TCONS_00054168 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054168
Unique NameTCONS_00054168
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054168 ID=TCONS_00054168|Name=TCONS_00054168|organism=Clytia hemisphaerica|type=transcript|length=2687bp
AAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGTTTACAATATCA
AAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAA
CCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCT
TTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaa
atggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATC
CAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAG
AGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTACA
ACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAG
TGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAG
CTAATGGGAAGAAAGCACCAGCAAAGAAAGAATCAAGCTCAGAAGAAAGC
AGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGCCCCATCTAAGAA
AGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAG
AGGAAGAAAAACCCAAAGCTAAAGCAAAAGCTCCAGCCAAGAAAGCACCA
GCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGATGAAGAGGAAGA
AAAACCAAAAGCTAAAGCAAAAGCCCCAGCTAAGAAAGTAGCAGCAAAGA
AAGAATCAAGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCT
AAAGCTAAAGCAAAAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGA
AGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGCACCAA
AACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAG
CCCAAAAAACaaaaagaagaaaagaaaaatttgaaacgtAAAGCAGACGA
TTTGGGAGATGTCAATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTT
TCATTGGTGGTTTATCATACTACACAACTGAAGATGGACTTCGACAATTT
TTCGCAGATAACGAAATTAATCTTACTAATTGCCGTATTATTACTGATCG
TGAAACAGGAAAATCAAGAGGATTTGGATACGCTGATTTTGACAGCCAAG
AAGAAGCAGATAAATGTTATAAAATTGAGGACACTACTTTAGACGAACGT
CAATTACGCTTTGATGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGG
TCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCA
GTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAGATAACGAAACCCCA
ACAAAATTATTACTTGTGAAAAATCTCTCATATGACACTTATAATGAATC
TTTGATGAGTAAATTTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACC
AAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGAATACGATTCAATCGAC
GACGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAAGATGTTGATGGACG
TTCTGTAACAATCGTTTATGCTACACCAAGAGAAGATTTCAAACCAGGTA
GTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGA
GGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGG
CGGCCGTGGAGGTCGTGGTGGAAGTACACCATCAAACAAAGGAAGCATCC
AAAAATTCGAAGGCTCCAAACTGACATTCGATAATGATTCAGATTAAAGA
AACAGACAGAATGATAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGA
TCGGGATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTC
TTCGAACACTTGATGAAACTTTTACGAGGAACTCCTCTGTAAATAAACGA
GCTCAACTAATTAGCTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTA
TTGCAATGTACTTATTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTG
ACTCCCATTCCTTGCTGTCTTACAAATATATAACTTGCCGAAAAAGCTCC
TTGTGGTCCGTTacgaagttttgaaaaaacaaaatctaGCTAGCAAAAAT
TATTCTCATTAAATTTGTGTGCTTACCATATATTGACATTGAAAGTCAAC
AATTCTTTACATTAAGACTCATTGAtcacatttttatttcatcctATGTG
CGTATTAATACCTTCAAACGGGCTATAATAAATAACAAtacattattttt
ttgtatttttttcatggTTTTCAATTGGCTTGGAAacttttataaacaaa
acttttacAGGACATAATACTTTAttatacatttttaatttttgtcattt
tttggtaaaaaagacATCGGATATACGGACAGTGGTAAATAAAAGATTAC
GTTTTCTGAACACTCCACTCCCTTCAAAATGCagtacatgtttttataag
catatcttaGGCTCAGATATTgggaaaattaagcatatgtcTTGAGGAAA
TTGATCTacttaaaagaaatactttgtTGGAAGGATAATTTTAAGTAAAT
GATttcaaagctttaaaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69458..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054168 ID=TCONS_00054168|Name=TCONS_00054168|organism=Clytia hemisphaerica|type=transcript|length=11353bp|location=Sequence derived from alignment at scaffold_242:69458..80810+ (Clytia hemisphaerica)
AAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGTTTACAATATCA
AAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAA
CCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCT
TTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaa
atggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATC
CAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAG
AGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTATG
TTTTTTACATTAGATTAgacatttgatattttatgcCTAACATCAGAGTA
ACTGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTTAGGAAAAAGTA
