TCONS_00054255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054255
Unique NameTCONS_00054255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length764

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054255 ID=TCONS_00054255|Name=TCONS_00054255|organism=Clytia hemisphaerica|type=transcript|length=764bp
CTCGTCCCACTGGTAGTTACATATTTTGTAATAAGTTCAAATAACCTTTG
AGACTCAAACTATCCCTGAACGTCACAATGTACCAGTATAACTAGCACGC
ACCATCACGATTTCTGCAGAACAAATGTCATTCTGAACTCGTCGACTCTA
CACACAGAGAGAAAGATTTTTACCATAACCACCCAAAGATAATGTCCTAG
GTTTGCTTCGGATAGAACAACACCAGTAGAAGCAAACATGCAGATTATCA
AACAACATAAACAGAGTCGAACTTTGCgatgaaaatttagcaaaagaaAC
AAACCTTGATTTGTGTCGTAAGCCTCAAGACTTTACACTCAGTTTACCCT
ATCCTAACGGCTTTATTGCTGGAAAAGGAACCATACAATCCTGGCAAATA
CTTCGGAAAGTCAGGAATGTTTTGGAAGTGGTACTGACCATCTTGATAAA
AATTTGAGTGCAAACAATCTCCGCTCATCACAACCGGTCGTGTCGAAAAC
AAATATAATGCCAATGATTCCTCCAACTTACTTTGCAGCTCAACTTCAAG
CAGCTCAACGCCGAGCTCAAGAAGGCATCCAAGCTGTCCCAAGTTTAGAA
TCAGATGGAACTGTCTCCCAACAACACCAAGACAGCCTTTTCTCCGAATG
TGTCCTTGATTTgtctaaatctttaattttgatcaCACCAGGCAGAGGTT
TGTGCAACATTTCTGCGTCTCTGGCAATTTTTTCGTGAAagatatcatca
aaaaattcccGAGG
Run BLAST on NCBI

transcript from alignment at scaffold_242:1216906..1231555+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054255 ID=TCONS_00054255|Name=TCONS_00054255|organism=Clytia hemisphaerica|type=transcript|length=14650bp|location=Sequence derived from alignment at scaffold_242:1216906..1231555+ (Clytia hemisphaerica)
CTCGTCCCACTGGTAGTTACATATTTTGTAATAAGTTCAAATAACCTTTG AGACTCAAACTATCCCTGAACGTCACAATGTACCAGTATAACTAGCACGC ACCATCACGATTTCTGCAGAACAAATGTCATTCTGAACTCGTCGACTCTA CACACAGAGAGAAAGATTTTTACCATAACCACCCAAAGATAATGTCCTAG GTTTGCTTCGGATAGAACAACACCAGTAGAAGCAAACATGCAGATTATCA AACAACATAAACAGGTATGATCTTTATCTGAATGATCCGGGGGGGGTGGG CATTCGGttcaaaaacgaccatacgtgcggcccaaaaGTAGACCTTTGAA ATCGGATCCTTACAGTGAACAGGCAAAATATAATGTGGTCAGATTTTCGA AGTTTACACCCCTTgggtgcaatttttctcatctttgctgatttcgaccc ttacagtacacTTTGGGAACTTTGGAAAATATACCCctaagggccgcacg tatggtaggtcatttatcttgagtgcccccccccacGGGAATGATCACAG GGCTCCCAGCCAACATTTTCACAAGTTAGTTttagtaaaaattgaaaaat cagtAAAACTAGTAAGATTAGGACGTCTGTGATCATTTTCTCAGATGTCT GTATGCCCTTTCTAAAATGAATATTTCTGTTCTGGGGGTATCTGAATACC GATGCAAGAAAAAGGTTTGATAAATTATGTTAGTAAAGTGATTTAAAAAT CAAGGATATCTAGAAAGGCATAGTTCCAAGTGAGGGTATCATAGAAAGGT GTCGCAGAAAAAATTCTCCTAAACAGAATATACTTTTTATAGATACAATG TGTAAATACAGTTTACTACTTTAAGAGCAAGTGCTACAGCAGGATAGGAG ATTACTTTATTACACGAATATATAACACGAATtttttcgtgttaataaaa tgactagtaatattcgtgtaataaggtaattaCGTTCACAATGGATATAG AAATGGAATTACCAGATAGTGAAGTGGTTGTTAGCCAGTTTACATGTTTC