TCONS_00054252 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054252
Unique NameTCONS_00054252
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3267

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054252 ID=TCONS_00054252|Name=TCONS_00054252|organism=Clytia hemisphaerica|type=transcript|length=3267bp
GTTtggaattcaaaataaaaaacaaaagaaaacaacaaattacGACAATA
ACACAACACGCACCAACTTATGACAACAAAGCACAATGTCGGCAGCAACC
ATTGCATTAAGTGCATTACCATCCATGTTGAATGGTGATTTATCGACTCC
GTCACCACCACAAATCGCCGTCATTGACGATCATTACATTGATTCTGACG
AAGTTGAAGAGAACCAATCAACGAATCATATCGACAACATTGAAGACGCA
GACCAAACGTCACGTGATTCTCCATCTCTGGTCGAGCGACCTTCCATGTT
ATCCGATCGACCTTCGATGCTATCGAAACCGACATTTGTAGCACGACCAA
GCATGTTAGGAGAAGGAGCAGAAGATTTATCCCGTGATATGGACGATGAT
GACTCCAGTTCACATGATGGAACCTCAAACAACAACACCGTTAAAATCCC
ACACAAACGTGGCAAACGAAAGAAATATCAAAAGTACACGCCTGAAGACC
GAATAGCTATCGGCAAATACTGTTTTGAGCACGGACCAGCTGCTGCACGT
AAAGCCTTTCAAGGTCGCTACCCAGAGATGAGTGAAAGTGTGACAAGAGG
TTTTCGTGATAAATACAAGCAGATGATCGGGGAATCAGCTGTCTATGAGT
TCGAGCAAAGGAGACAGAAAGAACTACAGAACAGTTACACAGCTCCTCCT
CGTGGTCGCCCACGCAAGTACAAAGTCACCGATGAAACCAATAAACCATA
CAATGGACAGATATCACCTCCGCTCAATACACAAGTTGTAAAGGACGAAT
ATGCACGGTATCATCAACGAAATGGCGAACGCCCGGCATTCCCATTAGAA
AGCACCCACAGACGCCCGGCCtttcatgaaattgaaaagGATCACCCACG
ATTCATGAAGATGACATTAGAAGATCAATTAAGAATCGGTCGATATTGCT
CGCATCATGGCGTCATGAAAGCATTGCAAGAGTTCCATAAAGAATACCCT
GGGATCAGCGAatcgatcattttcgatttccacAAACAATATCAACGCCA
CAAACAGGAGCAAGACCTTCAACAGAGACGCGCAGGATATCGATCACCAC
CCAACACGCATGTGCATGATTATCCTACGCAACCACAAGTGTTTGTCTTA
GAAGGTGATCAAATGACAGGACCAGGTTCGACAGGTTCCGCCAAAACGAA
TGGCATGGTTTCACCACGTGGCGATGAAGAGCGAACATCTAATCACAGTT
CGCCTTCTGTTTCACCAAAACAACATCATCCACCAGAAGAAAGAAGACTT
TCTCCTCCTTATGCACGTTCACCACGAAGTGAAAGTGAGTCTCCACCTTA
CAGACCATTCGAACATCCACCTCATCAAAAAGAAGAAGGTGTTGAACGTC
ATCGCTCACGCTCGCCACCCGTGCCCCGCCATCGATCTCGATCTCCGCCT
CACAATAGATCACCATCAATGCGCTCTTCTCCGAGCATTCCACATAACGC
AAATTCCGCCATTACATCACATCCATCCGTAATTGCACCACCTATCATAC
ACTATCCAAGACCGCGGCCACACTCACCTAGACATCATTCACCACCGCCG
ACTTTCAACGGTCACCTCCATCGCTCGATTAGCGAAAACGCCCGACTCCG
TGAATATGACGTAATACCACCACGCATAAATGGTTACNCGCATCATGGCG
TCATGAAAGCATTGCAAGAGTTCCATAAAGAATACCCTGGGATCAGCGAa
tcgatcattttcgatttccacAAACAATATCAACGCCACAAACAGGAGCA
AGACCTTCAACAGAGACGCGCAGGATATCGATCACCACCCAACACGCATG
TGCATGATTATCCTACACAACCACAAGTGTTTGTCTTAGAAGGTGATCAA
ATGGCAGGACCAGGTCCGACAGGTTCCGCCAAAACGAATGGCATGGTTTC
