TCONS_00054147 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054147
Unique NameTCONS_00054147
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2151

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054147 ID=TCONS_00054147|Name=TCONS_00054147|organism=Clytia hemisphaerica|type=transcript|length=2151bp
tttagaaaGGAGCTGTCTGACCTGGACAAAACAATTGAAAAGAACGGCTg
tctttatttaaaaagtgaaGAGAACGAAAAAAAGATGACCAATTGGATTC
CTAAAATTGTCGGTAAGGTGATGAAAAACGGTAGAGAGAATGGCTATATT
TTGGAACATCAACCAAATACAATGGCAGCTGATAATGAGAAAATGAGaaC
ACACATAACGATGAAGGATGTATCATCTTATACTTCCCTCATGGCGGCAA
TTAATAGTGGAGGAAAAGGTAAAGCGCTGTTGACAATCCAATTCAGCCCA
ATCCTCCGTACAGATCAGTGGTTGACTGATTATACCAACAACCTGGTTGA
TCAATTGATTGATATTCCAGTCCTTCATCCTATTACTAAACCAGGACGAC
AAAAACAGGATACCTGGGTATATCCAGATGGAAAGGGTAGAGTGAGGATT
TTCAAAGTAATAGATGGAAAATATGTTGAAGTTGACGAGGTCGAAGCAGG
CCTTACATCTCTCTGTCACGATTTTTCAAGGGGCCTAAACTTTGCAGAAA
AATTGGATGGCACTTTTAAGGACCTGGTACCATTGGTAGAGAATAACTCG
CATGGAAGTTCTTTTCCATGCATAATACAAGTTTATTCGGCCGCTTTAAT
GGCATTGCATTACGAAactatttataaaaagttttctgGATGTCCGATGC
CTTTGGTTATTGGTCGTTCTGGTACTGCGAAGACAACACATACGAGAATT
GCTGCACGGACAATTGGTATCAATGGTAGTATGTATCGTCCTACCAAGGC
TGTTTTAGAAAGACGTGTTGCTGCTCATTTGCCACTTTGGTGGGAAGATG
TTGAGAACAGGAACGTTCTTGAGGCTATGGTGTTTATGATATTTAATCAT
TCGGAAGTACCAAATTGCGACAAAGACGAAGACCCGCCTGCTCCACCCAA
TACAATGCCCATTGGCACCACCAacgggaaatttttgaaaaacttccgGG
CAGAAGATTGGCCAAGATTTGAAGAAAGAATAGTGTTCATTCCGATTATG
GAGAAAGTGGAGAGTCAGCTGTCGCTtattgaaataatgaaaaatgacgA
AACATTTGATCAACTGCGTATTGTAGCCAGCCGCTGCTTTTTAGATTGCC
TCAGCTTGGTTGAGGAACTCGAAAAAGACCATTTTTACACTGATGCTCAC
CTAGTTGCTACCGACAAACTTTTCTCCACAATTGACTTCTTTGAAAGTGT
GCGATCGAAGAAAAACTATGGAATATTGTTATACATTACATCTAAGATTT
TATCTAAGGCTGGATTCTCACAAGAAAGAATCACTGAGATAAACAAAACA
TTCCTGATCAACCATTTAAAACCTTTTTTGGAGAAAAGGGTGGTTGATGA
AAACgacacagacattgtcagagaAGAAGCCTCGCTAAAGAAATTTTTCA
TCCGTGCTATGGAAAATCCAAAGacATCACTTTTCGTAACTGACAACGAG
AAAGCTGCTGAAACATGCAAAGATTGCATTTCTTTTGCACTCCAACCGAT
TAACACGGAGCTGAAATTTTTCAAGCCGGATCAGCTCTCAAGTATTAGAC
AAATAATTGTAGAAAATGGATGTGGATTGACCAAACGAAGAATGATCGGT
GGACCAAAAAACACCCAAATAAATTGCATGCATATAAAGGTCGCCTTCAT
GAAAGAAGAATTCACTTCATTTTTTGCTGGTAAGAAACATACTGCAATCT
attaatttttctgaattttctaattCGATTATCACTACTAATTACTATCA
ATACTAATTTTGGCAGTTAGTCGAAAGGCTATTTCCGGCCGGTATTAAAT
CTGGAGTTTatcaagtttgaaaattttggcggATGACAGAAAACCAATAA
TAAAAGGGGTTGTGTCCATTGTGTTTGTATGGCAAAGAAAAGATGACACC
CAGACTCAACTTGAGCTGAGCTAGAATCTGGGAATGTATGTATATATGGC
TCGATAGTACCGGGTACACCACGAAAAAGTTTAACAAAAGATTTGCATGC
AATAACAAGGACAATTTCAACTCACACACTccacccacgcaatttagcag
actctaaaaaaatatcattcttGTCTTTTCTTTTATTGTCAATTGCTTCC
A
Run BLAST on NCBI

transcript from alignment at scaffold_241:72567..92189+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054147 ID=TCONS_00054147|Name=TCONS_00054147|organism=Clytia hemisphaerica|type=transcript|length=19623bp|location=Sequence derived from alignment at scaffold_241:72567..92189+ (Clytia hemisphaerica)
