TCONS_00054365 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054365
Unique NameTCONS_00054365
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length705

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054365 ID=TCONS_00054365|Name=TCONS_00054365|organism=Clytia hemisphaerica|type=transcript|length=705bp
CTGGAGTTGTGTTGATCGATCATGTCTCAGGTGTAATTTAGGATcagatt
tttatttatattgatTCTTAATCTTTTTGAATTGACCAGTGGCTTTACTT
TGAATTTGATCATCAATCAGtaaaatcaataaaattcaaattgcTGCAAG
GAGAATATTCAGGTTGAAACAACACATTATGGACCCCTCTAACCCACAAA
TTATAACACACGTTCAAAAATCACTGAACTACACATTATTCGACGCTAAA
TTCGTTCCAAGAAGTGCAAAGTTTGTTTGTGTTGGATCAAAAGCAAATGG
AAGTGGTGTCATCCAAATGTATGAATTGACCCACAACGAAATGAAAGGAA
ATGTTAATCTTCTAAAAGATtTGGAGAAAAGCAAATCTTTTAAATGTTGT
ACTTTTGGTGCATCCAGTTTAAAGACTAGATTCCTGGCTACCGGTGATTT
TGATGGAAAACTTGCTATATGGGATCTTGAAAAGCCATCATTACCAGTAT
ACAGCACAAAAGCTCACAAAGAAATCATCAATGGTATCGATGGTATTGGA
GGTCTGGGGATAGGAGAAGGAGCTCCGGAACTGGTCACGTGTAGTCGAGA
TGGTTCAGTGAAAGTATGGGACCCTCGTCAGAAAGATATTCCTGTTGCAA
ATATGGAAGCATCCAATCAAGACATGAAAAGAGATTGTTGGTGCGTCGCC
TTTGG
Run BLAST on NCBI

transcript from alignment at scaffold_242:902978..915966-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054365 ID=TCONS_00054365|Name=TCONS_00054365|organism=Clytia hemisphaerica|type=transcript|length=12989bp|location=Sequence derived from alignment at scaffold_242:902978..915966- (Clytia hemisphaerica)
CTGGAGTTGTGTTGATCGATCATGTCTCAGGTGTAATTTAGGATCAGATT
TTTATTTATATTGATTCTTAATCTTTTTGAATTGACCAGTGGCTTTACTT
TGAATTTGATCATCAATCAGGTGAGTTGAGAATCGACTTCCATTCATTCT
AAATCTAAAGTTGTGGACGAATTAGCTACCCTTACCGTAAGCGTAAGCAG
GCAGTCAGGGCCTCCTTCTTGGTCTTTTTATATAACATTAGTTCGGATAG
AATAAAATCATACCTGATCAACACAACCAAAGCTTCTGTCTTGTGTTTAC
TCTTTCCTTCCCAACAACTTTCGTTTTTGGTTATTTTGAGTTTTTTTCGA
ATAAATGGGGGGGGGGGGGTGGAAAAATTTTCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAAAT
GGACCTTTAAACCAGACGCCCGCGCTCAATAGGATCGATCATCGGAACGG
CTCGATGACGGATCGATATGTGATCGATGGAGTCGTAGAGTCGTCTAATC
TTGACATACGTCTTGCAATCTCGAGACCAATTCACTGTGATGTCATTATG
TTTTGGTTTGTCTTGTTTAGTCTAGCAAAGCTGCATTGAAATACAGGATA
GTTGAGACAAATGCCCCCAATTTTGCCCCCAACTTTTGTCTCTTTTACCT
TGGTTTTCAAGCTGAAAATCTTAAACAAAAGTGAGACCAAGCGAGATCAC
AAAAATAAACCAAAACAAGTAAGAAGTGGTCTAGACGTATGTCGATATTA
AACGACTCTACGGTACTTATCCGGATAGGAGATCGATATACGATCAATAC