ACCAAGTGGCGATGAAGAGCGAGCATCCAATCACAGTTCGCCTCCTGTTT
CACCAAAACAACATCATCCACCAGAAGAAAGAAGACTTTCTCCTCCTTAT
GCACGTTCACCACGAAGTGAAAGTGAATCTCCACCTTACAGACCATTCAA
ACATCCACCTCATAAAAAAGAAGAAGGTGTTGAACGTCATCGCTCACGCT
CGCCACCCGTGCCCCGCCATCGATCTCGATCTCCACCTCACAATAGATCA
CCATCAATGCGCTCTTCTCCGAGCATTCCACATAACGCAAATTCCGCCAT
TTCATCACATCCATCCGTGATTGCACCGCCTATCATACACTATCCAAGAC
CGCGACCACACTCACCTAGACATCATTCACCACCGCCGACTTTCAACGGT
CACCTCCATCGCTCGATCAGCGAAAACGCCCGACTCCGTGAATATGACGT
AATACCACCACGCATAAATGGTTACGCGGCTGTAGAGTATCCTTATGATC
GCAAAGATTTGATTGGGAAACCGATTGGCAGTATAAACCCACAAAGTGGG
CGAAGCAAACGATTCAAATACCAAAAATATACACCCGAAGATCGGTATAA
TATCGGGAAACTTTGCAACGATATCGGATTAGGTGCTACAGTGAAAGTAT
ACAGAGAACAATTTCCACGCTTGAACGAAAGCGTTGTACGCACGTTTCGT
AATAAATATAGAGAACTTTTAGAGAAGGGAGGAGGTATCCCAGCTACCGA
GACCATCGAGCGCAAGCCAAGCCGTCGATCAATATCAACTTTAATTGAAG
GTGAAGTTGTCTCACAACTTAAACAATTTCATTCTTCACAAATTGAACTA
AGTGAGAATTTTGTGATTGCTGTTGCAGAAAATATCATGGCAACCAAACA
CCATAAAGAGGCTGGAAACATTAAAGGAATTATTACTAAAGAATGGGCAA
ACTCGTTGCTGTGGAAACATAAATTGTTAGACAAACCATCTGGTAATGTA
CAAGGGGTATGTTGTGAACGATGCAAAACTATTTTGGTATGTCCGAAATG
TCCAAATTAAAACTTTAACTGtccaaaatataaaatttagtTTTAGTTTC
TCATAGTTATATGAtaaatagatgttttttttatttttatagagTTTTAT
TCTATATTAGcaatttttcaactcaaaagaattgaaactttGCGACAGGG
ATAGATCAACTAGGTTTGAATTGAACTTTTTAGTGTTTGGTAAATACCGT
TCCATAAAGAAGTATTTAGACGAAGCTGTAAATAATTTCTAATTGCTTTT
GAATTCAAGGTTCgcaa
Run BLAST on NCBI

transcript from alignment at scaffold_242:1169943..1186812+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054252 ID=TCONS_00054252|Name=TCONS_00054252|organism=Clytia hemisphaerica|type=transcript|length=16870bp|location=Sequence derived from alignment at scaffold_242:1169943..1186812+ (Clytia hemisphaerica)
GTTtggaattcaaaataaaaaagtaggTATTTTAATAGAATTCTGACAAC CTTTATCCTTTTactattttgacttttaattctcttttttcactgttttt tgttaattttgtttcTATTTCGGTGTTTTTGCCGGTAAACCACTGTGAAT GTTCATTGATGTCTTGTAATATAGGGGCTTAAGAacaaaaattgcacaaa aaggGGTTTGTTTTAAGCATAGACAAAATGTACGAccaaataaaagaata acatcttttgattaaatgacatgaaaaatttaatcgaattttttttttNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNcactaaaatttggtctctctaagggtcggttttcggaggtcccgtcc gcacatacccctcattcaccaaccctagtaccccccccccgggggcttCC ATAGACAAGGAAGGGCTCATGATATTTCAAGCATCACGGGAGCTACCTAC CATATTGTTTTCTTCTGTATAGATTGTTGACACTCTTACAGTGATACAAA CTTTCCGGTTCGGGCATTTTAGGTGCATTTTAAGACGTTTTAGTCAACAG