TCONS_00054144 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054144
Unique NameTCONS_00054144
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length906

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054144 ID=TCONS_00054144|Name=TCONS_00054144|organism=Clytia hemisphaerica|type=transcript|length=906bp
TGGTACagagaacaatgaaaatttaCCCAGACTACTCAATCGGAGCTTAT
TAAGAGGTGTCAGCTTTGTCAGTCATGAACTGTTGTTGGCAATTCTTACC
ATACTCTTTTTCTATCACAACCAGAACATTAGGGGGAAAAAACATACCTG
TAACAGTCGCATCATACCAATTTTCTCACCTTCATGGGACGAGAAAAGAG
AAATTCCAAATATCCCTGATCCATATACTGCTGATCAACAGACGACAATT
GAtagtaaaacaaaagaaatggtGGTTGAAGTTTTAATAGGTGTAAGGAA
GACGAGAGATATTGTTAGCACAATAAAAGAAATGTGTCTCCACAGAGCAT
TTGTGGAACAAGATGTTTTGAGAAAACCCTCCCCAAGAGATTGTCTTGAT
GATGATGAAGTCGCTCACAAAACGATTTTGGAATACAATCTAAATGCATT
TGGACTTGTTGTTTTTGAAACAGCAAGGGATGGTGATTGCTGTTTTCGTA
GTATTTTACATCAGCTACATAACGTTTTTCAGTTAGACGACAACAAGGAG
CTCGAAAACTATCTCACTGGTCTAAGCTTGGGTCAATCGATTGAAGATGA
CATCTCCACGTTGAGGTTAGTAAGTTTTTCGAATCTTATAAATATACTGC
TTGATTATCACACAACTCTTTTTCTGACGCATATCGTCTCTTCTGCAATT
CTCTTTTAAACAGACTGGACCCAACCATAGTGGGTCATCCCACTAAATTC
ATTTTTACatattaaaaataaagattACTTTACACTCTACTTTCAATTTC
TGTCCTAATTTTCCTTTGTTGAGAAATAAGTcttattttggtgaatttcA
TTCTACGAGATTGAGTCTCGTGATATTTAATAGCAGCTATTTTTTTTACT
CGCTTC
Run BLAST on NCBI

protein sequence of TCONS_00054144-protein

>TCONS_00054144-protein ID=TCONS_00054144-protein|Name=TCONS_00054144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=235bp
GTENNENLPRLLNRSLLRGVSFVSHELLLAILTILFFYHNQNIRGKKHTC
NSRIIPIFSPSWDEKREIPNIPDPYTADQQTTIDSKTKEMVVEVLIGVRK
TRDIVSTIKEMCLHRAFVEQDVLRKPSPRDCLDDDEVAHKTILEYNLNAF
GLVVFETARDGDCCFRSILHQLHNVFQLDDNKELENYLTGLSLGQSIEDD
ISTLRLVSFSNLINILLDYHTTLFLTHIVSSAILF
Run BLAST on NCBI

transcript from alignment at scaffold_241:40611..49324+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054144 ID=TCONS_00054144|Name=TCONS_00054144|organism=Clytia hemisphaerica|type=transcript|length=8714bp|location=Sequence derived from alignment at scaffold_241:40611..49324+ (Clytia hemisphaerica)
TGGTACagagaacaatgaaaatttaCCCAGACTACTCAATCGGAGCTTAT TAAGAGGTTtgtctgatttttttcatttctgtNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNtttttttgtattttgaccagttatgtcttat gtgtttcattattgtttcaatgttcactgattagtttgataactaggtag gtccataaaagtatcgcttgttgctgctatttttgtttttgttcatgAAT ATGTTTTAATACTGCCAAACAGTTTTCGAAAActgtttaacaaaaaaata ttttcccaagcTGTAGAATCATGTTGGGGTCTCCtatttttgtaataaaa tattcTATTCAACAACATTAATTATACCACATGATTTTACCCTAGTCAAA TATTGAGATAATACAACGTACTAAGATATTTTTCTATTGAAAGGGGTGCT AAAAGAGAGGTACCCAAATTTTAGAAATGATACTACTTGAGCTAAAAGCA GCATTCACTCTACTTTGGATAATTGTTAACGACTTAAAAGTAGaatctat ttatttcaattatggaaaacaatggaaattgaGTGTTTGTAAAAAAGACA TTATCTCGAAAGTAGAGTGAACACACTATGCTTTAGTGTTTAAAgtgttt