TCAAGGTTTTTTTAAGCTTATGATTAGTTATCGATTATTTATTGATCTAT
CATCGATTAACGATCGATGACGAATCGGTTATACTCAATTGAAATACTAG
CTCGATAATGGATCAACGAAGGATCGATACTCAAGACTTTTTAATGGCTG
AATCTTCCATCGATCTCGTATCCGGATCGTTAAGTAATCCATCGATCACA
TATCGATCCGTCATCGAGCCGTTCCGATGATCGATCCTATCGAGCGCGGG
CGTCTGGTTTAAAAACCCTAAAAAGGGTCAAAATAGACTAAATTTAGGCT
TTTTAGAGTAAAACAAGGAATTTTCCTTTTTGTAGCTAGGAATTTTTTAA
AAATGAATAAACAGGGGGGTCCTAATAAGGTCCGGGGGTTGGAAAAAAAT
CGAAAAATTAACAAGCGGGGGGCCCGTTTATTTGGCACCTAAGAGTAACA
TATTACATACATATAATAAGCTTATATTATCAATAATACACTTTTAATGC
TATATGCATGTTATGTGTTATACGTAAGTAATATACATATTACAATAGAC
CTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTCCAGCAGAAA
AACAATGATAAAACCATGCATAATTATTACAATATGCATGATACAGTAAT
TATGCATGGTTCTATCATTGTTTTTATATTATATTTAACAATTATATTGA
AAAGTAATAATTCGCTATAAGGAAAGATAACTTGTGCGGAAAAGAAAGTC
TTCATTTATTGACCCCCGGATTTTTCATCGCATAATTTCTACGGGAAATC
GAAAGTAATTTCGTTTGGCTTGTGATGTTTGAGAGCTTGGACGTTGGGAA
GCTGCAAGGATAAAGGTAAACAAATTATAGTCTTTTTTCTGAAAGAAAAT
TTAACATTTGTCTAGGCTGACTTTCTTTCCGCCATCACGTTGATATCGCC
TTCCCACCCGTCTTCGTTGAGTTTCTGTCTATTTGCACCAACATTGAGTT
TGTTCATACCCGCATTGATATTGTTAATCAAAACGAAAGTTAAAAAGACG
CGATGAAGTCGCAACATTTTGAAGGAAATGGCAGCACGCTGGCCAATGAA
AAAATAGTTTTTTTATCAAAGCTAATTCAAAACTGTACTTTTGAAGTTGC
GAATTTGTGCTCAAAGGTGAAAGCAAGTGAAATTGTACCGTGAGTGGTCC
TAAATCCGACGGCCCTGCCTAAATCCGATGGGGTCTTTCAAAGATACAAA
CTAAAATAAAAACAAACCTTTTGCTGTGACGCAATGAAGATACCAAAGTG
TCAACTGAACTGAGAGATTTGATACACTGAACCAATTGAACCAAATAACA
ATAATTGCTTCTCATACAAAACATATTTCTTATTACAAAATTGTTAACGT
TTTAAACACAAAATAACAGATTCAGAATAATTAGAGGTAATTATTTTTTT
TGATCACATTAATTGACATCTTGGCATTATAGTAATCTTGTTAAGTGTTT
CATTTCAAGAGCTCTTGCAATAGTTTATTGTTCAACTTGGAGAGGGAATG
TTTGTAAAGATATAATTTTTTTCATAGCAGTTATTTAGGCAGGGCTGTCG
TATTTAGGACCACTCACGGTATGCTTTCAGTGGAGTTTGTGGACAAAATC
AGAAAGAAATTGGCTGAAAAGATTTTCGTCCCAATACTTGTTTTTTTATC
GGTATGTAGTTGGACCCCCCCACCCCCTTATCGGCCCAATGCCAATAAAA
AATTCGAAAGTGTTTTGTCGAGGGTCCCTTAATTGTTTTAAAACATGTCA
ATATATATCCAGTCACATGATTAGCATCCTATTGAGTATGAAAAAACATT
TTGTTGTAAATTGGTTCAGAGGCCTTATATTTCATGATTTTGACAATATT
TTTGACATTTAATATCATTTTGTCAAAATTTGTGGGTGATATATTATTTA
AAAATTTTCATGATAATACTTATTCGTATATAATTGCTTTAGACATACTA
TACTAATAGTACTAGTACTATTTCATGTGTTATGACTATGTAGTACGTGT
TATGAATTTTACATTATGATATCGTTATATTTTTTCCAGTCTATAATTTG
TATGCCCCGTGACCAGTGCCCCGTACCCCGTAATCCGTGCCCTGTGACCC