AAACTGTGGTCCATCGAATTTACCAATTTTGTATTAGCTAACGTTTTGGT TCACCTGTGTTCTCTTGGACCAAAATTTTAATATCCGGAATTTTAATCGG GCAGGAAAGgcttattttattattattataaagaaTACGGTTTCAGGCCC ATCACGCACATgatatcaaaatatgaaaaagatcaaatccATTACATTTC ATGTACTAAGGGAGCTTAAAAGTGCCTCAGGGAGTTAGGAGGATGCTGCC TCCAACAATATCCGATCTAATTGGCTCAATACACTATTACACTGAGAATA GATTTAAACACAGCATGTTTCCATCCGTCCGAATGACATTGGAGTGTATT AAATTGAATGCTTTAATGAGGTTAAGAGTTTGCTAAGCTTCATTTAATAG CTTCTTTAATTTGCAAAATACCTACACTAAAGGTTAGGCTTGTCATGGGa gtatttgatttgaaatgtgTGTAAAACCACACGAGGTAAAAGAAAATCtc tcaaaaaaaacaattaataaaTTAAGACTATCCCGTTCGTCTGACTACAA AATTTTGAATCATCAGAAAATGTCTATGCTaaataaacaagacgacttta agttgaaaatttcgccttatatttaaactgcatgggaaaaacaagTAGTT AGAGATGGCAGCTACTGCTACAAAGAAAAGATTGAGAGTTTTTGGTCTTA AATTAAGTACGGGATATATTGCTTAACACAGCCTAGATATTTACTTTATC TCACTTTCAAGAAATGCAATCCATATACAAATTCAATAAGATTTTCATAG ATGCGACTCGAGTCAGGGACTCATTTACCAAATCTTTTTTCTCGTAAGGT TGCatcaataagaaaaaaatacatcCAACACTCGTGTTTACTTTGCACGA TGGTATGTAACTATCTGTTAAGAGTAATTTATTCAGGATAGTTAACTTGA ATCCAAACGGGACGATCTTCCCGACTCGACACCCAAACGGGAAGATAGAG AATTCTTCCTAATTCGGAAGATTTGCCGGTTTAGGAAGGTTCGATTTCTT CAAAACAGAAACGGGAAGCAAGATAGAAAAATGTATGCAAAGAAACAAAC TTCCCGattcagaaaaaaatccttttaaaattcagaaaatcgtCGCCTCA ACATGAAACACTTCATTTGCCGTTTTCCGATGAAAATATGTTTTGGGTAT TTGTTAACAAGTCTTTCGTTATCTTTCGTCAAATTTTATCCtctgatttt tgcttttttccacTTACTACCAACTAGAAGAACAATCATTTTTCAACAGA AACAGGTAATGTTTTATGAATGTTCTGCAACTCTTTCGAAGGCAGGTCCC TCTCTAAAATACATTATCAATTTTAGAAGTGTAAATTATGACTAATTAAA CTtgcttttttttggaaaggaaGAGAATAATATGcgaaaatatgcgaaaa ttaGATGACAAAAAAGTTGTTTAAAGGTTTGAGAAAGATAATTGAGTGTA AATATAGCTTTATTGGTCGAACTTCTCAACTCAAAAATATCACAACACCT TAATTTATCTCCGTGTTATTACACTCGCGGCATGGGTTGTAGCATgggat tcttataaagtagattcttataagaacaagtgatacttttatggacctac ctggttatgcatttaacacatatataattgatatctacgtgagcgtaacc attaaacaatcattcagaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgag caaaaaaaacatctatctcatcaaaaaattgagtaatttggctaagaaca ttgatgtatgcttattaatagtgattcttaaagataaagatgcgtttttg agctgaaaaattcgttttttacaaaaatctgcttgagccatcttttacct tctttcatgcaaaaaatcagaaaaaatcaatgatccaatatttcacaaag tccaaaacccgttttttagccgttttttggcccaaatttgcccaaaaaca ttttttttcgaaaatcgggctccgtcacacaCTTTGGCcgccaccatttt gcacctttgtaccaaaaatcaaaagattcctattactcaatcccgagaaa agttggtaacgaacggacggacggacataggttaatttatagCCCACCGG CGGGGTAGGTACAAAAATTaatatgctcatattatgcgccagaccttgtt tactttgtaagaactaatgaCCGAAGGGTATATTAAcctctatcaagagt tattgattttattctCATAAAACacataaagtatatgcttaaaagaaaat aagaaaataataagTGTGAAGCTCatgacacaaagatatatgacgtgatc caaagaaaacctgcgAAAATCTTCCGTTTGTTTTACGAACTtgtaaataa