tttagaaaGGAGCTGTCTGACCTGGACAAAACAATTGAAAAGAACGGCTg tctttatttaaaaagtgaaGAGAACGAAAAAAAGATGACCAATTGGATTC CTAAAATTGTCGGTAAGGTGATGAAAAACGGTAGAGAGAATGGCTATATT TTGGAACATCAACCAAATACAATGGCAGCTGATAATGAGAAAATGAGGTA CGTGCAACTGATACCGTTATATTCAGTAGAGTATTGCTATATTAAAATCG CAaggaatcaaaaatttttttggttttgttttccTTGCAGGGTTCCCAGC GCTCAGGGAAAACCTGGGAAATCTGGAAAAAAGGCTGTATTTGGAAAAAG TCAGGAAAAGTCAGAGAAAAGTCAGGGAATTTTCTCACAGGTTGAGCTAT AATTTGAAAATCAACAATTTTGGNAAAAGTCAGGGAATTTTCTCACAGGT TGAGCTATAATTTGAAAATCAACAATTTATCTTAATTTATCCATTTCATT TTTTAAGGTTATATGAAAAGTGacagttaccaacttttctcaggattgaa tcataggaatcttagaatttttggtacaaaggtgcaaaattgTAGTAGCC CGATTTTCGACAAAAAAAATTTTCGCCAAATTTGGGACAAAAAACGGCTA AAAATGGGTTTTTTGGACTTTGGATCATCAATTTTCTCTGATTTTTTGTA TGAAAGCAGGGTACCATCGTAGGTAAAAGATGGCTCAAGCTCAAGCAGAT TTTTGCAAAAAATTTTGTTGGCTCAAAAACCACATGTTTATCTATAAGAA TCACTATTAATGAGCATACATCAATGTTCTTAGCCATATTATTATTTTTA TTAGTTTTTTTAAAATGAAAATGTCACGGTGGAGGGCAATGGTTTGAGTT TTCTAGAAACACTTATTATTTTTTTGCATGGCTGAAAAACGAATCTTTAT CTATAAGAATCACTATTTATAAGCATAGATCAATGTTCTTAGCCAAATTA TTATTGTCACGGTAAAGTGCGATGGTTTGAGTTTTCTGGAAACCTTATTT ATAAGCTGTGCATTTTTCTGATAGTGGATTGTTTTTATAAAAAAAgcgtt taatagcttttttatttctttttcaaaaatcttttcaatagtgtttgata gtttctctcaatatatatgctttcattttcttaatttttttgtattttga ccagttatgtcttatgtgtatcattttttcaatgttcattgattagtttg ataaccaggtaggtccataaaagtaccACTTGTTTCCTTCTAGAGCAATC TTTGGGAACGTTTTGACTGCCAGAACTTTTGGAATAGACTTTAAAATAGC ATTGATATTCTATATaattaaattatatttttagaaCACACATAACGATG AAGGATGTATCATCTTATACTTCCCTCATGGCGGCAATTAATAGTGGAGG AAAAGGTAAAGCGCTGTTGACAATCCAATTCAGCCCAATCCTCCGTACAG ATCAGTGGTTGACTGATTATACCAACAACCTGGTTGATCAATTGATTGAT ATTCCAGTCCTTCATCCTATTACTGTAAGTGCATTTACATGTTTTATAAT TATGGGGTTGAACAGGTTTTGGAAAAAATGCCTATCATGCACTTACTCCC CCACTCCATGTGATATACTACAtggtttttataagcaaccggaGCTGTCT AGCCCTAGCCAAAAAATTAAGGAACTTGGCTAGCAAACTAGCCCTGAAAC TGAGcataaactgaaaaaaaaagccTAGTAAGAGACATCATAATGACATT TTCGGCTCAGAATCCAAAGCAGCTTTTTagtttgaaatcttgaaaatggc TAGTAACTACAACCCTGAGTCGAAAACCGGGGTTGCTTGTAAAAAATGTA CACTTTCCTGAAAGGTTGGAAATACCTTCGAACACAACTGATTAAAGACA AACAATATTAAAGTTTAAAACATAATCCTCATTTTGAGAGAAAAGCCTCG AGATATTCTCTCAAATAAGCAGaaattgtctttaaaaatatttgcaaTAT CTCAGTTTGTATCTCAGTATGAAGTAtgaaatttctgatcgattgatata taatAAGCGTATGTttgctttcaaaaaaatttcaattttgactgAGGGGG TCCCAAAAGGGGGTCTCCGCTAAAATTCggccattatggatacccaaatg agaaatccaggtggcaCGGAAGTTTAAATATTCTAAataccataaggaac aagaaaaacctcGAAAAAATTAGGCTcgcaaatggataagatacttcccg gctcgtaccAGTCTAAAAGTGTAGAtatataaactcgctaataatcGGCT AACAATTCatagtaccttaagggaagaaatttttgcgggaacaaaatttc gcggttttcgcggattttgcctaaaaccgtGAAATTAAGTTcctgcaaaa ttaagttcccacgaaattttacaaaatcgtcaatccgcgaaatttaattt atttcacgctttcccccaaattcgtactatttcaagccttaaaacaggtt ttttgcttatttaataatGCTTTTGGCCATAAATATCCTGcaaccacgaa attaaattcccgcaaaaaaaaataatttgaccaaccgcgaaattaaattc ccgcaaaaatttcttcccttaaggtaaacaaaaagaaaataataaaacac aAAGTTTaaatccgttatttttatctatTACTATTTTAGAAACCAGGACG ACAAAAACAGGATACCTGGGTATATCCAGATGGAAAGGGTAGAGTGAGGA TTTTCAAAGTAATAGATGGAAAATATGTTGAAGTTGACGAGGTCGAAGCA GGCCTTACATCTCTCTGTCACGATTTTTCAAGGGGCCTAAACTTTGCAGG taaatttcatttgatttttttagacTATAGCAAGGTTGGGCAAGAGTTTT TGGTATGCACGGGCTCTATTACGTGATGTTTCCACAGTTTAGCGCCTATT ATACAGGCTAAAAGGCCTGCCTTTTTTACTTGTAAGGAGTATTCTATCNC ACGGGCTCTATTACGTGATGTTTCCACAGTTTAGCGCCTATTATACAGGC TAAAAGGCCTGCCTTTTTTACTTGTAAGGAGTATTCTATCATGTGAGATC TTCCAATGTTCTGTAGTACGCAATCAGTTAGGAACTAAAGCATTTCAGTA AAGGATTGGATAGGgccaaaaaatcaaatgttaACAAACAAAATCAAGGC TAGAATGGCGCGAATCCAGTCTTGAGAACTCGCCTACTAAGAGAGCTTGT