTTCTTGTTTAATATGTTTTCTG
TAATGGACAGGGACCGCTAAACAATTTACAATGTTAAAAAAAGAACCTTG
CACCTAAAAATGGTCATTGGAAATTCAGTACACACAGTGaactttttatt
gtatttcttGCTTTGGCGTTCGTTTTTTTTTCGGGGGAAAaagcaataga
cgatatcggctttccgaattctccccaaatgattacccatgatgcattgt
gcaaaaaattcacggaaagtcaatatcatccgtgaattttttgcacaatg
catcatgggtaatcattcggggagaattcggaaagccaatatcgtctatt
gtttttttcccaaaaaaaaaacgaacgCCAAAGCaagaaaagtttgtttt
gatttaagtttgtattttaatgaccatccaggtcattcatttgagggcta
tgcaagtttccctccactggtGCAATTTACCCGATTTCACGGTACAGATT
TGATAAAGTAGATAAGTCTTATTATGAGAAGCAGATAAAATTCAGGGCAC
CGTGGTGCCTTTATGCCGTAGATTCGTTAGCTGAGATGAATGCTGATGCT
GAGATGATTTCAATTTTCTATTATTCTTTTCAAAGCTTTTTCTAGACACT
AATCAGGGCAAAATAATTAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNactaaaatgtaagacatacatgagtactaaaaggattttcgctaattt
ttgacatacccccacctatttttcgaaaatgttattttagtacacatgta
ctaaagttattttgagcaatttaacatagacaccacccattttttgccct
tttacggctttaaatttaccaaaatggggtcattgttacaaacctagtcg
aatttagtgcatcaatctgcaaaataatataagtttattactaaactgtg
ctgaaattgtacataaaaatatttttaaaaaattggaaaaattctgaaag
atttctgaagattttttcgaaaattcctgagaaaaaaaaatcaaattttt
tccaaaattgttaaaaaaatgccccattttggctgattctggctgatttt
agaacaaaatactaagatttttcaaaaatttctttaagggaccacccttt
ttggtattttagtacacatggtactaaaattatttttgaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCTGGGC
ACCGTGGTGCCTTTATGCTGTAATTTCGTTAGCTGAGATGAATGCTGATG
CTGAGATGATTTCAATTCTCTATTATTCTTTTCAAAGCTTTTTCTAGACA
CTAATCAGGGCAAAATAATTAAGTTAAATTTCTCATGAAAATGGTTGAAG
ACTGTTTGAAGAGAAAATAAATTATAACCCTGGTAAAAGATTTAAATGCT
ACATAGAAAGGCGTCAGACATATGACTATTGGCAAATATTactattgtca
aatattgttctCCAATATGCTGTTCTCTCCCTCGTACGGTTTAAGTAGAT
CTTAAGTCTGGAGTTTCTGAACCTTTAGGAAGTTTCTAAGTTCAACTGAG
TCATTTCTAGAGTTGACATTTTTATATGTGAAATTTGATGAGTCCCGAGT
GGGATTTGAACCCATACATGAAAAGTAACCTCGATTCAGAAACTCCGTAC
GCTACAATTACTCCACGAGGCCACGGCAATCAATTGAATTCACAAGCTAC
ttataatgtgtatttcaaagACCCATATATATTATCCTGTTGGCCCCCAT
CCTACCGGTCCTACCAGGGCCCTTTGTTTCCCTACAAATGCCACTGTCCC
AACCCTATTAGgactcgagctccaaccctgaccctattTGATCCTGACTG
ATAAAAAACGAATTTCACCTGTATGGATTGAAAAATTGATCTGGAAAATT
TGTTCTCTCGTTTGTGTTTGTTGCAAAGATTTGGAATAAGTGTGTATAGC
TGCTATATAAGTCTCGATCAGAAATCCTATCTTTCCTATTTTATCTATCT
TTGATAAATGGTTTACAAGGTTTAGTTTTTAAAGAAGATGTGAgatatca
tttgcttactcatcaatttttattcacaagctttatttcattggattgac
acgtatgtgtagcaagattagtcagaaagagagaaaaacatttttttgct
tatattagcataatataacaaaaggcagacactgcccttatatgaaatat
gtgtctgatatgaaaagggaacacttatgtaaaactaaaatctttaaATG
AACTAACGggttttttatcaaaactttccCCTTTTTTCCACAGCTTGGGA
GACAAATTGCAATGCAACATATGATGGCCAAGAAACAAATGTCAATTCAA
ATGGCTCGTCAACGAGAGATGTTCAATTGGATTGCAAGTTTCACTGGTAC
TGTTTCGTTTTTTGCTGTTGTTGCGTAAgtagaagtaaaaaaaaataacc
TTGTGCACTCACTTCAGTTCAACTAAAATGTCTGTCTGTACCCTAAAAAC
TTTGTGGCAGACTGaggacttcaaaaatggtcagatttggctgagattta
caaaaatttcaagaaGTTGCACCATAAGAGTcgatttttcgcccaaattt
actcaaagtCGGATAAGTTTTCTCTTCACTGTATGGGTCCAATTTTGAGA
CCCCATTTTTTAGCTCTCAGGCTAGTGTATCAGGCTATTCcaccagaaat
agtctgtaccaatgaagtataagcccgaagggctagaagtcaatctcctt
ggtaggatttgaagccaacaaatcctaccaaagttgcgcggccttgagcg
gctcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatcaatc
gtaaacaaaggaattgctagattcaatctgtcgtcaaaaatgcggcgcat