TTTTATAGGACTTAAAAGGAGTTTTCGTGCATGGATTCTCCTGAATTCAA CATTGAACGAGTATGTTTTTCCATCTGAGTCTTCAGGACCTGTAGCTATG CTACCAATCACAATTTTTAACTAGctttttaagctaaaaatgaCAAAGTG ATTCAAATTATTCCCGTTCTGTCATCAAACTTAATATAGAGCAATGACTT AAAAATAGCTTACGACTAGTCGTTCAATAATTACACCGCCCCTTGTGTCA GAgacatttggaaaaaataaaattgtatgTTGCAATGCTTAAGTAGGTAA GAATTGATCTAAAACAATCAAATTTTAATTGAAGGTTTTATAACCTCGCA AAATGTAATtcatttttggccattttttttatacaaattaacAAAAATGT GATCCTCCCCATATCAATTTGCTGGAGCTATTCGTTCCATTAGTATTAAT TAAAGACCAATTCTAGACTCATTAATCTCATGCTGGGATCAATATTTTTG GCGTGCATTTTTGTTTACGTGTGTGATCTGTGTTTGTCTCTTTCCTTCCT TCTTCTTGCTTCCGGGATACCGCATACGTTACGTAGAGGCACCATGGCTT TTTCCTCTTATTTCCCGTTTTAAACACAATTAAAATAAGAACGTCTACTG TATCAAATAATTAAAGATATATCATGCCGGGAGTGCTGAACAGAGGGTGA GATGTCAGATGTCAAAAGTTAACTATAAATTGGTCAAGAACCATGTCCAA ACTATAGAACGAAACTAACGAATCTAAAAAATGGAATGTGAAATGTGTTA TTCAATTTTGGTTCGATACACCTTGATAATCTTTAAAGACTTCAAGGACT ATCATTAAAACTTTATGCACCCCTTTATCTATCCCCATGTAGGAATTGGA AGATAACTGCACGACAAACTGAAGGTATCACCATTTTGTTTTcacccagc tggtacacaacgttttttcaacgtccACCTAACGTCATATGAACGtcgtg aacgttagataaacgtcgaaaaaacgttgtgtgccagctgggcaagGATG ATTTTCTTGCTGTGTCAATTATACCCAGGGGAATCTTTTAAACTAAACCT AATATCTacttaaatttttaagaaattcaTTGCTGTTTTGGAGGTACCCA GAAAGTAGACTTGAGGCACACTTTGGTACAGAATACGAGGACACTGACTC TGTCGATAATgttttttagtcaaaatataAGTTTTTAGGGTTAACAACTT TAGGAACATTTCCACGAAAAAGCAAAGGAAAAATACGTAAGTTTGGATGA AATACAGTAGAAGTGTAATACAAGTCCCGTCTGTTTATCGACTTTAAAGT CTCTCTAGTAACAAATCTTATCATTTTAGGTTTTTGGCACCAACCTTTTT AAGTACTAAGAGTGCAATCAATCATTCAATTAGTGATTTTTCACTTAATC TTTTACCGTTTGctttttaagaagaaaaaacaCCAGTCGCCAAATTTATC TCTTTGATGCGCTAGTTtcgctgaaaaaaaaaataacaaaagagaTAAAA CTTCGCGATGAGTGTCTGCAAATATCTTTAACTGAACAAAAACGGTACAA AATTTCCTGCACAGAGTTTTGTTAAGATAACAGATTTCGTTTGATAACAG CCGAATTGGTTGAAGATTAAAAAATGGTTTAAATTTAGGTTAGGTGATAT TAGTAAAATGTTTCGGTAATGCTATTAGTAAAATCGTTCATTGAATGCGC TTTGACTGAAAGAATCCGgtgaattttttttagctaATCAATTTGTCTAT TCGCTTATTATTTCTCTCTTGTTGCATTGCAGCATtagataaaagatttt tttctgctTTCTTTTAGGAATTAACGgatcaaaaaagatttctaaTTGCA TTCAAATGACACATACCCTTAAGGTATTTTTTGTTCAAGGCAACGGGACT CTCAAcgggattttcaaccgttattaaaTCTAATTTTGAGGTATATCTAC CTGCTTGGTGTTACTTTAATGAATTTAAATGGCAATCAAACTAAACCAAA CTTACAATCCCTTTCGTTCATTCACTCCAATAAAACAAAACGAGAATTGT TCCCGTTATATTTTTCCTGTCCTACACATTCCTAAGTTTCGAAATAAGAT TTCGAAATAAGAGTTTTTTTATTGTTAGTACTTTTTAGTCGATTTCAAAC ttcacacccctgtatcactgCTATTCCCAAGTTTAGTTGGATATGGCGTT