GTATCAAAATAAACTCTTGCTTAATCTCActtatatatttttacatgaaa cTCTCATTGCCCTACAAAGATCCTAAAGATTAACCTATGTTCGTCCATAC TTCTGTTAGAAGTTTTTAtcgtttttgaaaattgaaaaatcttgcCGTGT GTCGGTCTGTTACGGTTAAAGAGGTTTCATGACGCCTATTTTCCAACTTT TCTTGGGAAAAGGTTGGAAAGAGCAAAGTGTGGGAGTGctcttttgaaaa atcaaagataCACTTACATTGAAGCGTTGTATTAACagcgtagtggtata gtggttatcgaGTTTGTCTGCCGCCTAGGAGGTATTTagctatttttttt tatatgggACTACTGGTTGAAACTCTCATTTGCTTATAATAACGATTGCT ACATTCTATTTTCCCAGAAAAATTGGATGGCACTTTTAAGGACCTGGTAC CATTGGTAGAGAATAACTCGCATGGAAGTTCTTTTCCATGCATAATACAA GTTTATTCGGCCGCTTTAATGGCATTGCATTACGAAactatttataaaaa gttttctgGATGTCCGATGCCTTTGGTTATTGGTCGTTCTGGTACTGCGA AGACAACACATACGAGAATTGCTGCACGGACAATTGGTATCAATGGTAGT ATGTATCGTAAGTGCCATTTGATGCATAGAGAACTTTGGTTATATTATGG TTAGCTTGAATCATGTATACTTAATATCTAAATTTTCCGATGAGTCTCTG CGTCTCTGTTATTGTTTTTCTCAGGAGAAATCTACCAATGAATGTGaatt gaaagaaatattttgattgaaatCATAATTTCTTTAAACCTTTCGCTGCC TGCACTAGCCACAATCAAATGCAGAAACTTTgaccagtatttcttacttc AGGTCCTACCAAGGCTGTTTTAGAAAGACGTGTTGCTGCTCATTTGCCAC TTTGGTGGGAAGATGTTGAGAACAGGAACGTTCTTGAGGCTATGGTGTTT ATGATATTTAATCATGTAAGTGTAACCGATCCTAACTAACTTTTCTCACC TGTTCTCAAGTGCCGTTTGTTTAACTCTATGTGACATCATAGTTCAAACG CTTAGTCAAGCGACAATATTTTCAGGCTGTTGAAAAATACCCAAAACCTT TATCaattatcaaataaataaatcaagtTTTTTAGACCAAAATAATCAGG GGATCGGTAGTGTCATTTATTACTGTGAGGGTATAGCAAAAAGCGAGAAA ATCTTTTGCTACCTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNCAGTTAGCGTGGTCACTGGTTGGATTCTTTAG TAGTGGAGAGCACTGTTAAAGAATATAACCTAATGTCGTTTAACCTAATA ATgttataaaatacagaccagagagtatttcactgttaaacagtccaacc tagtccactgttaaacaatccagcctatagtcatgtccggtccactgttt aacaatccaacctagtccactgttaaacaatccaacctatagtcatgtcc ggtccactgtttaacaatctgacctagtccactgttaaacaatccaacct agtctactgataaacaatccaacctagtccactgtttaacaatccaacct agtccgctgttaaacaatccaacctatagtcatgtccggtccactgttta acaatctaacctagtccactgttaaacaatccaacctagtctaCTGATAA ACAATctaacctagtccactgtttaacaatccaacctagtccgctgttaa acaatccaacctatagtcatgtccggtccactgttaaacaatccaaccta gcccACTGATAAACAATctaacctagtccactgtttaacaatccaaccta gtccgctgttaaacaatccaacctatagtcatgtccggtccactgttaaa caatccaacctagtccactgttaaacaatccaacctagtccactgttgaa caatccaacctagttcactgtttaacaatccaacctacccatgtccggtc cactgttaaacaatttaacctagtccactgttaaacaatttaacctagtc cactgttaaacaatccaacctagtcccctgtttaacaatccaacctaccc atgtccggtccactgttaaacaatttaacctagtccactgttaaacaatt taacctagtccactgttaaacaatccaacctagtccactttttaacaatc caacctagcccACTAGTTTTAAAGCAATctaacctatagtcatgtccggt ccactgttaaaaaatccaacctagcccactgtttaacaatccaacctagt ccactgttaaacagtccaacctatagtcatgtccagttcactgttaaaca atctgacctagtccactgttaaacaatcctacctagtccactgttaaaca atccaacctagtccattgttaaacaatccaacctagtccactgttaaaca atccaacctagtccactgttaaacaatctgacctagtccactgttaaaca atccaacctagtccactgtcaaacaatccaacctagtccactgttaaaca atccaacctagtccactgttaaacaatccaacctagtccactgttaaaca atcctacctagtccactgtttaacaatccaaactagtccactgtttaaca atcctaaatagtccactgttaaacaatccaacctatagtcatgtccggtt cactgttaaacaatctgacctagtccactgttaaacaatccaacctagtc cactgtttaacaatccaacctatccatgtccggttcactgtttaacaatc caacctagtccactgtttaacaattcaacctagtccactgtttaacaatc caacctagtccactgatAAACAATCCAATCTAtccatgtccggttcactg tttaacaatccaacctagtccactgtttaacaattcaacctagtccactg tttaacaatccaacctagtccactgatAAACAATCCAATCTAtccatgtc