TCONS_00054609 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054609
Unique NameTCONS_00054609
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1913

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054609 ID=TCONS_00054609|Name=TCONS_00054609|organism=Clytia hemisphaerica|type=transcript|length=1913bp
ACCCTTGAAAATCAATGCAAAATCAGCTGAtagctttgtttttttcaaat
gtttagcGTAGTATTTTCGGTCCGCGTTTTTAGCATTTACCGTTTTTAAT
TGGTCGAGCAAGAATCTGGAACGAGCCGCGTCCTGATTTAAAAATTCTCT
TGTGAAAGAATCTTCACTGGTCCAGCACAGTGAAAAGATAACCGAATTCC
TTGATCTTTACTTTGAAAGGCATCCAGTCACTACATCATAATTACCATTT
CCTACATTCAATTCGCAAAGAGCTGAAACATGTCTATTCAGATATTCCAA
GATTCAGAGAACATTCCAGGCCTTGGAAAGAAGAACAAACGAGGAGATGA
AAATGGAatgaaaacaaatataccaAAACCCACTAAACGTGTTGCACTTG
GAAATATAACAAATCAGGTTCATGGTCATGGAAGCAGAATTCAACCTTCA
AGAGCTGCAAAGGATAAACATAAGgccAACTACCATGGAACAAAATCTGA
TGAgtctaaagtttttgaaaacaaaccaaaaaGGACAAATAAATTATCTA
CATTAAAAGATTCTCCTATGATTCTATCCCTGACACCATGTACGACAGAA
AGTTTTGAAGATATTGATACAGATGAAGTATTACCAAACATTCTGAATAT
TGACCAAAATACAGATTCTGACTTTGATGTCCCTGAATATGCACAAGACA
TACATAATTATTTGAAAAAGGCAGAGatGAAGTTTTTACCAAAGagaaat
tatatggaaaaacaAGTTGACATAAATAAAAGCATGCGTTCAGTTCTTAT
TGATTGGCTGGTAGAAGTAGCAGAAGAATACAAATTAAATCCTCAAACGC
TTTTCCTGACTGTAAATTATATCGATAGATTTCTTTCGTGTATGTCAGTT
TTGCGAGGAAAACTTCAACTTGTTGGTACTGCTTGTATGTTAGTAGCATC
gaaatttgaagaaatataCCCACCAGAAGTATCAGAATTTGTTTACATAA
CAGACGATACATATACTGCCAAGCAGGTACTTCGTATGGAAAGTTtagtt
ttaaaaactttacaattcgATGTCAGTGTACCAACCTGCAAAGACTTCTT
GAACAGATATTTGTTGGCAGCAGGTGCTGCTGAAGAAAGTCAACTTCGTT
ATTTATCACAAACGCCGACCTTGCAACATTACAGTGGATATACGACGTTC
GAACTAAAGAATTGCGCTACCGATATTAGGAGGTTTTTCGCTAATGCACC
TAATCTTCAACAGCAAGCAGTTCAACAGAAATACAAAGCACCGAAGTTTG
GTTGCGTATCACAGTTATCTCCCCCTCAAACTCTCGTTCTATGAGATGTC
gattatattatttttatacGCTTGGGATTACGTTTTTACCGCAAATATTT
TTGATAGTTTTCACTGGTCCTGGTCTTGCCGTTATAATGTGCTGCTGTAT
CCTCCTCCAAAAACGCATGCGTACTTTGCACAAAGAGTACACTGGTTGCT
TCAGGAGAATTGATATACGATATCCTTTTCACACAACTGGATCCTTActg
ttttatcatttttgtttttcaccCTCCCccgttttatttatttcttactt
acttgcttttattcgtATTTTACAAACAACAGACTTGTACATATGGATAT
GAAAATTATTATTGtatattttatgatttattgCTTATCATTGTCAcatt
tatcattttttcttcttcttgatcaaattttacaaattcttTTTACGTCT
CGTATGTACATGTATAGATATTATCGTAATAAATTAAtactttaaaaatc
aattaagATGTTTTACTTTCTTTCTTATAACTTGATGTTAAAAAGTGTTA
AAGATTAATTTTGAAAGGTTTGACCATTTCCCCACTATTTCAAAGTCTTT
GCTAAAATGTAAC
Run BLAST on NCBI

transcript from alignment at scaffold_243:288224..295121-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054609 ID=TCONS_00054609|Name=TCONS_00054609|organism=Clytia hemisphaerica|type=transcript|length=6898bp|location=Sequence derived from alignment at scaffold_243:288224..295121- (Clytia hemisphaerica)