aattttcaaaaattttccctttcTGAGTCAACCAAGGTGGCCTCttaaga aatgtttttgaactttttctttttgttcgcTTATGTTATGGTATAATTTT GAACAAGATTATGTCATTTAAAACTCATTATTTCACCGccatatgaaaaa aaaacaattaaattcaGAGAAAATCAGCCTTACTTTGCCCAGAAAACTCG TGGAAACTTGTTCATTAATTCCAGTCTGAACCTTGACAATTCTTCAGACT TGACAATTCTTCAACAactcaaaatttctaaatctttACTCTCACTTCGC TCCCAATAATTCCACTACATAAATTAACATTGTCACACAAGATGGGAAAT AGTCCCACTGCACAACTGCTTTATAGGAAAGTATAGAGAGGGGAATGTCT TGAAATCCTGTAATATTGTCTGATTGGGCTCTTCTCAAAACCTTTTTAGC TTCTCCAATattctttcttatttttgaccatttacatAAGATTCGAATTG TATTAAAGGACTTTGATCCAACTGATAAATCAAAAGACGATCTAGATTGT CATTATGTCAAATAAAACCTTTTGAAAATTGATCAAAAGCTTAAAAAGGT cagtttttctccaaaaattctgttttttaCCTCATTTCTGCACAGATTTT TTACTGCTAATTAGCCTGTTTGTCGATTGGAGGGCTGTCCGAACCCTGAG CTTGCATATGAGACATTTCATCCGTGATTTATGACCAGCTTCAAACCCAA CTTAGCTATATTTTTTGACCTAATTTTCTACAAATACTCCCCATAACTAA CCCTATTGAATACTGTTGCAAAGACTCTATGTATTTTACCCTTTTGATGA CATTGGAGGGCTTTCTGTAGCAGACCCAGGCAATTTTTTAGGCCGAAATG TCAtagtttaagaaaaaatttaagcACCTCATATCACAAAGACTATGCAT TTGTCCATAGATAGAGATTTTTTGGGgatcagtggcgttgtggcaggggg gccaggggggccatgcccccccccctgcgTAGCTTTTTTGAAGGGCAAGA AGAGCAAGGGGTgctaaaagagatttttttaaacgccccaatcttaaaaa tcatatttatgtgccttaaattgcgcccagggccaattttaatataataa taattttaagataatttttttttcgcgcgcttcgctcgcaatacagttaa ttggtaacttctttgcaatctagctaatttataaatttttatataatata gcattattaaatgaaaatttaactgcgccccaagaccaatatgctgacaa caatattgaaatcataaaatatcaatttttttactcgcttcgctcgcata acacattgtttctttaagtttcttttcactctagcaagtgtcaaatttgt ctatttttttttagtgatttagggtaacTTGgcagttgatttaaaaaaat tttctagtcggccccaaccatggtggggcctgtttctccattttccattc atcaaagataaatctacTCTTCTTCACTAAATATTACCTtctcattatgc ctaggcatgaatttagtaaaagtttagaaaatggtGGGTGGAGACACCAC TTCGGAAAATTGGAGGGGGGTGCCATTTAtaagaaattgactttggctCC TCNtttagtaaaagtttagaaaatggtGGGTGGAGACACCACTTCGGAAA ATTGGAGGGGGGTGCCATTTAtaagaaattgactttggctCCTCCAGAAA aattcccacaacgccactgttgGGGATGTAAAATAGGCccactggagaaa aaaattctggTGTTGCCTTTAAAAAAACATACCATCTTGAAAATGGATGA CATTTTTGGGTTGGGAATACCCTTTTGCCGAGCCATTTCTGGGCCGAGGG GGGtgataataatttcaaaatttcgattttagtgaaatattccaCCCATT AGACAAACTCATCAAGAAATCAAGCACTAAAAGTTTGTTGGGTAACCTCA ATTTTGTTATGAAGTTGCACTTGCtctaatttttcaactttttggcCTCT CTTCCAGGGGCCCTatcaaattttcaggaaatttttgGTAACCcactttt ggtttttctgattCCCACTCCCAGCATAAAGTTCTAATGAATTGAAAAGA AACAGACCTTCTATTCACTTCCAAAGTTTCTTCCCcacagaaattaaaat tttttggcacaaaatttcgctcaaacattcaaaattcaatgagTCATATC TCAAAAACCGCTTGAGATATGACGCTTTTCAGGACAGTCTTTTCTTGcca aaagggtcaaaatttaagCAAAATCTGAGACATCAAGGTATCGCACCTTG AGGGAATTTGAAGATTTATTTAAACAATGGCTCTTAATTATTTTAGCAAA GGAATACAAAACCATTTTCTTAGTAGCAAGACTGAAAAACTAACAATgac tcttattaaaaaataaattgtacacaaaatggtaaaatatgAAGCTATCT AATTGTGATTAAAATTGTATGTTAAGGATCTTGATATCAATTTGATAGCT Tcatattttaccattttttgtacaatttatattttttaataagagtcatt gttattttttcaaagattgggcttttccagaaaaaatctgttcatggggg