GTGTTTCGAACTAGCCGGAACTTTCCCGTGGGCATGATTGGGTGTACCGC
CATCGTGAAATATTTTTCGTGAGATTTTACCGTATTCTAACGCTAATAAA
ATCTAGATAGGAAACAAATATTACATTTGATTCTTTTTTTGTTCGTATTT
CTAAATTTCACGATAAAAAGAACTATTTACAAATTATTTTCGACATTGAC
ATATTTAATGATGTCATAATCAATGCCGTGCATATTTTGTCAGCACCGTG
CATATTTTGTCAACATCCTTTTCATTGGATAAATACCACTAAAATATACA
AGATAAGTAAACATAAATTTATCGAAAGCTTGAATCACTGATTGAAAAAG
AAAGATCAATTTCTTAACACTAAGCATAGAAGCATAGTTTCAACCTTACT
ATCAATTTCAGCTGATAAAAAGGTTGTCGGAATTAGAGGAGGGATGTTGA
CATTAGACCAAGTTACGGTACTGTAATGTATCAGACCTGCCTCTCTCCGT
TCAATGAGTTTTCACTACACCTATACAAACGCCTGATTGCAAACAACTCT
TGCTGCGGGTCGTCTTTTTGCGTCCAATCAGATTCTAGTATTTTCTCTCA
CAATCAAAACAACAATTTGTCGTTTCTGGTTGGTTCTGTTGCCTGTTATC
ACATGCGTTTGGTTTGGGAATGCGAAACACAAACGCGAACTAATCATGTC
TAAACTTTTCAATATATCTCCAGAACTAACAGATTTTTTGAAATTCTGTA
AAAAAGGTCCAAGTTCCTGAATATTTTTACTGTGTTCTGTGAAAAAATCA
TAACCATCAGTCAAATACTCGTTCATCTATTTAAGATTGAAGACAAAAAT
TTGCACAAAGAAAAATAAACCTTGGGCACAAAAAATGCTTTTTTTTCCAC
CAAAAAACAAATAAGTTTTATAGACTTACCTTCCCCAAACATTGAAGAAG
ACTCTCTACTAATTAAAGTAAATGAGACAAGATAAGATAAAACCTTAAAA
TCAACCAGAATTTACAACCTTTTGTCCAAAGCAAAAGACATGCTTTTCTC
GCCGCCATCTTGTTAATGTTTTAGAATGAGAATTATTTTCAGTTCCAGTT
CCCACGGTTTTTTTTTCATCCAATCAGATCGCGCGATTTCACTTTCGCTT
TCTCTAGTCCAATAAGACTGCAGGATTTGAGTCATGTGACATCTCTATTG
AAAAACCCGCACTGAATAAAATAGAAATACAGGGGGTCACACTATTGGCT
ACAGGAGCTGAAAGCAAACAATTAAGGCCAATATTTTTGGTTTTTCTGAA
GGACAAAAGGTATAGATAGGAAGCTTTACTGAAGGAGGGATAAGGCTGGG
ACTATCTATTTAAAAGATATGGACAAAAAAAGGCACTTTTTTGGGTGATA
ATTAAGATTTTACTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNACTGAAAATTTCAGATCAAAACAAACAAGG
AATTATTATTCAAAAAACATTTCAACAAATATTTTTCAGCATAAGCTTTT
CGTTTTATTAAAAAACATCATCAGTGCATATGTTTTTTTAATAAAACGAA
AAGCTTATGCTGAAAAATATTTGTCGAAATGTTTTTTGAATAATAATTAA
TTTTCTGGCTATTTTATTAAAACAAGGAATTAATTCCTGTAACTCGATGA
AAATTGGAAATTGCTGGTTTTTGACTGTTTCTGATCCTAAAGTGCTATTT
TTTGGTAAAAGCTATACAATTTATGTTTGGATTTCTAGAAAGCTTACCCA
TTCATTGTCAATATATTTTTTATTTGAAAGTAATCTCTTCATGGAATAAA
AAGATTTAATTAAAAATTTATAGGCCTATTTGTGGTAAAAAACTGATGGA
AAACAGGGAATTTCCCCACAATCTGCATTAATTTATGCAAAATTAAACAC
CTTTTTGACCACAAATAGGCCCATAACTTTTCATCTAGAGAAGTTGGGAC
TTTGGTGTAATACACTTTTTTGCTCAGTTTGAAGAGCTCTATCATGTGAT
ATAGGTCTTTTTTTAATTTGAAGACCCCCCAAAAATCATGAATTTCCAGA
CCTTGCAATTTTGCCTGGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCATGAATTTCCAGGCCTTGCAATTTTGCCTGGAAACGCAAAA