GCTGTAACAAAAATGACTATGCTATCAACTTTGTTGGAATTTCACAATTT
GTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTGGTGTAGGCGAA
TAGGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTGGAAAGATCCAG
GCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGCCTTTAAAAAAC
AGAGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCCATGAGTCCAAT
CCAAGActgtttgaaatttattttaaatttcctATTTGGAGTTACCAAAA
TTCTTTATGAAAATCATTTAACACAAAActtgatcaaatttaaaatgtaa
aagCAGCAAATATATATACAGAATAGAACAGAAAAATGAAGTGACTGCTT
TTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaaaaatctttgaa
aattgcagataaaatctttaaaaaaacacTTGATGATCAAGAGGCTGGCT
ACGTTGAATCTACAAAATTATTTGGATAGTATTGCCAAAAAATCTGACAA
ATATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAGCGTGAGCGAGT
TGGAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAGCTCAACAAAAC
CATGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATTATTTCTGCATT
TCGATCAGCTATCGAAACATAGAACTATTTCTTTAATGTGGTTTAAATTG
TTTTTagtatttacattttttgtgaaatttctagCTTCCATTTGAAAAAG
GATATCATTTTTTTTTGAGTCACAAAAGATACGGAAATTACTACATAGCA
GTCAGCTGTAAATAATTGGAAATAAAgttaattaaattttcaaaatgatt
tagGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGT
GACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAA
TGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTACAGTACACATT
gctatatcaattttttttaaatatatcatTTAGTAAGATTTTGCTGAGGC
TTGgcttttcttatatttttggcCCTTTAAGCCTCAAATTTTTCTTATCC
TGTTCTCATggggtgtaattgaggtataTCAAgcattatacccaattttt
actactttgaccccaaaattagtatttttctTAAATATTCTAATGCTtcg
gcgattttgagcctcaaagtgtataccttattacacaaatattactagtA
TTTTATTAACACAAATTGAAAAGTTTCATGTTAATAAAAACCAGCCGTGA
TGTCCTTGaagaagcaaataaaatttgtgttaattttttgcgtgttaatt
tcaaggtcATTGAATACTTTCCTCGTAATATTTGTGCAATAAGGTAATTA
tattattttctggtttacagacattatgaggaaaagttttggacaggagg
atggaaaaaaaaataaaaataaaattaatgttttaaatttttttttagtt
tctttttaaaaatctgaattcaaaggaaataataaaataaaattttacga
aatttccTAAAGTatcaaatttttagatttaaagacaaaagaatAAAGTG
CAAGATGTTGTGTAGATTAGTTTTAGATACGCATCTACggataaaaacat
aaaaaatgtacACATAAAGACTGATATGTGTTTATGTAAGACTGAcgtag
gttcccacttaggttcccccatcccacttctGGTATGCCTATTTTTCTAT
CTACTCTTGAATTTTAACAATCACATAAAGGACCCTGAATAAAAGCaatt
acaataaaaaatcaactgcGTAACACAAGAGTTGtataatttagtttttt
tttatttacttgcCTAAACCTGGAAAGTAAgacagaaaaaattaaattaa
aaattaaaaaaattaaaaattgatagATATCTCATATAATACTCAGTACT
GGGCAATACCTAGTTAATTTAACATATGGGGTATATTTTGgggcaaaaat
ttaatttttgacaaTCTAATTTCACTTATTGGATTTTGAGGAAAGTTAGC
TAAAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAGAATCAAGCTCA
GAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGGTAA
AAAGTTTAAagcctttaaattgagaaaatgcaGATTACACACACAGATCT
AGGGGGTTTAAAAGATCTTTGTGAAactaaaaaatttttgggggattttt
tttcattcaacaaccaaatttagaaaattagtATTAATAACATTATTTTG
GAATAACAGACATGAAGACAATCCCATCTTAGTCTTCTCAGGACAAATAC
AGCATTTTCTAGAGCACAATGTTGGTTTTACTACACaaataatcatattt
ttcttctttttttgtcaaACTGATACTTTACCTTTACTGCGTTTTTGCAT
AATCAAAGATAGAAGtgcttttttgagagaaaaaaacagttttgaaaact
aattttagGTTTTAGTACTGCCACTTGTAGACCTTaagtagtaagtctgc
gaccgcagtcggaggcgacccgaaggctcctctttcgatagctgtctacc
cgaaggtaggggagggcgccactctttctcNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNggttttttcacctttcaaagtctctctaagggtc
ggaaaaatcagaaagttttaaattagtctctctaagggtcggaaaattca
ggaattttatgaaattttttgatttccagagaaaaagttgtaataaagtc
tctctaagggtatgacttttttcaaaaatcgaaaaaaaacattcaaagag
tctctctaagggtcaccttttcagcaaaaatcagtctctttaagggttgG
TTTTCAGAGGTCCCATTCgtacatacccctcattcgccaaccctagtacc
ccccggatgaacgttatgtacagaaaaattttatcaCAACTAAAAAAGTT
CTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTG
GTATCTGGatcctgaccccccccctgaccAAAAAGGGTACTTTTTGTAGT
GTTTTACCACCAAAAAGGCTGTGTTAAATATATAAAGAAAGCAGTCATAA
ATAGTAAAAAATTTATAAGTGATAACAAAACAGGCCATGTCTTAGAAAGG
TAGCGTCCATTGGTGACCAAAAAGGGTACTTTTTGTAGTGTTTTACCACC
AAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATCAGTTAATAAGTGGGCGC
TAAAAAAGGGCATTAAAAATGGTCAGACAACAGAACACATAATTGTTCTG
GGTTTCGTCGCTCAAATTGAATTGATAAAGAGGGCGAAATGTTATCAAGA
TATTCTATGTTTCTTTTAAGTGCATTCTAGACTACTCTTACTTTTGCGGG
CAGTGCAAAATGTTGTGTGGATATTTCTCAATGGTGTGTGATATGCTTGT
TTACCAGATTTGTCTTATCTAACAACTTTTTTGATTCAGCCCCATCTAAG
AAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGA
AGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGGTACAAATTAATGCAGTG
ATCTCCTTTAatgtttgaaaatctctttcaTATCATGTGATGCtgcaaaa
ttttgaagattaatTTTCACATCTAGATTGGGTTATATAACAAGAAAACA
TGAGTTAATACCTGCCTTATGGATCATATGGAACAGTGTTGTTGGGCCTC
CTAAAGTTTCCTGAATTGTCCTAAATTTTGAAGCCATCTAAAATCTCCTT
TGAAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTGATTGTGTTTAA
ACAGTAATAAATGCAAGCAAAtctctttgattctttttagCTCCAGCCAA
GAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGATG
AAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGATTATGTTGTTT
TGGTAAGAAACTAACTTTGACCTCTATTTCATATAATTGATCCTGGTACA
TCACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAAACTTTGGATTT
AGACACTTAAAGTTTTGACACTCACATGACTGATTAATATTAAagtttcc
attttcattttaatcCATTAACATCTCTTTCAGCTGAAAGCCGAAAGTCT
GAGATAGCcttgtccaaattttcgtaatCTTACTAAAACATTGCATTTTT
TAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGAC
AGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATAAT
GATCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAGGATAGGTTCTA
CAGTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCAACATCTGATTG
TACAGATTTTTctccaaatttaaatttctacAATTTTGAAATGAAGTTAA
AGAAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAAATAAAAAGCTT
TGCTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTTTTTTAAGCTCC
AGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTA
GTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTAAATAGTTTGAA
ACATGCCAAAGATTTATGAAACTCTAccatttaaagggataatcagatgg
gttgagatttttttgtttttactaaaagtcaaaaacttctTGTAACATAA
TTACCTTTGCTTTAGAAATACTtaattaaaaagattttgagGTTTGCTTA
GGAAAATAGAAGGATTCCGCATACCAAATATCCCAAACCCATAGTGTGCA
GTGgggtctgacccccccccccccccttttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccatttataT
TTCATTCCCCCTATATTTGCATTGGTTGGCAAAcaatatcatactccagg
atgcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATAGGGCATTTTTT
CCTAAGTTgttccactaaaaaggctgtttttaccaatattttagtaattt
caggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGCATAAAAAATGG
CCTGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCACTTTTCATACC
ATTCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAACGTTAAAATTA
TTGTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatgtttcaaattgt
CATTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGCATGCATTTGGT
GAACctaattttgcagaatttaatttcgcggttttagacAAACACACAAA
TATTCTCATGAATAAAGAATAACctataaaattggtctttttaggcaATA
AAGgacatattttaaacaaaacatCCTCTCAACCGCAAAATTATATTCTG
CAAAACTtccgaattttgagctgtgaaccaCTAAATGAAATCCCGTGAAA
ATATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTTTTAATTCAGCC
CCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAG
TGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGGTACAAACC
GAGGAAGTCctgttttgtaatattttgataaagaaaCCAAAGTTTTCTTG
TTGTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTCAGCTGATTTTA
TATTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCT
CTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGGT
AATTTCATTAATATCCttggtctttattttattattagtgaggttaagta
aatcagtaaaatcacgacgacgaacgaaaatttaaaatttctttcaacca
atcaaaagtAATTAGCTGATTTATTTTAGCCCCACGTTAAGTGATAGCTC
CcaagtacataggtccccccaaaaaagtggtgtTCTTCCAGGCCCCTCCG
TTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGNAAAA
AAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTCTTCCAGCCCCC
TCCGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGT
TTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCATGCTTTGTCATT
ATAAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGTGGAGGCATGCG
TGTCACATCAAATGATTCAACatgagaaaaaaaacgaaattctATCTTTT
TTAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAG
AAGAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTAACTTAAGtgtt
ttttcagatttggtTCATTTTCACCGGCTCATTTTCATGTTGAGTGACCA
AGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCTGCAATGCTTGG
GTCATATCACCAGAATGTAATATTTCTAAAACTTGCCAACGATTTTAAGA
ACTTTTACGACCTTTTATTATcatagaaaaagaagaaaagaaaaatttga
aacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAG
GAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGA
TGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCC
GTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCT
GATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACAC
TACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTA
AAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGT
TTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCG
AGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATG
ACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCT
CGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGA
ATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTA
AAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAA
GATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAG
CGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTC
GAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCA
AACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAA
TGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTAT
TAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGC
CCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTC
CTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGA
ACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTT
GAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAAC
TTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaa
tctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATT
GACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttt
tatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATA
ACAAtacattatttttttgtatttttttcatggTTTTCAATTGGCTTGGA
AacttttataaacaaaacttttacAGGACATAATACTTTAttatacattt
ttaatttttgtcattttttggtaaaaaagacATCGGATATACGGACAGTG
GTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCag
tacatgtttttataagcatatcttaGGCTCAGATATTgggaaaattaagc
atatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGG
ATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAATG
gag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054168-exon-scaffold_242-1491911889:69458..69802TCONS_00054168-exon-scaffold_242-1491911889:69458..69802Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:69458..69802TCONS_00054168-exon-scaffold_242-1510915933:69458..69802Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:69458..69802TCONS_00054168-exon-scaffold_242-1575043694:69458..69802Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:70811..70930TCONS_00054168-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:70811..70930TCONS_00054168-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:70811..70930TCONS_00054168-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:72032..72103TCONS_00054168-exon-scaffold_242-1491911889:72032..72103Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:72032..72103TCONS_00054168-exon-scaffold_242-1510915933:72032..72103Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:72032..72103TCONS_00054168-exon-scaffold_242-1575043694:72032..72103Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:75797..75889TCONS_00054168-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:75797..75889TCONS_00054168-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:75797..75889TCONS_00054168-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:76198..76290TCONS_00054168-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:76198..76290TCONS_00054168-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:76198..76290TCONS_00054168-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:78006..78098TCONS_00054168-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:78006..78098TCONS_00054168-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:78006..78098TCONS_00054168-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:78228..78305TCONS_00054168-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:78228..78305TCONS_00054168-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:78228..78305TCONS_00054168-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:78813..78878TCONS_00054168-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:78813..78878TCONS_00054168-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:78813..78878TCONS_00054168-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1491911889:79084..80810TCONS_00054168-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1510915933:79084..80810TCONS_00054168-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054168-exon-scaffold_242-1575043694:79084..80810TCONS_00054168-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69458..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.9459	8.86154	1.15882	0	195.328	144.059	89.0728	109.513	59.1773	54.6359	91.6994	66.9727	144.83	144.592	44.7132	70.5609	30.9986	39.2955	15.972	19.0046	44.4852	41.7809	22.168	22.3092	123.55	148.384	22.3958	31.6414	18.4799	20.6116
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054168 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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