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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054133 ID=TCONS_00054133|Name=TCONS_00054133|organism=Clytia hemisphaerica|type=transcript|length=893bp
atttttgtaaaGTGTTACCTATAGGGGTAAGTACAAACTTTTATctaaat
catcaaaataatgtgAGGGAAAAAACTGGCTAAAACAAAGTTTTCTTACC
CTTCCATCCTGCATCAATCAAAAGCTGAAAGGGCATGCTTCGAACAGTTT
TCTTCCAGTCGGCTTAAGATAGAATAAGCTTTCGTAGTAAAATCGACTTT
CAATTTTACAGTCAAACCCGACTGCGTAACTGATTAAAATTCTAGTCTAG
AAAAAAGATAGAACCTACTGAGCTGGATGGGCGTCATAGAGGCGCCAACA
GGCGCCAGCGAATCAACTGGCCGAAGATAGACCTGAATCAACGGCCGAAG
ATcacctagtctgaatcgcagacctctacaaaaccccatgtactataagg
agcacgaatccgttagtggatgccagcagcctaaagATCACCTGAATCAA
CCTGATCAACAGCCGAAGACCTGATTTCTGTGATTTAACGGCCGACCTGA
CTTAGCAAGTCACCGACCGAATATCTGATAGATAAGTTAGGGTCAGTTAA
AGTAGCTTGAACCACTCATCATCAAGGCATTAATTGGGAAAAAAAATCTG
CGGGGGAGTAGGATTTTTTGTCCTTAgttcactgacctttataaaggTCA
GTTTTAGTTACCCCCTCCGGGCCCTTAAGCCCTTTAAGCAGCGGGTAGGA
ATTACGTAATCGAAACCTCATCTCGTATCATATTTCTGAAACTCTCTAAA
ACTATCAAATagtgttacacgtttttttttttataaggaaccttaacttt
gctctgagcctggagttccttatttttacaaagaatttcagtctcaaagt
tccttatcgagttccttactacataggaaattttgaacttttt Run BLAST on NCBI transcript from alignment at scaffold_24:105239..106131 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054133 ID=TCONS_00054133|Name=TCONS_00054133|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at scaffold_24:105239..106131 (Clytia hemisphaerica)
aaaaagttcaaaatttcctatgtagtaaggaactcgataaggaactttga
gactgaaattctttgtaaaaataaggaactccaggctcagagcaaagtta
aggttccttataaaaaaaaaaacgtgtaacactATTTGATAGTTTTAGAG
AGTTTCAGAAATATGATACGAGATGAGGTTTCGATTACGTAATTCCTACC
CGCTGCTTAAAGGGCTTAAGGGCCCGGAGGGGGTAACTAAAACTGAcctt
tataaaggtcagtgaacTAAGGACAAAAAATCCTACTCCCCCGCAGATTT
TTTTTCCCAATTAATGCCTTGATGATGAGTGGTTCAAGCTACTTTAACTG
ACCCTAACTTATCTATCAGATATTCGGTCGGTGACTTGCTAAGTCAGGTC
GGCCGTTAAATCACAGAAATCAGGTCTTCGGCTGTTGATCAGGTTGATTC
AGGTGATctttaggctgctggcatccactaacggattcgtgctccttata
gtacatggggttttgtagaggtctgcgattcagactaggtgATCTTCGGC
CGTTGATTCAGGTCTATCTTCGGCCAGTTGATTCGCTGGCGCCTGTTGGC
GCCTCTATGACGCCCATCCAGCTCAGTAGGTTCTATCTTTTTTCTAGACT
AGAATTTTAATCAGTTACGCAGTCGGGTTTGACTGTAAAATTGAAAGTCG
ATTTTACTACGAAAGCTTATTCTATCTTAAGCCGACTGGAAGAAAACTGT
TCGAAGCATGCCCTTTCAGCTTTTGATTGATGCAGGATGGAAGGGTAAGA
AAACTTTGTTTTAGCCAGTTTTTTCCCTcacattattttgatgatttagA
TAAAAGTTTGTACTTACCCCTATAGGTAACACtttacaaaaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054133-exon-scaffold_24-1491911889:105239..106131 | TCONS_00054133-exon-scaffold_24-1491911889:105239..106131 | Clytia hemisphaerica | exon |
| TCONS_00054133-exon-scaffold_24-1510915933:105239..106131 | TCONS_00054133-exon-scaffold_24-1510915933:105239..106131 | Clytia hemisphaerica | exon |
| TCONS_00054133-exon-scaffold_24-1575043694:105239..106131 | TCONS_00054133-exon-scaffold_24-1575043694:105239..106131 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_24 | supercontig | scaffold_24:105239..106131 . |
Blast
The following BLAST results are available for this feature:
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