AATCGCCAATTACTCGTTACTTGCACGATAATATCGTGGAAACTTTTTGA
TTTTGGAATCTTCATATACTAATTCGTGAGTTTCCACCAAAAAAAGTTAG
TTCTAAGATGTGTGTCACGAAAATTGTTTTCTAGCCACTTTTTTCGATCT
CAGCAGCGGGACTAATTCCAAAATTTGTCTGTAACAAAAGTTTTAACCAA
AATTCAAAATTTCCAAGGTGAGAGAGAAGAAAATGTATGAATTTCCACGG
CAATTGAATTAAAAAAGGTAAAAAAGAGTGGAATTTCTGCGATGCATTTT
GCGAAAGTACATGGATTTTCATCAGAATTTCCGACCACCACTGGAAGAAA
AAAATATTTCCGAGGCTAGAAAAAAAAATACACGTTGTCCAACGAGAGTA
TATAACAAAAATTTTCTGGAATGGCCCATTGCTCTTGGGAGTACGAAACT
TTTTTGGCAAAGTTGAGCATGTTTTTACCGAGTTTGTTTGGAACAAAGCT
CATTTTTAGAATATATACATCTTTTTAAAGTCAAAATTATACTATATATT
GGCTTTAGAACCTTAGCTATTTTGAACCTGGAATTTTTGATATTCTGGCT
GCTGCTAGTCTGGAGATCCATACTCTCTAACCAAAACTTACACCACATAA
GCAAAAATACCATCAGAAGCTACTCAGTGAGAGTATGGTATTTATGACCC
AGTTTGAATTTGTTTACATTTGGTTTGAATTTCGTGCCAAAAAAGATTTG
CGCACTTCCAATCGAAACAATAGTATCACATGATTTCAACAATTGTTAAA
CAGCCAATAGAATTCTGCGACCAGATTTGGCATCTACAAAAATACCAGGC
TACTCTTTTATTTCTATATTATATATTATTCGTTTTAACTATAAATGCTA
TACTTCAAAACCACACGAACAGAGTAGACGGGTCTCCCAGCTAGGCTGCT
TCACGTTCGCAATCGGTCATTTTGTCTCAATTTAAAGTTTTTAAGTTTTA
TGATTAATTGTCTTGGGAACTTGAACTTGATTCAGGTATTCTCTCATCCT
TGTTGTTACAAATACATCCTGTACATAGCTGTCAACTTTTTCTGTATTGG
GCGGGATAGATTCCCACATGCTAACGTTTTCTCCCGTTGGAAAAAAATCA
GCCAAATCTCCCACATTTTCAGGATTTTTTTCGCATCTCCCGCATTTCCA
AAAATTTTCAGATTTCCTGAAGAAAAATTCAGGAATGCCAAAATTTTCTG
AATTTGGAAAATTGGGACAAAAAATGCCCAGATTTCCCGAAAAAATTTTT
TTTCCGGATATCTCGATATCGATTTTGCAGAAAAATTTCCCAGATTTTGA
AAATTGGATTCCCAGGGAAAATTTTCCGACTTGGAGCTCTCCCACATTTT
TAGCCAAGAATAGTTGTTTGGGAGAATGACAACCTTTTGAATAACTAATT
ACTGTACTGAAGCAGAATTCTTTTTAAATGATAACATTCATAATAATTGA
TTTGTCTTTTACAACACCTAGCCGTTGCCTAGATACAAGATAATTATCTC
GTTTGTACTGGCTGGAGTAATTTGTTATTCAGTAAATCATCTGTTGTAGA
TGAGGCTCCCAAGCGGTTTGCAGGGACTTTTGTCTAGCTTTATAATGTGA
TTTAGAAATTTTTTCTTTGTGGTTGTGTGAAAACATGATTGTGATTTGAA
AGATTTTTGAGCTGTGATGTGTGATTTTGACTTATTTCAAAGGGATAAGT
GATTATCCAAGTTTATTACTGTTTGCGTGATTGTGATTGAAAACAAATAA
TTGCATAATAATTGTGATCAGAAAACTTACTGCTGGGGGAGGCTCCGAGA
TTTTATGAAGAAACAACAAAATAATATCTCATTCGGATGAAAATTGAGTA
TATACCAGTTTGAGACAATTTTGGGTTGCAAAATGCTTTTTAAAGACCGA
TTTTGCAAGTCTATAACTTATAAACTGATGAACTACAAGTCTTCAATAAG
GCATCTTCAAAATATCTTTTTAGCAAGAAAAAAAATCATCTTTAACAAAA
AACAGCAGTCTTCTACAAAATAAGTTTAATAATGTGGACTGAAATTCTTT