tttttaaggcttcactttttcttgcctgagaaaggttagagatagaactc
tagcccttcgggctttaaactcaatggtctgtaccccctatgttgaggag
ttGTGAAGTCCAGGGTGGTCTAGAGAATTAAAAAATCCATAGGGTctggt
ttttgtttttttttgtcagtaaaatgaggctgaaaatccagggtggtcag
taacaCAAGGTacagaaaatgggaaaaaaatctatgaggcctgaaaaatt
gaaataagaaATTCCAGAAAAACCTTTCAGTAATAATCTAgctttgatat
tttatttttattttttagagcAACAAAATCAAAGAATCCAAAATTATTAG
CTCCCATTCTCCCGCTTGGATTCATCACCGCTTACCAATGGGATATGGCA
CATGGCGACAAAATGCAAAGGATAAAACGTTAGTAAAAAAGTTCCATGTA
AAGTCAAAAATACCCTCatgaaattgtttttcaatGTATTTAATCGATAG
CCAATATCTCTTGTGTTTATTGTCTATCTATCtgtgtactcttaggttcc
aaataaattcttgttaatttttcgaaaatttttcaaatccccGCCCGGAC
CTGATTAGGactccccgtttattaattttaaggATATTTTCAGCAGTTGA
AGAGAAGGTCCCATATTTtactctaaatagcctgattttagcctatattt
accttatttttgggttttcagaagaaCAATTTccaacacccccccccccc
ccaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNccccccccccccggcaattaggattta
ttaaaatttcgatgttcaaaaatgttctttattaaCAAAAACACCTAATG
AATTACCAGCATTGCGATCTTTGtgattgatgatttttttttcaaattat
cagAAAAATCTTTGTGCTTATTTGTCTCTTTGCTGGAATATTTgctaaaa
gtcatattttttcTCATTAGGAGATGCTGAATTCATTCTTGACGAAACTG
ATCGTACAGAACTACCTCATGGAGATCTTAACCTTCAATTGATCGACCAG
TATCGAACGAAGAAGTAGATTCGAGTTGATTAACAATTATGTGGATTCAG
ACAAATTAGACATTAAACCTTAGTACGGTTGCTTACCGAATCTTAACGTC
ATTTCGGGGTAATTTTCATAGGTTTGGGGTAACTTTCATTTGGTGAAATT
TTCTATGACTCAATTTCGGATAAACCCTatgaaaagtaataaaatcagtc
atatgACTAACCAGGAATGATATGATATTTCGTGAAATTAGGATTAATAC
CCCTCGTATCATTTTGAAACACTTTGAAATAGCCCT Coding sequence (CDS) from alignment at scaffold_237:221569..229954+ >TCONS_00053930 ID=TCONS_00053930|Name=TCONS_00053930|organism=Clytia hemisphaerica|type=CDS|length=1716bp|location=Sequence derived from alignment at scaffold_237:221569..229954+ (Clytia hemisphaerica)
ATGGGTTTAATTGCATCATCAATGAAAGAAACTATGGAGGATAATCTCAA
AAAGCAGCAAGATTTCATGCTACAAACACAACAAATGCAGCTTGGGAGAC
AAATTGCAATGCAACATATGATGGCCAAGAAACAAATGTCAATTCAAATG
GCTCGTCAACGAGAGATGTTCAATTGGATTGCAAGTTTCACTGGTACTGT
TTCGTTTTTTGCTGTTGTTGCagcAACAAAATCAAAGAATCCAAAATTAT
TAGCTCCCATTCTCCCGCTTGGATTCATCACCGCTTACCAATGGGATATG
GCACATGGCGACAAAATGCAAAGGATAAAACGAGATGCTGAATTCATTCT
TGACGAAACTGATCGTACAGAACTACCTCATGGAGATCTTAACCTTCAAT
TGATCGACCAGTATCGAACGAAGAAGTAGATGGGTTTAATTGCATCATCA
ATGAAAGAAACTATGGAGGATAATCTCAAAAAGCAGCAAGATTTCATGCT
ACAAACACAACAAATGCAGCTTGGGAGACAAATTGCAATGCAACATATGA
TGGCCAAGAAACAAATGTCAATTCAAATGGCTCGTCAACGAGAGATGTTC
AATTGGATTGCAAGTTTCACTGGTACTGTTTCGTTTTTTGCTGTTGTTGC
agcAACAAAATCAAAGAATCCAAAATTATTAGCTCCCATTCTCCCGCTTG
GATTCATCACCGCTTACCAATGGGATATGGCACATGGCGACAAAATGCAA
AGGATAAAACGAGATGCTGAATTCATTCTTGACGAAACTGATCGTACAGA
ACTACCTCATGGAGATCTTAACCTTCAATTGATCGACCAGTATCGAACGA
AGAAGTAGATGGGTTTAATTGCATCATCAATGAAAGAAACTATGGAGGAT
AATCTCAAAAAGCAGCAAGATTTCATGCTACAAACACAACAAATGCAGCT
TGGGAGACAAATTGCAATGCAACATATGATGGCCAAGAAACAAATGTCAA
TTCAAATGGCTCGTCAACGAGAGATGTTCAATTGGATTGCAAGTTTCACT
GGTACTGTTTCGTTTTTTGCTGTTGTTGCagcAACAAAATCAAAGAATCC
AAAATTATTAGCTCCCATTCTCCCGCTTGGATTCATCACCGCTTACCAAT
GGGATATGGCACATGGCGACAAAATGCAAAGGATAAAACGAGATGCTGAA
TTCATTCTTGACGAAACTGATCGTACAGAACTACCTCATGGAGATCTTAA
CCTTCAATTGATCGACCAGTATCGAACGAAGAAGTAGATGGGTTTAATTG
CATCATCAATGAAAGAAACTATGGAGGATAATCTCAAAAAGCAGCAAGAT