GCTCGCCCTTTCATACCACCTTTTTTTAGCACAGCTATAAAAACGACGAT CGCTAATTGACATTATAAGGGCTTGAAGTCGGGAGATTTTGCATTAAAGG GTGGGTTTTATAGTTTTCCACAATGGCATACTATAATCATGTCAGATGAT GTTTAAGaccaaatttttaatttaagcCGAAAAATTTGAGTGAAGTTTTG TGTCAAATGACATGGTATTAAATTCAACAGCGCAATACAGTGAAATAAAC GGAGTGTGGATTAACCGTTGgaagttttttttctcttgtatgaaaattat ttttgggagGATTAGCAGAATACTCTGGACTGATACCCAGTCTCTTTCTT CCGTTCGATGATAAAGTTAATTCATTAGGATGGATCGCATTTAATTAGCT TttatttttgtcatattttttataatgcTACCATGACTCTCCATTTCAAC AGCATTAAGACTAAAGTAATTggttaaaatacaaaaaataggAGAATTTA ATTCGTTAACAATCGAGTATCACACACAACACAacattttgcaataaaaa catggaaaaaatagatttttttaatcTATTCTTTTGAAACTATCATGCAT TTTTTTGTCAGCGCTaaattaagatgaaaatgtaaagataagaaaaaaag aGCATTTTTTAACAAAAGGACTGAAAATAGCCGCGATTTGTAAGTAAGAA GGGAAGGGAAATCGTCAAATTATATGAACGGTATTAAAGAGGGTTTAAAA ACTTGCTAATCAGTTCTTTTATAGAAATTCTTTTCTCATTATTGCCAACC ACTCTTTTTAGCGCACAAAAGTTCTTATTGTCATTCGGGTAACTTAACTG GTCtgtttttctattaaaaaaacatttttttaatattcttttttttttgc gttttattGTCAAATTGAGAAAATCGGACCGGGGGATTTGAGcctttttt gatttcatttcatttgaCGATGAggttatttttgacttttaagtGAAGTA ATGAATTCGTTTAATTCATTGATGGTAGTGATGTGAAGTGGAGGTCAAAA AGCAAAAAtgttttgagacagactttatgtttaTCGGTTAGTAGTTTGCG ATGTTCTTCACTGATATGTTTTTTCCTTATCTGTGCTGGAAGGAGAGCAA AGTGCATTTAAAGGACGAAGTGAAACTTTAAGATTGATAGATACGTTAGT CAAagtcttgaatttgaaaaaagagtACTTAAAAACGCAAAGCCAACTTT TATTAGAATTCACGGTTTTTTTCATTGTAATGTAGAAAAAAATCCTAGAC ATAGTTATCAACAAGGATTTTTTTTCTGCGCTTTGGAATTTAAGAACGTG TTAACATTTTCTCTTTCGTAAACTTGAGTCGTATTCGcgttttgttttta agtttcttatttattttttagcgAAATGAAAGGAAAATTCATAAGATGTA TGACATTTGGTTAAAAAGtcgtgaaataaaaataaaaagaaggaATAAGG ATAAAAAAAAGTGGTTTTGGAAATANAACTTGAGTCGTATTCGcgttttg tttttaagtttcttatttattttttagcgAAATGAAAGGAAAATTCATAA GATGTATGACATTTGGTTAAAAAGtcgtgaaataaaaataaaaagaagga ATAAGGATAAAAAAAGTGGTTTTGGAAATAAAGTGAGGTTGGAAAAagga ttttttgcttaaataaagTGTTTTTTACCGTATTTTAGTTATGTTGAAGG AAAGAAATTAAAGTTAagagctaaaatcgcttaataaCCTGGATTAAATA GCTTTCCTTTGAAGATGTCCCTTTCGCCTGTGatgaaatcaaatgaaaaa tttttaagtCTCAAAATTTTTTCGTTCTTCATACTTAATTTcgtagattt ttttctttcgccGTGTTTTTTTTGTAcgcttgaaaaagtttttttttttt ttatgaaaaaaatattctcgatatttttatcatatGTAAGGGaattttta acaagtttttaaagaaagtcTATTGTAAGATAAAGTAAAAACTGAgtgaa caattttagtttttgaaTCATCACCATCgtaattttattgaattttgaga atttattatttttatgtttagCTTAAATCTCTCTAACTTTTTAATAAACA CCGTTTTTTATGTGGTGTTATAGATAAGTATACTTTAAAatcgacttttg aaaaaaagtagaaTTAGTCGCGATGAcaataaaaaatgcaaaattcaTCT