tttaaaatcaGTGAGTTTAGTGATTTTCCACCATATCAAACACTTTCCTT TTCTAAATCTAAATTTTATTCCACACCGCCGTGAAAGGCTATcttaatac tttcgctatgcaaaatttaataaattaaTAAACCAAAACGTATTATGTAA CAGTgtgcttttgttttgttttcgtaGATAAACAACACTTTCTTGTATAA GATTGCTAACTCGAATATcttaattaaaagaaaaaatcgagttagctaac tcgaaaattttaaaatgagaaaaaaaatcaagttagctaaaactcgaaaa tttcgaaagattttaatttgacaaaaaaaatcgagttagctgactcgaaa attttaatttgacaaaagaAGTTATAGGATTTTTGCTAACTCGGTTTTCT ATTTCGGTTTTactaactcgggaattccgagCGTCCATCTGTCATGTATA TAATCAGGTGTTACTGTTGAAATCTTATTTTAACGCAAAGAATCACCTGT GCCAAATTTTGGCCATTTATTACCATACAAAGTCTTGTTGCATGATTGAC TTAACTAAAATGAGAACAAACAATCGACACATACCTCTTTTATTCTTGGT AAAAAAGCTCGATCCACAAAATAAGAGCCACCGCCACTATTTTTCCTCTT GTTTCCACCAAATGAAGCAGCCTGGGTTTTTTGAGACATTATTCAACATC AAGCCCTAATAATAAGTAATGAGAACAATTCATTCAGATTCATTTTAAGA TACAATGAAACGTCTACAAGTGTCCATTAAACCTTCCTTTTTGTGATTAT TAGGAATGTGTGGCAGAGCAAGACCCCTTTAACACCTACCTGACAATGTT ACCCTCTTGTAAATATCGCTGCCGTCAAGGCAAAAGGTCCAATATCAAAA TAAGTGTccgagaaaacttttttttttgctttgataACATAAAATTTAGA GATGTGTTCTTTTCTCTTGTAGATAGAACCATTCTCTACTACAAGAAAAG GCCCAATGTTACAATCTTAAGTTAGAAAAGCCTCAATTTTCTCAGACACT AATTGGACCTTTTGCCTCGATGCCAGCGAATATAGTATATACATATCCCC TTTCAGAACTGGTAAATACCCACCCTTATCTTTTAAGGACATTATTTACC attattttaggaatttttgaGCCTTTTGCTTTTTTCAAAGGTAAACATGG TTCCAAATGTAAATCATGCTAGCACATTTAATTATTAGCTTGAATATCTG GGAATACATGACACGTTTTGAAAGAAAGACAGGACAGTATCCATAGAATT AGTTCCAGCTTTTGAAATTGTTTAATTGGAATTAGCTACTGAAAATGGAT CATTTCTGtcaaaatttcggtaaaaatgGAACAACAGGCCTGAGATTACA ATaaaagaaatcagcaaaaactttCGGAGCTTTCTGCAAATTTAACCATT tttcgcaaaagtaaatgtctttgaataTTCTTGGAAgttcttgacaaaat aaaaaatctgtaaaacttataaaaaaatgaaagattttttcttgtcaaat ttgcgaaaagtaaattaaattagCAAAAGTTTGTATGCTTGAAGTATTTG GAATAATTAGTTGAGAGAACATGAGGGtgttttgaataactaattactac aGCCTGCTACAGCATAAAATTTGTTGAGGATAATGCTatataattgattt gtcttttacaacatAGCTATTACCTAGGGGCAAGATCATGTTCCTatttt ttgagatgggggtgcCCACTATACTATCCAAAACCTCtacatatttttta aaacaagGAGTAAGGTACTTGAGACAACCCATCATAAAAGCTTCCATTTT GACCAATTGAATTGGATTGGTATACATGTATTGGATACTTATGGCTTCAG ATTGATTATTATAACCAATCCTTGGTCATAGATTCAAAAAAGCGCTTGCT TTGAGATGAAGGTCTTGTAGAAACTTACTTTCAACATGCTAAAGCTTTTG AGATTAAGTAGTTGTAAAATATGGAGTCCACCCATGGAGTACTCCAGTAG AGTACCTGATGGAGTACCCAAAAAATAATATCACAAATGTGATAATCAAC CTGTTGCTCCAGCTTTAAAAGCCAAAACTCATTTAGTTCATATAAGATTT TTATGCTCAATGGGATGCACAGATGGCATGTTAGGCTATAAAAAGAGACC ATTCAGAAAGCAAGATTCCTGCAACCATGGTTTTACAGCAAATACAAAAT TTGAGGTACATTCTGTTGTTATGTTTATTTCCCCTCAAATCTAATCTGCT ATATTTTCttagtacacgcttttttataaggaatcaTAACTTAGctccga gcctggagttccttatttttctagAGAGTTTCATCCTAAAAGTTCCtaat cgagttccttatttacttgGCTGCTAATATTGGATTTGCTAAGTATGTAA