cggttcactgataaacaatccaacctagtcccaTCCCTTCCCAAGGAGAA CTATTGTtcgttttaaaaatcgaaaaatctgtGGAACTCTTTTACGCTCC AGCAAAGAATTTCATAAAACAGCAATACAGAAAAAAGCTATCTTATCaga caaaattttcataaacagCAACTTGAGCAACTATAATCGTTTACTTTGGG GGAAATCAAAAGCATTGTTGAAGGATAATCAAATTCATAAGTTTTGGTTG TTCAATGGAAACGTTTATATAAAGATTAATGAAAATGACAATCCCCGACA ATCCTTTAAGGATTGGCCAtattggctgcgtttagaccagcctggcattt gtaattgcttgcagtattcttttgaattctattgttccgcgcaattgttc ggtttgtcaaatgcctaatgatNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNttcggtttgtcaaatgcctaatgatgccagcgtgttggcat ttcgttggcatttgaaatgccattttgagcaaaggaatccccttttctgg catttcgaatgaaacaaaggaaacaaaacagagagaaaaagtgacatttt tgatcttttaaagtatttgatgttttttattcagttctttctatagattg taaaatttgcaagatttgccatagcctagccctacggcaaaaagtttcag tcttaatgactgcagtttttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctt aaatgccatgacagaaaatacaatggaaaagctattaaaatcgaatccct catgagcaaatgccaaattacaaatgccagttggtctaaacgcagccatt aaTGACCttatttcgaaatttccaatctgtggctgcgtttagaccaactg gatTTGTAATTTgacatttgctcatgagggattcgatcttaatagctttt ccattgtattttctgtcatggcatttaaggaatcgtctttttagagtcat tactgaaaaggtgattccctcaagttcaaNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNaagggattcctttgctcaaaatggcat ttcaaatgccaacgaaatgccaacacgctggcatcattaggcatttgaca aaccgaacaattgcacggaacaatagaattcaaaagaatactgcaagcaa ttacaaataccaggctggtctaaacgcagccattctCAATAATGTTTGAC ATTTGATTTTAATATTGATGGTTTAATGTGTAAGGCTTGGGgtatgtttt ctttcttttcgttCGTAAGACTTAGGGTACCGTAAGTCTATCCttgtgtt tatattttttgtttttttttttcttaacatttttttggttgTTCTATACC TATGCAGACAGAAGCCTAGattagcaagcgtctgtctttccttggacaca ggaacgcgggaatagtgcttataataaagagttcttataaaaaatagaaa ttgccgcgggagagtggattggaaGACATTgttgtattcagtgaacatat agaaaaatagatcccattgcaagtttaatctgcagcgaaatacaacgacg tggtttactagtctaacaGAAGCCTGTTCCATATGCgctagaaaattaaa aatcgaaaattctAACTACTGTCCTAGGTGCAAAAGACGATCCCATGCTA AGTGTAACGGCATAGAagcaaaattcattaaaaatatcTGCCTCTGCAAA ACTTGCAGAATTGAAGCATTACCTAATTTTGATTCTGATGATGAATTACC TGCTGGTAAAGACATAAGTtacttaaaatcatattttgagcaatttgaaT TCTATCTCGAATACTTTTTCTAACATTGATTCGCAAAAAGACGACCAGAT TAACGAGTATGACTATAATGACCACGTGAttaattttaactgtaaatatT ACAGTACTCAAGAATTTACCTCTCTTCCTCTCAACAAAATTCACTCTCTT GTTTTCATCTTAACATATGTTTTCTAAACACCATGACAATCTCATGACAA TATTATTATCTTGGTTTGATTGGTGGATTCTTTGCAACATTAGGTAATGT TTTTGTCAGGTTTGTATCGAAAATCTCGTGCTTACGTAGTTGGTGGTTTG GTCTCTACCGAGAGGAATGTTCGAATTCCAGGGATCATCTTTTTTTCTCA CGATTGGTCGAATCGTTCGTTAAACGTTTGCTTTCAGAGTTCATTCCAAA TTTTGATTGCTGAATTTACAAAGCTATTTGATTGGTTGTATATTTGGAGA ATAGAAGGCAGCTATCGTTGTTGTTAGCTACGGCGTTATGATTGGATAAC TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNGGAGGTATTGGCATTTATACTTATACTTGGTGGAAATACACTACATAG TGTGAtttgcgttgttactaaaagaggtaacgagtggtaatgatgtggta acgagtggtaacgatgtggtaacgagtggtaacgatgtggtaacgagtgg taacgatgtggtaacgaggtggtaacgaggtaaccAGTTAAGAACGGTGG ccctaaaggctctaattttgAATAACTCGATACTGGTGAATGTAGAGCAG AACTTAATGTTTCTAGTGAATGTGATAGTGGAGTTGGTGTTCCtgttgaa tgtgcagcaggggttggtggttctggtgaatgtgcagctgAATATGGTGG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TGTTCCtgttgaatgtgcagcaggggttggtgattctggtgaatgtgcag ctgAATATGGTGGTTTTGATGattgtgcagcaggagttggtggctCTGGT GATTCTGCAGCAGGACATGATTGTTCTGTTGATTCTGCGACATGAACTGG TGACTTTGCAACAGAACCTTGTTGTTCTGGTGATTNCGTGATAgttgagt