TCONS_00054143 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054143
Unique NameTCONS_00054143
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length897

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054143 ID=TCONS_00054143|Name=TCONS_00054143|organism=Clytia hemisphaerica|type=transcript|length=897bp
AAAAATGGCAGGAAAAGCATTGTGGGTAATTTCCCAACGTTACTGGGGTG
TCAGCTTTGTCAGTCATGAACTGTTGTTGGCAATTCTTACCATACTCTTT
TTCTATCACAACCAGAACATTAGGGGGAAAAAACATACCTGTAACAGTCG
CATCATACCAATTTTCTCACCTTCATGGGACGAGAAAAGAGAAATTCCAA
ATATCCCTGATCCATATACTGCTGATCAACAGACGACAATTGAtagtaaa
acaaaagaaatggtGGTTGAAGTTTTAATAGGTGTAAGGAAGACGAGAGA
TATTGTTAGCACAATAAAAGAAATGTGTCTCCACAGAGCATTTGTGGAAC
AAGATGTTTTGAGAAAACCCTCCCCAAGAGATTGTCTTGATGATGATGAA
GTCGCTCACAAAACGATTTTGGAATACAATCTAAATGCATTTGGACTTGT
TGTTTTTGAAACAGCAAGGGATGGTGATTGCTGTTTTCGTAGTATTTTAC
ATCAGCTACATAACGTTTTTCAGTTAGACGACAACAAGGAGCTCGAAAAC
TATCTCACTGGTCTAAGCTTGGGTCAATCGATTGAAGATGACATCTCCAC
GTTGAGGTTAGTAAGTTTTTCGAATCTTATAAATATACTGCTTGATTATC
ACACAACTCTTTTTCTGACGCATATCGTCTCTTCTGCAATTCTCTTTTAA
ACAGACTGGACCCAACCATAGTGGGTCATCCCACTAAATTCATTTTTACa
tattaaaaataaagattACTTTACACTCTACTTTCAATTTCTGTCCTAAT
TTTCCTTTGTTGAGAAATAAGTcttattttggtgaatttcATTCTACGAG
ATTGAGTCTCGTGATATTTAATAGCAGCTATTTTTTTTACTCGCTTC
Run BLAST on NCBI

transcript from alignment at scaffold_241:35002..49324+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054143 ID=TCONS_00054143|Name=TCONS_00054143|organism=Clytia hemisphaerica|type=transcript|length=14323bp|location=Sequence derived from alignment at scaffold_241:35002..49324+ (Clytia hemisphaerica)
AAAAATGGCAGGAAAAGCATTGTGGGTAATTTCCCAACGTTACTGGGGTA GCTATTTGTGTTATTAGTTGTTCTATATAATATGAACATATTGTAAGagt tatataataatataaacATATTATATATTGCACATAATGTTATTAAGGAA GTCACTTTGTTCCCGgcattttgttcttttctttaaatgtTGATATCATG ttgatatttgagaaaaatattgacagaatcataATACATGATGTCTCACG agacaaaaacataaaaaatattcattatacCGAAAGTGatgtgtgaatgg atataaaaagaaaccaataaaaTGTTAAGTTTGAACAACTCGGAATAAAT CTCGAAAAGACTTATCATACTCAATGTGATGTTGGAAGTCCAAATAGATG TAAATTGATTCAAACTAGAGTTGGTCAGAgctgtttttgttattttctcc CATTTTTGAGGGGTCCATGTAggggtccataatggggtccatattggtgG TCCCCGGTTTGTCTGTTGTCCTCTTTACCCCCTTTccttttcactgtttt ttcttcattattaaCTGAGGGTGGTGTCCGAGTCAGGTATTATCTTAATT CAATTCGATTTGCATAGAGAAACCATCCAAATTACGACCCTGATGCTGCT GTTTTCGGGTGCTCCAAAGTAGAAATTTTAGTACCCGAAAGTCCCATAGT TAAGCAGTCTGTGATAAACAGAAAACATAATTTTATCCCTTTTTCCAggt ataccgggtgacccacgaaaaactTCGGACAGTTTTCGGCGTctcgaggc