TCONS_00054283 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054283
Unique NameTCONS_00054283
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length732

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054283 ID=TCONS_00054283|Name=TCONS_00054283|organism=Clytia hemisphaerica|type=transcript|length=732bp
TGCAACACTCTAAAACACTTAATATTATTGCTGGTTTGGGAAATCATTTT
GCAAAGCACAGTCGTCACAGTGTTGGCATGCGAATATGCGATTCGTTAGC
CAAGAAACATAACTTATCATGGTCTtatgaaagaaaatataaagccTTCA
CAACAGCTTTGTCTGTGCAAGATCACCAATTTATCTTGTTCAAATCAAAA
TGGCCAATGAATTTGAATGGAAGAAGTCTTGAAAAAATAGTTTCAGACTT
GTCTGTAGACATCAACAAGGTCACAGTGTTACATGATGAACTTGATCGAA
ACCTTGGAAAATGTCGCTGGAAACTTGAAGGGAGTGCCAATGGACACAAT
GGTGTGAAATCAGTCATACAATCCCTCAAAACTGATAAATTTCGTCGTTT
ACGCATCGGTATCGGTCGACCGATCAACAAATCGGACGTGGTGGATTACG
TTTTGTCTGATTTTACGGCAGCCGAAGAACAAGAGTTTTTTGAGGTGGCA
ACCAGGTGTATAGAGATGTTACGGATGGATGTTTTCCCTGATGAAGTTGT
AGAGGTTGGTCAAAAGGAGGCGAGAATAGTTGTCGAGGGAGATGGGGATA
AAGACGATACGATCAAAGATTCCTGATAAGAAGTCGAAAACCGTCCAAAG
TTTTCTCCTGGGTCAACCGGTATGTTTATTACGTGTGTTATTAATAATAA
ACATTATaaaccttatcggggaaaattttcgt
Run BLAST on NCBI

transcript from alignment at scaffold_242:1581341..1597733+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054283 ID=TCONS_00054283|Name=TCONS_00054283|organism=Clytia hemisphaerica|type=transcript|length=16393bp|location=Sequence derived from alignment at scaffold_242:1581341..1597733+ (Clytia hemisphaerica)
TGCAACACTCTAAAACACTTAATATTGTaagtatttcctttttttttgct
tttgttttttttcatgtaTACAAATCCAGGATATGTTTATCAAACCTTGC
TTGCATTTGGCAACAAAGCaatctttattatttttgtcattcaTTTTTAC
AATTGAAACTTTTGCTATGGTTAAGGGTTTTAAATTTACTGTATTCAAAA
CGCGTTTATACACACACAGAATTCTTAGGTTCATCAGGTGTCGTATGGTT
GGTTAGGCTaagtcatatcttccttcgttttcagcgtaaaactcctactc
ttcgggatatgcgcACTGTTCTTGTTTTTAATTGAATTTCTCCGTATaga
tcgcatgcgcactgaggttttgatgaaacaatagagagtttggAAACCCA
ATTCCAATTAGCTGTGTTTtgaacattcttttattttaaatctctatgat
aaacatcttttgtttaTGTATAATTTCTATAATGTTTGAATCCTATTAAA
AAGCGAATTCTTGGCACCATAGCAGTGCCTATATACCAaaagtaaggcct
aaaagcctggagcgtTAATTTGTGTAGACTAATGCTTGGTTAACAGGAAC
CAATAAACTTTGGAATTTCTTTTACCTTTATTTAGATTGCTGGTTTGGGA
AATCATTTTGCAAAGCACAGTCGTCACAGTGTTGGCATGCGAATATGCGA
TTCGTTAGCCAAGAAACATAACTTATCATGGTCTtatgaaagaaaatata
aagccTTCACAACAGCTTTGTCTGTGCAAGATCACCAATTTATCTTGTTC
AAATCAAAATGGCCAATGAATTTGAATGGAAGAAGTCTTGAAAAAATAGG
TATAAGCTAGCCCATGAAATTGACAAAACTATTTAGTTGATATACAGAAA
TAATTTAGAATGTTGGAAGGCTCGATGAGAGTAGTAGTCAAGCTAACAAA
ATTACACGAATCTGAATCTGTCAAGAAGGATAGTAACATCGATACAAATA
Ctaaattaaagtctatttcaaattagctggcagtcttttttcaaacctca
ataactcttgatagaattttaattaattagcgattttgtgctcgttggaA
AGATTATCAGGAGTGGAATatgattataataaaaaaatcgatgaaatatc
taaaatgaagaagaaaaacgaaaaagaaactttttgtctATTTATGCTAT