tgatggttctggtgaatgtgatagtGGAGTTGGTGGTCCTTGTGATTCTG CAGCAGGACATGATTGTTCTGTTGATTTTGCGACATGAACTGGTGACTTT GCAACAGAACCTTGTTGTTCTGGTGATTCTGCAACAAAACTTAAAGCATC TGGTTATTCTGAAGCAGCAACTTGTGATTATGGTGATTATGCAGCAGGGA CTGGTTGTTCTGGTGGTTATGCAACAGATCCTTGTGGTTATAAAGGTTCT ACAGAAATACATGTTGGTTCTGATGCTTCTTAGCACAAAACTGTTAGTTT TGGTAGATCTACATCAGGACTTGGGATGGATGGATTATCATGAATTTCGA ATATATTGTATTCAGGTGTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNTCTACATCAGGACTTGGGATGGATGGATTATCAT GAATTTCGAATATATTGTATTCAGGTGTTTGACAGTTTTCTATAGGGCTA GAATTGTGATAAATGCTATATAAAGACATTAACAACTGTCAGTGTTTGAC TTATTTTGCCAGATAACTAATATTAGTAATAATGTGTTGGCTTATAGGTT TGGACTATAAGCTCCACCATTACATCCACAAGAAACTCAAACTCCTGCTC CCCAATCATATgcaccagaaccaccaaatccACCATCAAATTCATCAGTA ACTCCAACTTCATCAGCAACTCAAACTCCAACATTGCATTCaacagaacc atcaactccaccatcacattcaccagtaccagtatattcaccagaactat CAACTCCTGCATCCCATTCACCAGAAACACCAGTCCCTGCTGCTAATTCA ACAGAATCACCGACTCCttatgcacattcaccagaatcaataACTCCAtg atcacattcaccagaacaaccaactcctgctgcacaatcatcaaaaccac caacttcagctgcacattcaccagaaccaccaacccctgctgcacattca acaGGAACACCAACTCCGCTATCACATTCACTAGAAACATTAAGTCCTGC TCTACATTCACCAGTATCCAGTTcaaaattagagcctttagggCCACCGT TTTTAACCagttacctcgttaccacctcgttaccactcgttaccacaccG TTACCACTCGTTAGCTCTTTTAGTTGCCTTTTTTGCTACAATGAGCTagg aaaatatgaaaatgcCAATACTTCCTGAACCAGAAAgatttagtgttttt ttatagCACGTTGGATAGCtgagagtctcttctttctttaagAGCCCAGT GACCAGGAATGAAACTAAGTTAGGTTGTCTACTCGTGACAAGGGAtagga ctaggttggattgttaaacagtggactaggtaggattgtttaacagtgga ctaggtcagattgtttaacagtggaccggacacgactataggttggattg ttaaacagtggactaggtaggattattaaacagtggactaggttggattg ttaaacagtggactaggctggattgttaaacagtggactaggttggattg ttaaacagtggactaggttggattgttaaacagtcgactaggttggattg tttaacagtggactaggttgaattgtttaacagtggactaggttggattg tttaacagtgaaccggacatggctatgttggattgttaaacagtggacta ggtcagattgtttaacagtgaaccggacatgactataggttaaattgtta aacagtggactaggtaggattgtttaacagtggactaggtcaaattgttt aacagtggaccggacatgattataggttgaattgttaaacagtggactag gtaggattgttaaacagtggactaggttggattgtttaacagtggactag gttggattgttaaacagtggactaggttgtattgttaaacagtggactag gttggattgtttaacagtggactaggtcagattgtttaacaatGAACTGA ACATGGCTAGGTTGGactgttaaacagtggactaggtaggattatTTAat agtggactaggtcagattgtttaacagtgaaccggacatggctaggttgg actgttaaacagtggactaggtaggattgtttaatagtggactaggtcag attgtttaacagtgaaccggacatggctaggttggactgttaaacagtgg actaggtaggattgtttaatagtggactaggtcagattgtttaacagtga accggaaATGGCTAGGTTGGACTGTTAAACAGtcgactaggtaggattgt ttaacagtggactaggttggattatTTAGCAGTGAACCGGACatgactag gttggattgttaaacagtggactaggttggattgttaaacagtggactag gctggattgttaaacagtggactaggttggattgttaaacagtggactag gttggattgtttaacagtggactaggtcagattgtttaacagtgaaccgg acatggctAGGTTGGACTGtcaaacagtggactaggtaggactTTTTAat agtggactaggtcagattgtctaacagtgaaccggacatgactaggttgg attgttaaacattggactaggttggattgtttaacagtggactaggttgg attgtttcacagtggactaggttggattgttaaacagtggaccaggttgg attgttaaacagtggactaggttggattgtttaacagtggactaggtagg attgcttaatagtggactaggtcagattgtttaacagtgaaccggaaATG GCTAGGTTGGactgttaaacagtggactaggtaggattgtttaacagtgg actaggttggattatttaacagtgaaccggacatgactaggttggattgt taaccattggactaggttggattgtttaacagtggactaggtcagattgt ttaacagtgaaccggacatggctaggttggattgtttaacagtggactag gtcagattgtttaacagtgaaccggacatggctaggttggattgtttaac