gtggaggatagattatttttttcatgaattacccctggacacgggttata cccctggacaaacatcaaatcaaccccgtggacacataaatttacccctg gacattggaatttaccccctggacattgcaactttttggtattttttcaa taccccagGACAATTCagcctccaccccccatgaacggatttttttctgg aagagcccattgctgGAAAACTTGTACTTCTTGTGTATTTGTTTCTCTGA TGACCTGAAAGATATTGATTACTTATTGTAATTTATTGTAAACTAGTTAA ATGACAATATGGTTGAGAATTTCAAGAAATGCTGGAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNCAATAATTCATAATTATTtaata aataatgttttaataTCGCAATTTCTGGCTtcataaaatatattttgctc TTGTTCAATACAAAGTACAATACAAATGTCTTCATATCATGAAAGCAGTT ACATTCAATAAACCagaattttgtcaaagtttAACTACTAACTACATGAA ATGTTAGTCATAATCAAGATTCTATTCGAATTTCTTGCGAATTACGCAAT TTACTCAAAATCTGGTCCAAGATATGGTCATAActttttttagctttatt tctgacccctactactaatgttttttggaatcagcataaaatttctgatN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACTActaatgtttt ttggaatcagcataaaatttctgataatttgatATGCCACATGACTATGT TTTGAGAAAGTTGGTGTTAGGCTATTATTGGTCCGAGGGTGCGCTGGGTA CCCTGCAGAAATGGCGCCCGGGGGGACCCTGAAAAGGGTCcccggtcaaa atttttgatttttttgttctttttatataatttggcagcttttgtacata tgccactaattgtttttttctaagtcCCCTCCCTAGTTAAATGTATAATA ATGCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNAAAAAAACTCAGTGACCAGTTTTTCCTAtt ttaatttgacttttttcattaggtaggtccattcagtatAATCGCTaaat ttaaaatcaataaaataatttcattttctgtcTTGTTTAAttggatgatg atgatggaacaATGATTTGAAACTGAAAAACTAGGGAAGACACATCTTTT TTCTCTCGTTTTAGGTGTCAGCTTTGTCAGTCATGAACTGTTGTTGGCAA TTCTTACCATACTCTTTTTCTATCACAACCAGAACATTAGGGGGAAAAAA CATACCTGTAACAGTCGCATCATACCAATTTTCTCACCTTCATGGGACGA GAAAAGAGAAATTCCAAATATCCCTGATCCATATACTGCTGATCAACAGA CGACAATTGAtagtaaaacaaaagaaatggtGGTTGAAGTTTTAATAGGT GTAAGGAAGACGAGAGATATTGTTAGCACAATAAAAGAAATGTGTCTCCA CAGAGCATTTGTGGAACAAGATGTTTTGAGAAAACCCTCCCCAAGAGATT GTCTTGATGATGATGAAGTCGCTCACAAAACGATTTTGGAATACAATCTA AATGCATTTGGACTTGTTGTTTTTGAAACAGCAAGGGATGGTGATTGCTG TTTTCGTAGTATTTTACATCAGCTACATAACGTTTTTCAGTTAGACGACA ACAAGGAGCTCGAAAACTATCTCACTGGTCTAAGCTTGGGTCAATCGATT GAAGATGACATCTCCACGTTGAGGTTAGTAAGTTTTTCGAATCTTATAAA TATACTGCTTGATTATCACACAACTCTTTTTCTGACGCATATCGTCTCTT CTGCAATTCTCTTTTAAACAGACTGGACCCAACCATAGTGGGTCATCCCA CTAAATTCATTTTTACatattaaaaataaagattACTTTACACTCTACTT TCAATTTCTGTCCTAATTTTCCTTTGTTGAGAAATAAGTcttattttggt gaatttcATTCTACGAGATTGAGTCTCGTGATATTTAATAGCAGCTATTT TTTTTACTCGCTTC

Coding sequence (CDS) from alignment at scaffold_241:40611..49324+

>TCONS_00054144 ID=TCONS_00054144|Name=TCONS_00054144|organism=Clytia hemisphaerica|type=CDS|length=1416bp|location=Sequence derived from alignment at scaffold_241:40611..49324+ (Clytia hemisphaerica)
GGTACagagaacaatgaaaatttaCCCAGACTACTCAATCGGAGCTTATT
AAGAGGTGTCAGCTTTGTCAGTCATGAACTGTTGTTGGCAATTCTTACCA
TACTCTTTTTCTATCACAACCAGAACATTAGGGGGAAAAAACATACCTGT
AACAGTCGCATCATACCAATTTTCTCACCTTCATGGGACGAGAAAAGAGA
AATTCCAAATATCCCTGATCCATATACTGCTGATCAACAGACGACAATTG