ACCCTTGAAAATCAATGCAAAATCAGCTGATAGCTTTGTTTTTTTCAAAT
GTTTAGCGTAGTATTTTCGGTCCGCGTTTTTAGCATTTACCGTTTTTAAT
TGGTCGAGCAAGAATCTGGAACGAGCCGCGTCCTGATTTAAAAATTCTCT
TGTGAAAGAATCTTCACTGGTCCAGCACAGTGAAAAGATAACCGAATTCC
TTGATCTTTACTTTGAAAGGCATCCAGTCACTACATCATAATTACCATTT
CCTACATTCAATTCGCAAAGTAAGTAAACCATTTTTGAAATCGAATGTAA
TAATTACCATTTTGAAAATCGAAGGCGAAACATTCGAATGGAAATGTTTC
CCTTGGAAACGATCTACTAACTTTTGGGCTCTGCTTCTAAAAAAGTGTGT
CAAACTCTTTTTGAAAATCGTCTGTTCTGTATGTTTTAGGAGCTGAAACA
TGTCTATTCAGATATTCCAAGATTCAGAGAACATTCCAGGCCTTGGAAAG
AAGAACAAACGAGGAGATGAAAATGGAATGAAAACAAATATACCAAAACC
CACTAAACGTGTTGCACTTGGAAATATAACAAATCAGGTTCATGGTCATG
GAAGCAGAATTCAACCTTCAAGAGCTGCAAAGGATAAACATAAGGTAAAA
AAATCAGAAGAATTCAGATAATTTAAGCTCTATTCCGTCCTATCATGCTC
CTATCAGAGAGTATACATATATAGAGCAAATCCAATTGCTGGGAAATCTT
AGATCGTTGGGAACCCAAATAAAACAGTCAGGCAATTGTAGTCACATCAT
AATTTATTGTAGGTGCAAAGTTGACGAACAATTTTCTTGTTATTTTTTAC
CTTGAGTGTTTGAATTTTGAGAATTTTCTGGGCCAGAAAATCGACGGCTA
AAGACCTACATTTTACAGACCAGATCTTTTTCTTAATGCTTTGATTGGTA
CATAAAATGAATATAATCAGCCCTCTGAAAATTTTCTATTTGCTTGGGCC
AAAATAATATGATCTGAGGCCTAGAATGTTACCCAAAACGTCATTAAAAT
GAATTAGGTATATAGGTCTGAAGAATTTTGGTTGCATGTTTTCAATCAAA
AATTTTATTGTCTGCAACCCAGTCTGACTAATTGAAAAAATTTAACTAAT
CAAACTTTATTGGGCAGTTCCAGAAAAAAACCATTACCCCATGTGGACGA
CAGGGTTTTTTGGATTTTTTTTTCACTTGGAAATCCTGATAAATTTGGAA
AAGGTTTCGGAAAATCCAGTATTTTTCCTCATTATTTATTACTGATTGGA
AAATCCATAAAGTTTGCTCTATTTTCTTGCTAAGTATGGGAAAATCCAAT
TTTCCCATAGAAAATCTTGAATGTTACGGAAATCTTGAAGTTTTTCAAAT
GTAAATTGTTACGGAAAATCCATGTCATCCACAGGGGGTAACGGACTACA
ACTTAAACCGCCCATTGTTACAATTAAAGTTTGATTAAAAATTAATCAAA
CATATCAAAAATTCTATAAAAAACAAACAATATAAAATGGGTATTTCAGC
TCAAGTATGGATTAAATAAATAAATTAAACAAAAATCAATTTTTAGGTGC
AAATACTATATTACTTTTGTGAAAGTTTTCACAAATTCTATGGAATTTCC
AATAGTCGCGCGGCTGAGGTCGAAAAAAGTGGCTAGAAAATGATTTTCGT
GATACACCTCTTAGATTCCACTTTTTTTTTTCCAAGTTATGGGCCTATTT
GTGGTCAAAAAGGTGTTTAATTTTGCATAAATTAATGCAGATTGTGGGGA
AATTCCCTGTTTTCCATCAGTTTTTTACCACAAACAGGCCAATAAATTTT
GATCTAGAGAAGTTGGGACTTTGGTGTAGTACACTTTTTTGCTCAGTTTG
AAGAGCTCTATCATGTGATATAGGTCTTTTTTTAATTTGAAGACCCCCCA
AAAATCATGAATTTCCAGGCCTTGCAATTTTGCCTGGAAACGCAAAAAAT
CACCAATTACTCGTTACTTGCACGATAATATCGTGGAAACTTTTTGATTT
TGTAATCTACACATACTAATTCACGAGTTTCCGTTGTTTTTTTTGGAATC
TAAAAGATGTATCACGAAATGAAACGTTTTTCGACCTCAGCCGCGCGACA
AGGGTTTAAAATAAAAAATTTAAGGAAATTTTCGTAGTATGTGAAAAATG
GATTTCAGAGTGCTTTTTTTATCTGAATATTCCCATTAACAGTAATATAT
CAATTTTTTCTGCAAGAGCTCTTTCTGAGAGTTTGGGAATAGCATGCAAG