AAAAGGccttgattttgaaataccgCTATTTTCACAAGtacaaaaaagga aagaaaatcattctaaataaatcaaaatctttttttgaaataaactttTA TTACCTTTATAATTAAGGTTTAAACGTCATTTTTGTACAGCATATTCTGA AAAGAAATGACCTTTGGTATAGCTTAGGttgattaagtttttttttgctt ccttaaatcaaaagaaaccctcacaaaaaagctaaatttaaACCTTTCCT GTTTAATTGAAGAATAAAAGATGCATCCCTAAGACTAATTAACATTTTCG AGAAGCTAAATAATTGCTCATTAATTAtatcaaacagaaaaattaCTTCC GATGCTTTTTTAAATAAACAGGCAATGCTGGAGGCACCACACCAGAAGCC GAAATCACTGTCTACTATCAAAATTAGCTCTGATTAGTTATGTTCGTATT TTTCATATTgttggaaaggtatttttaAGTGGATAGAAGTTATGGTTTAT CTTTCGTATTTTTTATGTTGTTGGAAAGGTAGTTTTTAGTGGATCGAAGT TATGGCTGTCACTTTCATGTTACTTTGATCATCAGTTGgagtttttactt taaaaattgaaatttatagCTCATCAATTTGGagtttttgctttaaaaat tgaaatttatagCTCATCAATTTTGAGCTCATCTTGTCTGCAAACTCAGT CTCCTGCCTTCCTACTTTGCTAGTGTCAGTCTTCATAAAAGGGTGTACTC GTATCTGATATAGGATAGGGGGCAAATGAACAGGGGAGACGTGAATGAGA AAGACTGGATACTCAAGGACAAAATTCATGTCATTTTCTTTGACAGGATA TAATGCCGTTATAAATTAACTTTTCGAGGATTCTGTTTTAAGCAACTAAA CATTTTACTCCTTTCCACAGTAATGAgagaagtacacgttttttttatta taagaacaaattatataaaaacataaggcttcgactgccaaaatgttaag gacaagttaagaacattttaaggctttatgaactcaaaaacacccaattt cttaggaaaatgggtaaaaagggtcaaaaaatggcgaaaataagaacata aaagaacatttttaggcttaaaattcaaaaagttaaaaacatcaaCAACG TGCAATCAGCAAAATCATCAGTTAAATATTTTCCAccgaatttttttatt ttatttttttattagtaCTTGTTAATTGATTTAAAACtctacacccctgt atcactgaTATCTCCAAGTTCAGTTAGATATGGCGTTGCTTGCCCTTTAA TCGCCACAacacttatttcccattcagaaCACGTGACTCGTGCGTTTTTC AAATAAAGGAGCTTCTGTTCTGCGGTTGCAAACTTCGTTTTACTtggaaa tttaaaataaattccCGAATAAAATAAATTCACCTCAAAAAGAGGCAAAT TATTGTTCATTTTAAGATGTTTTAAGAGTTTAACGAGTTCTTTACGGTCT TTTTAAACCCGACGAATGTAAAATTTCATGgagttttttgttgttgttca tTAAAAAGGTGAATGGTTGAATCAATAAAGGTCTTTATGTGGAATAAAAA GGTCTCAAGGTGTAAAGTAAAAAAGAAGTATTTTACgaaatttttactgt tttgcAAATTCACTTTGGAAGGTAAAATTCATGCTTCCAGTGCAAATGGC ACACGCACTAAGTTTTGGTACCGTTGTTGTagtaaagtttttgtttgata gTTTTTTTGTGATGATATCTTTTAACAGACAGACcctctttttcattttg tattttcaataatatttctatttcaaaaatttgcgattttttggtttaat tttgaaatagtttCTCGGTTTAATACTTTGTTTCAATCTTCCtcgaaaat attttaatatatgttttccttttcctttctAATGAAACTCTCTTTTTTTT ACGTGTAAtaatttcccttgtttttgtttttgtatattttttcagTCTTT TCGCCCAGCTGGAAGCCTTAATACTGGACAAGTATTTTTCTCGTTTTTTG gtctaaattttctttcttttatatCCTTTATATCATAAAAATGCGGAATA AAATTTAAACGATCTACTTGTAGTATTTTTTTTGCCAATCACTGTTGAGT TTAGAGTAGCcccttcatcaaattttaatgaGTCTATGAAAAATTCGCGT TTTTAGTACGGTTTGCATAGTTCCGTTAAAAAAGCTCGCTCTGTATAAAA