CTACAGTTTATGCGTTCCTTTTGTACTGTATAAATTGACATTTATTGTAA AGTGTAGCGagagtgaagaaaaaaatttgtgtgtgttttttataagaagt caacaagagaaaaaaatgaaaaacgctAAAAACGCATATTGCCAAAAGCC TTGTAAATatgggcttagttaactaggttAACAGAACCACTATAAGACTT AATGGATCTGGGACGTTATTTTCAAAGAAGTGTTTTAGAAACAACTCGAG ATACCTAATGCACACCCTAGTGGCCGCATATCATAGAATGTAAATGTTTT ATAggttttttcaaagcattttgaTACAGAAAAGGAGATAGGGTATGGTC AGATGGTCCTATTTGCTCCATAATAGACGATATAGGcttcacatgaaaac tcagatttgaccccgagaattccccacaatgctttgtgcggaaaaaattt caccatgaacttttttccgcgcaaagcattgtgagCAATATttggggtca aatctgagttttcacgttaagccgatattgTCTATTGAAAAACTTCGAAA AGACTTAATTTTTGCCccattttgatgacatcataaaaaagaaaattttg aatagcTTCAAGTGGAGGAAagcttttgatttcaaattttcacaaaagGT ATAAATGGATGAAGGGAAGTGATTCACaaaaagttttgctgacgtcagca aatttgcaaaaatctgttttGGCTGAAATATGCTGGACCCAGGccaaaaa ctttgaatttttttggtgGATCACTTTCCTTTATTTATTGATTTAGGCCA CAATCACAAATTACTTGTGTTCACGTAGTTTGACTGACTGATCATTTGTG TCCCTGCAAGCGATTTGGAGCACATTGAAAATGGGCCGATCCTTAAAAAG CCGAACTTTTGGCCGGCTTGGACCGTTCCTGGCCGAATTCGGCCGATGTT GACCGATCTTGGCCAATCTAGGCCGATCTTAGCTGAGccatgtttctaaa tcttttctctaAACAAAGGCCGATCTAGACCGGTCCAATTCGGCCAAGTC CGGTCTGAAAACAAACAAGTAACTCTTTTTCGTATGAcggttttttgttt acaatctcGAGTGCCTAAAAACTTTCGAATCATTTTGTAAAGTGTTCGAA TGAACTCCAGAGAacgttcaaatgttttgaaaattgttcgatcaaattat taaaaaagttttccggatgtttttaaaagtctctaactctaaaatcaaaa caaaagcaaaaggaaAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTTTAACAGGGGAGATATGTAAATGATACAGGGATCGATGTCTAAATA AACTAACGAAGGGACACAGTGCAATTCTATTCTAAGGAGGATTTCTAACA ATCTTTTCTTAATGGATTAATAAGAGcgagtgagtcaatgttatgaTATA CAAGGGAGTATATGATTTACGACAAAAACGACGactgtttgaaaacaatt ttgcttCTAATAAGTATTTCGGCTTCCGTAAAACATTCTGGACCGGTTCG TATCGGCCTGGACAGGTCCATATCGGCCTAGACCGGTCTTACATTGGCCG AAcatcattatttttgttttatcaggTTTGTAATTTGACAAAACCGGACC TGGCCGTTATAGGCCGATCCAGACCGGACCTAGCCGATCCGAACCGGACC TGGCCGATTTGGGCCGTAGAATTACTTGGCCGATCCTGGCCGATCTTGAA tgtgctctaaatcgcttgcagggacacatttttcttaattattttctgat tattttgagTCTGGCTCAGGAGGTAGCAAGATTGATGGGAATTTTATCCA ATTCCATCCTTCACCCACCATCCTTACTTCGATCAGACGTTTCATTGTTT TACacagaaaaattcaatttcaaaatataacgGAGGTAATATCTTGGGTG CGCAGTTGTCAAGATTTTTGGCGCGTCACAAGGAAGACTTCACCAAAATT AAGTTCAATGCATTAGTATTTACTTTTAAATCATTCAaatcttttcattc tttttttaaatcaatcagaaattatcagggaaacaaattaaaaagaCTTC ATCTGAATATctcttttctttccaaagatattgatatttttcaacgtcaa ggtgaaaacacgACTTAGCGCTGACTTaccatagtgcggaaaggggtctg acccccccttcttaaatgatcccctaacctttaaaaatgcctatccccta aggattttggacaaaaatagctaacaaatatatggTGAAATATCTTAGAG AGAAAGcaaaataataaacttctttcttcttttcgactcagactactcta acagaaaacttcctttaatgaagaccaaatttcataacctgtgcttgaaa