CTGTACCAGCGTTTTTATGACTGCTCCAAGCAAGCCCACACCAAATTCTT
AAAATAATAAATTGAACCTGGATTGGCCAGTGCTACCAATGATTAATAAA
TTAAACATAATTTTTTCTTTGAAACACAAGGTTACAAAGACCATCAACAG
TTGTATATTTCATTTACCTCAACACAATCCAGTCTGACTTGACTGGAAGA
CCTTTTGACAGGTTTTAAGTATTATTAAATTAGTTTAACTATTGACAAAA
TGATAGACTTTGCACTTGTTGCATTACAAATCAGGATCTTGTGAGATGCT
GAAATAGTTAGCTAGGACAATGATACAAACTTAATTTGAAAGTAATGTTT
TTCTTTTTTAGGCCAACTACCATGGAACAAAATCTGATGAGTCTAAAGTT
TTTGAAAACAAACCAAAAAGGACAAATAAATTATCTACATTAAAAGGTAA
ATCCTATAGCATGGCAGTTTCTTGACTTTCTCAAGAGAATAAAGTTTTAG
CTGGGTAGGAAAAGTATTGTGCACTTCAGATCTTTGGAATAACAGCAATA
TCCTAATCATTCATTGAACTACTCGGGCCGGAAAAATATTTTGTGAGAAG
TGACTTTTGCAAATAAAATTTTCAATAACATTTCATGGAAAACTTTTTGA
ATTGTCATTTAAGTTATTTTATAGAAATAGAAATAGATTAAATTTTTGTG
AATCAGCTTTTTAGAATTTTTTTACAGGACTTTCCTGGACTTTCACGTAT
TGCCCAAAAATCACAGAATCTGCGAAAATTTTCCTTTAAACTAATTCTCA
GTCATTATTAATTTTCCTTTTAAAATTCACTACATGGATCACTATGCGAT
TTACAATGCAAAATCAAGCTACCAAAACTATTGCTTGCAATAAGTGCAAT
AATTTAGAAGAATCATGGTTACTTTTTTAATAAAAATCTGTATTCCAAAT
CTACCCGTTTTTAGATTCTCCTATGATTCTATCCCTGACACCATGTACGA
CAGAAAGTTTTGAAGATATTGATACAGATGAAGTATTACCAAACATTCTG
AATATTGACCAAAATACAGATTCTGACTTTGATGTCCCTGAATATGCACA
AGACATACATAATTATTTGAAAAAGGCAGAGGTAAGTTTTATAGATTGTC
AATGAGTTAATTTAATGGATCTCCCCCAAAAATATTTGCTAGCATTTCAA
TTAATAAATTATAACCATTGATGCAAAGAATCATTGGTTATTTCTTTTTT
ATAAGTAACCCACATCGTCCAGCATCGTCTGGACTAAGGCTATCTTTGTG
GAACAACATAAGGCATTGCATTTTGTTTGAAAACTTTGCTTTTCTTTTCA
GATGAAGTTTTTACCAAAGAGAAATTATATGGAAAAACAAGTTGACATAA
ATAAAAGCATGCGTTCAGTTCTTATTGATTGGCTGGTAGAAGTAGCAGAA
GAATACAAATTAAATCCTCAAACGCTTTTCCTGACTGTAAATTATATCGA
TAGATTTCTTTCGTGTATGTCAGTTTTGCGAGGAAAACTTCAACTTGTTG
GTACTGCTTGTATGTTAGTAGCATCGTAAGTCACATCCACTACTTCACTT
CATTTTTTTTCACACTGACTTAATCACTGTAAATCTGGCCTGATTTGGAA
ACTAAAAAGTAAGACCACTACCAGGCAGTATTTTGGGTTCTTTTTTATTT
TTCAAAGGAGTTATTGGTTTACCAAGAAAGTTCCCAATGTTCATTGCCTA
AGGAAAACCAAGCCACAAGACTTGAAAATTAAAGCTTAAAAAACATGTTT
TTATTTGAAACAAGCAAAAGAGGGTCTTCTGTCTTGTATGGTCAGTTACA
TTTTGTTTACTTCTCTAGGAAATTTGAAGAAATATACCCACCAGAAGTAT
CAGAATTTGTTTACATAACAGACGATACATATACTGCCAAGCAGGTAATT
TTATTGAAATGAAATTCCCTCATTTAGCTCCAAATAGCCTTATTTTATTC
TAATTTTGGTTAATAAAAGTAACTAATCTGGCACAGGAGCAATAACATAT
CTTTTGAATTTAAAATTTTTTTCTCCTATTTTGCCATGATGAACACATTT
TAAGCAAAATTTTGCAATTTCCAAAATCAATAATAGATAAACCCTTTTTT
GATTTTAGTTGTTTTTTTTTTAAGTTAGAGTTTCTCTCAACATTGCTCAT
GGGGTTTATTTTTTTCCGTTCCAGGTACTTCGTATGGAAAGTTTAGTTTT
AAAAACTTTACAATTCGATGTCAGTGTACCAACCTGCAAAGACTTCTTGA
ACAGATATTTGTTGGCAGCAGGTGCTGCTGAAGAAAGTCAACTTCGTTAT
TTATCACAAGTAAGAATTTCAAATTTTTCTTACTTGCTGATTTCTAAGAA