TTAAAGTGACAGTATTCTGGAGGTGGAGAAATCAAAATCATTTGGGTCTG
GGATAGGTGCATGTTCGCCATCGTGGTAATGATAGAAATAACTAAGAGTC
TCAAAAATGGCAACAGGCATGGAACCAAATCTTTTGCAGTGTGATAGCAA
GGATTTATTATACACTGGATATACAAGTACCTGATTTTTGCCGATTTCTC
GTGTACTAGCTATGTCCGCAGTAATGATATTATTGTTCACTCTCNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCTCTCCTTCCCTCATTAAATGTTTTTTCGAAGCATTTTTATTGCATT
TCTTATTGAAAATCACTCATCCAATTCCCAAAAGAGACTTAAACTTTTCC
TGTGAGGGTCAGATTCTTCCACGTAATTGATAATTATAAGTCGTTATGAC
GTTTCAAGCTGTGAGAAAGATGCAAAAGACGTGTTGCGTAAAGAAATTGA
ATGTTGACACCGGAAATTTTCAAACTTCAACCTCAAAAAAACCACCTTGC
CACCACGTGCCTCCAAAGGATTTTCATACCACAGTGGAGCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTCTTGTCTAATGATGATTTTCTCACACCAGATTTCACA
AATGTATCCAGCTTGGTATGCTAGCCTTACTTTCAAACTTTTTTTTTGCA
AATGTACAAAAAGAAAGAGTTAGAGAACTTTTTGAAAATAAGACTGATAA
CCATTTTTTTAAATCAGACATCTTCGAGCCGCCATGACAGTTGTCCTTTG
CGGACAAAGCTTGAACATCAATTGTTTTCTGAAACAATGAAAATACAATG
ATCGCTCTCCATCGTTTTATGAGTCTTTTATCCAGTGTATAATAAATCTT
TGGTGATAGTATTCTGGAAATACTGCAGGAAAATCAAAATCATTTGGGCT
CGGAGGTTGGCTATATTCACCATCTTGGAATTCAAATCCCTGCCAAAATG
CAATATTTTGAGCAAAAACTCCTTATGTATGACTGGAAAAAACTTAAAAA
TGATAATAGACATGAACTTAATTTTTTTTTGCAGTGATAGTCTTCTAGAC
TTAATTGAATAAAATGCCTCACAATAGGTTGAATTCTCATAAAAAAACAC
ACTACATCTTGAATTTTCTAACTTTGCCACAAAAATGACTGTTGACGCCT
GCCCTATTAAAAACATATAGAGCCCAGTTGTATTAGCTTCTTCCCAGATA
AAAGACAACAAGATCAAAACATCACATTTACTTCATCCCTTAAATCAAAG
CGTGATGTTGGTAGAATTGACAACATGTTATGACATTTGATAATATTATC
CTCTCAAAAAATTCCCTATTTTGGCTGCTCGAAACTGCAAACTTAGAAAA
ATAGCTTTCAAAGAACTTGGCTGTTTAAACACAATGGTCTTTTATTTATT
TTCAGTAAAATCAATAAAATTCAAATTGCTGCAAGGAGAATATTCAGGTT
GAAACAACACATTATGGACCCCTCTAACCCACAAATTATAACACACGTTC
AAAAATCACTGAACTACACATTATTCGACGCTAAATTCGTTCCAAGAAGT
GCAAAGTTTGTTTGTGTTGGATCAAAAGCAAATGGAAGTGGTGTCATCCA
AATGTATGAATTGACCCACAACGAAATGAAAGGAAATGTTAATCTTCTAA
AAGATGTAAGATTCTATAAGTAGATTTGTTGTTTGTGATTTGTTATAATT
TTTATTTCTGGTATGTATATTTTTTTCCCTAAAAGGGTTTCATTTTGACA
GTAATTATGTTTTATATGGCGCAATAAATTACGCTTGGAGATGTTTTTGA
AATCCTCGCAGATCCTCCTGGTGAAAAAGAAAACATTTTTTGGCCGAAAA
AATAACGTTTGGATTTTTAGGGAGGTTTTAGGATTGATAATATTTATTTT
ATAGTTGGAGAAAAGCAAATCTTTTAAATGTTGTACTTTTGGTGCATCCA
GTTTAAAGACTAGATTCCTGGCTACCGGTGATTTTGATGGAAAACTTGCT
ATATGGTAAATATAATTTATGATCTCTGTGATATGTAAATTGAATAAGAA
AGGCGATTTAAAGAAAGTTTTGATTTTTATGTCAAATTTGTGAACAAGTC