cgaacaaatgtctcaaagtgcttgaaattttaatatgtagaaagtagata ttctaacttaaaatttgagctattactttttaaaattactTCTTAAAAat tacttatgagcttttaaagtcaaaattcacttttcggaaagagcgaaata acgtcaaaaaagaggtataaaattgttttattatcaatcaatcaagcaaG GTCGTTAAATCGTTAGAAAAGAGCATGTTAGATATTGTTATtcaatttta aacctttttttagattctttacttACACAAAATTTATTAACAAGTTATTC GTTCAGAAAAGAACCACCACCATACACTTTCTAGCATATTCCAGGCAAAC CCACACTCTCTGTTCTTTCATAAGACTCgacattttcataaagaaggcaa attttgcctatttgcaaaatattttttacaaaaatatttacaataaattt atataaatctacttcgttgttaatttattattttacaaactttaaTTACC TACAACACTAATTAACAAGGTCGTAAAACATCAGCACACTCGAAAAACAC AATGTTAAAGAGaaagaaaacaattataatttgatacctcatttttgacg tgtttttgcactttcctataattgaattttgactttaaaagctcacaAAT GAAGAAccactgaaccaaatttaaaaagtaatagctcaaagtttaagtta gaGCATTCTTAAGtttatattacttttatttcagACCCTACCCAACGAAA ACagtttttcgtgggtcacccggtatatataTGCTGACCAAGGATAAGCA GACGCTGTCGTGCAGAAAAAGTCATCAATCTGTAGAAAATGCCTGGTGGA AATACCCCCAACGCCCTTCCAGTGATTTCGAGTGCTGGTTTTCAGGTGTA TTcccaaaaatagaaattttactACCCAAAAACCATAGTTTGACACCCAA AATTAGGCTAGGTGGAAATACTTCATTTACCATTTGATGTGTGTGGATAA CGATCCTGCTCAAAATTTCTTGCTGTGTCGTGTGTCAACCAGATAACCAC TATcacaaaccaacaaaaaaccTTTTTGGAAAGTGCAAAAGTGCCttctt ttttagatttcgaCCTTTTAGCATTGCTATACAAATAATCATGTGCGGGT TATTTCAGAAATCTTGTTCAATGATATTTCCCACGAGCTTTCCCTAAAAC AGGggttttttgtttattctttaATATGAGGAgcaattttttacttttaa tcatTTTGTTCTAAGACATGCAACTTTGCGTTGGCCatcaaaaaagttca tttttgaaatttctaaatgcCAATTTATTTCGATAACTGGCAAGATTTCC CCTGTTTAAAACGTTAAATTATTGTTTTAAGGGACAATGAAAAGTCGTTT CATCATAAGACATCTTGGAATGTCAATTTTTGCCACCCCTCAAAATAGGA CCCCCCTCTAACCTTTTGTAACTTTAATATTTTGAGTCCAAATTTTGTAT GAGAGGTTCCCTCAACAAAAGATTTAGGGGCTtggggtcaattttttttg ccacaGACCCCTTATTTGAACGTTCTGGtatgtaaaataccaaccagaca GGTGGCCGaccaatttttttgcaaacaatCTTGTATTATCGTTTACTacc tttggtcaaaatttcaagttcctAGCATTTGTAGAAGGCCcctccccccc ccaaaaaaaaaaatgcttcgccttttttaccagtttttgcacaaaaacat tattgataaaaatacccacgatcaagcatgattcaattgtcaatgaaact gatttttgcacCCGAAACTTTTTGAGCTGTAGTTGACATTTTTACattaa attttgcacactgatgcaaaatgccAATACCTAAATAATTTGACAGACct tgatttaaaaaatatattttccagcCGATAACATCAGAAAtatgtttttt ctgaatttttgcacaaagatgtgtattggcaatgcccaaaacatgactga gtctaatttttgaagaaaattcctTTCTGGTCGAAAACGCCGGAAAGATG CCGTAAATCGCTGTATTTGCAgatttcattggatttttttgttaaatttc ttttaatttttcacacaaaaacatcattgataacaatgcccatgatcaag catgattcaattgtcaataaaactaatttttgcacCTGGAACAGACAATT TTTGCTGGAAAACAGTTTTTCTTGAATCTTTCGAGgctgaattattttag tttagttgatattttttcatgaaattctgCGCACTGATTTATAACAGCAA