GGACATGGCTATggctaaaaaaattgaaaaatattcttgtaATCGGAAGA
TTTAAATGAGTTAGAATTAAATGGGTAAACAATAAGTACAATTATGACCA
CAAGTAATTTTATGTTCAACTTTTGTTTGCAGTTTCAGACTTGTCTGTAG
ACATCAACAAGGTCACAGTGTTACATGATGAACTTGATCGAAACCTTGGA
AAATGTCGCTGGAAACTTGAAGGGAGTGCCAAGTAAGTTTTTTTCTTACT
GCTAGAATATTGAAACGacatgaaaaagtcaaaaatgcgTTCTAGGGTAC
TCGGACCATACTAAAGACGTTTaagttgttttcttttttattttggtatC
AAATTCAAGATATAAATGCCTGGTACACACCAAATATTCACACCAAATTC
CTAGAAGAGCCATTATCATATTTTCTTTCAGTGGACACAATGGTGTGAAA
TCAGTCATACAATCCCTCAAAACTGATGtgagttttcaattttttttttc
ttcaattttacgAATATTGGTATAATGGACACCAGATTCGTTCTGGACTA
TAGTAAAACCTATCATATAATGTTAAAATTGTATTCTCGGTCTTCAGTTA
GGAACGTTTATGAAATCTTTGCCAATAAATATACAAACAATGATAACTAC
AAAAGTCTCTTCTATTGAATTTAAACAGTTTTAGATTTCTACTTTGTTAT
TAGAAATTTCGTCGTTTACGCATCGGTATCGGTCGACCGATCAACAAATC
GGACGTGGTGGATTACGTTTTGTCTGATTTTACGGCAGCCGAAGAACAAG
AGTTTTTTGAGGTGGCAACCAGGTGTATAGAGATGTTACGGATGGATGTT
TTCCCTGATGAAGTTGTAGAGGTTGGTCAAAAGGAGGCGAGAATAGTTGT
CGAGGGAGATGGGGATAAAGACGATACGATCAAAGATTCCTGATAAGGTT
AGctcttttttttcatgtttagtCTCACTGGTAGAAttaacttgaaattt
cattgaaacttggacaaaatttcaatgagCTGTAATTTGTCTTTAGCTGT
CGCTAATAAGATGACAACAATAAAGGTGATGTAGTTAAATGTGTTACCCA
CCTTGGGAAACTCTAGCTGTCTCTAATAGAATCACTGACTACCAAAAAAG
AGCCCCGTCGATAGATTTTCtgatcgaaaattgaaaaagagtcgaaaagt
cttttttataccACCACCAGGACTAGATGAGCGTTTTGATATTAATGCAG
TTATCTAGTTTTAACTCCTTGAAAGATGTCAGAACTACCAAATTAGATTC
TTAAGCTTTTTTCCCATTGGTGCATCGAGGGTGGGCTTTTTTTCGGAGGT
TCTCTAAGGCGCTAATAAATTCTACTGGACTATTTATGTTATGATTGGAA
TAGTCAATTGAGATGCTTGCTGTAAACAATTATACCATGATNAAATATGT
TATGATATGCATAGTCAATTGAGATGCTTACTGTAAACAATTATACCATG
ATTCAATCAGGAAGTGAGAAGTGTTGTCTATCTCGAACTCTGGACTGAAG
TTTCTGTCTAAGATTTAATGTTTTACGTTTTATACGGGATGGTTCAGGCA
AGAACTCTGTATGAGACCTGCAACGAATAAATTATTGTGGGCAATGATGT
GGCCGACCACACTTGCAGTAAATCTTTTTTACTCAAACCTAAAATTGGAA
TGAATGATGAATGTGTGAAAATGTATTCATGGCTTACACAAGAAATATAG
GACCAGAGTATCTTTCCCTTAAGCCTTCGATATGATTTGCTTGAATATGA
TGGAAAAACATCTTAAATATTTCATGTGAGAATATTCGAAGTAATGAATA
TTTTACATAACCTAAGCATCAAGCATTATACTGGCTAAtgaatatttcat
ttttcttctttcaaaaagTCTGCACTTTTCAATCAAAGGTATGAGATACG
ATTGTTTGATTTTGCATTGATTAAAACATTCCTCGATGTTCTGTTTCGCA
TGTTTTGCAATAACAATCATAACGATCTGCCAAGTTTAGACTGGAccttt
attttgattatttttgtggTGATCGTTTTCCAGTATTGAGATGAGTCGCA
CTTGATCGCATTTGATACTTTCTATCCTGTTATCTTGGACGTGTGGTAGT
ATATGCTTTGTTGATTGAGCTACTTTTAAAACTCTATGTTCGGTTTTCAT
GAAAGGAAAAgctgtttttattcaaagacTTTACCCTAAAATTAAAATCG
TTTCGCCATCAAGCTGTTAGCAAGGAAGATTTTGTCGAGAAGACTTTTAT
TTTTGGATGAGAAACCCATCTTGTCAACGTGGAAAATTTTTCAAGGACTT
catatttcataattttggaATCCATCTGTCTGACAGCAGTAGTATTGCAg
tattataaaaacaatttcatttccaCGTGAACCAAAAGCATGGTTTTTGT
GACATTTACAGTAGCAGCTTTCGTTCTAACAGGCGTAGGTACCGGCATTT
TATCATGTGCTTTATACGGGCTCTTAAAACAATTCAATGATTTGGAGTGC
GAAATGGAGAGACGTTCGACTTCTTGGAAAATCTCTCAAGGTGCTTAGAA