TTCATGCTACAAACACAACAAATGCAGCTTGGGAGACAAATTGCAATGCA
ACATATGATGGCCAAGAAACAAATGTCAATTCAAATGGCTCGTCAACGAG
AGATGTTCAATTGGATTGCAAGTTTCACTGGTACTGTTTCGTTTTTTGCT
GTTGTTGCagcAACAAAATCAAAGAATCCAAAATTATTAGCTCCCATTCT
CCCGCTTGGATTCATCACCGCTTACCAATGGGATATGGCACATGGCGACA
AAATGCAAAGGATAAAACGAGATGCTGAATTCATTCTTGACGAAACTGAT
CGTACAGAACTACCTCATGGAGATCTTAACCTTCAATTGATCGACCAGTA
TCGAACGAAGAAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053930-exon-scaffold_237-1491911889:221569..221972 | TCONS_00053930-exon-scaffold_237-1491911889:221569..221972 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1510915933:221569..221972 | TCONS_00053930-exon-scaffold_237-1510915933:221569..221972 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1575043694:221569..221972 | TCONS_00053930-exon-scaffold_237-1575043694:221569..221972 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1491911889:227812..227942 | TCONS_00053930-exon-scaffold_237-1491911889:227812..227942 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1510915933:227812..227942 | TCONS_00053930-exon-scaffold_237-1510915933:227812..227942 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1575043694:227812..227942 | TCONS_00053930-exon-scaffold_237-1575043694:227812..227942 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1491911889:228887..228996 | TCONS_00053930-exon-scaffold_237-1491911889:228887..228996 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1510915933:228887..228996 | TCONS_00053930-exon-scaffold_237-1510915933:228887..228996 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1575043694:228887..228996 | TCONS_00053930-exon-scaffold_237-1575043694:228887..228996 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1491911889:229589..229954 | TCONS_00053930-exon-scaffold_237-1491911889:229589..229954 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1510915933:229589..229954 | TCONS_00053930-exon-scaffold_237-1510915933:229589..229954 | Clytia hemisphaerica | exon |
| TCONS_00053930-exon-scaffold_237-1575043694:229589..229954 | TCONS_00053930-exon-scaffold_237-1575043694:229589..229954 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_237 | supercontig | scaffold_237:221569..229954 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019319 | DUF2368 |
Blast
BLAST of TCONS_00053930 vs. Swiss-Prot (Human)
Match: PLRKT (Plasminogen receptor (KT) OS=Homo sapiens GN=PLGRKT PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-20 Identity = 52/140 (37.14%), Postives = 85/140 (60.71%), Query Frame = 3
Query: 315 MGLIASSMKETMEDNLKKXXXXXXXXXXXXXGRQIAMQHMMAKKQMSIQMARQREMFNWIASFTGTVSFFAVVAATKSKNPKLLAPILPLGFITAYQWDMAHGDKMQRIKRDAEFILD-ETDRTELPHGDLNLQLIDQYR 731
MG I S ++M +++K Q++FML ++QL RQ+ MQ M ++QM++Q+A RE + +F G + A K K P L PI+PL FI YQ+D+ +G ++R+K +AE IL+ E + +LP G + + I++ R
Sbjct: 1 MGFIFS---KSMNESMKNQKEFMLMNARLQLERQLIMQSEMRERQMAMQIAWSREFLKYFGTFFGLAAISLTAGAIKKKKPAFLVPIVPLSFILTYQYDLGYGTLLERMKGEAEDILETEKSKLQLPRGMITFESIEKAR 137
The following BLAST results are available for this feature:
|