ATTATGGAAATTTATAGATGTTAGCAAAAATACTTGTCCAAAAGAATATC
TGGGATTGAGGGCTTATAAAGCTGAATGGCCATACAGGAAAAGGAAGAGG
AAAAGTTCTCAACAATTTAAAATTTGTTGCAATTTCAGACAATAACGACA
AGTAGCTATTTGGCATAATAGTTATCTTTTTGTTAACTGGCCTTCTCGTG
ATTTTTCACCTCGAAATTGAAATTGATATACTTATACCAAGGAATTTGTA
TAGACATTGGATAAACGAAGAAGAGCGAGCATTGTCTTCCAATCAGTTCT
AATTGTTTCAAAAAACCATTAACATATTCCTATTCGAATTGAGACATTCT
TATTTAGACTGTCACAAAAAAGATGACATTGTAAAGATGTGCCTATATCT
TTTGGAGATTTTTTGAACTCTTTTTGTTTGAGCTAACTTAAGGGAACTAA
TAGACTTTTTCATAAAATTACGTCAAGAGCAACACTGACCTCGTTTTTAG
AATATTTCTGATTGTAATCGATTACCAGAGAGGAATTCATAAAAAGTTTA
CTCTGTTTATAAATAAAGGTAACTTTTAAAGAGTTAAGGGATTTGGTCAC
CTTGGCAATGGTTTCAAAACGTGGCATGAGTTAGACTGTAAATAATTTTT
GAAAAGGTTTATTATTAGTTCCCGCGAAAATTACTTCCTTTAAGGTAAGG
GAGAACTTTTTATATAAATGCTGTTATTCTGATTGCTTAATCAAAAATCT
CAAAAAAGGTGCCGGTGATACCTTTCTATGAGCACATCTTTTATAATGTC
ATTTTTTTTGTGTCAAACATTAAATGAATGTCTCAATTCAAAAGGAAAAT
GTTAATTGATATTCTAGCTTTGTCCGCAAAAAGGGCATGAGCTTTATTTT
TGAAAGTGATTTTAAGAGAAAATATCTAAAGAAAAAAAAATAATTATACA
GATTTCTCAAATCCAATGGTGAGAGGCTCTAGCTTTTTCACACATGCTGA
CCTAACCCACTTAATCGAAAATTAAACAACTTTTGACCATTTTGATTGAC
TTTCAAACAGTGTACCGGGAAGTCATCCTTTCTTTATCTTCATTTAGGGA
TCTTGAAAAGCCATCATTACCAGTATACAGCACAAAAGCTCACAAAGAAA
TCATCAATGGTATCGATGGTATTGGAGGTCTGGGGATAGGAGAAGGAGCT
CCGGAACTGGTCACGTGTAGTCGAGATGGTAATTTACGTTTTATTTGGAT
GCTTTTATTTCTCCCCTCCAAAATTTGAAAGCGTTCGTTATCATACTTTG
TCTTCATTTCAGGGTCATCATTCCAGCACCTAGCAATTTTCAAAAGGGCT
AATGAAGCCCATCGGGTTGCATACTATGTTTGCGCCGGAATACTCACAAC
TAGAAATAATGCATCATGGCCCCTGTGACTCGTTAAGAACTTTTTAGGAA
GATGGTGTAAAATTAAGGTCAACTGGAAATTTTAAGTAGGTCGAATTTGA
AAGTTACATCTCGAAAATCCAGTTGTAATTTGTAATTTTAAAATTGTCAT
TTCTATTCGGGATAAGAGTTTATTTGTGGGAAAAATTTCAGGGTTGTTAA
AAGACCTATTCAAAATATTATGCTCGGAAACTAAGCTCAGTGGATTTGTG
ATCAGAAATTCATAATGGCGGTCGAAAAACGTGCTCGGAAGCTCTGCAGG
CCTTCCAGCTTGGAAAATGTTTGAGTTTGGGGCTTGTCTTACAGAGCTTC
TTCTAACTAGGGACGATTTCGGCTGATTTTTCAAAGTGGGAGTCTTGATT
TTTACATTCTCTTCATTCAGGTTCAGTGAAAGTATGGGACCCTCGTCAGA
AAGATATTCCTGTTGCAAATATGGAAGCATCCAATCAAGACATGAAAAGA
GATTGTTGGTGCGTCGCCTTTGGTAAGGTTGATTCGTTACCATGACAGCA
AATTTTATCTCCTGAAAAATAATCGTTTGTACATCCTTAATTGTTTATAA
CCTTTCTAGATATCTTCTTTCAAAACAGATACATTTAAAATCCTGGGTAT
TAAATCTATAAAGCTTTTTAACCCTAAAACCCTTAAAAGGATTGTTTTGC
TAAAGTTAGTCACCCCTTGTATATCTGGGCTCTGACTTTCCTGAACTAAA
TTGGTTGATTAGTCTTGATTGCATAAACTTTTCAAGACTTTCAAGCTATT