CAATGCCTAATGAATTGGGAATTATTTGAGACATTTTGCAATATACCCTA
AGTTTGATTATATCTCATAATGCAAATTTCTACTATATTTGCAACCTAAT
CCATGAATGGTTGTTGATTTACGATACCATTGATTTTGTATATATTTGAA
AGAGAATTGCTaagtttttcatcattttgttaaATGAAAGTTTAATCACA
GTTGGGTCAAGATAAAAGAGAATTGtattttaatcaaaccccttttTAGC
AATTTCTACAGATGAGAGGTTCTGATTGATTTTTGCCGTTTTCTCAGGAA
CCGTGGTGCAAAGATAGATCATTCGGCGACGGTGAATGCGGGTTTTAAAC
CTCTGCTGGGCCATACCAATGACTCCCCAAACGGTACTTCATGCCTGTCT
GCTTGATGTTCAGCATTTAAGAGATCAAGGATACGattcagggagaaaga
gtggcaccctcccccCTACCATCGGGTAGATAGCTAGCTATCCGaagagg
agcctttgggtcgcctccgactcCAATGGGAGACTTACGTACACGTTTTC
TAATCGGTCATAATCTTTTCCTAGTTGGAACgaaatttttggttttaaag
TCAACGGTGTGTTAGCCTTGCCCTTTTCCCATTATAAGTCTGGTTAGATC
AAGTTGATCTGGTCAATTTCTTTTCCAGCTCGGATTTTTTATTAGTTTGA
GATCATCCATAAACATTATGAAAGAGTATCTAGAAATGGTAATATGGTTT
GGAATAGGTTTTTACCTTGCTGGTTTTGCACGTAGGTTTGTTTggttttg
aaatcaattttctggTTAAAACTTGCGGTCAACTATTCTCTTCaggtcga
aaaaagtgaccctatTTTCTGGGGGAGGGGAATCATATCTGCTACCTTCA
AACAGCTTGCCacgttttaaattttctttcatattttgttttcaataacA
AAAGCTTTTTCTCAGTGATGTGGTTTTAAAAATCAtcttttattttctgt
ttttcacGAATTTTAAAATGCTCTTTCAGCGAAATCAGCAAGTTACCGTG
AGGTtatataacttttaaaatatagATCCGATTGAGTCGCCGTGTATCCA
AGGCtttatggacgccagagaatattatctggCGTTATTATTAACCATCG
GATAGCCGATGATACACAGGGAACTATGAACCCAGGATGGTTGACACTTT
AAGTTTAACGTCTTGACTAAGTTTAATTTTGCAAACCATAATATCcctaa
tagaccttatcggatttgttttttttctaaaaaagcgatgcattgtggga
ttgtttcgagtgtattacaatagaatccCCTGGAGGagttcctaagagat
ttctattgtaacacactcgaaacaatcccacaatgcatcgcttttttaga
aaaataaaaaactccgataaggtctaatTCTAAGAAGACGTCGAATACAG
TTAAAAACTCATCTTCCTCTTTTATATTCAGTTCATCTTCGAAATTTAAT
AAAATCATCAAGGTGAGACTAGTATCATAGTAGGACGAATCCCACAATGA
TACAAGTCATCTGGAAGATAGCCGGTCATGCACAATCAGGAGTTGTGATA
ACAAAGATTATAAGATTATTAGTAAAGTGTTAGAAGGCCGAAATTATGTC
GAAACAAACTGAATGTAATTTGTGTGAGATCTTAGCTTTGGATGTCAAAG
TTGTCGTTCTTATAATTTTGAACCTTCTTTGCTATGGAAGTGGAATATGC
AAAAATTAGCATATGTATTTGGTTGACTAGGAAGAAGAGCCCCAAGACTG
TTCAATTGAGTAATAGAGCtgcgaaagaaaaaaatctggtGGATTGTCTT
TGGGGTGAAAATTGACTAGAATTGCAGATTTTATGCAATAAAGACTATGG
CAGAAGATCCTAGTGCTaaatgtaaaattaaacaaacaaCAGATGAGATG
GAGATTATATTCAGTTCATCTTCGAAATTTAGGACTACACCTTCTCAGTC
ACAGCTTGATTGATTCATTTTAAGGATGATTTTTATGTAGGAGCTAAATA
AGTTTAAAATTGTTCACTTTGGACACGATAGATCTTCCTAAATTCCCCAC
AAAAATGCAagatattttaataaatttagtAAGAAATTAAGAACTCTTGG
GGATCgtgtcatttttttccatctAGATGGGGCGCCCGTCCATTTTTTGA
CACTTCAAATGGGATTAAAAATCCATCTGATTCCCATCAAATCGTCCATC
AAAATAGGAACACGATAAGACGGTAGCCTGATGACAAAAACCTTCACCTT
GTCTTAGACAACCGTCTGAAACCCATCTGAtgtgtttattttgaaatttc
gtcGTCAGAGATCAGCCTTAAATTCTACATCACGTCTCAATTATTTCCCA
ATAATTAAGCTGCTTTTCTTAAACTATAGAAtgttttgcatctttctcat
aACTTTAAACGTCATAACAGAATTTCATTAGCAATTAAATAGATGAGTTT
GACCCTCGTAGGAATatttaaagtctcatttgggaattagaTAAGTGcgt
tttgatgagaaatgcaattaaaattcTGCGAGAAATCATTTAATGGTTGA
