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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054284 ID=TCONS_00054284|Name=TCONS_00054284|organism=Clytia hemisphaerica|type=transcript|length=530bp
ATCAGTAACAAAGTTGATTCTTGGAATGGAAGAGCCATCAATCTCTTCAA
AGATTGAAAATGAGACAATAGCAAACTCTGGATGGTCTTTGCCATCTGAT
GTTGAAGATACACCATCAGTAATGATTTTGACAATTCCATTGACAACTTC
GATGATCAAATCTTTGACTCCTTTGATGACAactttttggacattttcca
aAGCAGCAAGGATTTGAGAGAAAAAGAATTCAGCATCCATCAATTCAGAA
TCTTCTGAAAGAGCAGCAAGTTCTTTAACAATCTCATCCTCTTGAAGATC
TTCAACAACAATCTTGACAATATCTCCGATGATTTCAATAACGATTCTCT
TTCCCTCGTCAATGATCACTTTCTTGACTCTGGTCAAAGCATCTGTTACT
TTTGGTTTGTATTTCTCGATCAAAGCTCTGGTTTGGTTGCTAATCTTGTC
TCCAGCTTTTTCGAAAGCATCGGTGACTTTCTTCCATGCTGAAATTTGAA
GATGAAATTAATATTatgattttgaaaaag Run BLAST on NCBI transcript from alignment at scaffold_242:1606172..1606952+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054284 ID=TCONS_00054284|Name=TCONS_00054284|organism=Clytia hemisphaerica|type=transcript|length=781bp|location=Sequence derived from alignment at scaffold_242:1606172..1606952+ (Clytia hemisphaerica)
ATCAGTAACAAAGTTGATTCTTGGAATGGAAGAGCCATCAATCTCTTCAA
AGATTGAAAATGAGACAATAGCAAACTCTGGATGGTCTTTGCCATCTGAT
GTTGAAGATACACCATCAGTAATGATTTTGACAATTCCATTGACAACTTC
GATGATCAAATCTTTGACTCCTTTGATGACAactttttggacattttcca
aAGCAGCAAGGATTTGAGGTTTGTATTGTTCGATGATTTTTTGTGTTGTA
GCTTTTACTGAATCGACCAAGCTGTTGGCTGCAGCTTTCACCTTTTCCCA
TACTAAAGAGAAAATTGATAGAGATTTCTTTGAAAGGTTTTAAAGACTAC
TATAACGTTTTCTCATTGGGAAAGTTTTTTTGGCTCTTTAAAAACCGGAA
TTATTTGAGAAATATTAGACCCCGGATAGGATTTGTGTTTTTGTGAATAA
AATATTATCTTACATTCAGAGAAAAAGAATTCAGCATCCATCAATTCAGA
ATCTTCTGAAAGAGCAGCAAGTTCTTTAACAATCTCATCCTCTTGAAGAT
CTTCAACAACAATCTTGACAATATCTCCGATGATTTCAATAACGATTCTC
TTTCCCTCGTCAATGATCACTTTCTTGACTCTGGTCAAAGCATCTGTTAC
TTTTGGTTTGTATTTCTCGATCAAAGCTCTGGTTTGGTTGCTAATCTTGT
CTCCAGCTTTTTCGAAAGCATCGGTGACTTTCTTCCATGCTGAAATTTGA
AGATGAAATTAATATTatgattttgaaaaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054284-exon-scaffold_242-1491911889:1606172..1606389 | TCONS_00054284-exon-scaffold_242-1491911889:1606172..1606389 | Clytia hemisphaerica | exon |
| TCONS_00054284-exon-scaffold_242-1510915933:1606172..1606389 | TCONS_00054284-exon-scaffold_242-1510915933:1606172..1606389 | Clytia hemisphaerica | exon |
| TCONS_00054284-exon-scaffold_242-1575043694:1606172..1606389 | TCONS_00054284-exon-scaffold_242-1575043694:1606172..1606389 | Clytia hemisphaerica | exon |
| TCONS_00054284-exon-scaffold_242-1491911889:1606641..1606952 | TCONS_00054284-exon-scaffold_242-1491911889:1606641..1606952 | Clytia hemisphaerica | exon |
| TCONS_00054284-exon-scaffold_242-1510915933:1606641..1606952 | TCONS_00054284-exon-scaffold_242-1510915933:1606641..1606952 | Clytia hemisphaerica | exon |
| TCONS_00054284-exon-scaffold_242-1575043694:1606641..1606952 | TCONS_00054284-exon-scaffold_242-1575043694:1606641..1606952 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_242 | supercontig | scaffold_242:1606172..1606952 + |
Blast
The following BLAST results are available for this feature:
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