ataatctacaatatatatgtaaAGTAAGCCCCCTTCCTTGCTAACCCcct ctttttcatgaaaattccTGTCCCCCCCTTCTTCAACTTTTCAGAAGGTG TCAttcccccttaagaaagggggggggcAAACTATGCTTACTGCACTGGA AAATTCTTAACCCACATGGAAACAAATGTGGCTGTGCTaatgagctggtt catcttttcaatcgcagTTTTTTCAGTAAatccagggtaagattaggcta caatccaTCATTAtgctgctttatttgaaaatctacaggccgtctgaaat tttgaaaaataataagaaattgcaattttttcatGTATATAAGcagcata caccatctgaaagctgaggttttcagctttctagtgctaaaattttttta gctatcatttccagctcattagcaaTAATACAAAGTTTAatagtcatcgg gccgattttcagactgCACCAGCAAAACTCTGCACTCCCTGCCATGCATG GAAGGCTAGATTTCatgcttttgaaaaattatttcttactAAAGCCGTGC AAGCAGACATTTCTTTGGAAAGGAGATTTTGTGTGTTTTTAATATGAAAT AACTTTGgaaatacttaaccaattttgataaatgacccctcatttttctc ccTAAGGTAAgggctttcaaataaaattagtttggtttttaaaaattgag gGGGAAATTTTGCCCTGTCCATCCAACCCTTTCCTATAGGTTTGTGGGGA TGTGTTATCATCTCCCTAGTCATAAAAACAGAGATATCACATTTCAAGAA AAGAGGGGAAAATCTATAAGAACCACATTGACAAATGTCTACATAAACAT GGCAAAATAGCGGGCAATCTATTTCAATTTATAAGctttgatttttgcct gaaactCGTAGTTTAAAAATCctctttttttacattttttttgccaGCCT GACAGACTcatttttttacctaaaaacGACGCAAACAaagttatttgtga ttgtgGCCTTACCTTACAcctttgatgaaaattttgaagtcaaCCAGGGT TTGAATTATAGCTTCGCACTTCGCAAAATGCgaagtgaattttagattta gaagtaaaaaaatcataagaCAACGCCTACTTGTCTATCCACACTtctgt ttatctattgctttatctgcTCGCTACTTTgcaactttattcactcgttt atatcttgctttatcaactcgctacttcgcAACTTTATTCAATAGTTTAT CTATTGCcttatcaactcgctacttcgcaactttattcacttgtttatct attgctttttaTCTACTTACTACTTCGTAAATTTCTTCAATAGTTTATCT cttgctttatctacttgctACTTCGCCACTTTCTTCacttgtttatctat tgctttatcaactcgctacttcgcaattttattcactcgtttatatcttg ctttatctactcgctacTTCGCAACTTTCTTCAATAGTTTATCTATTGCT TCATCTACCTACTACTTCacaactttcttcattcgtttatctattgattt atcaactcgctactactttgttactttctttactcgtttatctattgctg tATTTACTCGCTACTTCACTATACTTTGCTTCGTCTACAATCACTTATTT CAAGTCTTACTTTGCTTTTCTCGAGAAATACATTGAAGAtacttttgcat ttttttccaaacaacaTTGCAAAATGCcgccaactgctctaacttgggac gattggtctggctagttcgaaacacgggtcacgggcacggggcatacaaa ttacagaccggaaaaaatataacaatatcATGACGTAAAATTCATAACAC GTACTACATAACACATAAAATAGTACTAGTACtactagtatagtatgtct aaaacaattatatacgaatcaggggggggggcacgcagttactacaagac atgatgtgtagtaagtactttttcaacacttttttcaggaccaccaccct ttgcagttactacaccttggtagtaactgttttcagaaaagatttccagg taccacccctttTTTTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNattgcgattatttttcaacctaaagccatttttgtgctagatttt cttttaatttacttggttaacagctgttgagaacattttaatgataatta gggaaggcataatttcaaagttgggtctgagaaaaatttcaaattttttg tccatttataacaaaaatattttttttaacaaagaattttttcacaaaaa aattcatttttggcgaaaaattttgaaagttcttgaaaaagaattaaaat ataagcacttactacaccaaaagtgctagtgttagtgtttggcaccaccc ccaaacagcagttactacactgtgtagtaactgttttcataacttctgaa