agtggactaggttggattgttaaacagttgactaggttggattgttaaac attggactaggttggattgtttaacagtggactaggttggattgtttcac agtggactaggttggattgttaaacagtggactaggttggattgttaaac agtggaccaggttggattgtttaacagtggactaggtcagattgtttaac agtgaaccggacatggctaggttggactgtttaacagtgaaatactttct ggtctgtattttataacATTATTAGGTTAAACTACATTAGGTTATATTCT TTAACAGTGCTCTCCACTACTAAAGAATCCAACCAGTGACCACGCTAACT GCACCTGATCCCGTTTTCTAAAGGAAAAGGCTTTGTATTCAGTGCACGTA GTTGCCTGTGGGCAAGGAAAGCTGCTGCGAAATACAACGACTTTGTTTAC TAGTCTAAATCGACATTGATATGATAAGATTATCTTTTCGGACGTTGATG TACAAAGTATATACAACTGGTTTtctattatgatttttttcgtCCCCttc atactttctttttgtttacataGTACATGATTTGTGATAATACTGTATAA TAGCAACTTGAAGGTCCTTTTGTGTTAATCAGCAAAAAGTGCACCGAATC GCTGGGTTAGCATTTGcgtaaaaacaatagaattttactAGTGCCCAGGC TTTATGATGTTCGACCGCTGAGAAGAGGATTCGTTAGACGTTAGACTTAG ACTAGTAAATGTCTGTTATAAAAGTTCTATAATAGAACTGTCATAAGTGT CTCCTTTTATACGGTTTTAATCATATCAAGGGTAATCAGTTAGTCTGAAT TAGCCCAATATCCggtaaaatcttattttatGATTAGGATATGATGAGAA TATTTCTTTCTGCTTCCATTcctgaaaaacatctttttttgtACTCAACA GTTATTATGGGATGCCGTTATTATGGaaataaaactattttttctcGTTT ATGTAGTCGGAAGTACCAAATTGCGACAAAGACGAAGACCCGCCTGCTCC ACCCAATACAATGCCCATTGGCACCACCAacgggaaatttttgaaaaact tccgGGCAGAAGATTGGCCAAGGtattcatttttattatgtttATAACTG CTTCATTTGGTTTCCTACGGAAGTCCATTAGTGCCATTCAGGCTCTTCTC TAACTTTCTAACAAAGAAACTAAAAAGTTGATGACGaatcaaaatttaca aagaaactaaaaaaaaatgaagggaCTGAAAAATTTTATCCTCTAAGTAG CTGGATTACAAGTGCAGAAGAAAAAAGCTTACAACACCCTTAaaccaata aaaaaatttcaaaacgaaCTCAAACAGGATTTACACAAAGCCTAaaggtt tgaaaaaatgaagcttGATAATTTTCACAAAGTAATTTATAGATCGTAGA AAAATAGTCTCAAGggtacaaaatacaaaatgttAATCTTGTTTACACTC TTTACACCACGGGGGGAAATAACTTTGACTTTCTTTTTACACTAGATTTG AAGAAAGAATAGTGTTCATTCCGATTATGGAGAAAGTGGAGAGTCAGCTG TCGCTtattgaaataatgaaaaatgacgAAACATTTGATCAACTGCGTAT TGTAGCCAGCCGCTGCTTTTTAGATTGCCTCAGCTTGGTTGAGGAACTCG AAAAAGACCATTTTTACACTGATGCTCACCTAGTTGCTACCGACAAACTT TTCTCCACAATTGACTTCTTTGAAAGTGTGCGATCGAAGAAAAACTATGG AATATTGTTATACATTACATCTAAGGTTTGTGATATTGTTATTAACTGCA TATGGTATTGTTATTAACCCTATATCTGTCGACTAAGTGTATttacttgg aaattttttcacaaCCGATTTGATCTAAGATTAAAGGTTTTTTTGTCCAA ATATTTCCACTAGATAAagagatgaatttttttcttttccatttttcttc tttagttttcaaatttttgaaatgaaattagaaGCATAATAttccgaggg gtaaatcactccaaaaaaagtgtacaagatttttttgattcttgatttta ttgattttttttgatttttttttgatttctttgtttttttgcctgatttt attttattcttttgattttctttatgatttttttgattcttcatgtgatt tttttattttttttacttttttcttgattttttttatttttcatgtgatt ttttttatttttttttatttttcttgcaaTCCTTTTGATTTTTACCTGGG ACTGTTTAATCTCTGAAGAGACTCAAttgcttgattttttttattcttta gttgatttttggacctacccaggtggggtagaggtcctataaattaaccg atgtccgttcgtctgttcgtccgttcgtccgtctgttaccagcttttctc aggattggctcctttatttatatttatttatttatactgacgtcataatt tcagaATCTTTTTCCTTTTGTACACAAATCACAAATGAAAGCttcatctg gtaccagatgtagAAACTTTCTTctgacacgctaaagctcttaATGTTTG GATTACGGCATTTCGCCAGAACGCTAATAAAAGGTTTTTCCCATAGAGGT TTGGACGTCAGCCCCCGTTTTGGGGTAACTAATGAAAAAGCTAGATATGC TTGTCGGCACATCAGTCGACGACTTTTATCACTCTCCGATGGAATATTGG TCTTATCCTTTAAAGCTTCAGCATGGGTcaccgccaatacgccatcggca TGTCAGATAAatgaaagttccaatttttaaactGTCAAGAGTGCGCTCAA AGTTTTCACCAAtcgaattctttgaaaaggaatGGAAATCTtgctttttg tcaataaatacATAAACTCCTTTCAAGTCCATCATTAAAGTAAAGAATGT AAGATACAGAATTaagtttgatgaaaaaatcttttgtatttGAAATTGCA TCCTTGAAATAGCTGGAATCgtatttaatttcaaatttcaatcacGTTTT