AGGAGAgtgaaccaatgaagtataagcccgaagggctagaatcgaatctc
cttggtatgatttgaagccaacaaatcctaccaaagtagcgcggccttga
gcggctcgcctggtttttacacaaatgacagattgaaaccaAAGTCTGTT
AAATTGCGCGCCTGCGTACCTTTCAAAAAGTGACTCTCTTTGCGCGCCCG
AAATTTTTGGCGTGCCTTATAATTGATATGCATAAtgttatgaatagata
attactttGTTATAAAATCTGCTCCCCTACACAAATTTCCCGACACCCCT
GAGAACGCTACTGAGATCTTCCTAATTCTCCCACAAAAATGCAAGAAATA
AGGAACTCTTGAATGGCATTTGAGGCCCATGTAATAGTTGGTAGTTAGGA
ATTActaatttctgaaaaaagagaaaataccagaaaataccaaaaaaaat
ttcgtgCTCGTTTCGCTCGCGTAATTTTCACTAAGATATTTACTTTAAAC
TGGTATCTGTCAAAAGGTTTGaacttaacctttccagcgcgcaacatttt
tataTCTTCAGCCCGTCTGCGCGCaacgttttttgatgaaaatgcaattt
tcacgataaccgttataactttttgaaaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTCACCTAGACATCTCACGTTCACATCTTATCATTGCTAAGTTAAACA
GAGACCAaactctttttcattttcatttcctcTTTCTTTatattaaaaac
ataaatttagTTTCAGTAGAGATAGTGCTCTACGTTTAAAATCACGATTC
ATAAGTGTATAAATTAAAGGGTTACAAAGTGCTGTTAAATTTTTAATGGT
ATACAGTATATTGAAAACTTCATGAGTCAgttcaatttcttcttcaagCC
ATATCATTACGTCAACATACATGCGTAACGCGAAATACGGCAACGTGAAC
AATACGAACGCAACAAACATTAAAAGTAGGCATAGTGCGGCGTGTaactg
ttttttagccgtttttactTGCCCGTAAAATTTGATATCGGACTGTCCTT
TGAGTAGTCGGCGAATCTCTTGGAATATGATAACGTAGGCTGGAAACATG
AACAGGATGGGTAGTGCGGTGAACAATAACATAGAGAGGAAGGTGAGACA
CACTTCGAAGATGAGAATCCAATCTTCACCCATTTGCTCAGGTATTGAGA
ATATGTAAGGATACAAATAGATGACTTGGAGTATGGATGCAATCAACGGG
ATGAGCCAGACTGACAGTAAAATCTGTTTAAAAAGTTTGTTAGTTATAAT
GCTGTTATATTTCAAAGCTGACATGACTGATATGTAACGCTCAAATACGA
AAGCGCATAAATGTAAAGTTGCAACTTTGGTTAAACCAGAGGTGATGATG
TCTACCAGAATATTGAACACCAAACAGCTATGGCAATCAGGATCGTGCAA
CTCCTCCGATACTTCAATAATAATATGTAAGGCGACTGTAATAGATCGAA
ACCATTCACAAACGACCATGCTACACAGAATCTTGTTCGGGAAGTATAAC
AACAGAATTGGACATTTGTAGAACACAAGCATAATGAACATGGTTAGAAC
AGCAATCAGAATCGCAATTATGGAATTGGTGATGATAGATAGTTCCATGC
TGATCAGCTTCGGTGGTTGTCTTCCCAGGATATGTTTCGATTATTTGTGA
CTATTTTGTAATCAAATCCGTGGTAGTGTCTAGCAGCGACTTTGAACGTT
AATTGAAGCAGATGCTGTTATCGAAGAAGTTGTTTTATTCGTAGCTTTGC
AAGCAATGATTGGTTCTCGTTCAACCGGCCCCTTTTTTATAGTTTCCCCA
AAAGTGCTGATTGTATCATTTTCTCTCGTTTGTTTCGTTCCCTTAAggct
ctattttttttttccttttctagtTTTCTTTTGTTATGCATTGTTATGTA
TTTTGAAATAGAGAAATTAACTTAACCATCTTGACTGTTTCGTTTTGCAT
TACAGTAACGTAAGTTTActtaaaaatttcttctttttggtTTTTAGCAC
TTAGTACTTTTTTTGTTCCGTGTTGTTACCATTCTACATGATTtacattt
caaaaatcaatttattgGCTAAATTTAGCGATGATAGTTTCTTTCGTTTG
CTACTTTCTGTCTAGGAAACTTATGTTCCCTTTTGTAAGCTTTTCATTCT
TTCTATGTGAAAAATTTCACAAGAACACTTGGttaaaggaattatacggt
gttatattcacccgactcgtctgaaactgatgtcagcaaaattttaataa
aagagtcctttcaaaattgtaaataaaaggaaggaaaaaatcttgcttta
catttttctttattcattacaaaagatttatttcaatctgctgaatcaac
atacattataacttTTACATAAAGGTTTTAATATTATGTAAAAACCTAAG
AATAATTGAAGAACGATCTGAGCCTCATTGATTTCAGAAATTACCAAGAA
AACACTAATTTCAAGTCATCAACTAAGTGtattaagaacatcataagaac