AGGATGaggaagtaaaataaaaatattataaaagaaacatttaaaagTAG ATTTTAGTTCGAGGGAAGGCTTTATTATCTAGAAAAAAACGCAAAGAGAT TTTTTGGTCGTATTTTGTACTTCAAAGGTAAAgagaatttaaatttaaat ttcttcttttattgtCTATGTTCACTAACGATTTTTTTGCGTTTACTAAA AAGTTGACTTGGGTATAAATTATTGATCACCAAATCTTTAAGTattcgct tgttttttttgtcaaccTTAGATCTCAATTTTTCAAGTATCTTCTCTCGA GCAAGCTTGACTTAAGTTAGAAATTTTACTGTCAGGCAAAAAGCTTATTT TATGGAATTTGTCatataaaagagaaaaattttgcGGTCATCTCAAATTT AACTTGACGAAAGTTTTGTGATAGAAAAaaagtgatttctttttttaaat tagatttaaaACCCCTTCTGGTTTTCAGTTTAAAGGTAAATTGATATCGA CAATAAGTTTATGCACCAAGATACCGAATTTCAACAGTGTGTAGGCtatt gaaagaatttttaatGCAGGCTATTGTGAGGTCAGGCTACATATTAATGA TATGTTTGGCTTTGGTTTAATTTTGAAAGGAGGCAACCATTGAGTTTATT GGTTAATTATCGCTTAATTTGCCGTTACAGTCGCACAATATATTTTCAAT TGTTCTTTAGAAATTTTACGGTTATAAACAAGGTATTTCGATGTTTAAAT TTGAATTGGTTTTTCTCAAGCTCCGAGATGTGACAACGTTAGAACGGAGT AATACGAACAAAGTCTCTGAGATATGAAAAACTATATTTTCGCGGTTTTG AATAGAATTACAGTTTTCTATAGAGCAAGTTAAGTCAATTGATACTTTTT ATGAATTCAGATTTTAGTTGAATTGAATGTAGTTCATATTTCAGCATATT GTATTCTCGTTTCGCGAAAATAATATCCTCTAAAAAGCCACAGAGATTTT AACTGTAATGGAATTTAACtatcttttgttgaaaaagcGTAAAAAAACGC GAATATAATAAAGTCTTTGTTATAAAGATTCTTTGTCTTTATGCTAAAAC AATCCAATAACGATTTGTTAACTTTTTTGTACTATtacagaaaaagaaag aaattgtcgaaaaatttcgtggtttttttttgttatgaTGAAGGAGCGTT AGCAGTAATCTGCTGTGGAAActtcttttttcaatctttgctaatttgtt aaaaattgaacGTAAAAGAGGGAATGAACaaagaattgttatttttttcg ctgtattttatttttttgatattatCACTTATCTGGTTTTCACAAAACTA AAAAGAAATGGGGTCGCTAAAATAAGTTGAACTAAACTCGAACAcaagaa atgaatttttatttagttttttacGTTTATCTTCAAGTAAAAACCACAAT CGCAAAATAAGAGAAATTTTctcgattagaaaaaaaaactgatgGTTGTT GGTCCTCTTGATTCTGATTATATTTgaggatgggaaataagtttttctaa aagaccaaaaaagagggagtttttactaaaattatttCGCTAATTTCCTT TTGGTTTATAGGGTTGATTAGATCGTTTAATGAAGTGGGATGTGATTAAA ATGGTCTTGAAATGACCGTCATGACggttttattcaattttatgTGTGGC CTTGGTTGAGGGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAA CTGATGGTTGTTGGTCCTCTTGATTCTGATTATATTTgaggatgggaaat aagtttttctaaaagaccaaaaaagagggagtttttactaaaattatttC GCTAATTTCCTTTTGGTTTATAGGGTTGATTAGATCGTTTAATGAAGTGG GATGTGATTAAAATGGTCTTGAAATGACCGTCATGACggttttattcaat tttatgTGTGGCCTTGGTTGAGGGTGACACTTTCTTCAGATATTCATGCC TGCTGCCAAAAGATGTGGAGATTTTGAACGCAATTCTACTTTTCTGACGt aattctctttttttctcgTTCACAgcaaaagaaaacaacaaattacGACA ATAACACAACACGCACCAACTTATGACAACAAAGCACAATGTCGGCAGCA ACCATTGCATTAAGTGCATTACCATCCATGTTGAATGGTGATTTATCGAC TCCGTCACCACCACAAATCGCCGTCATTGACGATCATTACATTGATTCTG