TCCCTTTAGATTTTATCTAAGGCTGGATTCTCACAAGAAAGAATCACTGA GATAAACAAAACATTCCTGATCAACCATTTAAAACCTTTTTTGGAGAAAA GGGTGGTTGATGAAAACgacacagacattgtcagagaAGAAGCCTCGCTA AAGAAATTTTTCATCCGTGCTATGGAAAATCCAAAGGTAGGCAATTTACC TGACCTGTTTTGAACTTGTTTCTAAATACTTTTGATGACAAAACTGTTCT CAACTTCAGCTGGAATCTGACAATGACTAGGTATATATATCTGTATGTCT GTCCGAAAACCtttgggcagcctggagacttcaaaaatggtccgatttgg cacacacacttgatccttggatgaatacctggccgtgttttttttcattt tttcaaaattttaattttttggggcTTTGGGACGAGTTTAACCTTTGTCA AAACAAGGCTAAAAACTTCAGGCTAGGCTTGAGACTTATGGAAAATAAtg gttcgatttggctgaaattttgctgaaattttgcacagttAACCCTTGGG TTAATTCCTGTGGGtgctattttgatttttcatttgattttttaagaaaa ccgGTTCTCAAATTTGGGCATAATACTTTAGTTTCAGGTTCCTTGACATA TTTAGAAAAAGCCTGCGTACATGAATTgctttttgatttatttattcaag actaattaagaatttaattacaaaaatgacgttttgAATCGTGAAAAGAC GTTATTAAAACATCAATCTCCCATTCTTTACAAAAATGTTTACATTTAAT GaggaaaaaagtatttttcttcCGGTTTCTTCAGTACccaaaagaaattg ttttttctgaattttttcggaaaacttTTCTTATTCAttgcatcaaaagt tacaagtaTTTTTAAATGCCAAAATCTGTGACGAATAActgacaaaaaaa cattttttttaagattttgagatgaaaagcttttaccaaaattttccgaa attctATTTTTAGCTCCTTAGTAGATTTACCCCCTGAACCAgaaagaatt ttaaatttttggattNAAaagcttttaccaaaattttccgaaattctATT TTTAGCTCCTTAGTAGATTTACCCCCTGAACCAgaaagaattttaaattt ttggattCAGGTATTATCAGCCtaatagaaaatgtataacatgttaTAGT TTTATTGGCTAAATCAGGTAGAAATTTACACTTGGACATGACAAATATGA AAAGTTCACTATGGACAGTGCCCTTAAAAACAAAGTTAGAATAATTTTAA GCGAAAAGACTTCTAAAACCCTCAGATTTTGTTGATTAAACTTTTAGCTA TCAAACTTACAATTGGGCTTACAAATGAttcaaataatataataatactG GTAATACTGAAGTTCagcccagtgcggttagcacgttcttGCGGTTAGCA tgttcaaactttttcaaaattcaaataacCTCAAATCTGCATTACTTACA AAATGGAACATTCGGTcgtctaatttcttttttccttttttttagacATC ACTTTTCGTAACTGACAACGAGAAAGCTGCTGAAACATGCAAAGATTGCA TTTCTTTTGCACTCCAACCGATTAACACGGAGCTGAAATTTTTCAAGCCG GATCAGCTCTCAAGTATTAGACAAATAATTGTAGAAAATGGATGTGGATT GACCAAACGAAGAATGATCGGTGGACCAAAAAACACCCAAATAAATTGCA TGCATATAAAGGTCGCCTTCATGAAAGAAGAATTCACTTCATTTTTTGCT GGTAAGAAACATACTGCAATCTattaatttttctgaattttctaattCGA TTATCACTACTAATTACTATCAATACTAATTTTGGCAGTTAGTCGAAAGG CTATTTCCGGCCGGTATTAAATCTGGAGTTTatcaagtttgaaaattttg gcggATGACAGAAAACCAATAATAAAAGGGGTTGTGTCCATTGTGTTTGT ATGGCAAAGAAAAGATGACACCCAGACTCAACTTGAGCTGAGCTAGAATC TGGGAATGTATGTATATATGGCTCGATAGTACCGGGTACACCACGAAAAA GTTTAACAAAAGATTTGCATGCAATAACAAGGACAATTTCAACTCACACA CTccacccacgcaatttagcagactctaaaaaaatatcattcttGTCTTT TCTTTTATTGTCAATTGCTTCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034165XLOC_034165Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054147-exon-scaffold_241-1491911889:72567..72763TCONS_00054147-exon-scaffold_241-1491911889:72567..72763Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:72567..72763TCONS_00054147-exon-scaffold_241-1510915933:72567..72763Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:72567..72763TCONS_00054147-exon-scaffold_241-1575043694:72567..72763Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:73951..74140TCONS_00054147-exon-scaffold_241-1491911889:73951..74140Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:73951..74140TCONS_00054147-exon-scaffold_241-1510915933:73951..74140Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:73951..74140TCONS_00054147-exon-scaffold_241-1575