TATCCCGGAAAACCGGTTCTTTGGTAGTTTCTCgaaattttatcattagt tttttctatttttttttgcacaaagatgtgtattagAATGTCCAAAATAA CCTAGAGaccaatttcaatttctttgttttttttcattttttactctcat tttctttttccctactccccttccctcttccccGTCAACAATCAATGAAG AAATTTAATATGCTATGCAGTTTCGCTAACGCtaaattttctgactgatt gttgtcatttttctccttttttctatccaactttcatcatcaggtggGTC CAATCAGCATCCAGCTTGTTATGTTTTATTTCTGCAAAATATTACCTCtc ttaaaaaattctttctcCCAGGTTCTCCTTTATTAAAATGTTCAAGGCTT TGCCTTTATGATTCTTGTCTAAAAAATCAGTTCGTTAAAGTTTCatgaca atattttcaaaactgatTTTTTGGAACAATACTAGGTAGTCCCCAGAGCG TGACCTTGCTGGGAGTTTTTAATGGCTAGGGAAGAATTTTGGTAAGGGTT ACGTAGTCCCTTTTCCCCTGACAACTCTTACTTAGGGTGGGGTGGTGGTT TAAGGGCTCGTTTTGTACGTGACCCCTTTTATGATTGATCTTCTTTTAAT ACTTTCACGTTTTCAGACCTTCAAAGTGAGAAAATCAACTGTTCCAAGTA ATGAAGAGCTTTCTCACTTTAACGGAATAACTTTTTGCAGGAATAAAGTT TCAtgacaatattttcaatttgGGTGTTAAACGTAAAATTAAATCGCATG AAACACAAAAAATCTTCCTTTTGGAAATTTAGCTCctaaaattcttattt tgagGCTCAATTAGCCTATTTTAATTTGGAGCGAAAATCAATTGGCCCTT CatcacaaaatcaaaaaccacaaaaatgtcttcctttaaggtagtcgaCT AAGTAAGTAATTTTGTGAAAACAGTCAAAGGAAACTCAAAGGCTCCTTTT TTGATAGCTGTCTAACCAAAgttaggggagggcgccactacTTCTCCcag gattgctccacttacccccTGATCCTTCTCTTTATTGCTGAGCATTAGGT AGAAAGGCTTTCCAGTACCATTTTTGCAAGCCAGGGATCAGACCCATTAC ATTGCAAATATTGTTGACTAAACTATGTTTAAATTTAtttatagaaatag aaaacatagaaaaatgaTGTTGTCAATTAGCTTGTTGTTTATTTTCTCGA TTGCAAAATGTATTACATCTGTAGTAATTGGAGTTGAATTCCAAAACGTT CTGGATGATATTGTTAAGAAATTCAATGAAGATCCAAATAACCCACGATA TCAACAAACCTTTTGTTTAACAAGTTCAGGATACAGCAAACCGATTCACA TCTTTATTTGGTCACCTCAAGAACAGCATTGTGGTTTTGAACTTAGGTGC TTCCAGCACAATTCTAACTTTCAGCCTTATCAACTAACAACTAATGTTGT AAAACGAAACTGATCGAATCCTCGTTTGCTATTCTGTGTCAGGAACAATA TACTTTTGGTTCAACAGATTTACCAATGCAATGGAGATAAGAAAGTTTTG CATTGttggattaaaaaatttcaaagacatTTCAAATGTCTCTCCCATGC ACGGATTGagcttttgtttgaaatgatcAGCAAACGAAATAACTTCCAAC AAGTATCGCAAATTCTTGCAAACCTTAGAATGAGGCACTACCATAGTTTT CAAGAAGAAGAGGCCCTAAGTAGTGTAGTTACAAGCTTGCCTAGTGCTGC AAAACTTGAAATACTattattggagtttttttaaacaaatggaAAGATGT ATTTGAATTTCCTGTCAATGAAGTCAAGGGAAGTGTAttgattttgattg aaaaagttGGGGCCTTTAGAACTTTGGATGGTAAATTCGTCAAGTCGGAC ATGAAACTCTGTATTGTTATGTATGAGTCAAGCGCCATAATTTCATGGAA ATTAACGGATTCAACATGTCACAATGAATTGGAAAGTGTATTGGATCATC TATCTCAGAAATGTGGTGATTTGGAATATATATGTACTGACAACTGTTGT CATTCCAGTctatatcaaaatttttttcccaccAAAATGGTTAAATTGGA TTCATTCCACGCCGTCAAAAGGGTTACTCAGCATGTTCCNTAGGTTAAAT TGGATTTATTCTACGCCGTCAAAAGGGTTACTCAACACGTTCCAAACCAG AAAAAGTGTATAAAAGCAAgaaattttgtgaataattctgGGTTAATATT