CAGACTGTACCCAATCCCCTAATCCCGATGTGTCAAGAACTTGCCGAATC
CTGAGATTTATCACCACTTTAGCATTTCATAGTGATGTAGACGATGTAAA
CTTCTTCTGTTTTGGGCTTATTTCTTAGATAGTGATTTGTGTTAGACTAT
AGCATTATCTAATAGTGGTGTAAATCTCTCTCTTTCTTTATTTCCAGGGC
ACTCTTATAATGAAAGCGAGCGAATTGTCTGCGCTGGTTACGATAACGGA
GATATCAAGATGTTCGATTTACGTAACATGTCCTTAAGATGGGAAACACA
TGTAAAAAATGGAGTAAGTTACAGATATCATATTCTTTTACACTATTCCA
CTAGTCCGCCATATTGGTTTCTTATTTACCTTAGGTTTTCGAACGTTTCA
ATTTCAAAGCATTCGAATGGCGCTGTTGACTATTCAGCTTTATAAAACTG
GACACACTTTCTTTTATATGGGAAGTCCGATTAGCCAAAATGAATTTTTT
TGCAGAGAATGATCAATTGACTTAAAATTTGGCGGGAATTAATTTAATTC
TATAATCTCATGGTTGATTGAAATTCGATTGACGTTTTTGCTTACGTTAA
TTTGTAATTTCCCGCGAACTTGTAATTTCCCTCCTAGCTNATTGGGGCTT
GTCTTACAGAGCTTCTTCTAACTAAGGACGACTTTCGGCTGATTTTTCAA
AGTAGGAGTCTTGATTTTTACATTCTCTTCATTCAGGTTCAGTGAAAGTA
TGGGACCCTCGTCAGAAAGATATTCCTGTTGCAAATATGGAAGCATCCAA
TCAAGACATGAAAAGAGATTGTTGGTGCGTCGCCTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034276XLOC_034276Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054365-exon-scaffold_242-1575043694:915847..915966TCONS_00054365-exon-scaffold_242-1575043694:915847..915966Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1575043694:906462..906711TCONS_00054365-exon-scaffold_242-1575043694:906462..906711Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1575043694:906112..906212TCONS_00054365-exon-scaffold_242-1575043694:906112..906212Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1575043694:904789..904919TCONS_00054365-exon-scaffold_242-1575043694:904789..904919Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1575043694:902978..903080TCONS_00054365-exon-scaffold_242-1575043694:902978..903080Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1510915933:915847..915966TCONS_00054365-exon-scaffold_242-1510915933:915847..915966Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1510915933:906462..906711TCONS_00054365-exon-scaffold_242-1510915933:906462..906711Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1510915933:906112..906212TCONS_00054365-exon-scaffold_242-1510915933:906112..906212Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1510915933:904789..904919TCONS_00054365-exon-scaffold_242-1510915933:904789..904919Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