ACGAAGTTGAAGAGAACCAATCAACGAATCATATCGACAACATTGAAGAC GCAGACCAAACGTCACGTGATTCTCCATCTCTGGTCGAGCGACCTTCCAT GTTATCCGATCGACCTTCGATGCTATCGAAACCGACATTTGTAGCACGAC CAAGCATGTTAGGAGAAGGAGCAGAAGATTTATCCCGTGATATGGACGAT GATGACTCCAGTTCACATGATGGAACCTCAAACAACAACACCGTTAAAAT CCCACACAAACGTGGCAAACGAAAGAAATATCAAAAGTACACGCCTGAAG ACCGAATAGCTATCGGCAAATACTGTTTTGAGCACGGACCAGCTGCTGCA CGTAAAGCCTTTCAAGGTCGCTACCCAGAGATGAGTGAAAGTGTGACAAG AGGTTTTCGTGATAAATACAAGCAGATGATCGGGGAATCAGCTGTCTATG AGTTCGAGCAAAGGAGACAGAAAGAACTACAGAACAGTTACACAGCTCCT CCTCGTGGTCGCCCACGCAAGTACAAAGTCACCGATGAAACCAATAAACC ATACAATGGACAGATATCACCTCCGCTCAATACACAAGTTGTAAAGGACG AATATGCACGGTATCATCAACGAAATGGCGAACGCCCGGCATTCCCATTA GAAAGCACCCACAGACGCCCGGCCtttcatgaaattgaaaagGATCACCC ACGATTCATGAAGATGACATTAGAAGATCAATTAAGAATCGGTCGATATT GCTCGCATCATGGCGTCATGAAAGCATTGCAAGAGTTCCATAAAGAATAC CCTGGGATCAGCGAatcgatcattttcgatttccacAAACAATATCAACG CCACAAACAGGAGCAAGACCTTCAACAGAGACGCGCAGGATATCGATCAC CACCCAACACGCATGTGCATGATTATCCTACGCAACCACAAGTGTTTGTC TTAGAAGGTGATCAAATGACAGGACCAGGTTCGACAGGTTCCGCCAAAAC GAATGGCATGGTTTCACCACGTGGCGATGAAGAGCGAACATCTAATCACA GTTCGCCTTCTGTTTCACCAAAACAACATCATCCACCAGAAGAAAGAAGA CTTTCTCCTCCTTATGCACGTTCACCACGAAGTGAAAGTGAGTCTCCACC TTACAGACCATTCGAACATCCACCTCATCAAAAAGAAGAAGGTGTTGAAC GTCATCGCTCACGCTCGCCACCCGTGCCCCGCCATCGATCTCGATCTCCG CCTCACAATAGATCACCATCAATGCGCTCTTCTCCGAGCATTCCACATAA CGCAAATTCCGCCATTACATCACATCCATCCGTAATTGCACCACCTATCA TACACTATCCAAGACCGCGGCCACACTCACCTAGACATCATTCACCACCG CCGACTTTCAACGGTCACCTCCATCGCTCGATTAGCGAAAACGCCCGACT CCGTGAATATGACGTAATACCACCACGCATAAATGGTTACNCGCATCATG GCGTCATGAAAGCATTGCAAGAGTTCCATAAAGAATACCCTGGGATCAGC GAatcgatcattttcgatttccacAAACAATATCAACGCCACAAACAGGA GCAAGACCTTCAACAGAGACGCGCAGGATATCGATCACCACCCAACACGC ATGTGCATGATTATCCTACACAACCACAAGTGTTTGTCTTAGAAGGTGAT CAAATGGCAGGACCAGGTCCGACAGGTTCCGCCAAAACGAATGGCATGGT TTCACCAAGTGGCGATGAAGAGCGAGCATCCAATCACAGTTCGCCTCCTG TTTCACCAAAACAACATCATCCACCAGAAGAAAGAAGACTTTCTCCTCCT TATGCACGTTCACCACGAAGTGAAAGTGAATCTCCACCTTACAGACCATT CAAACATCCACCTCATAAAAAAGAAGAAGGTGTTGAACGTCATCGCTCAC GCTCGCCACCCGTGCCCCGCCATCGATCTCGATCTCCACCTCACAATAGA TCACCATCAATGCGCTCTTCTCCGAGCATTCCACATAACGCAAATTCCGC CATTTCATCACATCCATCCGTGATTGCACCGCCTATCATACACTATCCAA GACCGCGACCACACTCACCTAGACATCATTCACCACCGCCGACTTTCAAC GGTCACCTCCATCGCTCGATCAGCGAAAACGCCCGACTCCGTGAATATGA CGTAATACCACCACGCATAAATGGTTACGCGGCTGTAGAGTATCCTTATG