CAGACAAAATAATGATATAGGTTCCATTAGGACAAAAGCAACTCCTGAGC CAAGCATCATCATTAGAAATTTGGAAACCTTTCTTACACTGCACAATTCC TTTTTTGTCAGAGCTTCCATCATAAAAATCTCgaagaaataaacaaagaa atttaaaattaaaaaaaaaatataatcaaagGTTGTCTCTCCGGTATTGG ACCTGTTCATGGTACagagaacaatgaaaatttaCCCAGACTACTCAATC GGAGCTTATTAAGAGGTTtgtctgatttttttcatttctgtNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttttgtattttgaccagtt atgtcttatgtgtttcattattgtttcaatgttcactgattagtttgata actaggtaggtccataaaagtatcgcttgttgctgctatttttgtttttg ttcatgAATATGTTTTAATACTGCCAAACAGTTTTCGAAAActgtttaac aaaaaaatattttcccaagcTGTAGAATCATGTTGGGGTCTCCtattttt gtaataaaatattcTATTCAACAACATTAATTATACCACATGATTTTACC CTAGTCAAATATTGAGATAATACAACGTACTAAGATATTTTTCTATTGAA AGGGGTGCTAAAAGAGAGGTACCCAAATTTTAGAAATGATACTACTTGAG CTAAAAGCAGCATTCACTCTACTTTGGATAATTGTTAACGACTTAAAAGT AGaatctatttatttcaattatggaaaacaatggaaattgaGTGTTTGTA AAAAAGACATTATCTCGAAAGTAGAGTGAACACACTATGCTTTAGTGTTT AAAgtgtttaattttcaaaaattttccctttcTGAGTCAACCAAGGTGGC CTCttaagaaatgtttttgaactttttctttttgttcgcTTATGTTATGG TATAATTTTGAACAAGATTATGTCATTTAAAACTCATTATTTCACCGcca tatgaaaaaaaaacaattaaattcaGAGAAAATCAGCCTTACTTTGCCCA GAAAACTCGTGGAAACTTGTTCATTAATTCCAGTCTGAACCTTGACAATT CTTCAGACTTGACAATTCTTCAACAactcaaaatttctaaatctttACTC TCACTTCGCTCCCAATAATTCCACTACATAAATTAACATTGTCACACAAG ATGGGAAATAGTCCCACTGCACAACTGCTTTATAGGAAAGTATAGAGAGG GGAATGTCTTGAAATCCTGTAATATTGTCTGATTGGGCTCTTCTCAAAAC CTTTTTAGCTTCTCCAATattctttcttatttttgaccatttacatAAGA TTCGAATTGTATTAAAGGACTTTGATCCAACTGATAAATCAAAAGACGAT CTAGATTGTCATTATGTCAAATAAAACCTTTTGAAAATTGATCAAAAGCT TAAAAAGGTcagtttttctccaaaaattctgttttttaCCTCATTTCTGC ACAGATTTTTTACTGCTAATTAGCCTGTTTGTCGATTGGAGGGCTGTCCG AACCCTGAGCTTGCATATGAGACATTTCATCCGTGATTTATGACCAGCTT CAAACCCAACTTAGCTATATTTTTTGACCTAATTTTCTACAAATACTCCC CATAACTAACCCTATTGAATACTGTTGCAAAGACTCTATGTATTTTACCC TTTTGATGACATTGGAGGGCTTTCTGTAGCAGACCCAGGCAATTTTTTAG GCCGAAATGTCAtagtttaagaaaaaatttaagcACCTCATATCACAAAG ACTATGCATTTGTCCATAGATAGAGATTTTTTGGGgatcagtggcgttgt ggcaggggggccaggggggccatgcccccccccctgcgTAGCTTTTTTGA AGGGCAAGAAGAGCAAGGGGTgctaaaagagatttttttaaacgccccaa tcttaaaaatcatatttatgtgccttaaattgcgcccagggccaatttta atataataataattttaagataatttttttttcgcgcgcttcgctcgcaa tacagttaattggtaacttctttgcaatctagctaatttataaattttta tataatatagcattattaaatgaaaatttaactgcgccccaagaccaata tgctgacaacaatattgaaatcataaaatatcaatttttttactcgcttc gctcgcataacacattgtttctttaagtttcttttcactctagcaagtgt caaatttgtctatttttttttagtgatttagggtaacTTGgcagttgatt