AGCTGAAGAGTTATAGTTCTCTTTCAATTTCTTTCCCTTCTATTTTCTCA
ATCAGGGAACGAGTTAACGATTTAGAAACTCGTTTGATTAAATATACGAT
GTATTTTCCACTCTATAGACTAATTTATAAGCTTCTATTTGCTTGGCGGC
TCAATAAGAAGCTACTTAGAAATTAGCTATTTTTTATATGTTGTATATCG
CGATTTTGCTGAGTTTTTAAATTTTTGCTTCGTACATTTCCAAAAACGCA
TCGCGAAACGCGATAAGTTAATTCGAACCCTGTTAATCAATTGAACAATG
AATATTATTTTCTATTCTTTCAATTCAGTATTTGACAGAACTATCACTAG
TTAACACTGACATTTGTTTAACGTATCGACCTTCAACGATCGCTGCTGCA
TCCGTATTAGTGGCAAATAATACTTTGAAATTGGAATCTTGGGCGAGTGA
TTTAACTCTTAAAATCCAAAGCTCTTGAATACTTTAGAGGACTAAAATCC
TCATTTCTATAAGTTCTTTCTACACAATTGAAATATTTTGTTTTTATCTG
CACTTAATGCTTTTACAGTGGCTTTTGCAAGTCGTCTCTTTTCTTGATTT
CGTTCGAACGGTCTGTTATATGTACTAACTTGCTCTTTGCTACCTTAGTT
CAAATGGGTCTAGGTCCTGATGGTTTTTTTTGCCTTTTGTCTCAATAACT
ACTCGTTACCAGAAGAGAAACCAAAAATCTCATATTACGCCTTAAACTTG
GCAGGAAAGTGAGTTTACCAGTCAGTGCCAGCTCTTTAATTATTCAGTCC
AAATGACAAGAACATAATTTCTAAGCTCTATTATGCGAAAAGTAATTTTC
ATAAAAACCCTGACTAATTATTTTGATTTCTATTTCAGACGCCGACCTTG
CAACATTACAGTGGATATACGACGTTCGAACTAAAGAATTGCGCTACCGA
TATTAGGAGGTTTTTCGCTAATGCACCTAATCTTCAACAGCAAGCAGTTC
AACAGAAATACAAAGCACCGAAGTAAGAATCTAATTTTCCCTTTTTCGTC
TTGTTTTAATCCTTTTTATATTCGGAGAGAGATGTCAACATCTCCATTCT
GAAAGTATGACTTTAGCCACTGGTGAACTTTTATTTTTGCCTATGTTTAC
CTGGTCAACATATTCTCCCCTATTTGAATCTGATGAATTAGAACCATTGA
GTTTCAAGCCGGAAGGGCTAGAGGTCAATCTCTAACCTTTCTCAGGCAAG
AAAAATTGAAGCCTTAAAATATGCGCCGTATTTTTGATGACGGATTGAAT
GTAGCAATTCCTTTGTTTACGAGTGATATATTTTTCGAAATTAAGCGGTA
AATTTTTGTTTCAATCTGTCATTTGTGTAAAAACCAGGCGGGTCGCTCAA
GGCCGTGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACCAAAGAGA
TTGACATCTAGCCCTTCGGGCTTGAAACTCAATGATTAGAACATCTAAAT
TTTGCTACGTGAAGAATTTTAATCACATTTGTGTCTCTCAAACAAAGTTT
CTTATCCACAACTTTGTATTTTCTTTGCAGGTTTGGTTGCGTATCACAGT
TATCTCCCCCTCAAACTCTCGTTCTATGAGATGTCGATTATATTATTTTT
ATACGCTTGGGATTACGTTTTTACCGCAAATATTTTTGATAGTTTTCACT
GGTCCTGGTCTTGCCGTTATAATGTGCTGCTGTATCCTCCTCCAAAAACG
CATGCGTACTTTGCACAAAGAGTACACTGGTTGCTTCAGGAGAATTGATA
TACGATATCCTTTTCACACAACTGGATCCTTACTGTTTTATCATTTTTGT
TTTTCACCCTCCCCCGTTTTATTTATTTCTTACTTACTTGCTTTTATTCG
TATTTTACAAACAACAGACTTGTACATATGGATATGAAAATTATTATTGT
ATATTTTATGATTTATTGCTTATCATTGTCACATTTATCATTTTTTCTTC
TTCTTGATCAAATTTTACAAATTCTTTTTACGTCTCGTATGTACATGTAT
AGATATTATCGTAATAAATTAATACTTTAAAAATCAATTAAGATGTTTTA
CTTTCTTTCTTATAACTTGATGTTAAAAAGTGTTAAAGATTAATTTTGAA