atcTCATTATCTGAAGAAAGTAAGAACAGGCAAAACAGAGCCAGAGCTCT
ACTGGTTGTCCAAGAAAAAAGCTCCCCTCTTTGAagttaattttctcgag
ctttATGAAAGAATCACGTTGAATTTACACTGGAAAGTAGAAGGATagaa
ttaaattttgatttgtaaaatttggtcgactagatcaaaagttatgacct
aaatgctaaaacattatgataaaaaaagttagaaaaaggcGAAAAACGAG
GGTATCAAGCACTGCTTttatgaatttcttaacgaTCAAAGTTTTTCCAT
GTACCTTTATCGAttccttttattttctttgtcaaatttaACGAGCTCTC
GTGGCTATCATCAAGGGACATGATGCTCctacaaatttcaaaatcttacc
AATATTTGTGTCTTTGTCTTACAACAAGTTCAATACCCTCACTTTTCgcc
ttttttcgacttttttgaaaagtaatgttttagcaatttagaccatgttc
agacgttacggttccgtttcactccagtatgattttcgttacagATCGAA
AGTGTTCATTTTAGTTTcagaacgtttcggagcaaggaaacggagcagtt
ccgttccgatgaaaatagtggagcgaaaccgtttcgatctgttttgcttt
gtaacgtcttcttttttgacgtttcgaattgacgttcacacttgtttcgg
aaacGGAGCGAAACGGGAACATAAcatctgaacatggtcttaggcAATAA
CTTTTTATCTAGTCGACCAAATTTGAGAAATgaccctgcaaaatttaatt
ttatccttcctctttccaatgtaAAAGGATTGCCTCTTTAAAGgttcata
gaactcgagaaaactCACTTCATAGAGGGGGACTTTTTTCTGAGACACCC
AGTATTATTATGAGATAAATTGTTTATTTAAAGGTACTCGTACATAAGCa
tatttttacttcaaatttcacgaatttcatgtatattttctttgaaaaga
ttaATATAATACGCTACTCTTCATAATCCATACTTTTTGTTTTCtaatat
tgggctcttccagaaaaaaaaatgagtaTGGGAGGGGGTGGagtatataa
cattttttgaacattgtgatttttgaccccccggacagcaggtctaaccc
ccgaacaagcatcagttgaccccccagTTGatgtttttcaacaaaagatt
tGCATTGCATTCACTCCCTGAAATAAATATAGATATGACCTGGCTTTCTA
TACGCTTTGAGGCTAAAAGAACCTGGTTAATTAACTATTTTGTGGCGATT
CACGATTGTGAGGGAGCactcattgattttttttttgataagatGTTCAA
TGAGATTTTGTGACCTAGTACACTCAGAGAAAATTAACGAGAAGATAATT
TTTAGCTCAAACAATGAACCTGATACGTCGAGTGTTTAAAGAGGGCAAAG
TTATCAATAACTTCGTTTTTGTAGAGGTTGTGCCAAAATTTTGGAGCTTT
TGGCCCACACATTTTGTTAATCCTATTGTAAAGTTATCATTGGCAAATTA
TTGACAAACAATGATTATTTATTGAATCTATTTTCATCCAACAATCTCAG
TTGTCATTGTAGAGTTATGGAGCGTTGTTTCCTGTTTTTGCTTGCCTTGA
TGGGTACTTATAAACATCGTTTAATAATTGTTGTGAGGGACTTGAGAGGG
CAAAGGGGAATTTCAACATTgtctttttctgataaactCCGGTGGCCTAT
TCTTGtgattgatattattttttgaacGTCACAATCAAGTTTTTGTGGTT
TAAAGCCAGCCAAGACTCGCCAATTTTTTTCTAGTTTCACAAGAGCCTCC
TTGTTTTCTAGATGAAGTCACGATGATGAAGCCTTTGAGGCAAAGTAAGG
CATATCGAAGATATATCAAGCTAGGGCCCATAATtaagggttttgttttt
aaataagagtgaaatCGCTTgctttactcatcaattttaattcacaagct
ttttcatattggattgacacgaatgtggagcaagattggtcagaaagagg
aaaagaaaaacaatcttTTGCTTagatcagcataatataacaataggaag
acactgttctgatatgaaacatgtgtctgatatgaaacgggaacactcat
ataaaaataaaacctttaaggttTCTTTACCCGCTTGAAATGACTTCAAT
AAGTTAGGCCCTTCTCTATTAGaccttttgttttttataaagacCTTTTG
TTTTCTTACTAGTATATAGTATGTTTATTAGATCATATGGATAATGTTGA
CTTCGAAATTCGAGTCATTTTCTTGATTTGTGAACCATTTTGTGTGTAAT
ATTTGTTGTCGATTTTTGGTTGGCTCACAAATCATttctaaaatatcaaa
agatgaGGCACTCTTTCATCGGCCTTAAAAATAACAAGTGTTAAGTGGGA
TGTTTTGATGGTTCTTATGGGCACTCTTACCACGTGTGTGTAATCGGCCA
TCATTGTCATCATTATGATTTTGTCGGCTGGTTAGGATTATTCCCCCTAA
TCACAAACTATGTATATTCCTATGGAATTGGCTTTCTCtcaccctccccc
ccccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTttcgagattttttccaacccacccgcttattccaaaccccccggc
tattaggaaCCCAAGAGTAGTTTCCTTTGAAAAGGAAAGCGATTTTATAT
AAAAGCGAATAGTACCCTTATTGTATTCATTATTCGTGCGTCTGAGGAGG
GcggacttttttgaaatttggacaaaGTAGCTAAATTATGAATTGTCACC
TTCGGATAAAATCTTTTCATTATTAATAGAATTCTACAGTTTTTGATGTC
CGACTTGAAAAAAATGCGAATCATTCTCGGTCGTCAATATCTatcattgg
tcaaaatttcaagctcTTAGCGCTTCCCATTCCTGAAATCAGGAGTTGCA
CGGCTCTTTCCGAATTTTTCGATGCGATAGcgaactcgaacccagtccct
ttgATCGctatttttatgattctgattgCACGTCCGTCAGTAAAATCAAA
TAGTGGTGCAAGTGGCTATAGATTTTtgtgatacacgcttttttataaga
atggtgtaaatccatttcattatggatattcttagcttttttcggaaaat
catccttaaatattcttacagcattcttaggttaagatcctaattcagac
tagatctAACATTTAATACAAGCGTCGTCAAgcataaaattgcatttttg
tgaaaatagtTAGCCTTACTTacttataattgaaaatgctttaaaaatgg
cattcttagcctgtcttagcttgagtagcaaaattctatgattgtggtat
tcttagcatattcttatttttttgcccattttcacCATGGACATTCTCAT
AACgcgtattcttataaaaaaagcgtgtagtgcATCACCAGGAATTGATA
CTATAGTAGGTCAAACAAAATGAAACGAAACCTAAAATTACATCGATATA
ATCTTTAGTTTCCTTTTAACatataatttattttgaaaatatgtctCAAA
TTGGCTTTAACATATtatattaattttgaaaatatgtctCAAATTGGTCG
ACGAATATCTACTTTTCTAAATACTTTTATCAATATCTAAAGTATAGGCT
TCCGTTATCAATTATGTCTGTAACCCGATCTATAACATGACGCCATCGAA
AGCTAATCCTATCCATGCAAGTTTGTTTTCACAAATAATGGACGAAAACA
AGTTAATCTGAATTCGTGTTGAAAGTATTCATCCCTCATATTGCAACTCT
TATATCCTGTTCCAACTTGCCTCCTCTGTTCTTTGATTGCCTTTTAGTGA
GGTAAATATTGACCAAACCTATCAGTCTTCTATATGAAGTGTTCGCAAAG
AGTAATCGATGTTTATGCATCTTATAATTAGCAGGACAAGCAGTAAAGTC
TGTTAAAAGTTCAAAAGTTGGTTTGATTTGATGGGAAAGTTGTAAATTTA
TACATGTCAATATTCGTCcttgaaaataaagttttaaaaaagagAGCACG
TTTTCATTGGTAGCCAAATTTTACTCAAGACAAAACTGTCAGAAAGAGTA
CATTGTTTTTTTCATCACGATGGCATCGTCTTTCACATCCACGCCCATTC
CGCCCACGCCCATTCCGACTGCGAGGCATCACCCAACAATCTATCCAGAA
GTCCTCTACGTCTTCATCGCCCTCATCATTCCGCCCAACGCCCTCATCAT
GACCGTCTTCTTTCGGAATCACCATATTCGATCAAACCAAGCCAACAAGT
TCATCTGTTCGCATGCTTTCTTAGATATCCTTGTCGGATTGATTTTCATC
CCGTGTTTACTTGGGTTAAATGCTGAAGATAATTTAATCAAAGGTGGTAT
GATCATGTATTCTCTTCTAGTCTCTTTGCTTATCCTACTCTTCTCAACGT
NGTATGATCATGTATTCTCTCCTAGTCTCTTTGCTTATCCTACTCTTCTC
AACGTTCGATCGCTACATTGCTATATGTAAACCACTCCATTATGAGAATA
TCGAAACCGACGAACGAGTTCGTAATATGATTCTCTTTGCTTGGTTGTTT
CCCTCCTTGGTGGTGGCGCTACCGTGGATTTGGCTGGCCAAAGAGGATGA
CAGTACTTTTCTGAAGACAGAGCATCGTGCTTACCTAGGAGTAGTAGTGT
TCGGTATCCTAGCTATATTGTGCATCATTATCTCCGCTTACGTCCGTATA
TTGAAAGTCGGTATCAAACATTTACGGGAACAACTCATGTTACGTGAATT
TGAACACTGGACACGACGTTTACCTATGGAAATCAAATTCTCGCGCATGT
TTTTTTCGCTATCCTTAACCTTCTTCGTCTTTTGGGTACCGACCGGTTAT
ATGACATTAACGGACGATATTTTACTAATCGGAGCTCCTCCCACATGGCT
TCAACAGATGAATTTCTATTGGGTATTTGTTGCCAGTTTCCTTAATCCGG
TCATTTATGCGATTTTTCACAAGAGGTTTCGAAAATGTATTAAAGTAATG
TTCACTCAAGGCCACAATATGTCATCTGTGGTTCACCCTATCATGGATGG
CGACACGTCAAATATCCGTAAAAGTTTCCGTAAAACACGACTATCGACCG