ATCGCAAAGATTTGATTGGGAAACCGATTGGCAGTATAAACCCACAAAGT GGGCGAAGCAAACGATTCAAATACCAAAAATATACACCCGAAGATCGGTA TAATATCGGGAAACTTTGCAACGATATCGGATTAGGTGCTACAGTGAAAG TATACAGAGAACAATTTCCACGCTTGAACGAAAGCGTTGTACGCACGTTT CGTAATAAATATAGAGAACTTTTAGAGAAGGGAGGAGGTATCCCAGCTAC CGAGACCATCGAGCGCAAGCCAAGCCGTCGATCAATATCAACTTTAATTG AAGGTGAAGTTGTCTCACAACTTAAACAATTTCATTCTTCACAAATTGAA CTAAGTGAGAATTTTGTGATTGCTGTTGCAGAAAATATCATGGCAACCAA ACACCATAAAGAGGCTGGAAACATTAAAGGAATTATTACTAAAGAATGGG CAAACTCGTTGCTGTGGAAACATAAATTGTTAGACAAACCATCTGGTAAT GTACAAGGGGTATGTTGTGAACGATGCAAAACTATTTTGGTATGTCCGAA ATGTCCAAATTAAAACTTTAACTGtccaaaatataaaatttagtTTTAGT TTCTCATAGTTATATGAtaaatagatgttttttttatttttatagagTTT TATTCTATATTAGcaatttttcaactcaaaagaattgaaactttGCGACA GGGATAGATCAACTAGGTTTGAATTGAACTTTTTAGTGTTTGGTAAATAC CGTTCCATAAAGAAGTATTTAGACGAAGCTGTAAATAATTTCTAATTGCT TTTGAATTCAAGGTTCgcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034223XLOC_034223Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054252-exon-scaffold_242-1491911889:1169943..1169964TCONS_00054252-exon-scaffold_242-1491911889:1169943..1169964Clytia hemisphaericaexon
TCONS_00054252-exon-scaffold_242-1510915933:1169943..1169964TCONS_00054252-exon-scaffold_242-1510915933:1169943..1169964Clytia hemisphaericaexon
TCONS_00054252-exon-scaffold_242-1575043694:1169943..1169964TCONS_00054252-exon-scaffold_242-1575043694:1169943..1169964Clytia hemisphaericaexon
TCONS_00054252-exon-scaffold_242-1491911889:1183568..1186812TCONS_00054252-exon-scaffold_242-1491911889:1183568..1186812Clytia hemisphaericaexon
TCONS_00054252-exon-scaffold_242-1510915933:1183568..1186812TCONS_00054252-exon-scaffold_242-1510915933:1183568..1186812Clytia hemisphaericaexon
TCONS_00054252-exon-scaffold_242-1575043694:1183568..1186812TCONS_00054252-exon-scaffold_242-1575043694:1183568..1186812Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1169943..1186812 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.147933 0.0469944 0.208742 0 0 0.000328505 0.970721 0.70877 0.771237 0.810646 2.50842e-06 1.02667e-07 0 0.000303332 0 0.0047441 0.201611 5.05019e-08 6.00412e-09 0.383715 0.00296573 0 0 3.67182e-05 1.19088 0 5.44956e-10 0 0.00590714
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054252 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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