AGGTTTGACCATTTCCCCACTATTTCAAAGTCTTTGCTAAAATGTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034413XLOC_034413Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054609-exon-scaffold_243-1575043694:294853..295121TCONS_00054609-exon-scaffold_243-1575043694:294853..295121Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:294478..294682TCONS_00054609-exon-scaffold_243-1575043694:294478..294682Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:292376..292460TCONS_00054609-exon-scaffold_243-1575043694:292376..292460Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:291691..291857TCONS_00054609-exon-scaffold_243-1575043694:291691..291857Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:291247..291470TCONS_00054609-exon-scaffold_243-1575043694:291247..291470Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:290878..290953TCONS_00054609-exon-scaffold_243-1575043694:290878..290953Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:290463..290597TCONS_00054609-exon-scaffold_243-1575043694:290463..290597Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:289400..289533TCONS_00054609-exon-scaffold_243-1575043694:289400..289533Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1575043694:288224..288841TCONS_00054609-exon-scaffold_243-1575043694:288224..288841Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:294853..295121TCONS_00054609-exon-scaffold_243-1510915933:294853..295121Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:294478..294682TCONS_00054609-exon-scaffold_243-1510915933:294478..294682Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:292376..292460TCONS_00054609-exon-scaffold_243-1510915933:292376..292460Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:291691..291857TCONS_00054609-exon-scaffold_243-1510915933:291691..291857Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:291247..291470TCONS_00054609-exon-scaffold_243-1510915933:291247..291470Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:290878..290953TCONS_00054609-exon-scaffold_243-1510915933:290878..290953Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:290463..290597TCONS_00054609-exon-scaffold_243-1510915933:290463..290597Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:289400..289533TCONS_00054609-exon-scaffold_243-1510915933:289400..289533Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1510915933:288224..288841TCONS_00054609-exon-scaffold_243-1510915933:288224..288841Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:294853..295121TCONS_00054609-exon-scaffold_243-1491911889:294853..295121Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:294478..294682TCONS_00054609-exon-scaffold_243-1491911889:294478..294682Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