1510915933:902978..903080TCONS_00054365-exon-scaffold_242-1510915933:902978..903080Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1491911889:915847..915966TCONS_00054365-exon-scaffold_242-1491911889:915847..915966Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1491911889:906462..906711TCONS_00054365-exon-scaffold_242-1491911889:906462..906711Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1491911889:906112..906212TCONS_00054365-exon-scaffold_242-1491911889:906112..906212Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1491911889:904789..904919TCONS_00054365-exon-scaffold_242-1491911889:904789..904919Clytia hemisphaericaexon
TCONS_00054365-exon-scaffold_242-1491911889:902978..903080TCONS_00054365-exon-scaffold_242-1491911889:902978..903080Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:902978..915966 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.99646	7.96538	2.62505	0.299169	5.80706	3.90923	0.971481	2.61427	0	0.131015	0.879649	0.321802	0.277627	0.256395	0	0	0.608257	0.840382	0	0.00234886	0.677448	1.59013	7.95959	6.04335	0	0	0.720404	1.26561	3.99047	3.7838
Blast
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BLAST of TCONS_00054365 vs. Swiss-Prot (Human)
Match: WDR92 (WD repeat-containing protein 92 OS=Homo sapiens GN=WDR92 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 4.927e-65
Identity = 114/170 (67.06%), Postives = 136/170 (80.00%), Query Frame = 2 
Query:  194 PQIITHVQKSLNYTLFDAKFVPRSAKFVCVGSKANGSGVIQMYELTHNEMKGNVNLLKDLEKSKSFKCCTFGASSLKTRFLATGDFDGKLAIWDLEKPSLPVYSTKAHKEXXXXXXXXXXXXXXXXAPELVTCSRDGSVKVWDPRQKDIPVANMEASNQDMKRDCWCVAF 703
            PQII H+QK  NYT+FD K+VP SAKFV +G+ A G+GVIQ+YE+ H ++K    LL+++EK+K  KC TFGA+SL+ R+LATGDF G L IW+LE P +PVYS K HKEIIN IDGIGGLGIGEGAPE+VT SRDG+VKVWDPRQKD PVANME    + KRDCW VAF
Sbjct:    7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK----LLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172
The following BLAST results are available for this feature:
BLAST of TCONS_00054365 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR924.927e-6567.06WD repeat-containing protein 92 OS=Homo sapiens GN... [more]
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