043694:73951..74140Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:75306..75465TCONS_00054147-exon-scaffold_241-1491911889:75306..75465Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:75306..75465TCONS_00054147-exon-scaffold_241-1510915933:75306..75465Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:75306..75465TCONS_00054147-exon-scaffold_241-1575043694:75306..75465Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:76284..76523TCONS_00054147-exon-scaffold_241-1491911889:76284..76523Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:76284..76523TCONS_00054147-exon-scaffold_241-1510915933:76284..76523Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:76284..76523TCONS_00054147-exon-scaffold_241-1575043694:76284..76523Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:76769..76881TCONS_00054147-exon-scaffold_241-1491911889:76769..76881Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:76769..76881TCONS_00054147-exon-scaffold_241-1510915933:76769..76881Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:76769..76881TCONS_00054147-exon-scaffold_241-1575043694:76769..76881Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:87923..88038TCONS_00054147-exon-scaffold_241-1491911889:87923..88038Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:87923..88038TCONS_00054147-exon-scaffold_241-1510915933:87923..88038Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:87923..88038TCONS_00054147-exon-scaffold_241-1575043694:87923..88038Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:88462..88741TCONS_00054147-exon-scaffold_241-1491911889:88462..88741Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:88462..88741TCONS_00054147-exon-scaffold_241-1510915933:88462..88741Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:88462..88741TCONS_00054147-exon-scaffold_241-1575043694:88462..88741Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:89976..90152TCONS_00054147-exon-scaffold_241-1491911889:89976..90152Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:89976..90152TCONS_00054147-exon-scaffold_241-1510915933:89976..90152Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:89976..90152TCONS_00054147-exon-scaffold_241-1575043694:89976..90152Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1491911889:91512..92189TCONS_00054147-exon-scaffold_241-1491911889:91512..92189Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1510915933:91512..92189TCONS_00054147-exon-scaffold_241-1510915933:91512..92189Clytia hemisphaericaexon
TCONS_00054147-exon-scaffold_241-1575043694:91512..92189TCONS_00054147-exon-scaffold_241-1575043694:91512..92189Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_241supercontigscaffold_241:72567..92189 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.79724 3.57764 2.89831 2.19209 26.0706 21.6372 24.0356 32.8466 21.2551 28.7152 18.5341 12.3579 10.3791 9.53324 7.15349 10.2181 8.57859 8.9219 1.81459 2.34706 5.13913 3.4211 4.16767 3.3193 2.42897 4.15994 5.96063 5.00238 3.36548 2.5058
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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