:292376..292460TCONS_00054609-exon-scaffold_243-1491911889:292376..292460Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:291691..291857TCONS_00054609-exon-scaffold_243-1491911889:291691..291857Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:291247..291470TCONS_00054609-exon-scaffold_243-1491911889:291247..291470Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:290878..290953TCONS_00054609-exon-scaffold_243-1491911889:290878..290953Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:290463..290597TCONS_00054609-exon-scaffold_243-1491911889:290463..290597Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:289400..289533TCONS_00054609-exon-scaffold_243-1491911889:289400..289533Clytia hemisphaericaexon
TCONS_00054609-exon-scaffold_243-1491911889:288224..288841TCONS_00054609-exon-scaffold_243-1491911889:288224..288841Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:288224..295121 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.3785	11.8921	9.52603	7.23938	16.2042	12.4576	0	2.15736	1.78924	2.71736	7.93457	5.02088	1.98925	0.33844	0.841474	0	1.34559	0.670056	0	0	6.18984	9.05799	9.51915	22.3387	6.88509	2.6973	2.77099	5.11266	30.5019	26.1602
Blast
[Close]
BLAST of TCONS_00054609 vs. Swiss-Prot (Human)
Match: CCNA2 (Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 9.350e-75
Identity = 140/284 (49.30%), Postives = 175/284 (61.62%), Query Frame = 1 
Query:  601 SFEDIDTDEVLPNILNIDQNTDSDFDVPEYAQDIHNYLKKAEMKFLPKRNYMEKQVDINKSMRSVLIDWLVEVAEEYKLNPQTLFLTVNYIDRFLSCMSVLRGKLQLVGTACMLVASKFEEIYPPEVSEFVYITDDTYTAKQVLRMESLVLKTLQFDVSVPTCKDFLNRYLLAAGAA------------------EESQLRYL-------------------SQTPTLQHYSGYTTFELKNCATDIRRFFANAPNLQQQAVQQKYKAPKFGCVSQLSPPQTLVL 1341
            SFE   T ++  +I+  D+   S  +VP+Y +DIH YL++ E+K  PK  YM+KQ DI  SMR++L+DWLVEV EEYKL  +TL L VNYIDRFLS MSVLRGKLQLVGTA ML+ASKFEEIYPPEV+EFVYITDDTYT KQVLRME LVLK L FD++ PT   FL +Y L    A                   +  L+YL                   S   +L   +GYT   LK C  D+ + +  AP   QQ++++KYK  K+  VS L+PP+TL L
Sbjct:  151 SFESPHTMDM--SIILEDEKPVSVNEVPDYHEDIHTYLREMEVKCKPKVGYMKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQSWPESLIRKTGYTLESLKPCLMDLHQTYLKAPQHAQQSIREKYKNSKYHGVSLLNPPETLNL 432
The following BLAST results are available for this feature:
BLAST of TCONS_00054609 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCNA29.350e-7549.30Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2[more]
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