AAAACGAAAGTTTATAATGGGTTGTTAGATTAGAACTAACactgatttta
ttgaaaaaagaaaaatatttaaacacaTTTTTGGAACCCAAAGTTCATCT
TCTCACATGGTGGTAAAAGGACTCGACTTCGATATTCGATTTGGATGCAC
TAccttaagttggtctaatgtcgacatccctcatcgaATTTCGACAACCT
TCTCTTTAGAGTTTGGAATAATAGGACGATCGTTGCAGATGGAAACTTTA
TCTCCTACCCTAGCGATCAGAGAAAATATTATGGTTTATCaacgattccg
accttcctactattcctatctctaaaaaagggtgtcggaattggaagagg
gatgttgacattagaccaacttacggtactcaTTCCGTGTGGGTGTGTTC
AATTGACGGTCTAAAGCACGAAATagaaagattttttccaaaatgaagaa
aaaaggaaaCTGTACTTTAATTGTCATTATATCCTGCGTATGCTAAAAAG
TTGAGTAGAGTTAGGTTTTTTTCTCCCTTAAATGGTAGGGCTGGGCCCAT
GTTTTATTTCTTTGTAACATTTTAAAACTAATTGTTTTATTGCTATATTT
CTTCCTACCATAACatatgtttgaaatttttggaggtcgtttttcgaaat
ctaaCCTTTTCCTTCCAAGATTTTATCTAAAAGTGCATTTATCATGATTT
TCTTGTAGCTTGTAGTTACAATAAACAATCGTATACTTTCTCTTTTTCGT
GACCTTCCTCGCACTCAAATTTTCTGCgaataatttaaaaagtttaaatc
cCTTTATTCTGTTCTAACCTTTATTTCGTAATCGATTGGCACCCGGGAAT
CTAAACCTTTGCAACTTATTTGTATTTTAACCTAAGGGCCTTTTTAGACT
GGCATATATTTAGATAAATATATTCAATAATATTATTTcatgaatttaaa
ttaaatgTCCTGATatcattttaaacattttgttcaataaATTCTGACTT
TAAAACCTCGTATGAGTTGGGAACCTTATCAAATTCGAAAAGTTGTAGAT
CAAAAAATAGAATCTACTATAATATACTAATATGTTATTATTATAAGGAT
TTCTCTCTGattattaaaattcaaagcACTTCTATTTTTAGAAGTCGAAA
ACCGTCCAAAGTTTTCTCCTGGGTCAACCGGTATGTTTATTACGTGTGTT
ATTAATAATAAACATTATaaaccttatcggggaaaattttcgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034236XLOC_034236Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054283-exon-scaffold_242-1491911889:1581341..1581366TCONS_00054283-exon-scaffold_242-1491911889:1581341..1581366Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1510915933:1581341..1581366TCONS_00054283-exon-scaffold_242-1510915933:1581341..1581366Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1575043694:1581341..1581366TCONS_00054283-exon-scaffold_242-1575043694:1581341..1581366Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1491911889:1581976..1582189TCONS_00054283-exon-scaffold_242-1491911889:1581976..1582189Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1510915933:1581976..1582189TCONS_00054283-exon-scaffold_242-1510915933:1581976..1582189Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1575043694:1581976..1582189TCONS_00054283-exon-scaffold_242-1575043694:1581976..1582189Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1491911889:1582673..1582772TCONS_00054283-exon-scaffold_242-1491911889:1582673..1582772Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1510915933:1582673..1582772TCONS_00054283-exon-scaffold_242-1510915933:1582673..1582772Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1575043694:1582673..1582772TCONS_00054283-exon-scaffold_242-1575043694:1582673..1582772Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1491911889:1582972..1583017TCONS_00054283-exon-scaffold_242-1491911889:1582972..1583017Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1510915933:1582972..1583017TCONS_00054283-exon-scaffold_242-1510915933:1582972..1583017Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1575043694:1582972..1583017TCONS_00054283-exon-scaffold_242-1575043694:1582972..1583017Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1491911889:1583244..1583487TCONS_00054283-exon-scaffold_242-1491911889:1583244..1583487Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1510915933:1583244..1583487TCONS_00054283-exon-scaffold_242-1510915933:1583244..1583487Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1575043694:1583244..1583487TCONS_00054283-exon-scaffold_242-1575043694:1583244..1583487Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1491911889:1597632..1597733TCONS_00054283-exon-scaffold_242-1491911889:1597632..1597733Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1510915933:1597632..1597733TCONS_00054283-exon-scaffold_242-1510915933:1597632..1597733Clytia hemisphaericaexon
TCONS_00054283-exon-scaffold_242-1575043694:1597632..1597733TCONS_00054283-exon-scaffold_242-1575043694:1597632..1597733Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1581341..1597733 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.32369	1.49252	0.771871	0.196232	0.434947	0.0809039	0.354361	0	0.249673	1.21085	1.45717	0	0.249524	0.238309	0.20928	0.247141	0	0	0.498874	0.483688	0	0	0	0.366227	0	0	0	0	0.347379	1.70931
Blast
[Close]
BLAST of TCONS_00054283 vs. Swiss-Prot (Human)
Match: PTH (Probable peptidyl-tRNA hydrolase OS=Homo sapiens GN=PTRH1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.385e-33
Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 3 
Query:   24 IIAGLGNHFAKHSRHSVGMRICDSLAKKHNL--SWSYERKYKAFTTALSVQDHQFILFKSKWPMNLNGRSLEKIVSDLSVDINKVTVLHDELDRNLGKCRWKLEGSANGHNGVKSVIQSLKTDKFRRLRIGIGRPINKSDVVDYVLSDFTAAEEQEFFEVATRCIEML 521
            ++AGLGN     +RHSVGM +   LA++  +  SW+ +R   A      + D Q +L + +  MN NGRS+ +      +   +V ++HDELD+ LG+   KL GSA GHNGV+S I  L ++   RLR+GIGRP +   V  +VL  F+ AE++    +  R  +++
Sbjct:   32 MVAGLGNPGLPGTRHSVGMAVLGQLARRLGVAESWTRDRHCAADLALAPLGDAQLVLLRPRRLMNANGRSVARAAELFGLTAEEVYLVHDELDKPLGRLALKLGGSARGHNGVRSCISCLNSNAMPRLRVGIGRPAHPEAVQAHVLGCFSPAEQELLPLLLDRATDLI 199
The following BLAST results are available for this feature:
BLAST of TCONS_00054283 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTH2.385e-3336.90Probable peptidyl-tRNA hydrolase OS=Homo sapiens G... [more]
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