tacagtaccaccacggtagtaagtgtcatactgtcttgtagtagcTGCGT GCCTCCCCCCCTGTACAAATAagtattatcatgaaaatttttaaataaca tgtcacccacaaattttgacaaaatgatattgaatggcaaaaatattgtc aaaatcatgaaatataagcctctgaaccaatttacagcaaaatatttttt catactcagtatgctaatcatgtgactggatatagattgacatgttttTA AAAACGATTAAATGCTGCAAGCTTGTTGTTTTAGAGTATGAGTATaatta tgtcatttttattaaaaattcataatggtaggtggaaaatattgacacat ttataaaataccaCCATTTCTAcgctaccgtaagttggtctaatgtcgac atccgtcttctaatttcgacatccttctttaaagataggaataataagaa ggtcgaaattactgatagactaaagatttttcctctcgccgcgctaatca aagtcaatcagcgattccgaccttcctcagtttctattgttcctatctct aaagaagggtgtcgaaattagaagacggatgtcgacattagaccaactta cagtattatccattaaaatcatattcataCTCAACCATCAAGgtgatgga ggggatataatgagatatgatttaacaatagccttactatcattttcttg agaaagctCGGTTTTCAGGTGAtgggaattgtaatatgtatattacttGC ATATAACATATAACAAACATGCATATAGCATTAAAAGTGTATTATTGATT AATATAACCTTATTATATGTAtatatgtatgtaatatgttgcggtgtttt ctggtctgcgttgtacacgacgcaaacttcgaaagaacattttctgtttg aattactttgattAGAGCTGCCCCGTCACCCCGTGCCCCGTCACCTTTGT TTCAAACTAACcgcgattggtcgaaacatgggactggttaaTATCTAGTC TGTATTTTCACTGGCTGTTAAATCTCTTTAAGACAACAAATTTGgtttcg tgtattttttaatacgccgttcattaagtcATCAAATCAAATGGTGGCCg atttgtcagatagtcccaagttagagcagttgacggtactaaaAATGCTT TGCAAACGGCACTCCTTTTTTTACCTGACATCGCTCGAAAAATAGTGAAG CTccttaaatttataattttaacCCTGTCAACAGATTTCCGTAAGTTAGG TCTAATGTGGACATCCACTCTTCTGATtttgacatccttctttagagata gaaaTAATAGGAAGCCACCACCAAGCTTATTTTTTACGAACATGGCCATA TTCATCAAGAGCAGCCGccgccggcagattttttttaaatatctgttctt tttttccaggagagtaaattttatagataaatctaggagagactttcctc cAAAACACCCAagtaaaatccaggggtcacCTTAAaagacatctgttctt aaaatccaggagcacattttaaggaaaagcACATACATaattttccagcg gacaatctgttcgtaaaatccaggagctaaattgtgaaaaacacaaccag atgccagattACAAACCTATGTTTTAGGAGGCCATATACTGAAATACATC TAATGATTTCGAGCCTaacattgaaatttcaatacCTTATTCTATTATTT GTGATGCTTTGTGACTTCAAGTGCTCAATTtctgtaaataaaaattttgt acCATGTGTTTTGAAGTGTGGTTTCGAGCTATGGACATAATAATCGGTCG TTCAAAGTATActttttttgtcaactttttccGAAAAACTGATATAGTTT TATCAGGGGGTCTAAACGTTTAAATAGGTATACCtactttttatttactt tgacattttttaaatcaaatcagCCATTTACATATTTAAAACATTATTTC GATtcagattttttgaatttttatcctCAAAACTGATCTCATCTACAAAT TTGAGCTATACCAGGTTACAACTCTACCCCCTGAATGTACTTTCTTATGA AAAAGGGGATGTATTCTCTAGATTGTTTCGACAAGGGTCCTGACCAATCA GAACGCTCATTTAAACAATCGTCGATTCTGCGTTATGCTTCGCTAATTAT TTTTCTACCTAGAGTCGAACTTTGCgatgaaaatttagcaaaagaaACAA ACCTTGATTTGTGTCGTAAGCCTCAAGACTTTACACTCAGTTTACCCTAT CCTAACGGCTTTATTGCTGGAAAAGGAACCATACAATCCTGGCAAATACT TCGGAAAGTCAGGTAAACATATATCCTTCTGAATATCTGGATTTTGAAAG GATTCTCagctttttgtcatttttgtttacctttttgtTTATGTCAATTT TTTCTTGTATCTTTTTGAAACATGTAAACAAGTTTTTAGAATTATCACTT