AtagtaaaacaaaagaaatggtGGTTGAAGTTTTAATAGGTGTAAGGAAG
ACGAGAGATATTGTTAGCACAATAAAAGAAATGTGTCTCCACAGAGCATT
TGTGGAACAAGATGTTTTGAGAAAACCCTCCCCAAGAGATTGTCTTGATG
ATGATGAAGTCGCTCACAAAACGATTTTGGAATACAATCTAAATGCATTT
GGACTTGTTGTTTTTGAAACAGCAAGGGATGGTGATTGCTGTTTTCGTAG
TATTTTACATCAGCTACATAACGTTTTTCAGTTAGACGACAACAAGGAGC
TCGAAAACTATCTCACTGGTCTAAGCTTGGGTCAATCGATTGAAGATGAC
ATCTCCACGTTGAGGTTAGTAAGTTTTTCGAATCTTATAAATATACTGCT
TGATTATCACACAACTCTTTTTCTGACGCATATCGTCTCTTCTGCAATTC
TCTTTTAAGGTACagagaacaatgaaaatttaCCCAGACTACTCAATCGG
AGCTTATTAAGAGGTGTCAGCTTTGTCAGTCATGAACTGTTGTTGGCAAT
TCTTACCATACTCTTTTTCTATCACAACCAGAACATTAGGGGGAAAAAAC
ATACCTGTAACAGTCGCATCATACCAATTTTCTCACCTTCATGGGACGAG
AAAAGAGAAATTCCAAATATCCCTGATCCATATACTGCTGATCAACAGAC
GACAATTGAtagtaaaacaaaagaaatggtGGTTGAAGTTTTAATAGGTG
TAAGGAAGACGAGAGATATTGTTAGCACAATAAAAGAAATGTGTCTCCAC
AGAGCATTTGTGGAACAAGATGTTTTGAGAAAACCCTCCCCAAGAGATTG
TCTTGATGATGATGAAGTCGCTCACAAAACGATTTTGGAATACAATCTAA
ATGCATTTGGACTTGTTGTTTTTGAAACAGCAAGGGATGGTGATTGCTGT
TTTCGTAGTATTTTACATCAGCTACATAACGTTTTTCAGTTAGACGACAA
CAAGGAGCTCGAAAACTATCTCACTGGTCTAAGCTTGGGTCAATCGATTG
AAGATGACATCTCCACGTTGAGGTTAGTAAGTTTTTCGAATCTTATAAAT
ATACTGCTTGATTATCACACAACTCTTTTTCTGACGCATATCGTCTCTTC
TGCAATTCTCTTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034163XLOC_034163Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054144-proteinTCONS_00054144-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054144-exon-scaffold_241-1491911889:40611..40666TCONS_00054144-exon-scaffold_241-1491911889:40611..40666Clytia hemisphaericaexon
TCONS_00054144-exon-scaffold_241-1510915933:40611..40666TCONS_00054144-exon-scaffold_241-1510915933:40611..40666Clytia hemisphaericaexon
TCONS_00054144-exon-scaffold_241-1575043694:40611..40666TCONS_00054144-exon-scaffold_241-1575043694:40611..40666Clytia hemisphaericaexon
TCONS_00054144-exon-scaffold_241-1491911889:48475..49324TCONS_00054144-exon-scaffold_241-1491911889:48475..49324Clytia hemisphaericaexon
TCONS_00054144-exon-scaffold_241-1510915933:48475..49324TCONS_00054144-exon-scaffold_241-1510915933:48475..49324Clytia hemisphaericaexon
TCONS_00054144-exon-scaffold_241-1575043694:48475..49324TCONS_00054144-exon-scaffold_241-1575043694:48475..49324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_241supercontigscaffold_241:40611..49324 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 1.68763 0.979749 0.958532 12.6302 10.2518 9.55257 10.4125 2.03668 4.83934 3.84125 3.49165 2.93171 1.82153 1.655e-08 1.75656 3.19193e-08 3.60318 0 0 0.794941 0.54431 1.3559 2.37828 4.97313 6.04793 0 0 6.12639e-08 1.49657
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054144 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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