TCONS_00054128 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054128
Unique NameTCONS_00054128
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054128 ID=TCONS_00054128|Name=TCONS_00054128|organism=Clytia hemisphaerica|type=transcript|length=157bp
tcaagttgttgttgttgttgttgttgttgttgtttttgttgttgttgttg
agtgaTATTCCACGTTTGACAGGAATATGTCAACCGACTGCGCACCATTG
TATTTAGGAGATATACCCTATATCTTTCGATTGTGCAGTTTTTTACTCAT
TCGGTTG
Run BLAST on NCBI

transcript from alignment at scaffold_24:7817..7973

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054128 ID=TCONS_00054128|Name=TCONS_00054128|organism=Clytia hemisphaerica|type=transcript|length=157bp|location=Sequence derived from alignment at scaffold_24:7817..7973 (Clytia hemisphaerica)
CAACCGAATGAGTAAAAAACTGCACAATCGAAAGATATAGGGTATATCTC
CTAAATACAATGGTGCGCAGTCGGTTGACATATTCCTGTCAAACGTGGAA
TAtcactcaacaacaacaacaaaaacaacaacaacaacaacaacaacaac
aacttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034151XLOC_034151Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054128-exon-scaffold_24-1491911889:7817..7973TCONS_00054128-exon-scaffold_24-1491911889:7817..7973Clytia hemisphaericaexon
TCONS_00054128-exon-scaffold_24-1510915933:7817..7973TCONS_00054128-exon-scaffold_24-1510915933:7817..7973Clytia hemisphaericaexon
TCONS_00054128-exon-scaffold_24-1575043694:7817..7973TCONS_00054128-exon-scaffold_24-1575043694:7817..7973Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:7817..7973 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054128 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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