taaaaaaattttctagtcggccccaaccatggtggggcctgtttctccat tttccattcatcaaagataaatctacTCTTCTTCACTAAATATTACCTtc tcattatgcctaggcatgaatttagtaaaagtttagaaaatggtGGGTGG AGACACCACTTCGGAAAATTGGAGGGGGGTGCCATTTAtaagaaattgac tttggctCCTCNtttagtaaaagtttagaaaatggtGGGTGGAGACACCA CTTCGGAAAATTGGAGGGGGGTGCCATTTAtaagaaattgactttggctC CTCCAGAAAaattcccacaacgccactgttgGGGATGTAAAATAGGCcca ctggagaaaaaaattctggTGTTGCCTTTAAAAAAACATACCATCTTGAA AATGGATGACATTTTTGGGTTGGGAATACCCTTTTGCCGAGCCATTTCTG GGCCGAGGGGGGtgataataatttcaaaatttcgattttagtgaaatatt ccaCCCATTAGACAAACTCATCAAGAAATCAAGCACTAAAAGTTTGTTGG GTAACCTCAATTTTGTTATGAAGTTGCACTTGCtctaatttttcaacttt ttggcCTCTCTTCCAGGGGCCCTatcaaattttcaggaaatttttgGTAA CCcacttttggtttttctgattCCCACTCCCAGCATAAAGTTCTAATGAA TTGAAAAGAAACAGACCTTCTATTCACTTCCAAAGTTTCTTCCCcacaga aattaaaattttttggcacaaaatttcgctcaaacattcaaaattcaatg agTCATATCTCAAAAACCGCTTGAGATATGACGCTTTTCAGGACAGTCTT TTCTTGccaaaagggtcaaaatttaagCAAAATCTGAGACATCAAGGTAT CGCACCTTGAGGGAATTTGAAGATTTATTTAAACAATGGCTCTTAATTAT TTTAGCAAAGGAATACAAAACCATTTTCTTAGTAGCAAGACTGAAAAACT AACAATgactcttattaaaaaataaattgtacacaaaatggtaaaatatg AAGCTATCTAATTGTGATTAAAATTGTATGTTAAGGATCTTGATATCAAT TTGATAGCTTcatattttaccattttttgtacaatttatattttttaata agagtcattgttattttttcaaagattgggcttttccagaaaaaatctgt tcatggggggtggaggatagattatttttttcatgaattacccctggaca cgggttatacccctggacaaacatcaaatcaaccccgtggacacataaat ttacccctggacattggaatttaccccctggacattgcaactttttggta ttttttcaataccccagGACAATTCagcctccaccccccatgaacggatt tttttctggaagagcccattgctgGAAAACTTGTACTTCTTGTGTATTTG TTTCTCTGATGACCTGAAAGATATTGATTACTTATTGTAATTTATTGTAA ACTAGTTAAATGACAATATGGTTGAGAATTTCAAGAAATGCTGGAANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATAATTCATAAT TATTtaataaataatgttttaataTCGCAATTTCTGGCTtcataaaatat attttgctcTTGTTCAATACAAAGTACAATACAAATGTCTTCATATCATG AAAGCAGTTACATTCAATAAACCagaattttgtcaaagtttAACTACTAA CTACATGAAATGTTAGTCATAATCAAGATTCTATTCGAATTTCTTGCGAA TTACGCAATTTACTCAAAATCTGGTCCAAGATATGGTCATAActtttttt agctttatttctgacccctactactaatgttttttggaatcagcataaaa tttctgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTAc taatgttttttggaatcagcataaaatttctgataatttgatATGCCACA TGACTATGTTTTGAGAAAGTTGGTGTTAGGCTATTATTGGTCCGAGGGTG CGCTGGGTACCCTGCAGAAATGGCGCCCGGGGGGACCCTGAAAAGGGTCc ccggtcaaaatttttgatttttttgttctttttatataatttggcagctt ttgtacatatgccactaattgtttttttctaagtcCCCTCCCTAGTTAAA TGTATAATAATGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAACTCAGTGACCAGTT TTTCCTAttttaatttgacttttttcattaggtaggtccattcagtatAA TCGCTaaatttaaaatcaataaaataatttcattttctgtcTTGTTTAAt tggatgatgatgatggaacaATGATTTGAAACTGAAAAACTAGGGAAGAC ACATCTTTTTTCTCTCGTTTTAGGTGTCAGCTTTGTCAGTCATGAACTGT TGTTGGCAATTCTTACCATACTCTTTTTCTATCACAACCAGAACATTAGG GGGAAAAAACATACCTGTAACAGTCGCATCATACCAATTTTCTCACCTTC ATGGGACGAGAAAAGAGAAATTCCAAATATCCCTGATCCATATACTGCTG ATCAACAGACGACAATTGAtagtaaaacaaaagaaatggtGGTTGAAGTT TTAATAGGTGTAAGGAAGACGAGAGATATTGTTAGCACAATAAAAGAAAT GTGTCTCCACAGAGCATTTGTGGAACAAGATGTTTTGAGAAAACCCTCCC CAAGAGATTGTCTTGATGATGATGAAGTCGCTCACAAAACGATTTTGGAA TACAATCTAAATGCATTTGGACTTGTTGTTTTTGAAACAGCAAGGGATGG TGATTGCTGTTTTCGTAGTATTTTACATCAGCTACATAACGTTTTTCAGT TAGACGACAACAAGGAGCTCGAAAACTATCTCACTGGTCTAAGCTTGGGT CAATCGATTGAAGATGACATCTCCACGTTGAGGTTAGTAAGTTTTTCGAA TCTTATAAATATACTGCTTGATTATCACACAACTCTTTTTCTGACGCATA TCGTCTCTTCTGCAATTCTCTTTTAAACAGACTGGACCCAACCATAGTGG GTCATCCCACTAAATTCATTTTTACatattaaaaataaagattACTTTAC ACTCTACTTTCAATTTCTGTCCTAATTTTCCTTTGTTGAGAAATAAGTct tattttggtgaatttcATTCTACGAGATTGAGTCTCGTGATATTTAATAG CAGCTATTTTTTTTACTCGCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034163XLOC_034163Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054143-exon-scaffold_241-1491911889:35002..35048TCONS_00054143-exon-scaffold_241-1491911889:35002..35048Clytia hemisphaericaexon
TCONS_00054143-exon-scaffold_241-1510915933:35002..35048TCONS_00054143-exon-scaffold_241-1510915933:35002..35048Clytia hemisphaericaexon
TCONS_00054143-exon-scaffold_241-1575043694:35002..35048TCONS_00054143-exon-scaffold_241-1575043694:35002..35048Clytia hemisphaericaexon
TCONS_00054143-exon-scaffold_241-1491911889:48475..49324TCONS_00054143-exon-scaffold_241-1491911889:48475..49324Clytia hemisphaericaexon
TCONS_00054143-exon-scaffold_241-1510915933:48475..49324TCONS_00054143-exon-scaffold_241-1510915933:48475..49324Clytia hemisphaericaexon
TCONS_00054143-exon-scaffold_241-1575043694:48475..49324TCONS_00054143-exon-scaffold_241-1575043694:48475..49324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_241supercontigscaffold_241:35002..49324 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 7.29749e-05 0 0 0 0 3.50494e-10 0 1.27791e-05 1.90071 0 0.844035 0 0 0 0 0 0 1.51178e-07 0 0 0 0 1.77428 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054143 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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