AATTCCTAGTTTTTGTAGCTGTAATTAGTGCTTTAGATAATCTTGAGAAA TTACTAGTCGATCAGCTCATAACTTAGATAAATTTTTCTTGGAAGATAAA AATATTGTGGCTGGCTGGAGTTCACTACTCAAAGAAAGGAAAATCCTCTT TTGAGAATGTTCATTCAGAGCCATCGAATCCTCTTAACAGATCATAACTT TCATCTATGTCCTGTACTCTGCAATAAAGTCTTATGATGTCCAAAACTTT CTCATGCAGCCACACagacttaaaaacaattttccaatttacTTTTCAAG GAATGTTTTGGAAGTGGTACTGACCATCTTGATAAAAATTTGAGTGCAAA CAATCTCCGCTCATCACAACCGGTCGTGTCGAAAACAAATATAATGCCAA TGATTCCTCCAACTTACTTTGCAGCTCAACTTCAAGCAGCTCAACGCCGA GCTCAAGAAGGCATCCAAGCTGTCCCAAGTTTAGAATCAGATGGAACTGT CTCCCAACAACACCAAGACAGCCTTTTCTCCGAATGTGTCCTTGATTTgt ctaaatctttaattttgatcaCACCAGGCAGAGGTTTGTGCAACATTTCT GCGTCTCTGGCAATTTTTTCGTGAAagatatcatcaaaaaattcccGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034224XLOC_034224Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054255-exon-scaffold_242-1491911889:1216906..1217169TCONS_00054255-exon-scaffold_242-1491911889:1216906..1217169Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1510915933:1216906..1217169TCONS_00054255-exon-scaffold_242-1510915933:1216906..1217169Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1575043694:1216906..1217169TCONS_00054255-exon-scaffold_242-1575043694:1216906..1217169Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1491911889:1230618..1230767TCONS_00054255-exon-scaffold_242-1491911889:1230618..1230767Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1510915933:1230618..1230767TCONS_00054255-exon-scaffold_242-1510915933:1230618..1230767Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1575043694:1230618..1230767TCONS_00054255-exon-scaffold_242-1575043694:1230618..1230767Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1491911889:1231206..1231555TCONS_00054255-exon-scaffold_242-1491911889:1231206..1231555Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1510915933:1231206..1231555TCONS_00054255-exon-scaffold_242-1510915933:1231206..1231555Clytia hemisphaericaexon
TCONS_00054255-exon-scaffold_242-1575043694:1231206..1231555TCONS_00054255-exon-scaffold_242-1575043694:1231206..1231555Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1216906..1231555 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
370.429 391.667 367.719 358.369 674.258 527.492 672.778 771.563 2796.7 2136.24 3086.34 4533.98 2462.71 2636.82 1471.03 1327.58 1318.56 1527.73 2649.6 2543.23 2299.76 2254.09 912.125 1185.52 1119.79 934.164 1318.76 1380.74 928.435 996.909
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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